MELO.jh033386.1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh033386.1.t1
Type	mRNA
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Integrase catalytic domain-containing protein
Location	chr04: 29366476 .. 29367753 (+)
Sequence length	1278
RNA-Seq Expression	MELO.jh033386.1.t1
Synteny	MELO.jh033386.1.t1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTGACAGCCTTAATCATTTATGTCGATGACATGATAGTGACGGGAAATGACACACAAGAAATTGCAACTCTGGAAAAGAAACTCTCAGGTGAATTCGAGATGAAGAATTTGGGAGGATTGAAGTATTTTCTTGGAATTGAGGTAATGCGATCAAGACAAGGTATTGTATTATCTCAAAGAAAATACATTTTGGATCTACTCGCAGAGATTGGAATGCTGGACTGTAGACCAGCTGATACACCTGTAGTTCAAGGGGTTAAATTAGGAGAATTTCCAGACCAAGTACCAGCTAACAAAGAGAGGTACCAAAGGTTGGTAGGAAAGTTGATCTATCTAGCACATACAAGGCCGGATATAGCCTATGGGGTTAGTGTGGTAAGTCAGTTTATGCACAACCCAAGTGAAGACCACATGGACGCAGTCATGCGAATAATACGATATCTGAAGGGATGCCCAGGCAAGGGTATAACTTTCAAGAAGAATGGACACCTTGATGTTTCAGGTTTCACTGATGCTGATTGGGCAGGGAGTGTAAGTGATAGAAGGTCCACAGCAGGTTACTTTACCTTTGTCGGAGGTAATCTAGTAACTTGGAGAAGTAAGAAACAAAGTGTTGTAGCACTCTCTAGTGCAGAAGCTGAATTCAGAGGAGTTGCGAAGGGAATATGTGAATTATTGTGGTTGAGGAGGTTACTCGGAGAATTGGGATTCGCACCTACTCAGGCAATGGACTTATATTGTGACAGTCGACCTGCGATTGATATCTCTCACAACCCGGTACAGCATGACAGAACTAAACATGTGGAGATAGATCGACATTTTATAAAGGAGAAACTGGAATCAAATGTCATTCAGATGGTGCATGTGAGATCAGGGGAGCAACTCGCAGACATATTAACGAAGGCTGTCATGAGCAAAACGTTCACCAGCATAATTGACAAGTTAGGTATGCAAGATGCTTACATACCAACTTGAGGGGGAGTATTGGCATATGCAGCGATGTGTATCTTTTCAGAGATGGAAGGAATACCGCAATCATCCTAGAGAAGGAAGAGAATATCACATATTCAATTTTATTCTATATTTAGCAATGTATAGGATACAGAATATAGTGTGACAGATGTAATTTATTTTTTCCTAAGATAGCTACCATAGCTGATAAATAAGTGATAGAACATGAGAAGAAATGATCTGAATATTGTAATAGGTTTTAACCTCTGATCAATAATATCTGGGCGGGAGGGGAGATTCTTGGGAGTCTTGTGTTTTGTATTTA

mRNA sequence

AGTTGACAGCCTTAATCATTTATGTCGATGACATGATAGTGACGGGAAATGACACACAAGAAATTGCAACTCTGGAAAAGAAACTCTCAGGTGAATTCGAGATGAAGAATTTGGGAGGATTGAAGTATTTTCTTGGAATTGAGGTAATGCGATCAAGACAAGGTATTGTATTATCTCAAAGAAAATACATTTTGGATCTACTCGCAGAGATTGGAATGCTGGACTGTAGACCAGCTGATACACCTGTAGTTCAAGGGGTTAAATTAGGAGAATTTCCAGACCAAGTACCAGCTAACAAAGAGAGGTACCAAAGGTTGGTAGGAAAGTTGATCTATCTAGCACATACAAGGCCGGATATAGCCTATGGGGTTAGTGTGGTAAGTCAGTTTATGCACAACCCAAGTGAAGACCACATGGACGCAGTCATGCGAATAATACGATATCTGAAGGGATGCCCAGGCAAGGGTATAACTTTCAAGAAGAATGGACACCTTGATGTTTCAGGTTTCACTGATGCTGATTGGGCAGGGAGTGTAAGTGATAGAAGGTCCACAGCAGGTTACTTTACCTTTGTCGGAGGTAATCTAGTAACTTGGAGAAGTAAGAAACAAAGTGTTGTAGCACTCTCTAGTGCAGAAGCTGAATTCAGAGGAGTTGCGAAGGGAATATGTGAATTATTGTGGTTGAGGAGGTTACTCGGAGAATTGGGATTCGCACCTACTCAGGCAATGGACTTATATTGTGACAGTCGACCTGCGATTGATATCTCTCACAACCCGGTACAGCATGACAGAACTAAACATGTGGAGATAGATCGACATTTTATAAAGGAGAAACTGGAATCAAATGTCATTCAGATGGTGCATGTGAGATCAGGGGAGCAACTCGCAGACATATTAACGAAGGCTGTCATGAGCAAAACGTTCACCAGCATAATTGACAAGTTAGGTATGCAAGATGCTTACATACCAACTTGAGGGGGAGTATTGGCATATGCAGCGATGTGTATCTTTTCAGAGATGGAAGGAATACCGCAATCATCCTAGAGAAGGAAGAGAATATCACATATTCAATTTTATTCTATATTTAGCAATGTATAGGATACAGAATATAGTGTGACAGATGTAATTTATTTTTTCCTAAGATAGCTACCATAGCTGATAAATAAGTGATAGAACATGAGAAGAAATGATCTGAATATTGTAATAGGTTTTAACCTCTGATCAATAATATCTGGGCGGGAGGGGAGATTCTTGGGAGTCTTGTGTTTTGTATTTA

