Cp4.1LG11g02090 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g02090
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CBS domain-containing protein CBSX3, mitochondrial-like
Location	Cp4.1LG11: 1128126 .. 1130316 (+)
RNA-Seq Expression	Cp4.1LG11g02090
Synteny	Cp4.1LG11g02090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGCGATCGTGAGAGCATTACGATCGTGGCAAGAGACGTTGAAGATCGCGAACTCGCAGCACTCGTGTAGGAGAGAAACGAATCAAGTGGAAAAGATTTTGGAAGGATCAGAATCAAGAGGGTCGTCTTCTCCACTGAAAGGTTTGGAGAATATTACCGTGGCGGAGATCGTTTCGAGAAATGGAGATGGAAGTATTGGCTCCTCGTGGTTATCCTGCAGTGCGGATGATGCGGCCATTGATACCGTGCAAAATGTAGCGAGTTTGATTCGGTTTCGCCATTTCCAAAAAGCTCGAAAGCTTTTCTTGTTGAGAAGATTGAGGAAATTTTCTTTGCTGCAGATGGCTAGAAACAACGTTGGATCGTTGGTGGTGTTGAAGCCTGAAGGACAACAAATCGCCGGAATTGTAACGGAAGGAGGTAACTGAAATGCTGATAGTATAGGAAAATATTACAAATGCTGATAGTAATAGGAAAATATCATGACATTGTAGAGAGGTTGATATGAACATCTTATCACAGATTCGTAGTAATAACTTCTCCCTTCGTGATAGTTAGGGTTTTTGTTGCCTTTTTGCTTACATTCCCATATAACACCAACACCAATAGAAATCTCTTTACACTCTCTTTTGAAATCTTTCTACACCAATCGAAATCTCTCTACACTCTCTTTTGAAATCTTTCTACACTCTCTTTTGAAATCTCTCTAACCCATTTTCTAAAACTTTCTTCTTGAATCGGGGCTAGAGGCTCGACCCTGTTTGCTAGAACTTTCTTCTTGAACCGGGGCTAGAGGTTCGACCTTGTTTTCTAGAACTTTCTTCTTGAACCGGGGCTAGAGGCTCGACCCCGTTTTCTAAAACTTTCTTCTTGAACCGGGGCTAGAGGCTCGACCCCGTTTTCTAAAACTTTCTTCTTGAACCAGGGCTAGAGGCTCGACCCCGTTTTCTAAAACTTTCTTCTTGAACTGAGGCAGAGACTCGAGCATACGTCGCTTCTACATTCTCTTTCGAAATCTCTCTACCCCATTTTCTAAAACTTTTTTCTTGAACCGGGGCCAGAGGCTCGACCCCGTTTTCTAGAACTTCCTTCTTGAACTGGGGCCAGAGGCTTAATCCCGTTTTCTAAAACTTCCTTCTTGAACCGAGGCCAGAGGCTCGGGCATACGTCGCTTGACCGTAAGCGACGCAAGAACAAATAGACTTAACTCACTTGTTGCTGAGAAATGAGTATCGCACAATCAAAAGTTCACTACCATGAAAGTGTGATTGTGACACGAGGTATACTTAATTTTTGCATTTTTTCACCACATCGAACATACCATTGACCCATAGGCATTATCCAATATGTTTGAGTCATAGAACGAGCATACTAATGAGAAAGTTTGAAGATACAAAAAAATTACACGTAAAGCATTATAGATTAAAATTTAAAATTATGATGGGTTCCTCAAAAAAAGAAAATTTATAACAATTTTGCCTTCCATCTAAAACACATTTGAATTCTAAGCAAATTCCAAAAATTAAATCAAGATTTTAAAAAAAATTGTTCTCTATTCCATGAATATTAACTTGGTAATTGCCGTATTTTTATGGTCCTCCTAACCAGACTATCTGAAGAAGATAATAGCAGATGGGAGATGTCCCATATACACAAAAGTTGGGGAAATAATGACTTGTGAGGTTATTTTCTGTCTTCCCTCAGCTACAAAACCAGATTACAAACAACAGTTCTCACTAACACATTTTTATTTTTCACGAACAGGACAAACTAGTAACCGTTACGTCCGACACGAACATCCTTAAAGCAATGCAGCTTATGACAGGTAAAAATACTAAGAACAGTGTCCTCTAGATTCTGAATTTACCATATAAAATGTAAGTCAGCTCCTTCTCCAGCTGCATCAACGACCATCTAAGAAGAGAATAATCTAGATGAAGTTCTTGGCATTTGCAGAGAATCGCATAAGACATGTTCCTGTGATAGATGGCAAACTAGTTGGCATGATTTCTGTAGTAGATGTTGTCAAAGCAGTGGTAAAGCAGCAAAATGGGGAACTCGAGCGACTAAACGAGTATATAAAAGGAGAATCGTACTAAAAATCGAGTTCTAAACATTTAAGAACACATGATTCAGTACTACTGTAACAGCAAGCATGCTTTATTGAGAGACAAGAGCCTGATAGTG

