CSPI07G10000 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI07G10000
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr7: 8056618 .. 8056824 (+)
RNA-Seq ExpressionCSPI07G10000
SyntenyCSPI07G10000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTTTAAAGCTGAAATGAAGCTGGAAAAAAGGCAGAAAAACAGTGGCATCGAGAAGAACGAATGGGATAAGGCATTCACTCCATACCAACGAAAAAATTATGACAATGCCAAGCAAGTTCAAAGCTCAAATACATACATCAAAGGTGAAAGAAGACCAACCTTCCAAAACAAACCAAAGCACAAGAACTCAAGAACTCTCTAA

mRNA sequence

ATGACTTTTAAAGCTGAAATGAAGCTGGAAAAAAGGCAGAAAAACAGTGGCATCGAGAAGAACGAATGGGATAAGGCATTCACTCCATACCAACGAAAAAATTATGACAATGCCAAGCAAGTTCAAAGCTCAAATACATACATCAAAGGTGAAAGAAGACCAACCTTCCAAAACAAACCAAAGCACAAGAACTCAAGAACTCTCTAA

Coding sequence (CDS)

ATGACTTTTAAAGCTGAAATGAAGCTGGAAAAAAGGCAGAAAAACAGTGGCATCGAGAAGAACGAATGGGATAAGGCATTCACTCCATACCAACGAAAAAATTATGACAATGCCAAGCAAGTTCAAAGCTCAAATACATACATCAAAGGTGAAAGAAGACCAACCTTCCAAAACAAACCAAAGCACAAGAACTCAAGAACTCTCTAA

Protein sequence

MTFKAEMKLEKRQKNSGIEKNEWDKAFTPYQRKNYDNAKQVQSSNTYIKGERRPTFQNKPKHKNSRTL*
Homology
[Close]
BLAST of CSPI07G10000 vs. ExPASy TrEMBL
Match: A0A5D3CPR5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00370 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-10
Identity = 37/61 (60.66%), Postives = 43/61 (70.49%), Query Frame = 0 

Query: 1   MTFKAEMKLEKRQKNSGIEKNEWDKAFTPYQRKNYDNAKQVQSSNTYIKGERRPTFQNKP 60
           M FKAEMKLEKRQKN+G +KN+WDK FTPYQRKNYDN +QVQ   T    E+       P
Sbjct: 171 MAFKAEMKLEKRQKNNGTKKNKWDKTFTPYQRKNYDNVRQVQGFGTSKAKEQSSKANQSP 230

Query: 61  K 62
           +
Sbjct: 231 R 231

[Close]
BLAST of CSPI07G10000 vs. ExPASy TrEMBL
Match: A0A5D3CYP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00940 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.6e-07
Identity = 33/46 (71.74%), Postives = 37/46 (80.43%), Query Frame = 0 

Query: 1   MTFKAEMKLEKRQKNSGIEKNEWDKAFTPYQRKNYDNAKQVQSSNT 47
           M FKAEMKLEKR+  SG +KN+ DKAFT YQRKNYDN KQ Q S+T
Sbjct: 95  MAFKAEMKLEKRKIISGTKKNQSDKAFTSYQRKNYDNIKQGQGSST 140

[Close]
BLAST of CSPI07G10000 vs. NCBI nr
Match: TYK13853.1 (uncharacterized protein E5676_scaffold832G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 2.6e-10
Identity = 37/61 (60.66%), Postives = 43/61 (70.49%), Query Frame = 0 

Query: 1   MTFKAEMKLEKRQKNSGIEKNEWDKAFTPYQRKNYDNAKQVQSSNTYIKGERRPTFQNKP 60
           M FKAEMKLEKRQKN+G +KN+WDK FTPYQRKNYDN +QVQ   T    E+       P
Sbjct: 171 MAFKAEMKLEKRQKNNGTKKNKWDKTFTPYQRKNYDNVRQVQGFGTSKAKEQSSKANQSP 230

Query: 61  K 62
           +
Sbjct: 231 R 231

[Close]
BLAST of CSPI07G10000 vs. NCBI nr
Match: TYK16074.1 (hypothetical protein E5676_scaffold32G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06
Identity = 33/46 (71.74%), Postives = 37/46 (80.43%), Query Frame = 0 

Query: 1   MTFKAEMKLEKRQKNSGIEKNEWDKAFTPYQRKNYDNAKQVQSSNT 47
           M FKAEMKLEKR+  SG +KN+ DKAFT YQRKNYDN KQ Q S+T
Sbjct: 95  MAFKAEMKLEKRKIISGTKKNQSDKAFTSYQRKNYDNIKQGQGSST 140

The following BLAST results are available for this feature:
BLAST of CSPI07G10000 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI07G10000 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CPR51.3e-1060.66Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CYP46.6e-0771.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CSPI07G10000 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK13853.12.6e-1060.66uncharacterized protein E5676_scaffold832G00370 [Cucumis melo var. makuwa][more]
TYK16074.11.4e-0671.74hypothetical protein E5676_scaffold32G00940 [Cucumis melo var. makuwa][more]
BLAST of CSPI07G10000 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G10000.1CSPI07G10000.1mRNA