Coding sequence (CDS)

ATGATAGTGACGGGAAATGACACACAAGAAATTGCAACTCTGGAAAAGAAACTCTCAGGTGAATTCGAGATGAAGAATTTGGGAGGATTGAAGTATTTTCTTGGAATTGAGGTAATGCGATCAAGACAAGGTATTGTATTATCTCAAAGAAAATACATTTTGGATCTACTCGCAGAGATTGGAATGCTGGACTGTAGACCAGCTGATACACCTGTAGTTCAAGGGGTTAAATTAGGAGAATTTCCAGACCAAGTACCAGCTAACAAAGAGAGGTACCAAAGGTTGGTAGGAAAGTTGATCTATCTAGCACATACAAGGCCGGATATAGCCTATGGGGTTAGTGTGGTAAGTCAGTTTATGCACAACCCAAGTGAAGACCACATGGACGCAGTCATGCGAATAATACGATATCTGAAGGGATGCCCAGGCAAGGGTATAACTTTCAAGAAGAATGGACACCTTGATGTTTCAGGTTTCACTGATGCTGATTGGGCAGGGAGTGTAAGTGATAGAAGGTCCACAGCAGGTTACTTTACCTTTGTCGGAGGTAATCTAGTAACTTGGAGAAGTAAGAAACAAAGTGTTGTAGCACTCTCTAGTGCAGAAGCTGAATTCAGAGGAGTTGCGAAGGGAATATGTGAATTATTGTGGTTGAGGAGGTTACTCGGAGAATTGGGATTCGCACCTACTCAGGCAATGGACTTATATTGTGACAGTCGACCTGCGATTGATATCTCTCACAACCCGGTACAGCATGACAGAACTAAACATGTGGAGATAGATCGACATTTTATAAAGGAGAAACTGGAATCAAATGTCATTCAGATGGTGCATGTGAGATCAGGGGAGCAACTCGCAGACATATTAACGAAGGCTGTCATGAGCAAAACGTTCACCAGCATAATTGACAAGTTAGGTATGCAAGATGCTTACATACCAACTTGA

Protein sequence

MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEIGMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTSIIDKLGMQDAYIPT

Homology

[Close]

BLAST of MELO.jh033386.1.t1 vs. NCBI nr
Match: KAA0037867.1 (putative polyprotein (retrotrasposon protein) [Cucumis melo var. makuwa])

HSP 1 Score: 620 bits (1600), Expect = 2.67e-208
Identity = 311/314 (99.04%), Postives = 312/314 (99.36%), Query Frame = 0


Query: 1    MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
            MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFL IEVMRS+QGIVLSQRKYILDLLAEI
Sbjct: 1187 MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEI 1246

Query: 61   GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 120
            GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM
Sbjct: 1247 GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 1306

Query: 121  HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 180
            HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF
Sbjct: 1307 HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 1366

Query: 181  VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 240
            VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR
Sbjct: 1367 VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 1426

Query: 241  PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTS 300
            PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSK FTS
Sbjct: 1427 PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKMFTS 1486

Query: 301  IIDKLGMQDAYIPT 314
            IIDKLGMQDAYIPT
Sbjct: 1487 IIDKLGMQDAYIPT 1500

[Close]

BLAST of MELO.jh033386.1.t1 vs. NCBI nr
Match: TYK09814.1 (putative polyprotein (retrotrasposon protein) [Cucumis melo var. makuwa])

HSP 1 Score: 620 bits (1600), Expect = 2.67e-208
Identity = 310/314 (98.73%), Postives = 312/314 (99.36%), Query Frame = 0


Query: 1    MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
            MIV GNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRS+QGIVLSQRKYILDLLAEI
Sbjct: 1187 MIVMGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSKQGIVLSQRKYILDLLAEI 1246

