Cucsat.G7729 (gene) Cucumber (B10) v3

Overview
NameCucsat.G7729
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptiontransmembrane protein 50A
Locationctg1546: 259999 .. 269138 (-)
RNA-Seq ExpressionCucsat.G7729
SyntenyCucsat.G7729
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACCAAACCAAACCAAACCACATTTTAATCCGAAATCGGAGAAAACTTGTAATTTAATTTTTAAAGAAAATGCCGCAATGATATATTTCCCCGAATATCAGAGCTTCGAGGGAAGGTATGGGAGTTATAACATTGAGCTGGAAAAGGGTGTGAGCCTGTGAGGTGTGCGATCATTCAGTTCACACTACCCTCTCCAGATCGACCCGCTTCCAACAACCTGCGTAAGGAGAAAGCAAAAACAAAGAGCCCCACAAATGGATTTGGCGGAGCTTTGGTCAATTTTCGGCCCAGGCGTTGCCGGAGCTGTGTTTGGCGCCGGATGGTGGTTCTGGGTTGACGCCGTTGTCTGCAGTTCTGTTGCCGTCTCCTTTGTCCACTACCTCCCAGGTTCTTTACTCATCTGCGAGTCCACACCACGTTTAATTTGCCCTTAGGGTTTTTGACGATGTTCTGGTATTGCGGTTGTAGGTATTTTTGCTTCTTTTGCGGCTTTGATGTTCAATTGCGTTCGAAAAGAAGACATCGATTATTCTCCATACGAGGAGGGGGAATGGAGGTGACAAGTTTATGCTTTATCTACGTAGCTCTCTTCCTTCTTTGCTTTCTGGATGTTCTATTGTTTAAATCTGTCAGTAAGCATGTTGCGACCCGCTTTGCCTAGTAATTCGTCTAGATTGAAAGGAATGTCACAGTGTTCTTCTTCGACAAGGTTATGTGGAATGTGATTTAGTACCTTGCTAGGATTATTCTCACTGAATATGTTAGGATCTTATGAACTCGTAACTCACATCTGGTTCTTAATTCTCAATTTACAATTTACAATATGCAATGCACTTCGAGTCAAACTTTGCGTGTTTGCAATGGAAGTTGGGTTCTAACTCTGGGGCTTGGTTGGAGCAGCCATAAGGAACTCACAATCAGTGCGGCCAAGTGATTGAATTCTTTGTTACTCGTCCATTATAACATTAGTAAGGTGAAAAATCAAACTTTGTGTCAATGGCCGTTTTTGATGTAAGAGCAATTTGGAGATCAATTTCTTCACTGAGATTTGTACACATTTTTTTGTCATGTGACCCTCAGTTATAATGTACTGCTTATCAATTAGACATCAAATAAATTGATTGTTTTATACCCTTTTTCAACCACCGCTCCAATTAAGTGAGTAGCGGACAAGGGTGAGGTTGTTTGGGTGTGTTAGCACGTGTCTAGTGAGGGTAGAGTTAAAGAAGACAGAATATGCACAGAAACTATTAGAGTTGAAAACGCAGAACTATTCTTGATAGAATGGTCCAAATGATGGCAAACATTAGCAGAGGTCTGACAACCATGGAAATGGTGTGAAAACAAAGAACACTTCTTGATAGAATTGTCGAAACGATGGAAAACATTAGCGGAGGTCTGACAACCATGGAAATAGTGAGTTAGAGATAAACGTGCTAAGGTCTACGAGCCACTATTCATCTTGCTTTTGTATGGAAATACAATTTTCTTTATTTTGGAAAATCACTTTTTTAGTATGTGCACTACACTGAAACATCATTCATTATAGGTTTGGTGTCTCAGGATTAAGATTCTCTCAATGAGACAAGAGACCAAGAGGTAGTAACAGTAGGGAATGGGGAATACTTCAAAAGGAGATCCCTCTTTTGGACTATAATCATGAAAATGCTAGAATTATAAATTTTTTTTTTGTGGTTTGATCACTGCCAAGATGTAGTGGTAGTAGTATGCTATATACTATATTACCAAAGTTATCTTTCAAAGCTGACTTATCCTGAAAGGAAAATCCTTGACTTGTCTCTTTCCAATAAGGGAAAGAAGAGGTTAACTGCACAGAATCTTTTCCTTGCCTATAAAAGCTGCCTTCAAGAATTATTGTGAATCATAGGTCCTCCAATCTAGGGAGACACTGATAACCCAAATTCTAGCAAAAGAAAAGACCTATAAAAAAAAGCAAAGAAACGAGGAAGGTATGATATTCCTCATTCTTCTTCCAAAGACAGTAAACTGAGGAGGACAATAATAGGTCCTCCAATCTAGGGAGACAAAATGATAACCCAAATTCTAGCAAAAGAAAAGACCTGTCGACAAAAGCAAAGAAACTAGGAAGTTATGAGATTCCTCATTCTTCTTCCAAAGACAGTAAACTGAGGAGGACAAAGCCCAGAGTGGGAACTTCTTTAATGTGTATGCAGTACTGAGATTGAAACTTCTATAGAGGAGAGACAACATTCTCTTCCATAGGGATCTTGAAATTCCTAATATAATTTGCAAAAGGGACTTTGAAACTTTCAGGCTGTTTGGTAAGATAAGATGCATTGAAGACTGTTTCGTCACATGTTGAGTAGTTGTCGTACTTGTTTGAGAATAAAATTAGTAATGACCTGCTAGCTGAAATCTATCTTCTAGGAACTTCATTATCAAAATAACACCCTCTTAAAAATGGAGTTCTTAAAGTGGTAATTGTAAAATTCAAACAAACTTGTCCATATGTCTATTGATCAATGGATATGCTGCCAAACTTGTCATGAATGGTGACATTAATTATGCCATCATTGATTGACCAATTAAGAAATAACAAAATAGAGCTTGGTAATGACATTCAAATTGCAGCCTGGTCCATATGGTTTACTAGTCGTGAACAATTACTTTCATTATCCCAGTAAGATACAAAAAGAATAGGAGATGAGTTATCCCACAGACCAACAACTTACAAAGAAAGGAGCCCAATTAGTTTAAATTTGGGATATACTTAGTCTAGTTACAAAAGAATTTAGAAGTGAGGATCAAGTGGAAGCAAAAAGAGAAACCAAATTCGAAAAAGGTCACTGTTAATTTTTTGATCATGAAAGATTCTAGAGTTTCTTTCATACCACAATCCCCAAGGGAGAGCGAATATCCCCATTGGATGGAAGGGTATTTGTTTCAGCATTTAGCTGAGGATTTTCAACTAACTGTAGAAGGCATTTGAGCCTTTCTTGGGCCAACATTCCTACATTTTGAACAAGCTAAACAATCTCCTCCAACAGTCAACAAGACAACAACGAAGAGACCAAAAAGAAGGCACATCAAAGATTCTTCACTCTTTTTAAAAAAGAATACACTAATTAGGAGAGAGTGCGTAATTTCGAAGGACTGTTTGGATTTTACAACTAGTGTTTAGCCTTTAAAAAGAGAAATTCAAAAGAAAGCTTTGACTTTCCTAGGACAAACCACATATGATAAGGTTTTTGCCTTTTCAGAGCTTATGACTTGGCCAATCTTATAGTGGTATTTAACTGAAAAGAAGCCATCGTTTTCCAACAACCATAGATGAGCTTGATTTTGTATAGTTGGGATGCCTTCTTCTTGTGGGATTCCCCCTTTTATGGACTTGGTTTTTGTATGTTCGTGTATTCTTTCATTTTTTCTCAATGAAAGTCATTTTCATTAAACAAAAACAAACAAACACATTGTCCTTGTTTTTCATCATTCTAAAAATCTAGAACGTGTTCAAAAAGCAACCCCATCATCAAATTTAGCATCGATGAAACTTCTTCTGAACTTTAAGTCCCACACATGAAGAGAATCAAACCAACACTAATAGACGAAAGAACACTTGGCAATCACTAGTCTAGCTTGAAACGACTAGGAAACTTCAATCAAAGGGATGATTCAACCGACCAATTGTCATTCAAGAATTGGGTTTTATCTCCACGACTCACTCTAAGTCTATACCATTGCCATTCCTCTGAATTGAGAATGTTTTTCATGATCTGGGGCCAAGTGCCTTTTGTTAGAACTAGTGGGCTTGGCCCTTAAAGTGTTTATGGGAAGATTTACCCTATTTCCTAATTCTTTTCCTTTTTTATTCCTTGGTGTATTCTATTTATTCTTCCTCTTTGTATCTATTGTATTCGTTCATCAAAAAAGAATAAAATTAACAATATCGTGGTTTTTCTCTCGGTTCTTGGGTTTCCACGTAAGCCTCGTGTTTTTGTTTATTGCTTTCAATATGGTATCAGAGACAAGCAATAACGGAACTCTAGAAACCAACCTAGGAGAAACCCAGATTGAACCTGAAGTCGTTGCCACCGCCACCATGGAAAAACTGCTCCAAAACCTTCAGAAGCCGTCGATCTATCCAATGGGACAGCCCTTTTCGCTGTCCACGCAACTCTCCAACCAGAAACAGCTTTTTGCATCACCCCTGTCAGGCGTGTAGGCCCACGCACCATCGCCTTTTCATCTAACCGCCCAACCCAACCTCCTCTACTCGTCGTCGTTTTTCCAACTAGCCTACCCTTTCGGTCATCTGCTGCCCCATGCGTCGCCAATTTTCACGAGCATACTTGTTCAAGGCGTTGTTTGTTTATGGCTGCATGCCCAAACATCCTCAAACCACCTTATCTTTATGTCTTGTACTTAGTTTAGTCTATTGCTTTCCTTTTTATGTCACTGACCTTGGGTATGGCATTTCACACTTTTCACATGCAAGTCTATCAAATCTAAAAAAGTTTAAAATGTACTATAGGGAGACATACTAGTTGAATCCTCGACCAAGCCTTTTTTTACACTTTGCAATCTAAGCTTTATTTGCAATTGACACTCTTCAATGCTTTCTTTAATGATGTTTTCAATGCTTTTCTTTCTCTCTCATGTTTTATAAAACCAATTTCTCTCAAAACGTGAAGAGAGGCTACATCATACCGTGAGTTTGCCCACGACTTTCGGTTTTAATATGGCTAACTTGTTCATCGAGTTAGATCAAGTGGTGCACAATCGCCCGTCTCGTGTTTTGCAAAGTTGCGATTTGGTATCAGTGCTTTGTTAGCTTGATGTAACTAAATAAGGCTATCTAAATAGGCCACCTAGTTAACTAACCAAAACTGTTAAAGTTGTTACAACTGAAACAGTTATTCTGTTGCTAAGTTCTTATATAAACAAACATCTTCACCACATTGGGAAGATAAGAGAGAAATTTTCAAAAAAATATACTTTGGTCTTACACCATAGCTCCTTGGCTAAGTGAGATGCAATTATGCCAGCAATGAAACAACTGTTGAAGTCGCAGTCTAAGCGATTTACCGAGATTGAAGAGCAATTCTTGTATTTGAGAGAATTGCTAGAAGAAAATAAGATTTCTTCAGACTTGGTTGGATGGGTTGGACGAAAAAGTTGGAGAAGTAGATGCATTGAATGCTTGGGTAGACGGACTACCCATAAACGAATTGATGTTGAGGGTTGATTCGATAGAACATAAAATTGCCTAAGCGGATAGTTTTGAACGTGGGAGTAGCTCTTCGAGTTTTCTCACGCACATGGAAGAGCATGTCGAAGAGCTCGACTCTTCTCAGAAGACCACGCTAAAAAGTCCAGTGATCTGTCAGACAACTTTCGAGCCACAATAGAGACAATTAAGGTCAAGATGGCCGAGATGAAAGTGCAAGTGAATTTAATGATGCAAGCAGTGGGTAACCAGACCCTGAATCAAACATGTAATGTTTCAAGCAAGTTCAAGATTCTAGAACCTAAAGCCTTCAATGGAAACTGCCATGCTAAAGAGCTTGAAAATTTCATATTTGATATGGAATAGTACTTTAAGGCCAGTGGAACCAACTTTGAAGAAACTAAGGTGACACTAGCCTCCATGCATTTGTCTAATGATGCAAAGCTCTGTAGAGGTCGAAAGTGAGCGACATCGAAAATGGTCAATGTACCATTGATACGCAGGAAGATCTTAAGAAAGAACTAAGGGCTCAATTCTTCCCTAAAAATATTGAGTTTATTGCAAGAAGAAAACTATAGGAACTTAGACTCACAGGAACCATAAGAGACCGTTAAACAATTCTCTACCGTTATGTTGGACATTTGAGACATGTCGGAAAATGATAAAATATTCTGCTTTGTAGAAGGGCTCAAGCCGTGGGCCAGGACTTAATTATACAAACAAGAGGTTGAGGTTCTTGCCTCTGCTCTTGCTTTTGACCTCATATTTATCAGTGATAAGGAAGACCCAGGTAAGATGGGTGTGATCATCAATAAAGGTCACAAACCATCGTTCCCTAGAGGAGGTAATGACCTTCGAGGGACCCCAAATGTCTCTATAAGTAAGGGTGAACGGTTGAGTTGGCTTATATGGCTGTGAGGGAGAGGAAAACCGATGCTGTTTGGCCCAAATACACACATCACAAGATATAGATGGGACATCAACTTTAGAGAAGAGATGGGGAAATAAAGACTTCATATATTGAAAGTTTGGGTGGTCCAATCGGAGATGCCAGAATATACAATCTTATTCAGAAATAGTAGAATATGAAGATAGTAAACTAGTCCTAGAGTTACTACTAGCGAATGTATGATTGTCAAGGAGATAGAGTCCTCTGTTGTGTTGGGCAGTGCCAATTATCCTCTTTGAGCTCTAGTCCTGAAAAGAAACAAAATCTGGTAAGAAAGTAGCTTTGTAGTTCAGTTCACGAGTGATCTTGCTTATATATAGCTAATTATAGGAAATCTTAGGCACACATGCAATACATTATGGAGAGATAGCCTCTTAAAGGGAAAAAATTGCCCCTTCTTAGCATTTGGAGCAAAGAAACCATCGACTATTCTGATCTTTTCATTACCAACACATGGAATATAAGAAACGAAATGCTCAGTGGAACTTGTCAAGTGATTTGTAGCACCCAAGTTTAGGATCCAAGGACTCTTCCCATCGACACCGATAAAACTAAGGGACCGAGGCATACTTGATTGAGCAATGACTGCTAGAGTGGATGGTGGACTGAAACTGTTCTGGTTTACAGTAGGGCCAAATGGTTGAGCGGTTCTAGCATACTAACTTATATTAGCACACCCTGAATTATGCTTATCATTTGAGGAACGTTTCTTACCTCCTGGAGGACGACCATGAAGTTTCCAACACTGATCCTTAGTGTGTCATTTTTCTTGGAATGCTCATAGATAGGAATCGGTTTCTTGTTGTTCTTCTAACTATCATGGGTAGAGGATCTAATCTAGCATTGACGGCAACAAAGTCAGTAGTAGGAGTAGTCAGGACACTCATGGCACTCGTACGATTTTCTTCAAGACGAAATTCACAACGCTTCCATTAAAGAGGAAAGGGGTCTCTGGCCAAGTAACGACCACAAACAATGTCAAACTTGGGGTTCAGACCTGCAAGGAAATCATAAATCCGATCAATTTCTTCAAGTCTAGCATTCTGTGTGCCATCATTCGGAGTATTCTTTACTATCTCTCTACACAGGCCCATCTCTTACCTAAGTTGGGAAAGTTCATTGAAGTAGGATGTTACATCCAGAGTTCCTTGCTTGCAATCATGAACTTGTTTCCTCAGTGTATACAGATGAGAGACGTTTCAAATAGAGTTTCTAATTAGTGTCCCATAGATCCTTTGCAGTTGTTGCATAGAGCATAGACTTGCCAATTTGTGGTCCCATACTATTAATCAACATGGACCGAAGAAGGGAGTCCTCCCCCTCTCCAGAAACGTCCTTGGGCATCATGGGTGGGGGACCAAGAGTCTCCCCTGTTAGAAAACTAAATTGCTCACGTCCCTCAATAAACATTTTGACCGATTGAGACCAAGAAAAGTAGATTTGGCCATTTAGCTTCTCTTCTGGAATACCTGTAGATGGTGCTAGAGAATAGTTAAATAATTTGAGGACAAAGTAGGAAACAAAGTTACCGAGTTCTTGGAATACATCAGCAAGTTGGTTGGCTTGGATTGTGTCGAAGATTCACCAACTTCAGACCCTGATTTATTATGGAGTTGATTGATTCCAGTACCACGGATGTCTGACTGATTTAAAGAATTGGAGGGCAGTGTGTGAAAGGAGGGCAGACGCGGTTGACCAAAAGAGTATTGCTGCTGGACTTGGGAAATCAGGTGGGAGTAGGCTAGCTGAACAGTGGAGGAGTTGGAATGCGGTGTGTGGGCGGAAAGGCTGGGCGTGTTTGGCTTGTTTCCTCCACTAGGTGGCGCGGCTGGCTCCAAGGGTAAAGATAGAACTACTCACTGGTGGTTTCTGAAGGTGTTGGAGTAGTTTTTCCACAGCTGCATTGATCTCGGCGGCGGCGTTGGCTGTCTCGTGGTCAGTTTGGGTTTCACCAAGATTGGCGTCTAAGGTTTCATCTTTACTTCATTCTGATACCATATTAAAGCGGTAAAAGAAAATAAAGACTGAGTTACGTGGAAACTTGACTACCAGAAGAAAAACCATGATCTGACTTTCTTTTATTATTTCTTTTGAATAAAAGATACAAAGAAGACAAATAAATAGATAACTAAGCTTATGATAAAATGATTGGGTCAAGCCCACTAATTCTAACACTATAAGCAAACGAAAACTAGGTGAATCCTCTGGTAACATTGAAAATTTGATTTTGTGTAATATGGTGCTAGACTGCTAGTGTTTTGCTGTAATCATCAGTACTCACGTTTCCCTTGACAACAGGTTGAAGCTTTGGCTCTTCTTCGCTTATGTGGTATCATTCGTTTCATTAGCAGCATCGGTTGGACTCTTGATACAAGATTCAGTAGTAAAAGCCGGGCCATCAGTGTGGACAGGAGTTGCAGGAGTGTTGCAGTGTGTGTTTGTGTTGGTTAGGTAAATGCCCTTCCTCGTTTTGATTATTTTACTTCTTACTTTTCCTGTCTTCTATTTGGGTTTGTGCCAATTAACATGTAATTACTTTTTATAGTTTAATCATCTACTCCACCTAGTTTGTTGTGGAATCTTTCCGCAAGACAACTTTCTGAAAGAAGACTTTTACGGTTCTTTTGTTATGTTTTTTCTCTTGATTTCTGAGCATGACCTGTACTTAACATCTGTTTTTCATTCTCTCTAAATCATATGATGTTTTAGATTATTTTCTAAAAGAAGTTTGCTTGAGCTGGGATGTTTTCTGTTTAGCAATCTAATGTTGAATCAACAGATGCCTTGAATTTTGTTATTTGTTTCATTATTTCTGGAAAAATATGAAATCCAATTATTTTGGGGGGTTTCATCACTAGCTCGCTAATGCCATCTCTGAGGATTACGGGATTTTTTTTATTAGCTTATAATGTTTTCTGTTTTTCTGAAATACTGGCTGTTTCAGTGGGTTGATTTACTGGACTTCTCACTCGGAGTAAGTTGGAAAAAATTATGCACCAAGGCAAGATCTCAAAAGCTGAAGAGTCTACCAACTGTATAGAGCTCCAGTCTGCACTGCAATGTCGAGTAATTTGTTTGTGTCTATTGACCTGAACCCGAGAGCCTTTTTACTTTTTGTAAATGTCATGTGTTAAATCATAAGCTGAAACTATGTCTATATGTCTTTATGAATTCAATATAAGTGAGCCAGATATTTAATGTTTAGACTTTTGTTCTTTTATTTCTTCAAAATCAAATGTTTTCTCTGCAAAAGAAAAAAAAAAGAAAATATAACTATGGTCATGTAGAAGAACCCATACTCATTAAATTTAGATAAAGTTATTGTCATTTGAAAACAAAAATTACCAATCCATTT

