
Cp4.1LG16g04820 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTGGTTGCTCTGTTTCCGACCCGCCATTGACATGGGAACCGTCCTCGAAACAAAACCCACCACCACTTTGGCGGCCTATCTTGACCTTGAAGATGACGAAACAACAACTTCTAAAATCGACCCATCCTGCCCCAGTTGTCGATGATCCAGAAATTCCGGCCGAGACTGCTCCACCATTTCTCGCCCACCAAAGCGTAATCTTTCTCGGACGGCCAGAGCCATCGTGTTTGGTACCATTCTGGTCAGTAGTGATTTGGTGTAGTTTAATTGTTTTCAACTTTGTTCGTTCTTTTAGCACGTGGGTCTTTTTTGTTCCTCTGTTTTAGATAAAAAAAGTTCGTGAGAAAAGAAGCAACCACCAACAGAAATCTGCCGGCCGGAAACAATGTTCATCCCTGGATTCCGGAAGTTCTCCGGTAGACGGAATTTACCAAAAAAACAGAGACAACCAACTAGTGGGAGTGGAGCCATCTGGGTCATCTCAGTCTTTTCCAATTTCAATATCTAAACCCAAAATTTCGGAAAAGAAAGCCAGTGGGAGCGGAACCATCGGTGCGAGGCAGGGGAGTTGCTATGCATTCAATTCCGGCGTTGGTTTGCTATTAGTGAGTTTCGGAGTGACAGTGATGCAGGGGAGAGTGATTGCCATCTTAATCACATCAATTTGGGTTTACTTTTTTGCTTGGATGCACATGGAGGATCGCTGGCTGAGGAAGAAACCGACAGAATTTGCAGAAACAGAGGTGAGGGACACTCTGAGGAGTGGCTGTCGGAACACAATCGGACCTCTGTTTCGTGTT CTTGGTTGCTCTGTTTCCGACCCGCCATTGACATGGGAACCGTCCTCGAAACAAAACCCACCACCACTTTGGCGGCCTATCTTGACCTTGAAGATGACGAAACAACAACTTCTAAAATCGACCCATCCTGCCCCAGTTGTCGATGATCCAGAAATTCCGGCCGAGACTGCTCCACCATTTCTCGCCCACCAAAGCGTAATCTTTCTCGGACGGCCAGAGCCATCGTGTTTGGTACCATTCTGGTCAGTAATAAAAAAAGTTCGTGAGAAAAGAAGCAACCACCAACAGAAATCTGCCGGCCGGAAACAATGTTCATCCCTGGATTCCGGAAGTTCTCCGGTAGACGGAATTTACCAAAAAAACAGAGACAACCAACTAGTGGGAGTGGAGCCATCTGGGTCATCTCAGTCTTTTCCAATTTCAATATCTAAACCCAAAATTTCGGAAAAGAAAGCCAGTGGGAGCGGAACCATCGGTGCGAGGCAGGGGAGTTGCTATGCATTCAATTCCGGCGTTGGTTTGCTATTAGTGAGTTTCGGAGTGACAGTGATGCAGGGGAGAGTGATTGCCATCTTAATCACATCAATTTGGGTTTACTTTTTTGCTTGGATGCACATGGAGGATCGCTGGCTGAGGAAGAAACCGACAGAATTTGCAGAAACAGAGGTGAGGGACACTCTGAGGAGTGGCTGTCGGAACACAATCGGACCTCTGTTTCGTGTT CTTGGTTGCTCTGTTTCCGACCCGCCATTGACATGGGAACCGTCCTCGAAACAAAACCCACCACCACTTTGGCGGCCTATCTTGACCTTGAAGATGACGAAACAACAACTTCTAAAATCGACCCATCCTGCCCCAGTTGTCGATGATCCAGAAATTCCGGCCGAGACTGCTCCACCATTTCTCGCCCACCAAAGCGTAATCTTTCTCGGACGGCCAGAGCCATCGTGTTTGGTACCATTCTGGTCAGTAATAAAAAAAGTTCGTGAGAAAAGAAGCAACCACCAACAGAAATCTGCCGGCCGGAAACAATGTTCATCCCTGGATTCCGGAAGTTCTCCGGTAGACGGAATTTACCAAAAAAACAGAGACAACCAACTAGTGGGAGTGGAGCCATCTGGGTCATCTCAGTCTTTTCCAATTTCAATATCTAAACCCAAAATTTCGGAAAAGAAAGCCAGTGGGAGCGGAACCATCGGTGCGAGGCAGGGGAGTTGCTATGCATTCAATTCCGGCGTTGGTTTGCTATTAGTGAGTTTCGGAGTGACAGTGATGCAGGGGAGAGTGATTGCCATCTTAATCACATCAATTTGGGTTTACTTTTTTGCTTGGATGCACATGGAGGATCGCTGGCTGAGGAAGAAACCGACAGAATTTGCAGAAACAGAGGTGAGGGACACTCTGAGGAGTGGCTGTCGGAACACAATCGGACCTCTGTTTCGTGTT LGCSVSDPPLTWEPSSKQNPPPLWRPILTLKMTKQQLLKSTHPAPVVDDPEIPAETAPPFLAHQSVIFLGRPEPSCLVPFWSVIKKVREKRSNHQQKSAGRKQCSSLDSGSSPVDGIYQKNRDNQLVGVEPSGSSQSFPISISKPKISEKKASGSGTIGARQGSCYAFNSGVGLLLVSFGVTVMQGRVIAILITSIWVYFFAWMHMEDRWLRKKPTEFAETEVRDTLRSGCRNTIGPLFRV Homology
BLAST of Cp4.1LG16g04820 vs. NCBI nr
