Cucsat.G9006.T6 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGAAGAGTATGGTTTGGGGTAATACGATAAATAATCTATGGAAGAAAAGGGGAGTAAGAAATATACAAATAATATAATTTCTGTCTCTCTCCTTTTCTCTAATCTAATGGAGGAGTTGGCTTTGCTGACAATTCCCGTCAAAAGAAAAAGCGGCAAAAGCCGAGGGGCCATAGCCATAGCACATTTCACATAGCACACACGATTCATTCCAATTTCTCTTCCTTTCCATTTCTGTTTTCTTCTCTTTGTTCCTCATAATCCCATCTGTCTCTCCATTTACTCTTTTTTTTCCCTTCATTTCTAATTACCCATCTCCCAAAATCCGGTCTGGCAGCGATCAATTATGGTTTCTCTCTTCGATTCCTCGTTTCAGGTATTGGGTTGATCTTAATTTTTCGTTTGGTTCCAGAATCGGGGTTTGCCTTTGTTGTCATACTGCTCTTTTAGCTTGATCTTGTGTTTATGTTTTTCTACTTTTTCAAGTATTGGTGTTTCTTTGTTGACCTTGTTAGTTTTGTGCTTTTCGTTTAATCTGGCAGATATAATTGATTGGGTTAGAAGCATGCGGGAAGAGGGAGACAGATATGAGATTGACAATGGAAATGGGGTTTCGTGTTAGGAAATTTGTAGTCGTATCTATCAGAACTTGCTACAGATCAGTTCGTAACTATCCGTTTCTTTTCGGGTTGCTGTGTTTTTTGATTCTTCTGTATAGATCGTGTCCGTTTTTGTTTTCCCTTTTGGTGTCTGCGTCCCCTGTTTTGATTTGCACAGCTGTTTTGCTTGGAACTCTTCTGAGTTATGGGCAGCCTAATATACCTGAAATTGAAACGGAGGAGAAGGTTTCACGTGATGTAGCTTCTTTGAGATCTGGGATTTTGGACAATGCTACTGTTGTTGCTAAGGAGGATGATAGTTTTACTGTAGAGAGATTTGAAGGTAATGAAGTAGAAAATTCTTATGTGGTAAGGGGTCCGGAAGAAGAGCGGAAGACAGGCAAGCTTGATGAACATGCTGGTTTTGTTGACTTTGTCCAGGTGATCCATGAACGCAATCGTGAAATTCAGTTTGAGAAGGGTGGTATTGAGGAGTTTGAGGAGTTTGAGAAGGGTGAAGTTGAGAAGGCAGCAGGAGAGAAGGAATTCCATAACTCAGAGTTGGAGGAAAGGAGAGAAATTTATAAAAAGGATTTGGATATTAGAAATTTGGCAACAGATGATGAAAATGCTGTGGAGAACCAGCTTTTGGCTGCCCAAAGCATGAGAAATGAGATTCTTGAAGTAGAAGATCGTAACATATCAATAGAACCTGTTCATAAAGGTGATCATCTAAGCTTATCTCTCAATGATAAAGATGATCATGATGAAAATGGTTATGATTCTTCAGGTTCTGAATCTGATAGAGCAGAAAGCTCTTCGCCTGATGCCTCAATGGCTGATATCATACCTTTGCTGGATGAGTTGCACCCTCTCTTGGACTCAGAAACTCCACTACCTGCCCATAGGTCGAATGAAGAGTCAGATGCTTCTTCAGAACAATCTCATAAAAGTGATGGTGAATGTGTGATGTCAGATGATGAGGCTGAAAATCAAGGAGAAGAAGGTGGTGTTGTTGAACATGATGAGGATGAGGATGACGACGACGATGAGGGGATGCAGGAAGAGAAAGAGGATGAGAGCAAATCTGCTATCAAGTGGACAGAGGATGATCAAAAGAATCTCATGGATTTGGGAAGTTTAGAGCTAGAGAGGAATCAGCGTTTGGAAAATCTCATTGCAAGGAGAAGAGCAAGGAACAACTTGAGAATGTTGGCTGGGAAGAATTTGATAGATTTGGATGGTTTTGAACTTCCTGCAAACGTACCACCCATATCTACAGCCAGACGTAACCCATTTGATCTCCCTTATGATTCATACAGTAATATGGGATTACCACCAATTCCTGGGTCTGCTCCATCCATTTTGTTGCCAAGACGTAATCCATTTGATCTCCCATATGATTCAAATGAAGAAAAACCAGATCTCAAGAGTGACGACTTTGAACAAGAATTTTTGGCACCTCAACAGAAAGATATGTTCCGAAGACATGAAAGTTTCAGTGTGGGCCCCTCAAACTTTGCAGTTCCCAAGCTAGAGCAGCAGAATATTAGATGGAAACCATATTTCATGCCTGAAAAAATAGCTGCCGAAGGAACAAGCTACTCACCACTGGAGAGACAATTTAGTGAAGTCAGTGAATCAAAAATGAGTTCTGTTTCCGATACCGAATCAATGAGTTCTATTGCAGATCAGGATGACAAGAAGCCTGATGAATCACAGTCTTTTCTGGAAACAACAGCGGTTTCTTATCTTCACCCCACAGCCAGTGGTATTGAGCATGGAAATGGGCCATGGGAGGATATAGGCTCTGAAGATTATGTACAAGAAAACAGAGATGTGCATCATGAAGTGATTGAGATAACTTTGGGATCTACCGAGAGTCATTTTGAGAGCCAATCTGGATCCTCTGCCATCAGAGGTGCAGATACCCCATTGGAGATTAATGCCAGTGAAATTCACTCCAAAAATGTATTAGTTGAAACGGATTTCAGCAGCAATTCCAGCTTGTCTTCATTGTCAGAAGAAGAAAATGAAACGGCATTTGAGGTCAAAACAGATGAGGTGAAACCAAGTAGCAATCATACAGAGGAATCTAGCATCGATACTACGAACATATCAGTGCCAGCCCTTGAAGAAGATGGAGACTTCAAGCATGCCAGTGAAGTGTTGGATGACAATCAGCATAGGGAGCCTGTTTACGACTCAAGCCCTTCAGCAGAAGGTAAGCTCTCATTTTCACCTGTTTCTTCTGATATGTATACAGAAATAACCAATATATGGGCCCTCTTCTTTCTTTCTTTTGTTTTTTTTGTTGACACAATTGACCTCTTTTCAGGTAAGGAATCTGAAGTTCATTCTGAAATAGAGCAGGACATCACTTCCAGTTTGAAAGATATGGATGATGTCTCCTCAGGGTTACATATAGTCAATAAAAATGAACAAGAGTCGAGGGAAGTTTCTGAAGTTATTGTTCATGAGGTTACAAAGGTCAAGTCCCCCAAACACGACACCAATTATGATGCTCAAAACTTATCTGTGGTCCCTGAATTTTCAGTTGAGGATGTTTCAATAAATTCTGGTCCGTCCTTCTCAGACAATGCCCCGATGGAGAAAGGAATAGTTGATAGTGTGAAGGAAGATAAAGATCGGCTGACAAGTCATGTGGAGGATATTGTTGATGGAGTTCACAAAATTGAAGATGAGAATCTAGATTCCTCACCTTCATGTGATAAGATATCTTCTCGGAGTCTGACTTTTACCGAACCAGAGGACAAACTGTCTTCAGCCGTAAACCATGTTTCAGCAGATATTGGGTCACCTTCAAATGCTAAACATGTAGAAATGCATGAAACAGTAAATAACGAAGAAAGTCCTGAACTTGAACAAACAAAAGTCGCTAGATCAAGTTCATTGGATAGCAGTTCTGTGCGGGAAGTAATTTTACAAACTGATGTTGTTTGTCATACTGATCAACCTACTACTTCTATATTAAATCTTGGTTCAGAAATCCCTGCTCAGGACACCAATGACCTGATTGGAACGAATGATTCTGGGTCTATTTCTCATGACCATTTGACTACTACCAATGCAACCATTCCTGAATCACAGGAACAAAAGTGTCCAGAGGTGGAGGAGCAAGTTGAATTGATTTCTTTGAGTTCGACACTTCCTCCTAAATTTGAGCAAGTTGAGGAGCAGTCGATGAACGAAAAAGAAGTTGTTAGGTCTGAACAAGATATTGTTGAGCCCTCAAGTGTCAAGTCACACACAGAGAGTGAAGACCTGCAAAATTTGGATATAAAAAATTCTTCTTCAGGTTCTAGTACTTCTGACGTGACTCCTGAAGTTATTTCATCTGTTACTGAATTAGGGCAGTCGTGGTCAGACAAGTCAATGGTTGAACCTGTTCTTAGTAACCGTGACAATGCTCAGGTAAGTGCTGCTAGATTAGTGATCTTTTGCATACTTTTTATGTTGATCTCTTTCTATGACATCAAGGATCTTAAAAGATCCAAATATTGCTATTACATCAATGATCTTGAAAAGATCCAATCCCAGAGTTACTTGTGTATCATAATGTTGCTTCCATCATGGATTAGATATTGGTCAAACTTGATAAATAATTATTATATTTGCCATGGCCTGTGGATAATCTTATCTGCGTGGTCTTATTTTCATGAGATCGAGCACACCACTGTAGCTTTCGCTTTTAGCTGATCTGAGTATGATAATTATTGTACCATGATACCATGTTATTTAATGAAGTGTTGTGACTTTATGAGAAGTAATATAATCATAGTTTGAATTTAGTGAATTAAAATGACGATATCAAGCTGATATTTTGCAGGAACCAGGTGATTTTTCGACAGATTTTGCTGCTGAAGTAATCTCTGAAAATACATCACCAAGTGTTCATCAAGACATTTCGGCTGCTCAATCTTCTGTAGAACCTGATTCCCCCTCATGTTCGTCAGATAATGACTTCAGTTCACCCAGTACTGGAAGGTATCCAAAAGATGGCAAGGATGGAGTTGTATTTCAGGATCGTGAGGATGTTTCGAAGCATTTGGACTTTCTGGCAGAAGCATATGGATATCGTTTTTCAGAAAAGACGATTAGGGAAGAGGTAGATGAAATAGCAGATATTGATGAAGGTTTGTTATTGGAATTGGAGGAAGTTGGGGATTTCAGCGTCAAAGAAGTTGGGGAACCAGTTCTTGAGAAAAAGGTACTCCCAGAGGAAGCTCAAGAAGAAAGATTTGAATTGGGTTCTAATTCCAATTCGACAGAAGCTAAATCAGATATACCAATTCTTGAAGCAAGAACACTGGCTGATATCAACTTGGCCTTTAGGCAACTCCAAGAAGGGGGTAGATGTGGAGGATGTCATTCTCCTCAGTGCGATTGAAAGCCAAGTTAATGAAGACGCCAAACCCGAAACAAGTTCAGATTTGGAGGTTGTGGAAGCGAGATCCCTGGGAGATATTCATGACGCAGTGTTGCATGCATTGGAGAGTAATATTGATGAACTAGGATCTAGTTCCAACAGCTCAGAAACCAAATCGGATATACCAATGCTTGAAGCAAAATCACTCGATGATATCAACTTTGCTTTTAGGCAACTCCACGATGGAGTTGACGTGGAGGACGTCATTGAAGTTAATAGCCAAGTTACCGTAAAAGCCAAGCCTGAAACAAGTTCGGATTTGGAAGTCGTTGAAGCAAGATCTTTGGGAGATATCCATGTTGCTTTGATGCAACTCTCGGAGAAAAACATAGATGAGTCAGGTTCTAGTTCCAATCCCACTGAAACTAAATCAGATATACCAATTCTTGAAGCAAGATCACTTGATGATATCAACTTAGCTTTTAAGCAACTCCATGAAGGAGTAGATGTGGAGGATGTCATCCTTCCCAGTGCGATCAAAAGCCAGGTTGAAGAAGGAGCCAAAACTGAAACAAATTCAGATTTGGAAGTCGTTGAAGCAAAATCACTGGGAGATATTCATGTTGCCTTGATGCAATCCTCAGAGAAAAACTTGAATGAACTTCCAGAAAGTTCTGTGTCAAATGTTCCATCAGAGGGATTAGAACCAGCTGGAGTGGATTCTATCATTGAGACTGCTTCATCTAACGCGACCAATGCCGATAAAGCAGAAGCAAATACAGTTGATGAAAAATCTGTAGATCCAAACGTTTCTGCTTCCAAAAACAAAGACAAGAAGGAAAAGTCTGGAAAATCTTCTGGATCCAGCTCCAGCTCAAGCTCTAGCGATTCTGATTGAGATTGAAAAGTCTAAGAGGTAAAAGGAGTAGAATCATGTGGAGTTTCCTTTTGGGGTTTCCTCTTCAGTCTTCATTTCAAGATTTTTTTTTCAAAAATTTTCTTTTTGGGTTGGTTTTTCCAGTTTGGTTACCTTATTCTTTGTTTACAGTGCAATCTTTTGAAAAAATGAGTTGTGGTTGATTTCTTGTAATTGTGCAAGTTTCCAGGATCCCCATCCACCCCTTAAGAGTTTGAAGTTTGAGGGAGAAAGGTGGTTTTTTTTTCTTTTTCTACTGTGTTTTCTTTTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTGTTTAAATCTGTATGTAAAAATTTT