Cp4.1LG06g05010 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTATTTATTGAATGTAAATTTTATCCTCCTTGAATTTGTGAGCATTACGTAAACTTGATTCATACTTGATGGCTGCACTCCTTGGCAAGCACATGTTCGTCTTCGTTCCATTTCCCACTCGACCCTGTTTCCCACGGCGGTGCTTCTTCAAGTTCGATTCGGCCCTATCCATCTCTCATCGAGCTTCTGTTTCAACCGTTCGAGCTACTTCGGCTGCCTCCATGGAAACTAGGACCGAGCTATCGGTTTGTATTATCTCTTATCTTCTCTTGCTTGCTCTGTAAATTGAATTGTGTAGAATGGAATCTGGATGATTAGGCTCCGGTTGAAGCTGTTTGTAATTTCCTCTGCTTGGTGTTTGAGAGAATCGCAAAAGATATGAGATGATATATGCTAAATGAAATGGCCGATGGTGTGTTGAGGCGTCGTATATATATGTTTTGTTGCGAAAAATCTAGGCGGATTTGAATTGGATTGAGTTATACTGAGAGTTTGAGTGATTCAACTACGTCAATTCTAAACTTCTTTCCGAAGATATAGCCCGGCGTAACGAAACATTATCAGGAACCTCTTCAGGGTTTGAGATCATTGTTTTCAGGTAGTGAGAGAGGAAATGTAGTTTGAAGTTGGTTCTAGGTCTATTTGATTACATGTTCATTAATTCCTCATGAAAGAAGGATGTTAAAGAATACGTTGGTAAGATTAAATTAGTCAAATGTGTGTCACGTAAGAGTGACAAGCATTTATTGGGAAAATAAAAGTTGACCTAACCTGTCAACTTTACCTTTTCGAATAGCAATGTTCTTTTTTCCTAGCTCTAATGATCTTCTGGTTTTTGCGTAGGACCCTGTTTTGATTGATAAGGAAGTCAACAACATTGAGAATATTTTAGCTTGTTCCGTATGTTATGGCCCATTGACTGCGGCAGCTGGTTCGGGACTTTCAGTGTATGTTTGAAACTGTTTTGTACCTATTTTAGCTTTTCTTATTTCTTCTATTGCGTCTTAGTAATTGATGTGTCTTTATTTATATGCTTTTGATACAGGGAGTCCACAAAGGGATATCAATTGGAATGCGGCACATGTAAAAAGTCATTCACTGGCAGTGAATCTCACTTGGACTTGACGATATCCGCTGGAATTAACAATGAAGAATCCATGCCTGCTACCACAGAGATTTTTCGGTATTTCAATGTTGTCATCTGCTTTGTATTATGAAGGGGCAGTTAATTAGCATGCTACTAAAATTTTCAAATGCAAAAGGCTTCATGGTCTTGAGAGAAATTAATTTTGTTACAAATTCCATGTGATGGATCTTTATGCTTCATGTTAAAAGGCATTTTTGTTTAGAGCTAGAAGCTCGGTAAGCCATATACACGGGGACACCATTGCTACAATAAAAATTGACGGAATCCAATATACATGGGGACATATTGGTGTACCTATCAGAGGTTTATGGAGGTCTGGGATATTTTCAGAAATATTTTTGCTTTTTGCCATGTTCGAATTAGGATTATATTGGTAGCTAGCTAGTCTTAGTTGTATTAATACAAATGAAGTTATGGGTGTTTGGTTGGAACTTGTGATACCTCTCCCTCGTTGCCTCCTTCCCCTTTTTTCTCATCTCATGTTTATCATCTTTTCACTGGATCAGGACTAGATTGGTGTCTTTTCTGTATGAGAGGGGCTGGCGTCAAAGTTTTTCAGCAATCCTTGGATTTCCAGGCCCAGAAAAGGAGGTGATGTCAGCTCTTTTATCTGTCATGTTATTAAACTGCCTACATGGTACTTTTTATGTAATATCAGCATGTAAGTATAGGCTCAACATTAGGAATTGGATTAGTCCATTAATACCAATGCAAAGTCAGAGGCAGGTCTAGTATTTTGTTTTAGAGTGTTTTATTACTGATGAAGAGGAGGCCCTAGTGCCAACCCCTATAACAATGTTGAGGTTCGCAAAGATTAGTGATTTTAACGTGTCTCTGTTTTCACGCCTACTAGACTAGTGGTATCAGTTCAAGATGTAACCATGTTCCCAATACTAAGGACATGTTGATTTCATTGCAGTTCGAGTTTATAAAAAATTTCATCACACCAGTCTTAGGTGGAAACATAATTGATGCAAGTTGTGGAAGCGGAATGTTTTCAAGAATCTTTGCCAAGAGTGGGTTATTTTCTTCTGTTGTTGCATTGGACTACTCGGAGAACATGTTAAAGGAGTGTTATGCATTCATCAAAGAAGAGGAAAACTTCCCCAAAGAGTAAACAATATTTTCCTTTAGTTTTAGCTTTACATTAGTAGTTGTGGAATTGCTATAGTTCAAGGATCTTTGTGTTGCATATTTAGATTGTTGTTCGAGTTTTTTATCTAAATGAAAATTGTCATTCTTAGGAGCTTGGTTCTGATTAGAGCTGATATTGCTCGGCTTCCATTTGCTTCAAGTTCTATTGATGCAGTGCATGCTGGTGCTGCTTTACACTGCTGGCCTTCACCATCAGCTGCTGTGAGTATTTTTCATCTGTATCTGGGGGTTATAGGTTGTGATTTGACTTTTCATAGTTGCACTAATGAAAAACACACTGCACAAGCTGCAGTTTATTGATGGTTATTGCCTTTTTACTATAGTGATATGATTACTCATCTTCAAAGAAAATATATTTTAGTACTCTTTACTTCGCTTGTATGAGTGTTAAATGTGTATATTACTGGCACCAACATATACCTATAATTGTACCACAGATTCATCTCACTCAACTAATCAACGGATATGCTTTTGTGATTAACTGTGTCCAGAATGGTCTTGCAGGTGGCTGAAATAAGTAGAATTTTAAAACCCGGAGGAGTATTTGTTGGGAGCACTTACATAATCGATGGACCATTTTCTTTTATGCCATTTTTGGGGACTCAAATAGAGGTATATTCGCAATTTGTTTTAATTTTCCCTTCTACAACTTCTGGGATTCTCCTTGGATGCTTAGGTAGTTTGATTACTTCAGTTCATTATATATCTTTACTTTTCACTCTTTGCTTTGAAATACTTTGATGTTATTGTGAGTGAGAATATTTGCTAAAACCACCCCATCTAAACATCTAAACAGTGTGAAAGTTCTCTGTTTATAATTATTTAGAAAATCAAATAAATTACAAAAGATACCCGGAAGAGCAATAAATAGATACAAGAAAGACAAATATCTAAATATTTACCTATAATAAAATATCAAATATTCTATTATAACTAATATCCTTTTAACATAAAGTGTCAGCAAAAGCAAAAACAATCACATTAACTTAGGTTGTTAACCATTTCTTAATGCTCCAACGTTGCATCCATATCGGTTACCAGAATTCTGGTTTTTTGTTACGGTTTTTGCCTCTTACCGTAGTAGTTAATCCTTAAACTTTGTATTGTGCATCTCTCTGTGCACAGATTGCAAAGAAGATAATAGGGGGCCACATCGTTCTATCTGAAAGTGAATTAGAAGAACTCTGCATGGCCTGTGGTATGGTCGACTTTAGATGTTTAAGAAATAGGAGGTTTGTAATGTTCTCTGCTAGAAAACGCAGCTGAACATTTGGTTTGTGGTTTCCAGTCCTCTGGTTTTATTATAGTATATATATGTATATATATTTTTTTTCTTTTTTAGCATTCAGAACTTCTCAAAAGTTGATGTTTTATGTATGTTGGCTGCTGGTTGTCCTACATCTGGTTGTAATATAATTTATCCATATTTGCTTTATACCTT CTATTTATTGAATGTAAATTTTATCCTCCTTGAATTTGTGAGCATTACGTAAACTTGATTCATACTTGATGGCTGCACTCCTTGGCAAGCACATGTTCGTCTTCGTTCCATTTCCCACTCGACCCTGTTTCCCACGGCGGTGCTTCTTCAAGTTCGATTCGGCCCTATCCATCTCTCATCGAGCTTCTGTTTCAACCGTTCGAGCTACTTCGGCTGCCTCCATGGAAACTAGGACCGAGCTATCGGACCCTGTTTTGATTGATAAGGAAGTCAACAACATTGAGAATATTTTAGCTTGTTCCGTATGTTATGGCCCATTGACTGCGGCAGCTGGTTCGGGACTTTCAGTGGAGTCCACAAAGGGATATCAATTGGAATGCGGCACATGTAAAAAGTCATTCACTGGCAGTGAATCTCACTTGGACTTGACGATATCCGCTGGAATTAACAATGAAGAATCCATGCCTGCTACCACAGAGATTTTTCGGACTAGATTGGTGTCTTTTCTGTATGAGAGGGGCTGGCGTCAAAGTTTTTCAGCAATCCTTGGATTTCCAGGCCCAGAAAAGGAGTTCGAGTTTATAAAAAATTTCATCACACCAGTCTTAGGTGGAAACATAATTGATGCAAGTTGTGGAAGCGGAATGTTTTCAAGAATCTTTGCCAAGAGTGGGTTATTTTCTTCTGTTGTTGCATTGGACTACTCGGAGAACATGTTAAAGGAGTGTTATGCATTCATCAAAGAAGAGGAAAACTTCCCCAAAGAGAGCTTGGTTCTGATTAGAGCTGATATTGCTCGGCTTCCATTTGCTTCAAGTTCTATTGATGCAGTGCATGCTGGTGCTGCTTTACACTGCTGGCCTTCACCATCAGCTGCTGTGGCTGAAATAAGTAGAATTTTAAAACCCGGAGGAGTATTTGTTGGGAGCACTTACATAATCGATGGACCATTTTCTTTTATGCCATTTTTGGGGACTCAAATAGAGATTGCAAAGAAGATAATAGGGGGCCACATCGTTCTATCTGAAAGTGAATTAGAAGAACTCTGCATGGCCTGTGGTATGGTCGACTTTAGATGTTTAAGAAATAGGAGGTTTGTAATGTTCTCTGCTAGAAAACGCAGCTGAACATTTGGTTTGTGGTTTCCAGTCCTCTGGTTTTATTATAGTATATATATGTATATATATTTTTTTTCTTTTTTAGCATTCAGAACTTCTCAAAAGTTGATGTTTTATGTATGTTGGCTGCTGGTTGTCCTACATCTGGTTGTAATATAATTTATCCATATTTGCTTTATACCTT ATGGCTGCACTCCTTGGCAAGCACATGTTCGTCTTCGTTCCATTTCCCACTCGACCCTGTTTCCCACGGCGGTGCTTCTTCAAGTTCGATTCGGCCCTATCCATCTCTCATCGAGCTTCTGTTTCAACCGTTCGAGCTACTTCGGCTGCCTCCATGGAAACTAGGACCGAGCTATCGGACCCTGTTTTGATTGATAAGGAAGTCAACAACATTGAGAATATTTTAGCTTGTTCCGTATGTTATGGCCCATTGACTGCGGCAGCTGGTTCGGGACTTTCAGTGGAGTCCACAAAGGGATATCAATTGGAATGCGGCACATGTAAAAAGTCATTCACTGGCAGTGAATCTCACTTGGACTTGACGATATCCGCTGGAATTAACAATGAAGAATCCATGCCTGCTACCACAGAGATTTTTCGGACTAGATTGGTGTCTTTTCTGTATGAGAGGGGCTGGCGTCAAAGTTTTTCAGCAATCCTTGGATTTCCAGGCCCAGAAAAGGAGTTCGAGTTTATAAAAAATTTCATCACACCAGTCTTAGGTGGAAACATAATTGATGCAAGTTGTGGAAGCGGAATGTTTTCAAGAATCTTTGCCAAGAGTGGGTTATTTTCTTCTGTTGTTGCATTGGACTACTCGGAGAACATGTTAAAGGAGTGTTATGCATTCATCAAAGAAGAGGAAAACTTCCCCAAAGAGAGCTTGGTTCTGATTAGAGCTGATATTGCTCGGCTTCCATTTGCTTCAAGTTCTATTGATGCAGTGCATGCTGGTGCTGCTTTACACTGCTGGCCTTCACCATCAGCTGCTGTGGCTGAAATAAGTAGAATTTTAAAACCCGGAGGAGTATTTGTTGGGAGCACTTACATAATCGATGGACCATTTTCTTTTATGCCATTTTTGGGGACTCAAATAGAGATTGCAAAGAAGATAATAGGGGGCCACATCGTTCTATCTGAAAGTGAATTAGAAGAACTCTGCATGGCCTGTGGTATGGTCGACTTTAGATGTTTAAGAAATAGGAGGTTTGTAATGTTCTCTGCTAGAAAACGCAGCTGA