CsGy3G007680 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G007680
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 6599021 .. 6599407 (+)
RNA-Seq ExpressionCsGy3G007680
SyntenyCsGy3G007680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAAGGGGGCAGTAGCCAGGTGGGTGCAGTGGCACATAATGTCATCAAAGGCAATAAATCAATCAAACTCTACCCCAGATACAAGCTACGCCAATTACTGATGCCTGCCAACAAATGCCAATCCTTTTTTTTTTTTGTTTATATTTATATTCCTTTAATTGACAAAACCAACTTGGATAAGCCACGCGTGACGATATACTCAATGCGATTCCCTTATTTTACTACCAAAATCTCCCCCTCACAGTCTCTTTCTCTCTCTCTGAAAATCTCTCTCCAGTATCTTCAATCACAGCATGGGTTTTTTCCCTTAAATCTAGCAGAGCTAATTGGAGTTTCTTCCAATGAATCATTTGTGAGATTCTTCTTCTTCCTGTTCTTTTGA

mRNA sequence

ATGAAGAAAGGGGGCAGTAGCCAGGTGGGTGCAGTGGCACATAATGTCATCAAAGGCAATAAATCAATCAAACTCTACCCCAGATACAAGCTACGCCAATTACTGATGCCTGCCAACAAATGCCAATCCTTTTTTTTTTTTGTTTATATTTATATTCCTTTAATTGACAAAACCAACTTGGATAAGCCACGCGTGACGATATACTCAATGCGATTCCCTTATTTTACTACCAAAATCTCCCCCTCACAGTCTCTTTCTCTCTCTCTGAAAATCTCTCTCCAGTATCTTCAATCACAGCATGGGTTTTTTCCCTTAAATCTAGCAGAGCTAATTGGAGTTTCTTCCAATGAATCATTTGTGAGATTCTTCTTCTTCCTGTTCTTTTGA

Coding sequence (CDS)

ATGAAGAAAGGGGGCAGTAGCCAGGTGGGTGCAGTGGCACATAATGTCATCAAAGGCAATAAATCAATCAAACTCTACCCCAGATACAAGCTACGCCAATTACTGATGCCTGCCAACAAATGCCAATCCTTTTTTTTTTTTGTTTATATTTATATTCCTTTAATTGACAAAACCAACTTGGATAAGCCACGCGTGACGATATACTCAATGCGATTCCCTTATTTTACTACCAAAATCTCCCCCTCACAGTCTCTTTCTCTCTCTCTGAAAATCTCTCTCCAGTATCTTCAATCACAGCATGGGTTTTTTCCCTTAAATCTAGCAGAGCTAATTGGAGTTTCTTCCAATGAATCATTTGTGAGATTCTTCTTCTTCCTGTTCTTTTGA

Protein sequence

MKKGGSSQVGAVAHNVIKGNKSIKLYPRYKLRQLLMPANKCQSFFFFVYIYIPLIDKTNLDKPRVTIYSMRFPYFTTKISPSQSLSLSLKISLQYLQSQHGFFPLNLAELIGVSSNESFVRFFFFLFF*
Homology
[Close]
BLAST of CsGy3G007680 vs. NCBI nr
Match: KGN56385.1 (hypothetical protein Csa_010852 [Cucumis sativus])

HSP 1 Score: 241 bits (616), Expect = 4.08e-80
Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0 

Query: 1   MKKGGSSQVGAVAHNVIKGNKSIKLYPRYKLRQLLMPANKCQSFFFF-VYIYIPLIDKTN 60
           MKKGGSSQVGAVAHNVIKGNKSIKLYPRYKLRQLLMPANKCQSFFFF VYIYIPLIDKTN
Sbjct: 1   MKKGGSSQVGAVAHNVIKGNKSIKLYPRYKLRQLLMPANKCQSFFFFFVYIYIPLIDKTN 60

Query: 61  LDKPRVTIYSMRFPYFTTKISPSQSLSLSLKISLQYLQSQHGFFPLNLAELIGVSSNESF 120
           LDKPRVTIYSMRFPYFTTKIS SQSLSLSLKISLQYLQSQHGFFPLNLAELIGVSSNESF
Sbjct: 61  LDKPRVTIYSMRFPYFTTKISSSQSLSLSLKISLQYLQSQHGFFPLNLAELIGVSSNESF 120

Query: 121 VRFFFFLFF 128
           +RFFFFLFF
Sbjct: 121 LRFFFFLFF 129

[Close]
BLAST of CsGy3G007680 vs. ExPASy TrEMBL
Match: A0A0A0L313 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118210 PE=4 SV=1)

HSP 1 Score: 241 bits (616), Expect = 1.98e-80
Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0 

Query: 1   MKKGGSSQVGAVAHNVIKGNKSIKLYPRYKLRQLLMPANKCQSFFFF-VYIYIPLIDKTN 60
           MKKGGSSQVGAVAHNVIKGNKSIKLYPRYKLRQLLMPANKCQSFFFF VYIYIPLIDKTN
Sbjct: 1   MKKGGSSQVGAVAHNVIKGNKSIKLYPRYKLRQLLMPANKCQSFFFFFVYIYIPLIDKTN 60

Query: 61  LDKPRVTIYSMRFPYFTTKISPSQSLSLSLKISLQYLQSQHGFFPLNLAELIGVSSNESF 120
           LDKPRVTIYSMRFPYFTTKIS SQSLSLSLKISLQYLQSQHGFFPLNLAELIGVSSNESF
Sbjct: 61  LDKPRVTIYSMRFPYFTTKISSSQSLSLSLKISLQYLQSQHGFFPLNLAELIGVSSNESF 120

Query: 121 VRFFFFLFF 128
           +RFFFFLFF
Sbjct: 121 LRFFFFLFF 129

The following BLAST results are available for this feature:
BLAST of CsGy3G007680 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G007680 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56385.14.08e-8097.67hypothetical protein Csa_010852 [Cucumis sativus][more]
BLAST of CsGy3G007680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3131.98e-8097.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118210 PE=4 SV=1[more]
BLAST of CsGy3G007680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G007680.2CsGy3G007680.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane