MELO.jh031559.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh031559.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 6667114 .. 6668774 (-)
RNA-Seq ExpressionMELO.jh031559.1
SyntenyMELO.jh031559.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGCAATCTCCTCGCCGTCTTTCTTTTAGATCAGATTCTTCTTTTTAGAAATTTTACTATCCTTTGCGCGATTGTTCTTGATTTTGTATCATTTTTTTTTTGAAATTTTAGGAAATCTTGATTCATGTCACTTGTGCTGTAGATAATGTGGTAATGGGTCTGTGAGGATAAAATTATGAGGCTTGTTTCTCAAAACATTCGCAGTGGCCGCCTGAGAGCTTTCGCCTTCGCCGGGCTTGAGAGCTTCTGCTGTTTTTATCCTTCCTTGGATGTCTGAGACTCTAACGAACAATATGCGTTCTATTTTTTTTGTCTATTTAATCTAAATGCCTGGATTTTAAATTTTCTGTTTTCTATGAATTTTGGATTTGGGTTTTGAAATTTCCCCTGAAATTCTCTAGTTGGGACTTTGCGTCTGTCTCTTTAGTAGTGTTTTGAGTGCTTTAGGGATGAACAAAGTCCCACATATTCATATCCATCCTTTTCACTTTGTCAGCTCTTTCTTTTATGTCTTGCTGATCATTGTTGGATGGAAGATCTTCACTTTTGATAATCAATTTTACATGCTTGATTTTTATGACTTTTACCCTTTGGAGAACTCTTAACAATGATGATATCCTTAAGGCTTGTTTCTCAGAACATTCGCAGTGGCCGCCTGAGAGCTTTCGCCTTCGCCAGGCTTGAGAGCTATTGCTGCTTTTTTTCCTTCCTTGGATGTCTGAGTTTCTTATGTAAAATAAAACCCCATTTGATTTCTTTATACATTCACATTCACGATGTTGTTTTTATGTTATTTGGAATTCAGTGTCATGCCAAATTTCTAAGGCTGTTTTTTTTGTTAATGTGTTGATGGAAGTTCCTATCATCAAAAGAACATCCACCAAAAAACATTTATGGTTGTTTCTTGTTTCTTTAGTTCATTCTTTGGATTTAAAATGCTTGAATTCTCATATAACCTTACTGAATATGTGGGCTTTTACAGCATTGAAGTTGCCTGTTCCTTTGGGATCTTAATTTCTCTTAATTGGATTGGTATTCTTGCCAGAATGAAGCTGCAGATGGAATCGATATCAAATTCATCTTACTGATGGTATTAATGGTGGTCTGGACCAGTCAAAACTCGATGTATTCACCAAATTTATTTTTGAGGATCACTTTTTCTATGTACAATCATCGAATAGGACATCATAAATCACTTTTTTACTTCACAAATTTTCTTTTGAAAAATAGTTCAAATTTTTTAATAATAGGTTTCTCTAACTATTTATCTTTCTAGTTTCTCGATTCCCTTTGATAAATAATGTAGGAGAAGGAGATCCGTATGCCTGCCTGGAAAAGGAAGGAAAAGCAGGGGACCTAGTCAGCAGAACGAAAAGAGTAAGCTCGCCTTGTGACATTCATCAGATTGAGTATGGAATGATGAGGAAGTGGCTGGCGGCAGGGAAGTTGAGGAGCGAGAAGCTGCTCTTAGACCAGAAAAGTGTGCAGTTTCTCTCCTTACACAGTTACAATCTCTAAAGTATGACCAGCTGCTCTGTAATAAGTTTGTTTTAGCTATATTCTCTATTATGTACCCATATTAATGCCATCTGCTCTAGCTTTTCTTAGTTAACAAACAATTTCATTTTATATGTATAAAATGCCTTCTTTCTCCATAAAAA