Query: 61   GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 120
            GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM
Sbjct: 1247 GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 1306

Query: 121  HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 180
            HNPSEDHMDAVMRI+RYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF
Sbjct: 1307 HNPSEDHMDAVMRILRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 1366

Query: 181  VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 240
            VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR
Sbjct: 1367 VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 1426

Query: 241  PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTS 300
            PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSK FTS
Sbjct: 1427 PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKMFTS 1486

Query: 301  IIDKLGMQDAYIPT 314
            IIDKLGMQDAYIPT
Sbjct: 1487 IIDKLGMQDAYIPT 1500

[Close]

BLAST of MELO.jh033386.1.t1 vs. NCBI nr
Match: PRQ42441.1 (putative RNA-directed DNA polymerase [Rosa chinensis])

HSP 1 Score: 475 bits (1223), Expect = 1.46e-166
Identity = 231/314 (73.57%), Postives = 265/314 (84.39%), Query Frame = 0


Query: 1   MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
           MIVTGND +E+  LE  LS  FEMK+LGGLKYFLGIEV RS++GI LSQRKY++DLL E 
Sbjct: 1   MIVTGNDPEEVKKLEAHLSSVFEMKDLGGLKYFLGIEVARSKEGISLSQRKYVVDLLIET 60

Query: 61  GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 120
           G+L C+PADTP+ Q  KL E+PDQVP NKERYQRLVGKLIYL+HTR DIAY VSVVSQFM
Sbjct: 61  GLLACQPADTPMEQNHKLAEYPDQVPTNKERYQRLVGKLIYLSHTRLDIAYAVSVVSQFM 120

Query: 121 HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 180
           H PSEDHM AV RI+RYLK  PGKGI F KN H D++G+TDADWAGS++DRRST+GYFTF
Sbjct: 121 HAPSEDHMHAVHRILRYLKTNPGKGIMFSKNNHTDIAGYTDADWAGSITDRRSTSGYFTF 180

Query: 181 VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 240
           VGGNLVTWRSKKQ VVA SSAEAE+RG+A G+CE+LWLR L+ +LGF P  AM+LYCD++
Sbjct: 181 VGGNLVTWRSKKQKVVARSSAEAEYRGMAHGVCEMLWLRHLMKDLGFKPKHAMNLYCDNK 240

Query: 241 PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTS 300
            AIDI+HNPVQHDRTKHVE+DRHFIKEKLES  I M HVR+ +QLADILTKAV  K F S
Sbjct: 241 AAIDIAHNPVQHDRTKHVEVDRHFIKEKLESETINMPHVRTEDQLADILTKAVSGKVFHS 300

Query: 301 IIDKLGMQDAYIPT 314
            +DKLGM+D Y PT
Sbjct: 301 SLDKLGMRDIYSPT 314

[Close]

BLAST of MELO.jh033386.1.t1 vs. NCBI nr
Match: BBH07282.1 (ABC-2 type transporter family protein [Prunus dulcis])

HSP 1 Score: 480 bits (1236), Expect = 2.39e-166
Identity = 228/314 (72.61%), Postives = 274/314 (87.26%), Query Frame = 0


Query: 1   MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
           MI+TGND QEI+ L+  L+ EFEMK+LGGLKYFLGIEV RS+QGI LSQRKY+LDLL + 
Sbjct: 144 MIITGNDKQEISQLQDYLATEFEMKDLGGLKYFLGIEVARSQQGIFLSQRKYVLDLLTDT 203

Query: 61  GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 120
           GMLDC+PADTP+VQ   LGE+PDQVP NKERYQRLVG+LIYL+HTRPDIAY VSVVSQFM
Sbjct: 204 GMLDCKPADTPIVQNHHLGEYPDQVPTNKERYQRLVGRLIYLSHTRPDIAYAVSVVSQFM 263

Query: 121 HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 180
           H+PSEDHM+AV+RI+RYLK  PGKG+ F K+GHL++ G++DADWAG+V+DR+ST+GYFTF
Sbjct: 264 HSPSEDHMNAVLRILRYLKSAPGKGLMFSKHGHLNIDGYSDADWAGNVTDRKSTSGYFTF 323

Query: 181 VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 240
           VGGNLVTWRSKKQ+VVALSSAEAEFRG+ KGICELLWLR+LL ELG+ PT  M+L+CD++
Sbjct: 324 VGGNLVTWRSKKQNVVALSSAEAEFRGMTKGICELLWLRKLLTELGYKPTSTMNLFCDNK 383

Query: 241 PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTS 300
            AI I+ NPVQHDRTKHVE+DRHFIK+KLE+ V Q   V+S +QLADILTKA+ SK F +
Sbjct: 384 AAIAIAQNPVQHDRTKHVEVDRHFIKQKLEAKVFQFPFVKSEDQLADILTKAISSKAFHN 443