Coding sequence (CDS)

ATGGATTTGGCGGAGCTTTGGTCAATTTTCGGCCCAGGCGTTGCCGGAGCTGTGTTTGGCGCCGGATGGTGGTTCTGGGTTGACGCCGTTGTCTGCAGTTCTGTTGCCGTCTCCTTTGTCCACTACCTCCCAGGTATTTTTGCTTCTTTTGCGGCTTTGATGTTCAATTGCGTTCGAAAAGAAGACATCGATTATTCTCCATACGAGGAGGGGGAATGGAGGTTGAAGCTTTGGCTCTTCTTCGCTTATGTGGTATCATTCGTTTCATTAGCAGCATCGGTTGGACTCTTGATACAAGATTCAGTAGTAAAAGCCGGGCCATCAGTGTGGACAGGAGTTGCAGGAGTGTTGCAGTGTGTGTTTGTGTTGGTTAGTGGGTTGATTTACTGGACTTCTCACTCGGAGTAA

Protein sequence

MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRKEDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCVFVLVSGLIYWTSHSE
Homology
[Close]
BLAST of Cucsat.G7729 vs. ExPASy Swiss-Prot
Match: Q9CXL1 (Transmembrane protein 50A OS=Mus musculus OX=10090 GN=Tmem50a PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.7e-08
Identity = 40/127 (31.50%), Postives = 59/127 (46.46%), Query Frame = 0 

Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCV 60
           MD  E  +      AG +F  GWW  +DA V       F H  +  G+ A+ A LM N V
Sbjct: 14  MDWGEKRNTIASIAAGVLFFTGWWIIIDAAVMYPRMDQFNHSYHTCGVIATIAFLMINAV 73

Query: 61  RKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAG 120
               +    Y E   G+   ++WLF  ++++F SL AS+ +L    V K    V+ G+A 
Sbjct: 74  SNGQVRGDSYSEGCLGQTGARIWLFIGFMLAFGSLIASMWILFGGYVAKEKDVVYPGIAV 133

Query: 121 VLQCVFV 123
             Q  F+
Sbjct: 134 FFQNAFI 140

[Close]
BLAST of Cucsat.G7729 vs. ExPASy Swiss-Prot
Match: O95807 (Transmembrane protein 50A OS=Homo sapiens OX=9606 GN=TMEM50A PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.0e-08
Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = 0 

Query: 15  AGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCVRKEDIDYSPYEE-- 74
           AG +F  GWW  +DA V       F H  +  G+ A+ A LM N V    +    Y E  
Sbjct: 28  AGVLFFTGWWIIIDAAVIYPTMKDFNHSYHACGVIATIAFLMINAVSNGQVRGDSYSEGC 87

Query: 75  -GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCVFV 123
            G+   ++WLF  ++++F SL AS+ +L    V K    V+ G+A   Q  F+
Sbjct: 88  LGQTGARIWLFVGFMLAFGSLIASMWILFGGYVAKEKDIVYPGIAVFFQNAFI 140

[Close]
BLAST of Cucsat.G7729 vs. ExPASy Swiss-Prot
Match: Q3SZL9 (Transmembrane protein 50B OS=Bos taurus OX=9913 GN=TMEM50B PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-05
Identity = 36/123 (29.27%), Postives = 56/123 (45.53%), Query Frame = 0 

Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCV 60
           +D +E  +     VAG +F  GWW  +DA V         H  +  G+F++ A  M N V
Sbjct: 16  IDWSERRNAVASVVAGILFFTGWWIMIDAAVVYPKPEQLNHAFHTCGVFSTLAFFMINAV 75

Query: 61  RKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAG 119
               +    YE    G    ++WLF  +++ F SL AS+ +L   + V     V+ G+A 
Sbjct: 76  SNAQVRGDSYESGCLGRTGARVWLFIGFMLMFGSLIASMWILF-GAYVTQNTDVYPGLAV 135

[Close]
BLAST of Cucsat.G7729 vs. ExPASy Swiss-Prot
Match: P56557 (Transmembrane protein 50B OS=Homo sapiens OX=9606 GN=TMEM50B PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-05
Identity = 36/123 (29.27%), Postives = 56/123 (45.53%), Query Frame = 0 

Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCV 60
           +D +E  +     VAG +F  GWW  +DA V         H  +  G+F++ A  M N V
Sbjct: 16  IDWSERRNAVASVVAGILFFTGWWIMIDAAVVYPKPEQLNHAFHTCGVFSTLAFFMINAV 75

Query: 61  RKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAG 119
               +    YE    G    ++WLF  +++ F SL AS+ +L   + V     V+ G+A 
Sbjct: 76  SNAQVRGDSYESGCLGRTGARVWLFIGFMLMFGSLIASMWILF-GAYVTQNTDVYPGLAV 135

[Close]
BLAST of Cucsat.G7729 vs. ExPASy Swiss-Prot
Match: A9CAZ8 (Transmembrane protein 50B OS=Papio anubis OX=9555 GN=TMEM50B PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-05
Identity = 36/123 (29.27%), Postives = 56/123 (45.53%), Query Frame = 0 

Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVH--YLPGIFASFAALMFNCV 60
           +D +E  +     VAG +F  GWW  +DA V         H  +  G+F++ A  M N V
Sbjct: 16  IDWSERRNAVASVVAGILFFTGWWIMIDAAVVYPKPEQLNHAFHTCGVFSTLAFFMINAV 75