MAALLGKHMFVFVPFPTRPCFPRRCFFKFDSALSISHRASVSTVRATSAASMETRTELSDPVLIDKEVNNIENILACSVCYGPLTAAAGSGLSVESTKGYQLECGTCKKSFTGSESHLDLTISAGINNEESMPATTEIFRTRLVSFLYERGWRQSFSAILGFPGPEKEFEFIKNFITPVLGGNIIDASCGSGMFSRIFAKSGLFSSVVALDYSENMLKECYAFIKEEENFPKESLVLIRADIARLPFASSSIDAVHAGAALHCWPSPSAAVAEISRILKPGGVFVGSTYIIDGPFSFMPFLGTQIEIAKKIIGGHIVLSESELEELCMACGMVDFRCLRNRRFVMFSARKRS Homology
BLAST of Cp4.1LG06g05010 vs. ExPASy Swiss-Prot
Match: Q8LBV4 (Uncharacterized methyltransferase At1g78140, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g78140 PE=1 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 2.3e-97 Identity = 183/318 (57.55%), Postives = 237/318 (74.53%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. ExPASy Swiss-Prot
Match: Q0WPT7 (Uncharacterized methyltransferase At2g41040, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g41040 PE=1 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 4.2e-70 Identity = 144/345 (41.74%), Postives = 215/345 (62.32%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. ExPASy Swiss-Prot
Match: Q2YY85 (Demethylmenaquinone methyltransferase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) OX=273036 GN=menG PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 7.7e-08 Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. ExPASy Swiss-Prot
Match: A7X2H6 (Demethylmenaquinone methyltransferase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) OX=418127 GN=menG PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.0e-07 Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. ExPASy Swiss-Prot
Match: A6U1T9 (Demethylmenaquinone methyltransferase OS=Staphylococcus aureus (strain JH1) OX=359787 GN=menG PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.0e-07 Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. NCBI nr
Match: XP_023535731.1 (uncharacterized methyltransferase At1g78140, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 697 bits (1800), Expect = 3.36e-253 Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. NCBI nr
Match: XP_022937076.1 (uncharacterized methyltransferase At1g78140, chloroplastic [Cucurbita moschata]) HSP 1 Score: 688 bits (1776), Expect = 1.53e-249 Identity = 347/352 (98.58%), Postives = 348/352 (98.86%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. NCBI nr
Match: XP_022976042.1 (uncharacterized methyltransferase At1g78140, chloroplastic-like [Cucurbita maxima] >XP_022976043.1 uncharacterized methyltransferase At1g78140, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 687 bits (1774), Expect = 3.09e-249 Identity = 347/352 (98.58%), Postives = 348/352 (98.86%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. NCBI nr
Match: KAG7024628.1 (putative methyltransferase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 687 bits (1772), Expect = 6.23e-249 Identity = 345/352 (98.01%), Postives = 347/352 (98.58%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. NCBI nr
