Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTGCAATGGTGGTCGCGCGACTTGGTTAGACATATCTTGGTAGTTGTAGTCTTCAGAGTTGGAGATTCGTGGATGGTGGTGAAGACTAAGCACGGTGGTGGTGAGGACTGTACAAGAGGACGGTGGTCACGAGGTCTGGACACGATTGGTGTGGCCGCATCTGTTTAA mRNA sequence ATGGTGCAATGGTGGTCGCGCGACTTGGTTAGACATATCTTGGTAGTTGTAGTCTTCAGAGTTGGAGATTCGTGGATGGTGGTGAAGACTAAGCACGGTGGTGGTGAGGACTGTACAAGAGGACGGTGGTCACGAGGTCTGGACACGATTGGTGTGGCCGCATCTGTTTAA Coding sequence (CDS) ATGGTGCAATGGTGGTCGCGCGACTTGGTTAGACATATCTTGGTAGTTGTAGTCTTCAGAGTTGGAGATTCGTGGATGGTGGTGAAGACTAAGCACGGTGGTGGTGAGGACTGTACAAGAGGACGGTGGTCACGAGGTCTGGACACGATTGGTGTGGCCGCATCTGTTTAA Protein sequence MVQWWSRDLVRHILVVVVFRVGDSWMVVKTKHGGGEDCTRGRWSRGLDTIGVAASV
Homology
BLAST of MELO3C030459.jh1.t1 vs. NCBI nr
Match: KAA0063488.1 (hypothetical protein E6C27_scaffold977G00790 [Cucumis melo var. makuwa]) HSP 1 Score: 117 bits (292), Expect = 2.62e-32 Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0 Query: 1 MVQWWSRDLVRHILVVVVFRVGDSWMVVKTKHGGGEDCTRGRWSRGLDTIGVAASV 56 MVQWWSRDLV+HILVVVVFRVGDSWMVVKTKHGGGEDCTRG WSRGLDTIGVAASV Sbjct: 54 MVQWWSRDLVKHILVVVVFRVGDSWMVVKTKHGGGEDCTRGWWSRGLDTIGVAASV 109
BLAST of MELO3C030459.jh1.t1 vs. ExPASy TrEMBL
Match: A0A5A7V7C6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00790 PE=4 SV=1) HSP 1 Score: 117 bits (292), Expect = 1.27e-32 Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0 Query: 1 MVQWWSRDLVRHILVVVVFRVGDSWMVVKTKHGGGEDCTRGRWSRGLDTIGVAASV 56 MVQWWSRDLV+HILVVVVFRVGDSWMVVKTKHGGGEDCTRG WSRGLDTIGVAASV Sbjct: 54 MVQWWSRDLVKHILVVVVFRVGDSWMVVKTKHGGGEDCTRGWWSRGLDTIGVAASV 109
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0063488.1 | 2.62e-32 | 96.43 | hypothetical protein E6C27_scaffold977G00790 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7V7C6 | 1.27e-32 | 96.43 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
MELO3C030459.jh1.t1.exon | MELO3C030459.jh1.t1.exon | exon |
The following start_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
MELO3C030459.jh1.t1.start_codon | MELO3C030459.jh1.t1.start_codon | start_codon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
MELO3C030459.jh1.t1.cds | MELO3C030459.jh1.t1.cds | CDS |
The following stop_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
MELO3C030459.jh1.t1.stop_codon | MELO3C030459.jh1.t1.stop_codon | stop_codon |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
MELO3C030459.jh1.t1 | MELO3C030459.jh1.t1-protein | polypeptide |
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