mRNA sequence

ATGCAGGCGATCGTGAGAGCATTACGATCGTGGCAAGAGACGTTGAAGATCGCGAACTCGCAGCACTCGTGTAGGAGAGAAACGAATCAAGTGGAAAAGATTTTGGAAGGATCAGAATCAAGAGGGTCGTCTTCTCCACTGAAAGGTTTGGAGAATATTACCGTGGCGGAGATCGTTTCGAGAAATGGAGATGGAAGTATTGGCTCCTCGTGGTTATCCTGCAGTGCGGATGATGCGGCCATTGATACCGTGCAAAATGTAGCGAGTTTGATTCGGTTTCGCCATTTCCAAAAAGCTCGAAAGCTTTTCTTGTTGAGAAGATTGAGGAAATTTTCTTTGCTGCAGATGGCTAGAAACAACGTTGGATCGTTGGTGGTGTTGAAGCCTGAAGGACAACAAATCGCCGGAATTGTAACGGAAGGAGACTATCTGAAGAAGATAATAGCAGATGGGAGATGTCCCATATACACAAAAGTTGGGGAAATAATGACTTGTGAGGACAAACTAGTAACCGTTACGTCCGACACGAACATCCTTAAAGCAATGCAGCTTATGACAGAGAATCGCATAAGACATGTTCCTGTGATAGATGGCAAACTAGTTGGCATGATTTCTGTAGTAGATGTTGTCAAAGCAGTGGTAAAGCAGCAAAATGGGGAACTCGAGCGACTAAACGAGTATATAAAAGGAGAATCGTACTAAAAATCGAGTTCTAAACATTTAAGAACACATGATTCAGTACTACTGTAACAGCAAGCATGCTTTATTGAGAGACAAGAGCCTGATAGTG

Coding sequence (CDS)

ATGCAGGCGATCGTGAGAGCATTACGATCGTGGCAAGAGACGTTGAAGATCGCGAACTCGCAGCACTCGTGTAGGAGAGAAACGAATCAAGTGGAAAAGATTTTGGAAGGATCAGAATCAAGAGGGTCGTCTTCTCCACTGAAAGGTTTGGAGAATATTACCGTGGCGGAGATCGTTTCGAGAAATGGAGATGGAAGTATTGGCTCCTCGTGGTTATCCTGCAGTGCGGATGATGCGGCCATTGATACCGTGCAAAATGTAGCGAGTTTGATTCGGTTTCGCCATTTCCAAAAAGCTCGAAAGCTTTTCTTGTTGAGAAGATTGAGGAAATTTTCTTTGCTGCAGATGGCTAGAAACAACGTTGGATCGTTGGTGGTGTTGAAGCCTGAAGGACAACAAATCGCCGGAATTGTAACGGAAGGAGACTATCTGAAGAAGATAATAGCAGATGGGAGATGTCCCATATACACAAAAGTTGGGGAAATAATGACTTGTGAGGACAAACTAGTAACCGTTACGTCCGACACGAACATCCTTAAAGCAATGCAGCTTATGACAGAGAATCGCATAAGACATGTTCCTGTGATAGATGGCAAACTAGTTGGCATGATTTCTGTAGTAGATGTTGTCAAAGCAGTGGTAAAGCAGCAAAATGGGGAACTCGAGCGACTAAACGAGTATATAAAAGGAGAATCGTACTAA

Protein sequence

MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVSRNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQMARNNVGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY

Homology

[Close]

BLAST of Cp4.1LG11g02090 vs. ExPASy Swiss-Prot
Match: Q9LEV3 (CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CBSX3 PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.1e-34
Identity = 96/236 (40.68%), Postives = 139/236 (58.90%), Query Frame = 0