Query: 301 IIDKLGMQDAYIPT 314
            +D+LG+ D Y PT
Sbjct: 444 SLDQLGIGDIYAPT 457

[Close]

BLAST of MELO.jh033386.1.t1 vs. NCBI nr
Match: BBG95487.1 (aldose 1-epimerase family protein [Prunus dulcis])

HSP 1 Score: 474 bits (1221), Expect = 2.94e-166
Identity = 226/313 (72.20%), Postives = 272/313 (86.90%), Query Frame = 0


Query: 1   MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
           MI+TGND QEI+ L+  L+ EFEMK+LGGLKYFLGIEV RS+QGI LSQRKY+LDLL + 
Sbjct: 1   MIITGNDKQEISQLQDYLATEFEMKDLGGLKYFLGIEVARSQQGIFLSQRKYVLDLLTDT 60

Query: 61  GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 120
           GMLDC+PADTP+VQ   LGE+PDQV  NKERYQRLVG+LIYL+HTRPDIAY VSVVSQFM
Sbjct: 61  GMLDCKPADTPIVQNHHLGEYPDQVLTNKERYQRLVGRLIYLSHTRPDIAYAVSVVSQFM 120

Query: 121 HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 180
           H+PSEDHM+AV+RI+RYLK  PGKG+ F K+GHL++ G++DADWAG+V+DR+ST+GYFTF
Sbjct: 121 HSPSEDHMNAVLRILRYLKSAPGKGLMFSKHGHLNIDGYSDADWAGNVTDRKSTSGYFTF 180

Query: 181 VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 240
           VGGNLVTWRSKKQ+VVALSSAEAEFRG+ KGICELLWLR+LL ELG+ PT  M+L+CD++
Sbjct: 181 VGGNLVTWRSKKQNVVALSSAEAEFRGMTKGICELLWLRKLLTELGYKPTSTMNLFCDNK 240

Query: 241 PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTS 300
            AI I+ NPVQHDRTKHVE+DRHFIK+KLE+ V Q   V+S +QLADILTKA+ SK F +
Sbjct: 241 AAIAIAQNPVQHDRTKHVEVDRHFIKQKLEAKVFQFPFVKSEDQLADILTKAISSKAFHN 300

Query: 301 IIDKLGMQDAYIP 313
            +D+LG+ D Y P
Sbjct: 301 SLDQLGIGDIYAP 313

[Close]

BLAST of MELO.jh033386.1.t1 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.9e-68
Identity = 133/307 (43.32%), Postives = 185/307 (60.26%), Query Frame = 0


Query: 1    MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
            +++TGND   +      LS  F +K+   L YFLGIE  R   G+ LSQR+YILDLLA  
Sbjct: 1154 ILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLART 1213

Query: 61   GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 120
             M+  +P  TP+    KL  +      +   Y+ +VG L YLA TRPDI+Y V+ +SQFM
Sbjct: 1214 NMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFM 1273

Query: 121  HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 180
            H P+E+H+ A+ RI+RYL G P  GI  KK   L +  ++DADWAG   D  ST GY  +
Sbjct: 1274 HMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVY 1333

Query: 181  VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 240
            +G + ++W SKKQ  V  SS EAE+R VA    E+ W+  LL ELG   T+   +YCD+ 
Sbjct: 1334 LGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNV 1393

Query: 241  PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTS 300
             A  +  NPV H R KH+ ID HFI+ +++S  +++VHV + +QLAD LTK +    F +
Sbjct: 1394 GATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQN 1453

Query: 301  IIDKLGM 308
               K+G+
Sbjct: 1454 FASKIGV 1460

[Close]

BLAST of MELO.jh033386.1.t1 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 5.5e-66
Identity = 131/307 (42.67%), Postives = 183/307 (59.61%), Query Frame = 0


Query: 1    MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
            +++TGNDT  +      LS  F +K    L YFLGIE  R  QG+ LSQR+Y LDLLA  
Sbjct: 1137 ILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLART 1196

Query: 61   GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 120
             ML  +P  TP+    KL         +   Y+ +VG L YLA TRPD++Y V+ +SQ+M
Sbjct: 1197 NMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYM 1256

Query: 121  HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 180
            H P++DH +A+ R++RYL G P  GI  KK   L +  ++DADWAG   D  ST GY  +
Sbjct: 1257 HMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVY 1316

Query: 181  VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 240
            +G + ++W SKKQ  V  SS EAE+R VA    EL W+  LL ELG   +    +YCD+ 
Sbjct: 1317 LGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNV 1376