Query: 61  RKEDIDYSPYEE---GEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAG 119
               +    YE    G    ++WLF  +++ F SL AS+ +L   + V     V+ G+A 
Sbjct: 76  SNAQVRGDSYESGCLGRTGARVWLFIGFMLMFGSLIASMWILF-GAYVTQNTDVYPGLAV 135

[Close]
BLAST of Cucsat.G7729 vs. NCBI nr
Match: XP_004140320.1 (transmembrane protein 50A [Cucumis sativus])

HSP 1 Score: 253 bits (646), Expect = 1.12e-84
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 

Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60
           MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120

Query: 121 FVLV 124
           FVLV
Sbjct: 121 FVLV 124

[Close]
BLAST of Cucsat.G7729 vs. NCBI nr
Match: XP_008460472.1 (PREDICTED: transmembrane protein 50A [Cucumis melo])

HSP 1 Score: 251 bits (642), Expect = 4.58e-84
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0 

Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60
           MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVK GPSVWTGVAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120

Query: 121 FVLV 124
           FVLV
Sbjct: 121 FVLV 124

[Close]
BLAST of Cucsat.G7729 vs. NCBI nr
Match: XP_038874577.1 (transmembrane protein 50A [Benincasa hispida])

HSP 1 Score: 251 bits (641), Expect = 6.51e-84
Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 0 

Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60
           MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSF+HYLPGIFASFAALMFNCVRK
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFIHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVK GPSVWTGVAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120

Query: 121 FVLV 124
           FVLV
Sbjct: 121 FVLV 124

[Close]
BLAST of Cucsat.G7729 vs. NCBI nr
Match: XP_022993057.1 (transmembrane protein 50A [Cucurbita maxima] >XP_023549618.1 transmembrane protein 50A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250 bits (639), Expect = 1.31e-83
Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 0 

Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60
           MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVR+
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRR 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVK GPSVWTGVAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120

Query: 121 FVLV 124
           FVLV
Sbjct: 121 FVLV 124

[Close]
BLAST of Cucsat.G7729 vs. NCBI nr
Match: XP_022141734.1 (transmembrane protein 50A [Momordica charantia])

HSP 1 Score: 249 bits (636), Expect = 3.77e-83
Identity = 121/124 (97.58%), Postives = 122/124 (98.39%), Query Frame = 0 

Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60
           MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSFVHYLPGIFASFAALMFNCVRK
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDS+VK GPSVWTGVAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGVAGVLQCV 120

Query: 121 FVLV 124
           FVLV
Sbjct: 121 FVLV 124

[Close]
BLAST of Cucsat.G7729 vs. ExPASy TrEMBL
Match: A0A1S3CCJ8 (transmembrane protein 50A OS=Cucumis melo OX=3656 GN=LOC103499276 PE=3 SV=1)

HSP 1 Score: 251 bits (642), Expect = 2.22e-84
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0 

Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60
           MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVK GPSVWTGVAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120

Query: 121 FVLV 124
           FVLV
Sbjct: 121 FVLV 124

[Close]
BLAST of Cucsat.G7729 vs. ExPASy TrEMBL
Match: A0A6J1JRP9 (transmembrane protein 50A OS=Cucurbita maxima OX=3661 GN=LOC111489187 PE=3 SV=1)

HSP 1 Score: 250 bits (639), Expect = 6.36e-84
Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 0 

Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60
           MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVR+
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRR 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVK GPSVWTGVAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120

Query: 121 FVLV 124
           FVLV
Sbjct: 121 FVLV 124

[Close]
BLAST of Cucsat.G7729 vs. ExPASy TrEMBL
Match: A0A6J1CJN8 (transmembrane protein 50A OS=Momordica charantia OX=3673 GN=LOC111012019 PE=3 SV=1)

HSP 1 Score: 249 bits (636), Expect = 1.82e-83
Identity = 121/124 (97.58%), Postives = 122/124 (98.39%), Query Frame = 0 

Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60
           MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSV VSFVHYLPGIFASFAALMFNCVRK
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVPVSFVHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDS+VK GPSVWTGVAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGVAGVLQCV 120

Query: 121 FVLV 124
           FVLV
Sbjct: 121 FVLV 124

[Close]
BLAST of Cucsat.G7729 vs. ExPASy TrEMBL
Match: A0A6J1FCW9 (transmembrane protein 50A-like OS=Cucurbita moschata OX=3662 GN=LOC111444629 PE=3 SV=1)

