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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTGAGCAGCAGAGCTTCCGCCGCACAGAGGCAGTTAACGGTGAACGGAGCCGCCGTGGGGGCGCTTTAGACGGCCGGATTTGTCTGTTGCCGAACACGAGCGAGTTTCAGTGGGATGCATCCGTCAGAAGAATCCCATTCAACTAACCTCACGCTTTGCTCGTGACTTTTCTCGTTTTAGGCCGATCTATCTTTCGGGCCGACCCAAAACAATAGGTTTGGGCTCCATATTGGGCCTGTGTTTTGGATTCATGAAGCCCGTTTCTCATCTTAA mRNA sequence ATGGCTGAGCAGCAGAGCTTCCGCCGCACAGAGGCAGTTAACGGTGAACGGAGCCGCCGTGGGGGCGCTTTAGACGGCCGGATTTGTCTGTTGCCGAACACGAGCGAGTTTCAGTGGGATGCATCCGCCGATCTATCTTTCGGGCCGACCCAAAACAATAGGTTTGGGCTCCATATTGGGCCTGTGTTTTGGATTCATGAAGCCCGTTTCTCATCTTAA Coding sequence (CDS) ATGGCTGAGCAGCAGAGCTTCCGCCGCACAGAGGCAGTTAACGGTGAACGGAGCCGCCGTGGGGGCGCTTTAGACGGCCGGATTTGTCTGTTGCCGAACACGAGCGAGTTTCAGTGGGATGCATCCGCCGATCTATCTTTCGGGCCGACCCAAAACAATAGGTTTGGGCTCCATATTGGGCCTGTGTTTTGGATTCATGAAGCCCGTTTCTCATCTTAA Protein sequence MAEQQSFRRTEAVNGERSRRGGALDGRICLLPNTSEFQWDASADLSFGPTQNNRFGLHIGPVFWIHEARFSS*
Homology
BLAST of CSPI06G19910 vs. ExPASy TrEMBL
Match: A0A0A0KIS7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G373200 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.0e-34 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
Query: 1 MAEQQSFRRTEAVNGERSRRGGALDGRICLLPNTSEFQWDASADLSFGPTQNNRFGLHIG 60
MAEQQSFRRTEAVNGERSRRGGALDGRICLLPNTSEFQWDASADLSFGPTQNNRFGLHIG
Sbjct: 7 MAEQQSFRRTEAVNGERSRRGGALDGRICLLPNTSEFQWDASADLSFGPTQNNRFGLHIG 66
Query: 61 PVFWIHEARFSS 73
PVFWIHEARFSS
Sbjct: 67 PVFWIHEARFSS 78
BLAST of CSPI06G19910 vs. NCBI nr
Match: KGN47676.1 (hypothetical protein Csa_018273 [Cucumis sativus]) HSP 1 Score: 155.2 bits (391), Expect = 2.1e-34 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
Query: 1 MAEQQSFRRTEAVNGERSRRGGALDGRICLLPNTSEFQWDASADLSFGPTQNNRFGLHIG 60
MAEQQSFRRTEAVNGERSRRGGALDGRICLLPNTSEFQWDASADLSFGPTQNNRFGLHIG
Sbjct: 7 MAEQQSFRRTEAVNGERSRRGGALDGRICLLPNTSEFQWDASADLSFGPTQNNRFGLHIG 66
Query: 61 PVFWIHEARFSS 73
PVFWIHEARFSS
Sbjct: 67 PVFWIHEARFSS 78
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KIS7 | 1.0e-34 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G373200 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN47676.1 | 2.1e-34 | 100.00 | hypothetical protein Csa_018273 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..20 |
Relationships
The following mRNA feature(s) are a part of this gene:
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