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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAGACAAGGACAGAAACACAGTTTGGAGAGGATCAGGGCGCCGTTAGTCTGAAGATTGAGAGGTTCGCCGTTGATGGAGTTGGAAATGAAGAGGGTTCGCTGTCAATCAGAAGATGGAGAGGTTCGCTGTCGATTAAAAGATGAAGAGGTAGGATGGAGGTTGTCGTCGATGGAGGTTCATCGTCGTCGGTCACCGAACGTTGGAGGTGGAGATAGCCAAAAGCCACTTGACTTACCGAGGCGTTAG mRNA sequence ATGAAGACAAGGACAGAAACACAGTTTGGAGAGGATCAGGGCGCCGTTAGTCTGAAGATTGAGAGGTTCGCCGTTGATGGAGTTGGAAATGAAGAGGATGAAGAGGTAGGATGGAGGTTGTCGTCGATGGAGGTTCATCGTCGTCGGTCACCGAACGTTGGAGGTGGAGATAGCCAAAAGCCACTTGACTTACCGAGGCGTTAG Coding sequence (CDS) ATGAAGACAAGGACAGAAACACAGTTTGGAGAGGATCAGGGCGCCGTTAGTCTGAAGATTGAGAGGTTCGCCGTTGATGGAGTTGGAAATGAAGAGGATGAAGAGGTAGGATGGAGGTTGTCGTCGATGGAGGTTCATCGTCGTCGGTCACCGAACGTTGGAGGTGGAGATAGCCAAAAGCCACTTGACTTACCGAGGCGTTAG Protein sequence MKTRTETQFGEDQGAVSLKIERFAVDGVGNEEDEEVGWRLSSMEVHRRRSPNVGGGDSQKPLDLPRR*
Homology
BLAST of CsGy5G013365 vs. NCBI nr
Match: KGN50895.1 (hypothetical protein Csa_023103 [Cucumis sativus]) HSP 1 Score: 139 bits (351), Expect = 1.29e-41 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
Query: 1 MKTRTETQFGEDQGAVSLKIERFAVDGVGNEEDEEVGWRLSSMEVHRRRSPNVGGGDSQK 60
MKTRTETQFGEDQGAVSLKIERFAVDGVGNEEDEEVGWRLSSMEVHRRRSPNVGGGDSQK
Sbjct: 1 MKTRTETQFGEDQGAVSLKIERFAVDGVGNEEDEEVGWRLSSMEVHRRRSPNVGGGDSQK 60
Query: 61 PLDLPRR 67
PLDLPRR
Sbjct: 61 PLDLPRR 67
BLAST of CsGy5G013365 vs. ExPASy TrEMBL
Match: A0A0A0KMM2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315890 PE=4 SV=1) HSP 1 Score: 139 bits (351), Expect = 6.22e-42 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
Query: 1 MKTRTETQFGEDQGAVSLKIERFAVDGVGNEEDEEVGWRLSSMEVHRRRSPNVGGGDSQK 60
MKTRTETQFGEDQGAVSLKIERFAVDGVGNEEDEEVGWRLSSMEVHRRRSPNVGGGDSQK
Sbjct: 1 MKTRTETQFGEDQGAVSLKIERFAVDGVGNEEDEEVGWRLSSMEVHRRRSPNVGGGDSQK 60
Query: 61 PLDLPRR 67
PLDLPRR
Sbjct: 61 PLDLPRR 67
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| KGN50895.1 | 1.29e-41 | 100.00 | hypothetical protein Csa_023103 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KMM2 | 6.22e-42 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G315890 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 31..53 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 31..67 |
Relationships
The following mRNA feature(s) are a part of this gene:
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