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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAACCTGGGATGTGGGGGGAGGGGACCACCACATGATGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTCCTCCTGCAGGCCCAAAGGGCCGCCTTTGGCCCACATCTAAGTGGACCCGGGCCCACCTCCCCCACCTCCATCACATGACACACTTCGACCTTCAATACTGGTCCCTACGCCCGTCTTTTGCGGTCCACGGAGCACCACAAAGCTCCTTTCCACCACTCACCTGGACCCCACTGCTGCTTCTTCGCCCTTCATCTCCTTCATCTCCTTCATCTCCTTCATCTCCTTCCTCTTCCCATCTTTCTTTTCCAAATGTTTAA mRNA sequence ATGAACCTGGGATGTGGGGGGAGGGGACCACCACATGATGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTCCTCCTGCAGGCCCAAAGGGCCGCCTTTGGCCCACATCTAAGTGGACCCGGGCCCACCTCCCCCACCTCCATCACATGACACACTTCGACCTTCAATACTGGTCCCTACGCCCGTCTTTTGCGGTCCACGGAGCACCACAAAGCTCCTTTCCACCACTCACCTGGACCCCACTGCTGCTTCTTCGCCCTTCATCTCCTTCATCTCCTTCATCTCCTTCATCTCCTTCCTCTTCCCATCTTTCTTTTCCAAATGTTTAA Coding sequence (CDS) ATGAACCTGGGATGTGGGGGGAGGGGACCACCACATGATGCTGCTGCTGCTGCTGCTGCTGTTGCTGCTCCTCCTGCAGGCCCAAAGGGCCGCCTTTGGCCCACATCTAAGTGGACCCGGGCCCACCTCCCCCACCTCCATCACATGACACACTTCGACCTTCAATACTGGTCCCTACGCCCGTCTTTTGCGGTCCACGGAGCACCACAAAGCTCCTTTCCACCACTCACCTGGACCCCACTGCTGCTTCTTCGCCCTTCATCTCCTTCATCTCCTTCATCTCCTTCATCTCCTTCCTCTTCCCATCTTTCTTTTCCAAATGTTTAA Protein sequence MNLGCGGRGPPHDAAAAAAAVAAPPAGPKGRLWPTSKWTRAHLPHLHHMTHFDLQYWSLRPSFAVHGAPQSSFPPLTWTPLLLLRPSSPSSPSSPSSPSSSHLSFPNV*
Homology
BLAST of CsGy6G005585 vs. NCBI nr
Match: KAE8646693.1 (hypothetical protein Csa_005030 [Cucumis sativus]) HSP 1 Score: 219 bits (559), Expect = 4.46e-72 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
Query: 1 MNLGCGGRGPPHDAAAAAAAVAAPPAGPKGRLWPTSKWTRAHLPHLHHMTHFDLQYWSLR 60
MNLGCGGRGPPHDAAAAAAAVAAPPAGPKGRLWPTSKWTRAHLPHLHHMTHFDLQYWSLR
Sbjct: 1 MNLGCGGRGPPHDAAAAAAAVAAPPAGPKGRLWPTSKWTRAHLPHLHHMTHFDLQYWSLR 60
Query: 61 PSFAVHGAPQSSFPPLTWTPLLLLRPSSPSSPSSPSSPSSSHLSFPNV 108
PSFAVHGAPQSSFPPLTWTPLLLLRPSSPSSPSSPSSPSSSHLSFPNV
Sbjct: 61 PSFAVHGAPQSSFPPLTWTPLLLLRPSSPSSPSSPSSPSSSHLSFPNV 108
BLAST of CsGy6G005585 vs. ExPASy TrEMBL
Match: A0A0A0K9Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G075185 PE=4 SV=1) HSP 1 Score: 202 bits (513), Expect = 1.86e-65 Identity = 101/108 (93.52%), Postives = 101/108 (93.52%), Query Frame = 0
Query: 1 MNLGCGGRGPPHDAAAAAAAVAAPPAGPKGRLWPTSKWTRAHLPHLHHMTHFDLQYWSLR 60
MNLGCGGRGPPHDAAAAAAAVAAPPAGPKGRLWPTSKWTRAHLPHLHHMTHFDLQYWSLR
Sbjct: 1 MNLGCGGRGPPHDAAAAAAAVAAPPAGPKGRLWPTSKWTRAHLPHLHHMTHFDLQYWSLR 60
Query: 61 PSFAVHGAPQSSFPPLTWTPLLLLRPSSPSSPSSPSSPSSSHLSFPNV 108
PSFAVHGAPQSSFPPLTWTPLLLL PSSPSSPSSSHLSFPNV
Sbjct: 61 PSFAVHGAPQSSFPPLTWTPLLLLP------PSSPSSPSSSHLSFPNV 102
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| KAE8646693.1 | 4.46e-72 | 100.00 | hypothetical protein Csa_005030 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K9Q2 | 1.86e-65 | 93.52 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G075185 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 84..108 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..30 |
Relationships
The following mRNA feature(s) are a part of this gene:
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