Query: 241  PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTS 300
             A  +  NPV H R KH+ +D HFI+ +++S  +++VHV + +QLAD LTK +    F +
Sbjct: 1377 GATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQN 1436

Query: 301  IIDKLGM 308
               K+G+
Sbjct: 1437 FSRKIGV 1443

[Close]

BLAST of MELO.jh033386.1.t1 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.1e-53
Identity = 123/317 (38.80%), Postives = 191/317 (60.25%), Query Frame = 0


Query: 1    MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSR--QGIVLSQRKYILDLLA 60
            M++ G D   IA L+  LS  F+MK+LG  +  LG++++R R  + + LSQ KYI  +L 
Sbjct: 1012 MLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLE 1071

Query: 61   EIGMLDCRPADTPVVQGVKLGE--FPDQVPAN----KERYQRLVGKLIY-LAHTRPDIAY 120
               M + +P  TP+   +KL +   P  V       K  Y   VG L+Y +  TRPDIA+
Sbjct: 1072 RFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAH 1131

Query: 121  GVSVVSQFMHNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDR 180
             V VVS+F+ NP ++H +AV  I+RYL+G  G  + F  +  + + G+TDAD AG + +R
Sbjct: 1132 AVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI-LKGYTDADMAGDIDNR 1191

Query: 181  RSTAGY-FTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPT 240
            +S+ GY FTF GG  ++W+SK Q  VALS+ EAE+    +   E++WL+R L ELG    
Sbjct: 1192 KSSTGYLFTFSGG-AISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQK 1251

Query: 241  QAMDLYCDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILT 300
            + + +YCDS+ AID+S N + H RTKH+++  H+I+E ++   ++++ + + E  AD+LT
Sbjct: 1252 EYV-VYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLT 1311

Query: 301  KAVMSKTFTSIIDKLGM 308
            K V    F    + +GM
Sbjct: 1312 KVVPRNKFELCKELVGM 1325

[Close]

BLAST of MELO.jh033386.1.t1 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 187.6 bits (475), Expect = 2.2e-46
Identity = 101/311 (32.48%), Postives = 172/311 (55.31%), Query Frame = 0


Query: 1    MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
            +++   D   +   ++ L  +F M +L  +K+F+GI +      I LSQ  Y+  +L++ 
Sbjct: 1091 VVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKF 1150

Query: 61   GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIY-LAHTRPDIAYGVSVVSQF 120
             M +C    TP+   +           N    + L+G L+Y +  TRPD+   V+++S++
Sbjct: 1151 NMENCNAVSTPLPSKINYELLNSDEDCNTP-CRSLIGCLMYIMLCTRPDLTTAVNILSRY 1210

Query: 121  MHNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLD--VSGFTDADWAGSVSDRRSTAGY 180
                + +    + R++RYLKG     + FKKN   +  + G+ D+DWAGS  DR+ST GY
Sbjct: 1211 SSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGY 1270

Query: 181  -FTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLY 240
             F     NL+ W +K+Q+ VA SS EAE+  + + + E LWL+ LL  +       + +Y
Sbjct: 1271 LFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIY 1330

Query: 241  CDSRPAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSK 300
             D++  I I++NP  H R KH++I  HF +E++++NVI + ++ +  QLADI TK + + 
Sbjct: 1331 EDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAA 1390

Query: 301  TFTSIIDKLGM 308
             F  + DKLG+
Sbjct: 1391 RFVELRDKLGL 1400

[Close]

BLAST of MELO.jh033386.1.t1 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.3e-43
Identity = 91/221 (41.18%), Postives = 133/221 (60.18%), Query Frame = 0


Query: 1   MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
           +++TG+    +  L  +LS  F MK+LG + YFLGI++     G+ LSQ KY   +L   
Sbjct: 10  ILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNA 69

Query: 61  GMLDCRPADTPVV----QGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVV 120
           GMLDC+P  TP+       V   ++PD  P++   ++ +VG L YL  TRPDI+Y V++V
Sbjct: 70  GMLDCKPMSTPLPLKLNSSVSTAKYPD--PSD---FRSIVGALQYLTLTRPDISYAVNIV 129

Query: 121 SQFMHNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAG 180
            Q MH P+    D + R++RY+KG    G+   KN  L+V  F D+DWAG  S RRST G
Sbjct: 130 CQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTG 189

Query: 181 YFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLW 218
           + TF+G N+++W +K+Q  V+ SS E E+R +A    EL W
Sbjct: 190 FCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of MELO.jh033386.1.t1 vs. ExPASy TrEMBL
Match: A0A5A7T8G9 (Putative polyprotein (Retrotrasposon protein) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00310 PE=4 SV=1)

HSP 1 Score: 620 bits (1600), Expect = 1.29e-208
Identity = 311/314 (99.04%), Postives = 312/314 (99.36%), Query Frame = 0