Query: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLK----GLENITVA 60
           MQ ++R+  S    +K +  QH  R     ++  +  S S  S+ P +    G E+ T++
Sbjct: 1   MQGVIRSFVSGGNVVKGSVLQH-LRVINPAIQPSVFCSRSE-STQPARMEESGFESTTIS 60

Query: 61  EIVSRNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQM 120
           +++   G  + G SWL C+ DD   D V++                             M
Sbjct: 61  DVMKSKGKSADG-SWLWCTTDDTVYDAVKS-----------------------------M 120

Query: 121 ARNNVGSLVVLKP-EGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSD 180
            ++NVG+LVV+KP E Q +AGI+TE DYL+KII  GR    TKVG+IMT E+KL+TVT +
Sbjct: 121 TQHNVGALVVVKPGEQQALAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPE 180

Query: 181 TNILKAMQLMTENRIRHVPVIDGK-LVGMISVVDVVKAVVKQQNGELERLNEYIKG 231
           T +L+AMQLMT+NRIRH+PVI  K ++GM+S+ DVV+AVV +   EL+RLN YI+G
Sbjct: 181 TKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSIGDVVRAVVHEHREELQRLNAYIQG 204

[Close]

BLAST of Cp4.1LG11g02090 vs. ExPASy Swiss-Prot
Match: P32987 (Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens OX=2283 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-08
Identity = 40/118 (33.90%), Postives = 68/118 (57.63%), Query Frame = 0


Query: 115 QMARNNVGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTS 174
           +M  +N+GSLVV+  +  ++ GI+TE D +K   A     I + V + MT + K   VT 
Sbjct: 28  EMKEHNLGSLVVIDSQ-NRVVGIITERDIVK---AASNRDIDSPVEKYMTKDVK--GVTE 87

Query: 175 DTNILKAMQLMTENRIRHVPVI--DGKLVGMISVVDVVKAVVKQQNGELERLNEYIKG 231
           DT +  A+ +M  N  RH+P+I  +GKL G++S+ D+ +A++     +  +  E +KG
Sbjct: 88  DTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFGKPAEEVKG 139

[Close]

BLAST of Cp4.1LG11g02090 vs. ExPASy Swiss-Prot
Match: P50100 (Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) OX=190192 GN=MK0525 PE=4 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 3.0e-08
Identity = 36/131 (27.48%), Postives = 76/131 (58.02%), Query Frame = 0


Query: 115 QMARNNVGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTS 174
           +M  + +GS+V++  + + I GI+TE D + K+++ G+ P      +IM+    ++TV  
Sbjct: 29  KMREHGIGSVVIVNEKDEPI-GIITERDLVIKVVSQGKNPDEVIARDIMS--QPVITVEE 88

Query: 175 DTNILKAMQLMTENRIRHVPVID--GKLVGMISVVDVVKA-------------VVKQQNG 231
           D  + +A++LM +  IR +P++D  GKL+G++++ D+++                +++  
Sbjct: 89  DMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVEPYLVATIEEEMKKFQEELE 148

[Close]

BLAST of Cp4.1LG11g02090 vs. ExPASy Swiss-Prot
Match: O58045 (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=guaB PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.3e-07
Identity = 41/118 (34.75%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 111 FSLLQMARNNVGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLV 170
           F+L  M ++ +  L V+  E +++ GI+T+ D   +   +G+      V E+MT E  ++
Sbjct: 114 FALFLMEKHGIDGLPVV--EDEKVVGIITKKDIAAR---EGKL-----VKELMTKE--VI 173

Query: 171 TVTSDTNILKAMQLMTENRIRHVPVID--GKLVGMISVVDVV-----KAVVKQQNGEL 222
           TV     + +A+++M ENRI  +PV+D  GKLVG+I++ D+V     K  V+ +NGEL
Sbjct: 174 TVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKKYKNAVRDENGEL 219

[Close]

BLAST of Cp4.1LG11g02090 vs. ExPASy Swiss-Prot
Match: Q9SJQ5 (CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana OX=3702 GN=CBSCBSPB2 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06
Identity = 33/99 (33.33%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 115 QMARNNVGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTS 174
           +MA   V + V+L      ++GIVT+ D   ++IA+G  P +T V ++MT     + VTS
Sbjct: 85  RMAARRVDA-VLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTRNP--IFVTS 144