mRNA sequence

TCGCAATCTCCTCGCCGTCTTTCTTTTAGATCAGATTCTTCTTTTTAGAAATTTTACTATCCTTTGCGCGATTGTTCTTGATTTTGTATCATTTTTTTTTTGAAATTTTAGGAAATCTTGATTCATGTCACTTGTGCTGTAGATAATGTGGTAATGGGTCTGTGAGGATAAAATTATGAGGCTTGTTTCTCAAAACATTCGCAGTGGCCGCCTGAGAGCTTTCGCCTTCGCCGGGCTTGAGAGCTTCTGCTGTTTTTATCCTTCCTTGGATGTCTGAGACTCTAACGAACAATATGCGTTCTATTTTTTTTGTCTATTTAATCTAAATGCCTGGATTTTAAATTTTCTGTTTTCTATGAATTTTGGATTTGGGTTTTGAAATTTCCCCTGAAATTCTCTAGTTGGGACTTTGCGTCTGTCTCTTTAGTAGTGTTTTGAGTGCTTTAGGGATGAACAAAGTCCCACATATTCATATCCATCCTTTTCACTTTGTCAGCTCTTTCTTTTATGTCTTGCTGATCATTGTTGGATGGAAGATCTTCACTTTTGATAATCAATTTTACATGCTTGATTTTTATGACTTTTACCCTTTGGAGAACTCTTAACAATGATGATATCCTTAAGGCTTGTTTCTCAGAACATTCGCAGTGGCCGCCTGAGAGCTTTCGCCTTCGCCAGGCTTGAGAGCTATTGCTGCTTTTTTTCCTTCCTTGGATGTCTGAGTTTCTTATGTAAAATAAAACCCCATTTGATTTCTTTATACATTCACATTCACGATGTTGTTTTTATGTTATTTGGAATTCAGTGTCATGCCAAATTTCTAAGGCTGTTTTTTTTGTTAATGTGTTGATGGAAGTTCCTATCATCAAAAGAACATCCACCAAAAAACATTTATGGTTGTTTCTTGTTTCTTTAGTTCATTCTTTGGATTTAAAATGCTTGAATTCTCATATAACCTTACTGAATATGTGGGCTTTTACAGCATTGAAGTTGCCTGTTCCTTTGGGATCTTAATTTCTCTTAATTGGATTGGTATTCTTGCCAGAATGAAGCTGCAGATGGAATCGATATCAAATTCATCTTACTGATGGTATTAATGGTGGTCTGGACCAGTCAAAACTCGATGTATTCACCAAATTTATTTTTGAGGATCACTTTTTCTATGTACAATCATCGAATAGGACATCATAAATCACTTTTTTACTTCACAAATTTTCTTTTGAAAAATAGTTCAAATTTTTTAATAATAGGTTTCTCTAACTATTTATCTTTCTAGTTTCTCGATTCCCTTTGATAAATAATGTAGGAGAAGGAGATCCGTATGCCTGCCTGGAAAAGGAAGGAAAAGCAGGGGACCTAGTCAGCAGAACGAAAAGAGTAAGCTCGCCTTGTGACATTCATCAGATTGAGTATGGAATGATGAGGAAGTGGCTGGCGGCAGGGAAGTTGAGGAGCGAGAAGCTGCTCTTAGACCAGAAAAGTGTGCAGTTTCTCTCCTTACACAGTTACAATCTCTAAAGTATGACCAGCTGCTCTGTAATAAGTTTGTTTTAGCTATATTCTCTATTATGTACCCATATTAATGCCATCTGCTCTAGCTTTTCTTAGTTAACAAACAATTTCATTTTATATGTATAAAATGCCTTCTTTCTCCATAAAAA

Coding sequence (CDS)

ATGATGATATCCTTAAGGCTTGTTTCTCAGAACATTCGCAGTGGCCGCCTGAGAGCTTTCGCCTTCGCCAGGCTTGAGAGCTATTGCTGCTTTTTTTCCTTCCTTGGATGTCTGAGTTTCTTATGTAAAATAAAACCCCATTTGATTTCTTTATACATTCACATTCACGATGTTGTTTTTATGTTATTTGGAATTCAGTGTCATGCCAAATTTCTAAGGCTGTTTTTTTTGTTAATGTGTTGA

Protein sequence

MMISLRLVSQNIRSGRLRAFAFARLESYCCFFSFLGCLSFLCKIKPHLISLYIHIHDVVFMLFGIQCHAKFLRLFFLLMC
Homology
[Close]
BLAST of MELO.jh031559.1 vs. NCBI nr
Match: OMO83705.1 (hypothetical protein COLO4_22373 [Corchorus olitorius])

HSP 1 Score: 58.9 bits (141), Expect = 2.28e-09
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 1  MMISLRLVSQNIRSGRLRAFAFARLESYCCF 31
          MMI+LRLVSQNIRSGRLRAFAFARLES+CCF
Sbjct: 1  MMINLRLVSQNIRSGRLRAFAFARLESFCCF 31

[Close]
BLAST of MELO.jh031559.1 vs. NCBI nr
Match: RDX81930.1 (hypothetical protein CR513_37340, partial [Mucuna pruriens])

HSP 1 Score: 53.1 bits (126), Expect = 7.19e-07
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 0 

Query: 7  LVSQNIRSGRLRAFAFARLESYCCFF 32
          LVSQNIRSGRLRAFAFARLESYCCF+
Sbjct: 61 LVSQNIRSGRLRAFAFARLESYCCFY 86

[Close]
BLAST of MELO.jh031559.1 vs. NCBI nr
Match: DAD40101.1 (TPA_asm: hypothetical protein HUJ06_014424 [Nelumbo nucifera])