Match: XP_022944613.1 (uncharacterized protein LOC111449019 [Cucurbita moschata]) HSP 1 Score: 295 bits (754), Expect = 9.47e-98 Identity = 149/159 (93.71%), Postives = 154/159 (96.86%), Query Frame = 0
BLAST of Cp4.1LG16g04820 vs. NCBI nr
Match: KAG7010708.1 (hypothetical protein SDJN02_27504, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 292 bits (747), Expect = 1.10e-96 Identity = 148/159 (93.08%), Postives = 153/159 (96.23%), Query Frame = 0
BLAST of Cp4.1LG16g04820 vs. NCBI nr
Match: KAG6570858.1 (hypothetical protein SDJN03_29773, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 285 bits (728), Expect = 8.49e-94 Identity = 146/159 (91.82%), Postives = 151/159 (94.97%), Query Frame = 0
BLAST of Cp4.1LG16g04820 vs. NCBI nr
Match: XP_022986371.1 (uncharacterized protein LOC111484130 [Cucurbita maxima]) HSP 1 Score: 282 bits (721), Expect = 9.83e-93 Identity = 144/159 (90.57%), Postives = 149/159 (93.71%), Query Frame = 0
BLAST of Cp4.1LG16g04820 vs. NCBI nr
Match: XP_008448227.1 (PREDICTED: uncharacterized protein LOC103490482 [Cucumis melo] >TYJ96630.1 uncharacterized protein E5676_scaffold464G00420 [Cucumis melo var. makuwa]) HSP 1 Score: 134 bits (338), Expect = 5.26e-35 Identity = 86/157 (54.78%), Postives = 102/157 (64.97%), Query Frame = 0
BLAST of Cp4.1LG16g04820 vs. ExPASy TrEMBL
Match: A0A6J1FY81 (uncharacterized protein LOC111449019 OS=Cucurbita moschata OX=3662 GN=LOC111449019 PE=4 SV=1) HSP 1 Score: 295 bits (754), Expect = 4.59e-98 Identity = 149/159 (93.71%), Postives = 154/159 (96.86%), Query Frame = 0
BLAST of Cp4.1LG16g04820 vs. ExPASy TrEMBL
Match: A0A6J1JAX0 (uncharacterized protein LOC111484130 OS=Cucurbita maxima OX=3661 GN=LOC111484130 PE=4 SV=1) HSP 1 Score: 282 bits (721), Expect = 4.76e-93 Identity = 144/159 (90.57%), Postives = 149/159 (93.71%), Query Frame = 0
BLAST of Cp4.1LG16g04820 vs. ExPASy TrEMBL
Match: A0A5D3B9T8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold464G00420 PE=4 SV=1) HSP 1 Score: 134 bits (338), Expect = 2.55e-35 Identity = 86/157 (54.78%), Postives = 102/157 (64.97%), Query Frame = 0
BLAST of Cp4.1LG16g04820 vs. ExPASy TrEMBL
Match: A0A1S3BK26 (uncharacterized protein LOC103490482 OS=Cucumis melo OX=3656 GN=LOC103490482 PE=4 SV=1) HSP 1 Score: 134 bits (338), Expect = 2.55e-35 Identity = 86/157 (54.78%), Postives = 102/157 (64.97%), Query Frame = 0
BLAST of Cp4.1LG16g04820 vs. ExPASy TrEMBL
Match: A0A5A7TYI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00310 PE=4 SV=1) HSP 1 Score: 134 bits (338), Expect = 2.62e-35 Identity = 86/157 (54.78%), Postives = 102/157 (64.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|