Query: 175 DTNILKAMQLMTENRIRHVPVIDGKLVGMISVVDVVKAV 214
           D+  ++A+Q M + + RH+PV++   V  I+++D+ K +
Sbjct: 145 DSLAIEALQKMVQGKFRHLPVVENGEV--IALLDITKCL 178

[Close]

BLAST of Cp4.1LG11g02090 vs. NCBI nr
Match: XP_023546014.1 (CBS domain-containing protein CBSX3, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 441 bits (1134), Expect = 1.12e-155
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60
           MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS
Sbjct: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60

Query: 61  RNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQMARNN 120
           RNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQMARNN
Sbjct: 61  RNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQMARNN 120

Query: 121 VGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180
           VGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK
Sbjct: 121 VGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180

Query: 181 AMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY 233
           AMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY
Sbjct: 181 AMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY 233

[Close]

BLAST of Cp4.1LG11g02090 vs. NCBI nr
Match: KAG7029394.1 (CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 430 bits (1105), Expect = 2.95e-151
Identity = 226/233 (97.00%), Postives = 228/233 (97.85%), Query Frame = 0


Query: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60
           MQ IVRA+RSWQETLKIANS HSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS
Sbjct: 1   MQGIVRAIRSWQETLKIANSHHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60

Query: 61  RNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQMARNN 120
           RNGDGSIGSSW SCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLR FSLLQMARNN
Sbjct: 61  RNGDGSIGSSWFSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRNFSLLQMARNN 120

Query: 121 VGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180
           VGSLVVLKPEGQ IAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK
Sbjct: 121 VGSLVVLKPEGQHIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180

Query: 181 AMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY 233
           AMQLMTENRIRHVPVIDGKLVG+ISVVDVVKAVVKQQNGELERLNEYIKGESY
Sbjct: 181 AMQLMTENRIRHVPVIDGKLVGIISVVDVVKAVVKQQNGELERLNEYIKGESY 233

[Close]

BLAST of Cp4.1LG11g02090 vs. NCBI nr
Match: XP_023546015.1 (CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375 bits (963), Expect = 4.57e-130
Identity = 204/233 (87.55%), Postives = 204/233 (87.55%), Query Frame = 0


Query: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60
           MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS
Sbjct: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60

Query: 61  RNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQMARNN 120
           RNGDGSIGSSWLSCSADDAAIDTVQN                             MARNN
Sbjct: 61  RNGDGSIGSSWLSCSADDAAIDTVQN-----------------------------MARNN 120

Query: 121 VGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180
           VGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK
Sbjct: 121 VGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180

Query: 181 AMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY 233
           AMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY
Sbjct: 181 AMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY 204

[Close]

BLAST of Cp4.1LG11g02090 vs. NCBI nr
Match: XP_022961868.1 (CBS domain-containing protein CBSX3, mitochondrial-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 368 bits (944), Expect = 3.72e-127
Identity = 199/233 (85.41%), Postives = 201/233 (86.27%), Query Frame = 0


Query: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60
           MQ IVRA+RSWQETLKIANS HSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS
Sbjct: 1   MQGIVRAIRSWQETLKIANSHHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60

Query: 61  RNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQMARNN 120
           RNGDGSIGSSW SCSADDAAIDTVQNV                            MARNN
Sbjct: 61  RNGDGSIGSSWFSCSADDAAIDTVQNV----------------------------MARNN 120

Query: 121 VGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180
           VGSLVVLKPEGQ IAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK
Sbjct: 121 VGSLVVLKPEGQHIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180

Query: 181 AMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY 233
           AMQLMTENRIRHVPVIDGKLVG+ISVVDVVKAVVKQQNGELERLNEYIKGESY
Sbjct: 181 AMQLMTENRIRHVPVIDGKLVGIISVVDVVKAVVKQQNGELERLNEYIKGESY 205

[Close]

BLAST of Cp4.1LG11g02090 vs. NCBI nr
Match: XP_022961869.1 (CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 366 bits (939), Expect = 2.07e-126
Identity = 198/233 (84.98%), Postives = 200/233 (85.84%), Query Frame = 0


Query: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60
           MQ IVRA+RSWQETLKIANS HSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS
Sbjct: 1   MQGIVRAIRSWQETLKIANSHHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60