HSP 1 Score: 50.4 bits (119), Expect = 2.48e-06
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 1  MMISLRLVSQNIRSGRLRAFAFARLESYCCF 31
          MM + RLVSQNIRSGRLRAFAFA LES CCF
Sbjct: 1  MMTNSRLVSQNIRSGRLRAFAFAGLESLCCF 31

[Close]
BLAST of MELO.jh031559.1 vs. NCBI nr
Match: DAD29652.1 (TPA_asm: hypothetical protein HUJ06_031121 [Nelumbo nucifera])

HSP 1 Score: 50.1 bits (118), Expect = 3.35e-06
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 0 

Query: 6  RLVSQNIRSGRLRAFAFARLESYCCF 31
          RLVSQNIRSGRLRAFAFA LES+CCF
Sbjct: 3  RLVSQNIRSGRLRAFAFAGLESFCCF 28

[Close]
BLAST of MELO.jh031559.1 vs. NCBI nr
Match: KAG5611889.1 (hypothetical protein H5410_023170 [Solanum commersonii])

HSP 1 Score: 50.8 bits (120), Expect = 5.53e-06
Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = 0 

Query: 5  LRLVSQNIRSGRLRAFAFARLESYCCFF 32
          LRLVSQNIRSGRL AFAFARLES CCF+
Sbjct: 57 LRLVSQNIRSGRLSAFAFARLESICCFY 84

[Close]
BLAST of MELO.jh031559.1 vs. ExPASy TrEMBL
Match: A0A1R3IMA2 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_22373 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.10e-09
Identity = 29/31 (93.55%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 1  MMISLRLVSQNIRSGRLRAFAFARLESYCCF 31
          MMI+LRLVSQNIRSGRLRAFAFARLES+CCF
Sbjct: 1  MMINLRLVSQNIRSGRLRAFAFARLESFCCF 31

[Close]
BLAST of MELO.jh031559.1 vs. ExPASy TrEMBL
Match: A0A371FUT8 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_37340 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.48e-07
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 0 

Query: 7  LVSQNIRSGRLRAFAFARLESYCCFF 32
          LVSQNIRSGRLRAFAFARLESYCCF+
Sbjct: 61 LVSQNIRSGRLRAFAFARLESYCCFY 86

[Close]
BLAST of MELO.jh031559.1 vs. ExPASy TrEMBL
Match: A0A2G3BE45 (Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_25589 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 9.02e-06
Identity = 23/31 (74.19%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 6  RLVSQNIRSGRLRAFAFARLESYCCFFSFLG 36
          +LVSQNIRSGRL AFAFARLES CCF+ ++ 
Sbjct: 18 KLVSQNIRSGRLSAFAFARLESICCFYPWMS 48

[Close]
BLAST of MELO.jh031559.1 vs. ExPASy TrEMBL
Match: K4BS99 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.40e-05
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 0 

Query: 6  RLVSQNIRSGRLRAFAFARLESYCCFFSFLG 36
          RLVSQNIRSGRL AFAFARLES CCF+ ++ 
Sbjct: 27 RLVSQNIRSGRLSAFAFARLESICCFYPWMS 57

[Close]
BLAST of MELO.jh031559.1 vs. ExPASy TrEMBL
Match: K7KRN4 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_05G230500 PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 3.06e-04
Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 0 

Query: 2  MISLRLVSQNIRSGRLRAFAFARLES 27
          MIS + VSQNIRSGRLRAFAFARLES
Sbjct: 27 MISFKAVSQNIRSGRLRAFAFARLES 52

The following BLAST results are available for this feature:
BLAST of MELO.jh031559.1 vs. NCBI nr
Match NameE-valueIdentityDescription
OMO83705.12.28e-0993.55hypothetical protein COLO4_22373 [Corchorus olitorius][more]
RDX81930.17.19e-0796.15hypothetical protein CR513_37340, partial [Mucuna pruriens][more]
DAD40101.12.48e-0683.87TPA_asm: hypothetical protein HUJ06_014424 [Nelumbo nucifera][more]
DAD29652.13.35e-0692.31TPA_asm: hypothetical protein HUJ06_031121 [Nelumbo nucifera][more]
KAG5611889.15.53e-0689.29hypothetical protein H5410_023170 [Solanum commersonii][more]
BLAST of MELO.jh031559.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh031559.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1R3IMA21.10e-0993.55Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_22373 PE=4 SV=1[more]
A0A371FUT83.48e-0796.15Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_37340 P... [more]
A0A2G3BE459.02e-0674.19Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_25589 PE=4 SV=1[more]
K4BS991.40e-0577.42Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1[more]
K7KRN43.06e-0488.46Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_05G230500 PE=4 SV=1[more]
BLAST of MELO.jh031559.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh031559.1.t1MELO.jh031559.1.t1mRNA