Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCAACACCCCCACCATCTTCTTTCTCCTTCTCCCTTTTCCCGTAACCTACCCAGCAGCAACCTACCTTCTTCTCTTCTTCTTTCTATTTTCCGTTCTATTCTACAGCCAACCACCTTTCGATCTCACGTCGACTGCCTAGCTCATCACGTCCTGAACTGTCGTGTACCAGTTTTGTTCGTGTGGTTCTTCATCTATTGGTCGGGGATCGTCTGCAGCGTCTTCATCCGCCAACCACCAACTCCATCAGGTCTTCATCCGCTACCTGTTAAGCAACCGTCGTCAGGTGCCTACTGTGAACCTGAGTCGAACCCAAGCTGA mRNA sequence ATGCAACACCCCCACCATCTTCTTTCTCCTTCTCCCTTTTCCCGTAACCTACCCAGCAGCAACCTACCTTCTTCTCTTCTTCTTTCTATTTTCCGTTCTATTCTACAGCCAACCACCTTTCGATCTCACGTCGACTGCCTAGCTCATCACGTCCTGAACTGTCGTGTACCAGTTTTGTTCGTGTGGTTCTTCATCTATTGGTCGGGGATCGTCTGCAGCGTCTTCATCCGCCAACCACCAACTCCATCAGGTCTTCATCCGCTACCTGTTAAGCAACCGTCGTCAGGTGCCTACTGTGAACCTGAGTCGAACCCAAGCTGA Coding sequence (CDS) ATGCAACACCCCCACCATCTTCTTTCTCCTTCTCCCTTTTCCCGTAACCTACCCAGCAGCAACCTACCTTCTTCTCTTCTTCTTTCTATTTTCCGTTCTATTCTACAGCCAACCACCTTTCGATCTCACGTCGACTGCCTAGCTCATCACGTCCTGAACTGTCGTGTACCAGTTTTGTTCGTGTGGTTCTTCATCTATTGGTCGGGGATCGTCTGCAGCGTCTTCATCCGCCAACCACCAACTCCATCAGGTCTTCATCCGCTACCTGTTAAGCAACCGTCGTCAGGTGCCTACTGTGAACCTGAGTCGAACCCAAGCTGA Protein sequence MQHPHHLLSPSPFSRNLPSSNLPSSLLLSIFRSILQPTTFRSHVDCLAHHVLNCRVPVLFVWFFIYWSGIVCSVFIRQPPTPSGLHPLPVKQPSSGAYCEPESNPS*
Homology
BLAST of CsGy7G008735.1 vs. NCBI nr
Match: KGN44083.1 (hypothetical protein Csa_015922 [Cucumis sativus]) HSP 1 Score: 224 bits (572), Expect = 3.99e-74 Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 0
Query: 1 MQHPHHLLSPSPFSRNLPSSNLPSSLLLSIFRSILQPTTFRSHVDCLAHHVLNCRVPVLF 60
MQHPHHL+SPSPFSRNLPSSNLPSSLLLSIFRSILQPTTFRSHVDCLAHHVLNCRVPVLF
Sbjct: 1 MQHPHHLVSPSPFSRNLPSSNLPSSLLLSIFRSILQPTTFRSHVDCLAHHVLNCRVPVLF 60
Query: 61 VWFFIYWSGIVCSVFIRQPPTPSGLHPLPVKQPSSGAYCEPESNPS 106
VWFFIYWSGIVCSVFIRQPPTPSGLHPLPVKQPSSGAYCEPESNPS
Sbjct: 61 VWFFIYWSGIVCSVFIRQPPTPSGLHPLPVKQPSSGAYCEPESNPS 106
BLAST of CsGy7G008735.1 vs. ExPASy TrEMBL
Match: A0A0A0K3K8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G176620 PE=4 SV=1) HSP 1 Score: 224 bits (572), Expect = 1.93e-74 Identity = 105/106 (99.06%), Postives = 106/106 (100.00%), Query Frame = 0
Query: 1 MQHPHHLLSPSPFSRNLPSSNLPSSLLLSIFRSILQPTTFRSHVDCLAHHVLNCRVPVLF 60
MQHPHHL+SPSPFSRNLPSSNLPSSLLLSIFRSILQPTTFRSHVDCLAHHVLNCRVPVLF
Sbjct: 1 MQHPHHLVSPSPFSRNLPSSNLPSSLLLSIFRSILQPTTFRSHVDCLAHHVLNCRVPVLF 60
Query: 61 VWFFIYWSGIVCSVFIRQPPTPSGLHPLPVKQPSSGAYCEPESNPS 106
VWFFIYWSGIVCSVFIRQPPTPSGLHPLPVKQPSSGAYCEPESNPS
Sbjct: 61 VWFFIYWSGIVCSVFIRQPPTPSGLHPLPVKQPSSGAYCEPESNPS 106
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KGN44083.1 | 3.99e-74 | 99.06 | hypothetical protein Csa_015922 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K3K8 | 1.93e-74 | 99.06 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G176620 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 86..106 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsGy7G008735.1.exon1 | CsGy7G008735.1.exon1 | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Type |
|---|
| cds.CsGy7G008735.1 | cds.CsGy7G008735.1 | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Type |
|---|
| CsGy7G008735.1 | CsGy7G008735.1-protein | polypeptide |
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
|