ATGAAGGTTTGTTATTGGAATTGGAGGAAGTTGGGGATTTCAGCGTCAAAGAAGTTGGGGAACCAGTTCTTGAGAAAAAGGTACTCCCAGAGGAAGCTCAAGAAGAAAGATTTGAATTGGGTTCTAATTCCAATTCGACAGAAGCTAAATCAGATATACCAATTCTTGAAGCAAGAACACTGGCTGATATCAACTTGGCCTTTAGGCAACTCCAAGAAGGGGGTAGATGTGGAGGATGTCATTCTCCTCAGTGCGATTGAAAGCCAAGTTAATGAAGACGCCAAACCCGAAACAAGTTCAGATTTGGAGGTTGTGGAAGCGAGATCCCTGGGAGATATTCATGACGCAGTGTTGCATGCATTGGAGAGTAATATTGATGAACTAGGATCTAGTTCCAACAGCTCAGAAACCAAATCGGATATACCAATGCTTGAAGCAAAATCACTCGATGATATCAACTTTGCTTTTAGGCAACTCCACGATGGAGTTGACGTGGAGGACGTCATTGAAGTTAATAGCCAAGTTACCGTAAAAGCCAAGCCTGAAACAAGTTCGGATTTGGAAGTCGTTGAAGCAAGATCTTTGGGAGATATCCATGTTGCTTTGATGCAACTCTCGGAGAAAAACATAGATGAGTCAGGTTCTAGTTCCAATCCCACTGAAACTAAATCAGATATACCAATTCTTGAAGCAAGATCACTTGATGATATCAACTTAGCTTTTAAGCAACTCCATGAAGGAGTAGATGTGGAGGATGTCATCCTTCCCAGTGCGATCAAAAGCCAGGTTGAAGAAGGAGCCAAAACTGAAACAAATTCAGATTTGGAAGTCGTTGAAGCAAAATCACTGGGAGATATTCATGTTGCCTTGATGCAATCCTCAGAGAAAAACTTGAATGAACTTCCAGAAAGTTCTGTGTCAAATGTTCCATCAGAGGGATTAGAACCAGCTGGAGTGGATTCTATCATTGAGACTGCTTCATCTAACGCGACCAATGCCGATAAAGCAGAAGCAAATACAGTTGATGAAAAATCTGTAGATCCAAACGTTTCTGCTTCCAAAAACAAAGACAAGAAGGAAAAGTCTGGAAAATCTTCTGGATCCAGCTCCAGCTCAAGCTCTAGCGATTCTGATTGA MKVCYWNWRKLGISASKKLGNQFLRKRYSQRKLKKKDLNWVLIPIRQKLNQIYQFLKQEHWLISTWPLGNSKKGVDVEDVILLSAIESQVNEDAKPETSSDLEVVEARSLGDIHDAVLHALESNIDELGSSSNSSETKSDIPMLEAKSLDDINFAFRQLHDGVDVEDVIEVNSQVTVKAKPETSSDLEVVEARSLGDIHVALMQLSEKNIDESGSSSNPTETKSDIPILEARSLDDINLAFKQLHEGVDVEDVILPSAIKSQVEEGAKTETNSDLEVVEAKSLGDIHVALMQSSEKNLNELPESSVSNVPSEGLEPAGVDSIIETASSNATNADKAEANTVDEKSVDPNVSASKNKDKKEKSGKSSGSSSSSSSSDSD Homology
BLAST of Cucsat.G9006.T6 vs. NCBI nr
Match: XP_004144685.2 (uncharacterized protein LOC101208481 [Cucumis sativus] >KGN54910.1 hypothetical protein Csa_012322 [Cucumis sativus]) HSP 1 Score: 542 bits (1396), Expect = 2.36e-176 Identity = 305/307 (99.35%), Postives = 307/307 (100.00%), Query Frame = 0
BLAST of Cucsat.G9006.T6 vs. NCBI nr
Match: XP_008442050.1 (PREDICTED: uncharacterized protein LOC103486029 [Cucumis melo] >KAA0041851.1 uncharacterized protein E6C27_scaffold67G002330 [Cucumis melo var. makuwa] >TYK05374.1 uncharacterized protein E5676_scaffold83G00450 [Cucumis melo var. makuwa]) HSP 1 Score: 474 bits (1219), Expect = 2.08e-150 Identity = 280/333 (84.08%), Postives = 292/333 (87.69%), Query Frame = 0
BLAST of Cucsat.G9006.T6 vs. NCBI nr
Match: XP_038883254.1 (uncharacterized protein LOC120074258 isoform X1 [Benincasa hispida]) HSP 1 Score: 441 bits (1135), Expect = 1.97e-138 Identity = 262/310 (84.52%), Postives = 278/310 (89.68%), Query Frame = 0
