CsGy5G016745 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G016745
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr5: 23075987 .. 23076477 (-)
RNA-Seq Expression	CsGy5G016745
Synteny	CsGy5G016745

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTCTTCCCCTTTCGAGAGTTGTCGCTTGCGCATGCTGCACAGTGCGCAGTGAGAAAACTTTTCAATAGGGCTTCTCTCTCTCAGCTTCCGATCGTCCGTCGCTCCCCTGCTCCCCTCCCGTCCGCCTGCGTTCGACGCTGCTGTCTTTCAGTCTCTCGCCTCCGTCGGCCGCTCCTTCTCCTTCGCAAAAGTCCGCTGTTGCTCTTCTTTTTTTTTCTTCCAATCCTTTTCTCCCTTCTCCTCGGGTACTTTCTCTCTTCTCTTCTCCGGATTTCAGTGGATTTTGGGATGTGGGTCATGCTTGGATTTCAATTTTAGTTTTGGGTTGGTTTGATTGTGTAATTTCTGAAGTGGTGTATGCTTGGAAAGTTGGTTTTGAAATATTATTGTTTCACCGAACATATCATCGGAACCTTATTGCCTATAGATCAGGAACTCATCTTAACAAATTGGCTCCAAGCTGCCGTTCCAAGTTCAAACTCTAG

mRNA sequence

ATGGTTTTCTTCCCCTTTCGAGAGTTGTCGCTTGCGCATGCTGCACAGTGCGCAGTGAGAAAACTTTTCAATAGGGCTTCTCTCTCTCAGCTTCCGATCGTCCGTCGCTCCCCTGCTCCCCTCCCGTCCGCCTGCGTTCGACGCTGCTGTCTTTCAGTCTCTCGCCTCCGTCGGCCGCTCCTTCTCCTTCGCAAAAGTCCGCTTGGATTTTGGGATGTGGGTCATGCTTGGATTTCAATTTTAGTTTTGGGTTGGTTTGATTGTGTAATTTCTGAAGTGGTGTATGCTTGGAAAGTTGGTTTTGAAATATTATTGTTTCACCGAACATATCATCGGAACCTTATTGCCTATAGATCAGGAACTCATCTTAACAAATTGGCTCCAAGCTGCCGTTCCAAGTTCAAACTCTAG

Coding sequence (CDS)

ATGGTTTTCTTCCCCTTTCGAGAGTTGTCGCTTGCGCATGCTGCACAGTGCGCAGTGAGAAAACTTTTCAATAGGGCTTCTCTCTCTCAGCTTCCGATCGTCCGTCGCTCCCCTGCTCCCCTCCCGTCCGCCTGCGTTCGACGCTGCTGTCTTTCAGTCTCTCGCCTCCGTCGGCCGCTCCTTCTCCTTCGCAAAAGTCCGCTTGGATTTTGGGATGTGGGTCATGCTTGGATTTCAATTTTAGTTTTGGGTTGGTTTGATTGTGTAATTTCTGAAGTGGTGTATGCTTGGAAAGTTGGTTTTGAAATATTATTGTTTCACCGAACATATCATCGGAACCTTATTGCCTATAGATCAGGAACTCATCTTAACAAATTGGCTCCAAGCTGCCGTTCCAAGTTCAAACTCTAG

Protein sequence

MVFFPFRELSLAHAAQCAVRKLFNRASLSQLPIVRRSPAPLPSACVRRCCLSVSRLRRPLLLLRKSPLGFWDVGHAWISILVLGWFDCVISEVVYAWKVGFEILLFHRTYHRNLIAYRSGTHLNKLAPSCRSKFKL*

Homology

[Close]

BLAST of CsGy5G016745 vs. NCBI nr
Match: KGN51239.1 (hypothetical protein Csa_008655 [Cucumis sativus])

HSP 1 Score: 281 bits (719), Expect = 1.40e-95
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MVFFPFRELSLAHAAQCAVRKLFNRASLSQLPIVRRSPAPLPSACVRRCCLSVSRLRRPL 60
           MVFFPFRELSLAHAAQCAVRKLFNRASLSQLPIVRRSPAPLPSACVRRCCLSVSRLRRPL
Sbjct: 1   MVFFPFRELSLAHAAQCAVRKLFNRASLSQLPIVRRSPAPLPSACVRRCCLSVSRLRRPL 60

Query: 61  LLLRKSPLGFWDVGHAWISILVLGWFDCVISEVVYAWKVGFEILLFHRTYHRNLIAYRSG 120
           LLLRKSPLGFWDVGHAWISILVLGWFDCVISEVVYAWKVGFEILLFHRTYHRNLIAYRSG
Sbjct: 61  LLLRKSPLGFWDVGHAWISILVLGWFDCVISEVVYAWKVGFEILLFHRTYHRNLIAYRSG 120

Query: 121 THLNKLAPSCRSKFKL 136
           THLNKLAPSCRSKFKL
Sbjct: 121 THLNKLAPSCRSKFKL 136

[Close]

BLAST of CsGy5G016745 vs. ExPASy TrEMBL
Match: A0A0A0KQR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G497030 PE=4 SV=1)

HSP 1 Score: 281 bits (719), Expect = 6.76e-96
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MVFFPFRELSLAHAAQCAVRKLFNRASLSQLPIVRRSPAPLPSACVRRCCLSVSRLRRPL 60
           MVFFPFRELSLAHAAQCAVRKLFNRASLSQLPIVRRSPAPLPSACVRRCCLSVSRLRRPL
Sbjct: 1   MVFFPFRELSLAHAAQCAVRKLFNRASLSQLPIVRRSPAPLPSACVRRCCLSVSRLRRPL 60

Query: 61  LLLRKSPLGFWDVGHAWISILVLGWFDCVISEVVYAWKVGFEILLFHRTYHRNLIAYRSG 120
           LLLRKSPLGFWDVGHAWISILVLGWFDCVISEVVYAWKVGFEILLFHRTYHRNLIAYRSG
Sbjct: 61  LLLRKSPLGFWDVGHAWISILVLGWFDCVISEVVYAWKVGFEILLFHRTYHRNLIAYRSG 120

Query: 121 THLNKLAPSCRSKFKL 136
           THLNKLAPSCRSKFKL
Sbjct: 121 THLNKLAPSCRSKFKL 136

The following BLAST results are available for this feature:

BLAST of CsGy5G016745 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G016745 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51239.1	1.40e-95	100.00	hypothetical protein Csa_008655 [Cucumis sativus]	[more]

BLAST of CsGy5G016745 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQR1	6.76e-96	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G497030 PE=4 SV=1	[more]

BLAST of CsGy5G016745 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G016745.1	CsGy5G016745.1	mRNA