Query: 1    MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
            MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFL IEVMRS+QGIVLSQRKYILDLLAEI
Sbjct: 1187 MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLRIEVMRSKQGIVLSQRKYILDLLAEI 1246

Query: 61   GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 120
            GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM
Sbjct: 1247 GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 1306

Query: 121  HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 180
            HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF
Sbjct: 1307 HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 1366

Query: 181  VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 240
            VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR
Sbjct: 1367 VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 1426

Query: 241  PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTS 300
            PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSK FTS
Sbjct: 1427 PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKMFTS 1486

Query: 301  IIDKLGMQDAYIPT 314
            IIDKLGMQDAYIPT
Sbjct: 1487 IIDKLGMQDAYIPT 1500

[Close]

BLAST of MELO.jh033386.1.t1 vs. ExPASy TrEMBL
Match: A0A5D3CF38 (Putative polyprotein (Retrotrasposon protein) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G001130 PE=4 SV=1)

HSP 1 Score: 620 bits (1600), Expect = 1.29e-208
Identity = 310/314 (98.73%), Postives = 312/314 (99.36%), Query Frame = 0


Query: 1    MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
            MIV GNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRS+QGIVLSQRKYILDLLAEI
Sbjct: 1187 MIVMGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSKQGIVLSQRKYILDLLAEI 1246

Query: 61   GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 120
            GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM
Sbjct: 1247 GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 1306

Query: 121  HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 180
            HNPSEDHMDAVMRI+RYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF
Sbjct: 1307 HNPSEDHMDAVMRILRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 1366

Query: 181  VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 240
            VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR
Sbjct: 1367 VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 1426

Query: 241  PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTS 300
            PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSK FTS
Sbjct: 1427 PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKMFTS 1486

Query: 301  IIDKLGMQDAYIPT 314
            IIDKLGMQDAYIPT
Sbjct: 1487 IIDKLGMQDAYIPT 1500

[Close]

BLAST of MELO.jh033386.1.t1 vs. ExPASy TrEMBL
Match: A0A2N9GAX7 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24502 PE=4 SV=1)

HSP 1 Score: 491 bits (1264), Expect = 3.01e-169
Identity = 233/314 (74.20%), Postives = 277/314 (88.22%), Query Frame = 0


Query: 1   MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
           MI+TG+D +EI+ L+++LS EFEMKNLGGLKYFLGIEV RSRQGI LSQRKY+LDLL+E+
Sbjct: 258 MIITGDDAEEISRLQEQLSTEFEMKNLGGLKYFLGIEVARSRQGIFLSQRKYVLDLLSEV 317

Query: 61  GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 120
           G+L+C+PADTP+V   KLGE+ DQVPA+KERYQRLVGKLIYL+HTRPDIAY VSVVSQFM
Sbjct: 318 GLLECKPADTPIVPNHKLGEYTDQVPADKERYQRLVGKLIYLSHTRPDIAYAVSVVSQFM 377

Query: 121 HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 180
           H PSEDHMDAV+RI+RYLK  PGKG+ F KN HL+V G+TDADWAG++SDR+ST+GYFTF
Sbjct: 378 HCPSEDHMDAVIRILRYLKSSPGKGLMFSKNNHLNVDGYTDADWAGNISDRKSTSGYFTF 437

Query: 181 VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 240
           VGGNLVTWRSKKQ VVALSSAEAEFRG+AKG+CELLWLRRLL E+GFAP+  M+L+CD++
Sbjct: 438 VGGNLVTWRSKKQKVVALSSAEAEFRGMAKGLCELLWLRRLLAEIGFAPSSEMNLFCDNK 497

Query: 241 PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTS 300
            AIDISHNPVQHDRTKHVE+DRHFIK  LE  +I+   V+S +QLADILTKAV ++ F  
Sbjct: 498 AAIDISHNPVQHDRTKHVEVDRHFIKHNLEEKIIRFPFVKSEDQLADILTKAVSTRNFYD 557

Query: 301 IIDKLGMQDAYIPT 314
            +DKLG++D Y PT
Sbjct: 558 SLDKLGIRDIYAPT 571

[Close]

BLAST of MELO.jh033386.1.t1 vs. ExPASy TrEMBL
Match: A0A2N9FKM1 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15610 PE=4 SV=1)

HSP 1 Score: 481 bits (1239), Expect = 3.52e-168
Identity = 229/314 (72.93%), Postives = 275/314 (87.58%), Query Frame = 0


Query: 1   MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
           MI+TG+D +EI+ L+++LS EFEMKNLGGLKYFLGIEV RSRQGI LSQRKY+LDLL+E+
Sbjct: 74  MIITGDDAEEISRLQEQLSTEFEMKNLGGLKYFLGIEVARSRQGIFLSQRKYVLDLLSEV 133