BLAST of Cucsat.G9006.T6 vs. NCBI nr
Match: XP_023543431.1 (uncharacterized protein LOC111803319 [Cucurbita pepo subsp. pepo] >XP_023543432.1 uncharacterized protein LOC111803319 [Cucurbita pepo subsp. pepo] >XP_023543433.1 uncharacterized protein LOC111803319 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 389 bits (999), Expect = 9.29e-119 Identity = 239/311 (76.85%), Postives = 260/311 (83.60%), Query Frame = 0
BLAST of Cucsat.G9006.T6 vs. NCBI nr
Match: XP_023543429.1 (uncharacterized protein LOC111803318 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 384 bits (986), Expect = 5.29e-117 Identity = 237/312 (75.96%), Postives = 265/312 (84.94%), Query Frame = 0
BLAST of Cucsat.G9006.T6 vs. ExPASy TrEMBL
Match: A0A0A0KYZ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G594440 PE=4 SV=1) HSP 1 Score: 542 bits (1396), Expect = 1.14e-176 Identity = 305/307 (99.35%), Postives = 307/307 (100.00%), Query Frame = 0
BLAST of Cucsat.G9006.T6 vs. ExPASy TrEMBL
Match: A0A5A7TJW0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00450 PE=4 SV=1) HSP 1 Score: 474 bits (1219), Expect = 1.01e-150 Identity = 280/333 (84.08%), Postives = 292/333 (87.69%), Query Frame = 0
BLAST of Cucsat.G9006.T6 vs. ExPASy TrEMBL
Match: A0A1S3B4T0 (uncharacterized protein LOC103486029 OS=Cucumis melo OX=3656 GN=LOC103486029 PE=4 SV=1) HSP 1 Score: 474 bits (1219), Expect = 1.01e-150 Identity = 280/333 (84.08%), Postives = 292/333 (87.69%), Query Frame = 0
BLAST of Cucsat.G9006.T6 vs. ExPASy TrEMBL
Match: A0A6J1GDK4 (uncharacterized protein LOC111453199 OS=Cucurbita moschata OX=3662 GN=LOC111453199 PE=4 SV=1) HSP 1 Score: 382 bits (982), Expect = 1.03e-116 Identity = 237/315 (75.24%), Postives = 258/315 (81.90%), Query Frame = 0
BLAST of Cucsat.G9006.T6 vs. ExPASy TrEMBL
Match: A0A6J1IP13 (uncharacterized protein LOC111478159 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478159 PE=4 SV=1) HSP 1 Score: 382 bits (982), Expect = 1.46e-116 Identity = 237/311 (76.21%), Postives = 255/311 (81.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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