Match: KAG6591745.1 (putative methyltransferase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 667 bits (1721), Expect = 2.74e-241 Identity = 336/344 (97.67%), Postives = 338/344 (98.26%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. ExPASy TrEMBL
Match: A0A6J1F9C0 (uncharacterized methyltransferase At1g78140, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443486 PE=4 SV=1) HSP 1 Score: 688 bits (1776), Expect = 7.41e-250 Identity = 347/352 (98.58%), Postives = 348/352 (98.86%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. ExPASy TrEMBL
Match: A0A6J1IKY5 (uncharacterized methyltransferase At1g78140, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111476562 PE=4 SV=1) HSP 1 Score: 687 bits (1774), Expect = 1.50e-249 Identity = 347/352 (98.58%), Postives = 348/352 (98.86%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. ExPASy TrEMBL
Match: A0A1S3CQA4 (uncharacterized methyltransferase At1g78140, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503586 PE=4 SV=1) HSP 1 Score: 536 bits (1380), Expect = 1.81e-189 Identity = 274/355 (77.18%), Postives = 302/355 (85.07%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. ExPASy TrEMBL
Match: A0A6J1D0A7 (uncharacterized methyltransferase At1g78140, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016077 PE=4 SV=1) HSP 1 Score: 531 bits (1369), Expect = 8.27e-188 Identity = 277/357 (77.59%), Postives = 310/357 (86.83%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. ExPASy TrEMBL
Match: A0A5C7H8M2 (Methyltransf_11 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_021984 PE=4 SV=1) HSP 1 Score: 411 bits (1057), Expect = 1.77e-140 Identity = 203/329 (61.70%), Postives = 258/329 (78.42%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. TAIR 10
Match: AT1G78140.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 357.1 bits (915), Expect = 1.7e-98 Identity = 183/318 (57.55%), Postives = 237/318 (74.53%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. TAIR 10
Match: AT2G41040.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 266.5 bits (680), Expect = 2.9e-71 Identity = 144/345 (41.74%), Postives = 215/345 (62.32%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. TAIR 10
Match: AT1G20330.1 (sterol methyltransferase 2 ) HSP 1 Score: 49.7 bits (117), Expect = 5.7e-06 Identity = 46/176 (26.14%), Postives = 74/176 (42.05%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. TAIR 10
Match: AT5G13710.1 (sterol methyltransferase 1 ) HSP 1 Score: 48.5 bits (114), Expect = 1.3e-05 Identity = 52/193 (26.94%), Postives = 78/193 (40.41%), Query Frame = 0
BLAST of Cp4.1LG06g05010 vs. TAIR 10
Match: AT5G13710.2 (sterol methyltransferase 1 ) HSP 1 Score: 48.5 bits (114), Expect = 1.3e-05 Identity = 52/193 (26.94%), Postives = 78/193 (40.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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