Query: 61  GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 120
           G+L+C+P DTP+V   KLGE+ DQV A+KERYQRLVGKLIYL+HTRPDIAY VSVVSQ M
Sbjct: 134 GLLECKPTDTPIVPNHKLGEYTDQVLADKERYQRLVGKLIYLSHTRPDIAYAVSVVSQVM 193

Query: 121 HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 180
           H PSEDHMDAV+RI+RYLK  PGKG+ F KN HL+V G+TDADWAG++SDR+ST+GYFTF
Sbjct: 194 HCPSEDHMDAVIRILRYLKSSPGKGLMFSKNNHLNVDGYTDADWAGNISDRKSTSGYFTF 253

Query: 181 VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 240
           VGGNLVTWRSKKQ VVALSSAEAEFRG+AKG+CELLWLRRLL E+GFAP+  M+L+CD++
Sbjct: 254 VGGNLVTWRSKKQKVVALSSAEAEFRGMAKGLCELLWLRRLLTEIGFAPSSEMNLFCDNK 313

Query: 241 PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTS 300
            AIDISHNPVQHDRTKHVE+DRHFIK  LE  +I+   V+S +QLADILTKA+ ++ F +
Sbjct: 314 AAIDISHNPVQHDRTKHVEVDRHFIKHNLEEKIIRFPFVKSEDQLADILTKAMSTRNFYN 373

Query: 301 IIDKLGMQDAYIPT 314
            +DKLG++D Y PT
Sbjct: 374 SLDKLGIRDIYAPT 387

[Close]

BLAST of MELO.jh033386.1.t1 vs. ExPASy TrEMBL
Match: A0A2N9J197 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58864 PE=4 SV=1)

HSP 1 Score: 491 bits (1264), Expect = 1.15e-167
Identity = 233/314 (74.20%), Postives = 277/314 (88.22%), Query Frame = 0


Query: 1   MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
           MI+TG+D +EI+ L+++LS EFEMKNLGGLKYFLGIEV RSRQGI LSQRKY+LDLL+E+
Sbjct: 372 MIITGDDAEEISRLQEQLSTEFEMKNLGGLKYFLGIEVARSRQGIFLSQRKYVLDLLSEV 431

Query: 61  GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 120
           G+L+C+PADTP+V   KLGE+ DQVPA+KERYQRLVGKLIYL+HTRPDIAY VSVVSQFM
Sbjct: 432 GLLECKPADTPIVPNHKLGEYTDQVPADKERYQRLVGKLIYLSHTRPDIAYAVSVVSQFM 491

Query: 121 HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 180
           H PSEDHMDAV+RI+RYLK  PGKG+ F KN HL+V G+TDADWAG++SDR+ST+GYFTF
Sbjct: 492 HCPSEDHMDAVIRILRYLKSSPGKGLMFSKNNHLNVDGYTDADWAGNISDRKSTSGYFTF 551

Query: 181 VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 240
           VGGNLVTWRSKKQ VVALSSAEAEFRG+AKG+CELLWLRRLL E+GFAP+  M+L+CD++
Sbjct: 552 VGGNLVTWRSKKQKVVALSSAEAEFRGMAKGLCELLWLRRLLAEIGFAPSSEMNLFCDNK 611

Query: 241 PAIDISHNPVQHDRTKHVEIDRHFIKEKLESNVIQMVHVRSGEQLADILTKAVMSKTFTS 300
            AIDISHNPVQHDRTKHVE+DRHFIK  LE  +I+   V+S +QLADILTKAV ++ F  
Sbjct: 612 AAIDISHNPVQHDRTKHVEVDRHFIKHNLEEKIIRFPFVKSEDQLADILTKAVSTRNFYD 671

Query: 301 IIDKLGMQDAYIPT 314
            +DKLG++D Y PT
Sbjct: 672 SLDKLGIRDIYAPT 685

[Close]

BLAST of MELO.jh033386.1.t1 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 217.6 bits (553), Expect = 1.4e-56
Identity = 107/268 (39.93%), Postives = 166/268 (61.94%), Query Frame = 0


Query: 1   MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
           +I+  N+   +  L+ +L   F++++LG LKYFLG+E+ RS  GI + QRKY LDLL E 
Sbjct: 287 IIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDET 346

Query: 61  GMLDCRPADTPVVQGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVVSQFM 120
           G+L C+P+  P+   V           + + Y+RL+G+L+YL  TR DI++ V+ +SQF 
Sbjct: 347 GLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFS 406

Query: 121 HNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAGYFTF 180
             P   H  AVM+I+ Y+KG  G+G+ +     + +  F+DA +      RRST GY  F
Sbjct: 407 EAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMF 466