HSP 1 Score: 248 bits (633), Expect = 5.23e-83
Identity = 121/124 (97.58%), Postives = 122/124 (98.39%), Query Frame = 0 

Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60
           MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFAS AALMFNCVR+
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASIAALMFNCVRR 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVK GPSVWTGVAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGPSVWTGVAGVLQCV 120

Query: 121 FVLV 124
           FVLV
Sbjct: 121 FVLV 124

[Close]
BLAST of Cucsat.G7729 vs. ExPASy TrEMBL
Match: A0A6J1JKY2 (transmembrane protein 50A-like OS=Cucurbita maxima OX=3661 GN=LOC111487827 PE=3 SV=1)

HSP 1 Score: 245 bits (625), Expect = 8.69e-82
Identity = 120/124 (96.77%), Postives = 121/124 (97.58%), Query Frame = 0 

Query: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFVHYLPGIFASFAALMFNCVRK 60
           MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSF+HYLPGIFASFAALMFNCVRK
Sbjct: 1   MDLAELWSIFGPGVAGAVFGAGWWFWVDAVVCSSVAVSFLHYLPGIFASFAALMFNCVRK 60

Query: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCV 120
           EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVK G S WTGVAGVLQCV
Sbjct: 61  EDIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKTGLSAWTGVAGVLQCV 120

Query: 121 FVLV 124
           FVLV
Sbjct: 121 FVLV 124

The following BLAST results are available for this feature:
BLAST of Cucsat.G7729 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9CXL14.7e-0831.50Transmembrane protein 50A OS=Mus musculus OX=10090 GN=Tmem50a PE=1 SV=1[more]
O958078.0e-0832.74Transmembrane protein 50A OS=Homo sapiens OX=9606 GN=TMEM50A PE=1 SV=1[more]
Q3SZL92.8e-0529.27Transmembrane protein 50B OS=Bos taurus OX=9913 GN=TMEM50B PE=2 SV=1[more]
P565572.8e-0529.27Transmembrane protein 50B OS=Homo sapiens OX=9606 GN=TMEM50B PE=1 SV=2[more]
A9CAZ82.8e-0529.27Transmembrane protein 50B OS=Papio anubis OX=9555 GN=TMEM50B PE=3 SV=1[more]
BLAST of Cucsat.G7729 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140320.11.12e-84100.00transmembrane protein 50A [Cucumis sativus][more]
XP_008460472.14.58e-8499.19PREDICTED: transmembrane protein 50A [Cucumis melo][more]
XP_038874577.16.51e-8498.39transmembrane protein 50A [Benincasa hispida][more]
XP_022993057.11.31e-8398.39transmembrane protein 50A [Cucurbita maxima] >XP_023549618.1 transmembrane prote... [more]
XP_022141734.13.77e-8397.58transmembrane protein 50A [Momordica charantia][more]
BLAST of Cucsat.G7729 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CCJ82.22e-8499.19transmembrane protein 50A OS=Cucumis melo OX=3656 GN=LOC103499276 PE=3 SV=1[more]
A0A6J1JRP96.36e-8498.39transmembrane protein 50A OS=Cucurbita maxima OX=3661 GN=LOC111489187 PE=3 SV=1[more]
A0A6J1CJN81.82e-8397.58transmembrane protein 50A OS=Momordica charantia OX=3673 GN=LOC111012019 PE=3 SV... [more]
A0A6J1FCW95.23e-8397.58transmembrane protein 50A-like OS=Cucurbita moschata OX=3662 GN=LOC111444629 PE=... [more]
A0A6J1JKY28.69e-8296.77transmembrane protein 50A-like OS=Cucurbita maxima OX=3661 GN=LOC111487827 PE=3 ... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007919Uncharacterised protein family UPF0220PFAMPF05255UPF0220coord: 13..133
e-value: 6.8E-24
score: 84.3
IPR007919Uncharacterised protein family UPF0220PANTHERPTHR13180SMALL MEMBRANE PROTEIN-RELATEDcoord: 3..135
NoneNo IPR availablePANTHERPTHR13180:SF3OS02G0566900 PROTEINcoord: 3..135

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G7729.T1Cucsat.G7729.T1mRNA
Cucsat.G7729.T3Cucsat.G7729.T3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway
cellular_component GO:0016021 integral component of membrane