Query: 61  RNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQMARNN 120
           RNGDGSIGSSW SCSADDAAIDTVQN                             MARNN
Sbjct: 61  RNGDGSIGSSWFSCSADDAAIDTVQN-----------------------------MARNN 120

Query: 121 VGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180
           VGSLVVLKPEGQ IAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK
Sbjct: 121 VGSLVVLKPEGQHIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180

Query: 181 AMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY 233
           AMQLMTENRIRHVPVIDGKLVG+ISVVDVVKAVVKQQNGELERLNEYIKGESY
Sbjct: 181 AMQLMTENRIRHVPVIDGKLVGIISVVDVVKAVVKQQNGELERLNEYIKGESY 204

[Close]

BLAST of Cp4.1LG11g02090 vs. ExPASy TrEMBL
Match: A0A6J1HD27 (CBS domain-containing protein CBSX3, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462506 PE=4 SV=1)

HSP 1 Score: 368 bits (944), Expect = 1.80e-127
Identity = 199/233 (85.41%), Postives = 201/233 (86.27%), Query Frame = 0


Query: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60
           MQ IVRA+RSWQETLKIANS HSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS
Sbjct: 1   MQGIVRAIRSWQETLKIANSHHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60

Query: 61  RNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQMARNN 120
           RNGDGSIGSSW SCSADDAAIDTVQNV                            MARNN
Sbjct: 61  RNGDGSIGSSWFSCSADDAAIDTVQNV----------------------------MARNN 120

Query: 121 VGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180
           VGSLVVLKPEGQ IAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK
Sbjct: 121 VGSLVVLKPEGQHIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180

Query: 181 AMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY 233
           AMQLMTENRIRHVPVIDGKLVG+ISVVDVVKAVVKQQNGELERLNEYIKGESY
Sbjct: 181 AMQLMTENRIRHVPVIDGKLVGIISVVDVVKAVVKQQNGELERLNEYIKGESY 205

[Close]

BLAST of Cp4.1LG11g02090 vs. ExPASy TrEMBL
Match: A0A6J1HF98 (CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462506 PE=4 SV=1)

HSP 1 Score: 366 bits (939), Expect = 1.00e-126
Identity = 198/233 (84.98%), Postives = 200/233 (85.84%), Query Frame = 0


Query: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60
           MQ IVRA+RSWQETLKIANS HSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS
Sbjct: 1   MQGIVRAIRSWQETLKIANSHHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60

Query: 61  RNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQMARNN 120
           RNGDGSIGSSW SCSADDAAIDTVQN                             MARNN
Sbjct: 61  RNGDGSIGSSWFSCSADDAAIDTVQN-----------------------------MARNN 120

Query: 121 VGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180
           VGSLVVLKPEGQ IAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK
Sbjct: 121 VGSLVVLKPEGQHIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180

Query: 181 AMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY 233
           AMQLMTENRIRHVPVIDGKLVG+ISVVDVVKAVVKQQNGELERLNEYIKGESY
Sbjct: 181 AMQLMTENRIRHVPVIDGKLVGIISVVDVVKAVVKQQNGELERLNEYIKGESY 204

[Close]

BLAST of Cp4.1LG11g02090 vs. ExPASy TrEMBL
Match: A0A6J1K7H6 (CBS domain-containing protein CBSX3, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491856 PE=4 SV=1)

HSP 1 Score: 362 bits (928), Expect = 2.17e-124
Identity = 194/233 (83.26%), Postives = 200/233 (85.84%), Query Frame = 0


Query: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60
           MQAIV+ALRSWQETLKIANSQHSCRRETNQVEK LEGSESRGSSSPLKG+ENITVAEIVS
Sbjct: 43  MQAIVKALRSWQETLKIANSQHSCRRETNQVEKFLEGSESRGSSSPLKGMENITVAEIVS 102

Query: 61  RNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQMARNN 120
           R GDGSIGSSW SCSADDAAIDTVQNV                            MARNN
Sbjct: 103 RKGDGSIGSSWFSCSADDAAIDTVQNV----------------------------MARNN 162

Query: 121 VGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180
           VGSLVVLKPEGQ IAGIVTEGDYLKKIIADGRCPI+TKVGEIMTCEDKLVTVTSDTNILK
Sbjct: 163 VGSLVVLKPEGQHIAGIVTEGDYLKKIIADGRCPIFTKVGEIMTCEDKLVTVTSDTNILK 222

Query: 181 AMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY 233
           AMQLMTENR RHVPVIDGKLVGMIS+VDVVKAVVKQQNGELE++NEYIKGESY
Sbjct: 223 AMQLMTENRTRHVPVIDGKLVGMISIVDVVKAVVKQQNGELEQINEYIKGESY 247

[Close]

BLAST of Cp4.1LG11g02090 vs. ExPASy TrEMBL
Match: A0A6J1K5H5 (CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491856 PE=4 SV=1)

HSP 1 Score: 360 bits (923), Expect = 1.21e-123
Identity = 193/233 (82.83%), Postives = 199/233 (85.41%), Query Frame = 0


Query: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60
           MQAIV+ALRSWQETLKIANSQHSCRRETNQVEK LEGSESRGSSSPLKG+ENITVAEIVS
Sbjct: 43  MQAIVKALRSWQETLKIANSQHSCRRETNQVEKFLEGSESRGSSSPLKGMENITVAEIVS 102

Query: 61  RNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQMARNN 120
           R GDGSIGSSW SCSADDAAIDTVQN                             MARNN
Sbjct: 103 RKGDGSIGSSWFSCSADDAAIDTVQN-----------------------------MARNN 162

Query: 121 VGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180
           VGSLVVLKPEGQ IAGIVTEGDYLKKIIADGRCPI+TKVGEIMTCEDKLVTVTSDTNILK
Sbjct: 163 VGSLVVLKPEGQHIAGIVTEGDYLKKIIADGRCPIFTKVGEIMTCEDKLVTVTSDTNILK 222

Query: 181 AMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY 233
           AMQLMTENR RHVPVIDGKLVGMIS+VDVVKAVVKQQNGELE++NEYIKGESY
Sbjct: 223 AMQLMTENRTRHVPVIDGKLVGMISIVDVVKAVVKQQNGELEQINEYIKGESY 246

[Close]

BLAST of Cp4.1LG11g02090 vs. ExPASy TrEMBL
Match: A0A6J1KTQ7 (CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111496322 PE=4 SV=1)

HSP 1 Score: 317 bits (811), Expect = 3.13e-107
Identity = 173/233 (74.25%), Postives = 186/233 (79.83%), Query Frame = 0


Query: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLKGLENITVAEIVS 60
           MQ +VRA+RSWQETLKIA SQHSCRRETNQVEK+ +GS+   SSS LKGLENI+VAEI+S
Sbjct: 1   MQGMVRAVRSWQETLKIAISQHSCRRETNQVEKLFKGSDIGASSSMLKGLENISVAEIIS 60

Query: 61  RNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQMARNN 120
             GDGSIGS WLSC ADD AID VQN                             MARNN
Sbjct: 61  SKGDGSIGSPWLSCRADDTAIDAVQN-----------------------------MARNN 120

Query: 121 VGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILK 180
           +GSLVVLKPEGQ IAGIVTE DYLKKIIADGR PIYTKVGEIMT EDKLV+VTSDTNILK
Sbjct: 121 IGSLVVLKPEGQHIAGIVTERDYLKKIIADGRSPIYTKVGEIMTSEDKLVSVTSDTNILK 180

Query: 181 AMQLMTENRIRHVPVIDGKLVGMISVVDVVKAVVKQQNGELERLNEYIKGESY 233
           AMQLMTENRIRHVPVIDGKLVGMIS+VDVV+AVV+QQNGEL+RLNEYIKGE Y
Sbjct: 181 AMQLMTENRIRHVPVIDGKLVGMISIVDVVRAVVEQQNGELKRLNEYIKGEYY 204

[Close]

BLAST of Cp4.1LG11g02090 vs. TAIR 10
Match: AT1G47271.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.8e-46
Identity = 111/212 (52.36%), Postives = 137/212 (64.62%), Query Frame = 0


Query: 29  NQVEKILEGSESRG------SSSPLKGLENITVAEIVSRNGDGSIGSSWLSCSADDAAID 88
           N+V KI +   S G         P KGLEN+TVA+++S   D  I  +W+SC  +D   D
Sbjct: 13  NEVPKIHQRKVSAGFGCLTSPPPPEKGLENLTVADVLSTK-DTDI-DTWISCRTNDTVSD 72