Query: 181 VGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLWLRRLLGELGFAPTQAMDLYCDSR 240
           +G +L++W+SKKQ VV+ SSAEAE+R ++    E++WL +   EL    ++   L+CD+ 
Sbjct: 467 LGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNT 526

Query: 241 PAIDISHNPVQHDRTKHVEIDRHFIKEK 269
            AI I+ N V H+RTKH+E D H ++E+
Sbjct: 527 AAIHIATNAVFHERTKHIESDCHSVRER 554

[Close]

BLAST of MELO.jh033386.1.t1 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-44
Identity = 91/221 (41.18%), Postives = 133/221 (60.18%), Query Frame = 0


Query: 1   MIVTGNDTQEIATLEKKLSGEFEMKNLGGLKYFLGIEVMRSRQGIVLSQRKYILDLLAEI 60
           +++TG+    +  L  +LS  F MK+LG + YFLGI++     G+ LSQ KY   +L   
Sbjct: 10  ILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNA 69

Query: 61  GMLDCRPADTPVV----QGVKLGEFPDQVPANKERYQRLVGKLIYLAHTRPDIAYGVSVV 120
           GMLDC+P  TP+       V   ++PD  P++   ++ +VG L YL  TRPDI+Y V++V
Sbjct: 70  GMLDCKPMSTPLPLKLNSSVSTAKYPD--PSD---FRSIVGALQYLTLTRPDISYAVNIV 129

Query: 121 SQFMHNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGFTDADWAGSVSDRRSTAG 180
            Q MH P+    D + R++RY+KG    G+   KN  L+V  F D+DWAG  S RRST G
Sbjct: 130 CQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTG 189

Query: 181 YFTFVGGNLVTWRSKKQSVVALSSAEAEFRGVAKGICELLW 218
           + TF+G N+++W +K+Q  V+ SS E E+R +A    EL W
Sbjct: 190 FCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of MELO.jh033386.1.t1 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 66.6 bits (161), Expect = 4.0e-11
Identity = 29/82 (35.37%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 100 IYLAHTRPDIAYGVSVVSQFMHNPSEDHMDAVMRIIRYLKGCPGKGITFKKNGHLDVSGF 159
           +YL  TRPD+ + V+ +SQF        M AV +++ Y+KG  G+G+ +     L +  F
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 160 TDADWAGSVSDRRSTAGYFTFV 182
            D+DWA     RRS  G+ + V
Sbjct: 61  ADSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of MELO.jh033386.1.t1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037867.1	2.67e-208	99.04	putative polyprotein (retrotrasposon protein) [Cucumis melo var. makuwa]	[more]
TYK09814.1	2.67e-208	98.73	putative polyprotein (retrotrasposon protein) [Cucumis melo var. makuwa]	[more]
PRQ42441.1	1.46e-166	73.57	putative RNA-directed DNA polymerase [Rosa chinensis]	[more]
BBH07282.1	2.39e-166	72.61	ABC-2 type transporter family protein [Prunus dulcis]	[more]
BBG95487.1	2.94e-166	72.20	aldose 1-epimerase family protein [Prunus dulcis]	[more]

BLAST of MELO.jh033386.1.t1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	5.9e-68	43.32	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	5.5e-66	42.67	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	1.1e-53	38.80	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.2e-46	32.48	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	2.3e-43	41.18	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MELO.jh033386.1.t1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T8G9	1.29e-208	99.04	Putative polyprotein (Retrotrasposon protein) OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3CF38	1.29e-208	98.73	Putative polyprotein (Retrotrasposon protein) OS=Cucumis melo var. makuwa OX=119...	[more]
A0A2N9GAX7	3.01e-169	74.20	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic...	[more]
A0A2N9FKM1	3.52e-168	72.93	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic...	[more]
A0A2N9J197	1.15e-167	74.20	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic...	[more]

BLAST of MELO.jh033386.1.t1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.4e-56	39.93	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.6e-44	41.18	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	4.0e-11	35.37	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1..72 e-value: 4.9E-12 score: 46.0
None	No IPR available	PANTHER	PTHR11439:SF352	SUBFAMILY NOT NAMED	coord: 87..225
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 87..225
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 158..293 e-value: 2.64028E-78 score: 233.129
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 14..261

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO.jh033386.1	MELO.jh033386.1	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO.jh033386.1.t1.exon	MELO.jh033386.1.t1.exon	exon

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO.jh033386.1.t1.start_codon	MELO.jh033386.1.t1.start_codon	start_codon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO.jh033386.1.t1.cds	MELO.jh033386.1.t1.cds	CDS

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO.jh033386.1.t1.stop_codon	MELO.jh033386.1.t1.stop_codon	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO.jh033386.1.t1	MELO.jh033386.1.t1-protein	polypeptide