Query: 89  TVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQMARNNVGSLVVLKPEGQQ-IAGIVTEG 148
            V+N                             MA++N+GSLVVL+P  QQ IAGIVTE 
Sbjct: 73  AVKN-----------------------------MAKHNIGSLVVLEPGDQQYIAGIVTER 132

Query: 149 DYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILKAMQLMTENRIRHVPVIDGKLV 208
           DY+KKII  GR    TKVGE+MT E KLVTV+S TNI+KAMQLM+EN IRHVPVIDGK+V
Sbjct: 133 DYMKKIIGAGRSSKLTKVGEVMTDESKLVTVSSGTNIIKAMQLMSENHIRHVPVIDGKIV 192

Query: 209 GMISVVDVVKAVVKQQNGELERLNEYIKGESY 234
           G+IS+VDVVKA+V  QNGEL+RLNE+IKG+ Y
Sbjct: 193 GLISMVDVVKAIVDHQNGELKRLNEFIKGDYY 193

[Close]

BLAST of Cp4.1LG11g02090 vs. TAIR 10
Match: AT5G10860.1 (Cystathionine beta-synthase (CBS) family protein )

HSP 1 Score: 146.4 bits (368), Expect = 2.9e-35
Identity = 96/236 (40.68%), Postives = 139/236 (58.90%), Query Frame = 0


Query: 1   MQAIVRALRSWQETLKIANSQHSCRRETNQVEKILEGSESRGSSSPLK----GLENITVA 60
           MQ ++R+  S    +K +  QH  R     ++  +  S S  S+ P +    G E+ T++
Sbjct: 1   MQGVIRSFVSGGNVVKGSVLQH-LRVINPAIQPSVFCSRSE-STQPARMEESGFESTTIS 60

Query: 61  EIVSRNGDGSIGSSWLSCSADDAAIDTVQNVASLIRFRHFQKARKLFLLRRLRKFSLLQM 120
           +++   G  + G SWL C+ DD   D V++                             M
Sbjct: 61  DVMKSKGKSADG-SWLWCTTDDTVYDAVKS-----------------------------M 120

Query: 121 ARNNVGSLVVLKP-EGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSD 180
            ++NVG+LVV+KP E Q +AGI+TE DYL+KII  GR    TKVG+IMT E+KL+TVT +
Sbjct: 121 TQHNVGALVVVKPGEQQALAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPE 180

Query: 181 TNILKAMQLMTENRIRHVPVIDGK-LVGMISVVDVVKAVVKQQNGELERLNEYIKG 231
           T +L+AMQLMT+NRIRH+PVI  K ++GM+S+ DVV+AVV +   EL+RLN YI+G
Sbjct: 181 TKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSIGDVVRAVVHEHREELQRLNAYIQG 204

[Close]

BLAST of Cp4.1LG11g02090 vs. TAIR 10
Match: AT2G36500.1 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein )

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-07
Identity = 33/99 (33.33%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 115 QMARNNVGSLVVLKPEGQQIAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTS 174
           +MA   V + V+L      ++GIVT+ D   ++IA+G  P +T V ++MT     + VTS
Sbjct: 85  RMAARRVDA-VLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVMTRNP--IFVTS 144

Query: 175 DTNILKAMQLMTENRIRHVPVIDGKLVGMISVVDVVKAV 214
           D+  ++A+Q M + + RH+PV++   V  I+++D+ K +
Sbjct: 145 DSLAIEALQKMVQGKFRHLPVVENGEV--IALLDITKCL 178

[Close]

BLAST of Cp4.1LG11g02090 vs. TAIR 10
Match: AT3G52950.1 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein )

HSP 1 Score: 52.0 bits (123), Expect = 7.6e-07
Identity = 29/80 (36.25%), Postives = 51/80 (63.75%), Query Frame = 0


Query: 134 IAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILKAMQLMTENRIRHV 193
           ++GIVT+ D   ++IA+G  P  T V ++MT     + VTSD+  L+A+Q M + + RH+
Sbjct: 105 LSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNP--IFVTSDSLALEALQKMVQGKFRHL 164

Query: 194 PVIDGKLVGMISVVDVVKAV 214
           PV++   V  I+++D+ K +
Sbjct: 165 PVVENGEV--IALLDITKCL 180

[Close]

BLAST of Cp4.1LG11g02090 vs. TAIR 10
Match: AT3G52950.2 (CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein )

HSP 1 Score: 52.0 bits (123), Expect = 7.6e-07
Identity = 29/80 (36.25%), Postives = 51/80 (63.75%), Query Frame = 0


Query: 134 IAGIVTEGDYLKKIIADGRCPIYTKVGEIMTCEDKLVTVTSDTNILKAMQLMTENRIRHV 193
           ++GIVT+ D   ++IA+G  P  T V ++MT     + VTSD+  L+A+Q M + + RH+
Sbjct: 105 LSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNP--IFVTSDSLALEALQKMVQGKFRHL 164

Query: 194 PVIDGKLVGMISVVDVVKAV 214
           PV++   V  I+++D+ K +
Sbjct: 165 PVVENGEV--IALLDITKCL 180

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g02090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LEV3	4.1e-34	40.68	CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]
P32987	1.8e-08	33.90	Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens OX=228...	[more]
P50100	3.0e-08	27.48	Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 ...	[more]
O58045	4.3e-07	34.75	Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC 700...	[more]
Q9SJQ5	1.6e-06	33.33	CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana OX=3702 GN=CBSCB...	[more]

BLAST of Cp4.1LG11g02090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546014.1	1.12e-155	100.00	CBS domain-containing protein CBSX3, mitochondrial-like isoform X1 [Cucurbita pe...	[more]
KAG7029394.1	2.95e-151	97.00	CBS domain-containing protein CBSX3, mitochondrial, partial [Cucurbita argyrospe...	[more]
XP_023546015.1	4.57e-130	87.55	CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 [Cucurbita pe...	[more]
XP_022961868.1	3.72e-127	85.41	CBS domain-containing protein CBSX3, mitochondrial-like isoform X1 [Cucurbita mo...	[more]
XP_022961869.1	2.07e-126	84.98	CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 [Cucurbita mo...	[more]

BLAST of Cp4.1LG11g02090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HD27	1.80e-127	85.41	CBS domain-containing protein CBSX3, mitochondrial-like isoform X1 OS=Cucurbita ...	[more]
A0A6J1HF98	1.00e-126	84.98	CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 OS=Cucurbita ...	[more]
A0A6J1K7H6	2.17e-124	83.26	CBS domain-containing protein CBSX3, mitochondrial-like isoform X1 OS=Cucurbita ...	[more]
A0A6J1K5H5	1.21e-123	82.83	CBS domain-containing protein CBSX3, mitochondrial-like isoform X2 OS=Cucurbita ...	[more]
A0A6J1KTQ7	3.13e-107	74.25	CBS domain-containing protein CBSX3, mitochondrial-like OS=Cucurbita maxima OX=3...	[more]

BLAST of Cp4.1LG11g02090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47271.1	2.8e-46	52.36	Cystathionine beta-synthase (CBS) family protein	[more]
AT5G10860.1	2.9e-35	40.68	Cystathionine beta-synthase (CBS) family protein	[more]
AT2G36500.1	1.2e-07	33.33	CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein	[more]
AT3G52950.1	7.6e-07	36.25	CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein	[more]
AT3G52950.2	7.6e-07	36.25	CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000644	CBS domain	SMART	SM00116	cbs_1	coord: 101..148 e-value: 82.0 score: 1.5 coord: 168..214 e-value: 6.8E-11 score: 52.2
IPR000644	CBS domain	PFAM	PF00571	CBS	coord: 159..214 e-value: 1.3E-11 score: 44.8
IPR000644	CBS domain	PROSITE	PS51371	CBS	coord: 163..221 score: 13.63623
None	No IPR available	GENE3D	3.10.580.10		coord: 112..233 e-value: 1.1E-36 score: 127.8
None	No IPR available	PIRSR	PIRSR006404-1	PIRSR006404-1	coord: 114..214 e-value: 1.4E-8 score: 32.2
None	No IPR available	PANTHER	PTHR43080	CBS DOMAIN-CONTAINING PROTEIN CBSX3, MITOCHONDRIAL	coord: 1..89 coord: 114..231
None	No IPR available	PANTHER	PTHR43080:SF12	CYSTATHIONINE BETA-SYNTHASE (CBS) FAMILY PROTEIN	coord: 1..89 coord: 114..231
None	No IPR available	SUPERFAMILY	54631	CBS-domain pair	coord: 115..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g02090.1	Cp4.1LG11g02090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane