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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. GTGTGTATATAGCTATATGTTTTTTGAAAAAATTCCCCAAAACGTGTATAAGTATAAAGTATGTGTCAAAAACCATGTGTGTTGAAGGCGTTGGATTGGCGTGTTTGAAGGAAGAAATTAGACTCCTAAAAAACCAAAGCACTAACGCCCACAGGAAACTCCCAATTTCCCTCTTTTTCACTTCTTAGTTTTACCTACAAAAACCTTCATTCCCATTCTCAAACCAAATTTAATTCACAATCAATTATGGCTCCCACTGCAGCAATGCTCATTCTCTCCCACACCCACCACCATTCTTCTCTCCCCATCTCCGGCCACCCACCGCCACCAACGCCGCCCCCTTCCTCCACCTGCAGGACACTAATTTCATCTGCCTTTGCCAAACTCAAAATTCTCCTAATTCCTACTCCCACTTCTTCTTACTCTTCTAATTCTCAATCTTCTAAAGTCAGCATTTTAGAAGTATTTGAATCTGCCAACTTCTCGGGTTGGTAATTAATCAATTCAGATTTATCATTTTTCTTTCTTATTTGTAGCTGCTAATTTTGTACAAATTTAAGTATAGGTATTGATTTCATTTTGTTTTGGCTTTAATTTATGTAATGTAATGTAATGGTGCATTTATGTGAATAAAAAGAAACAATGTTATTGCTCCCATCTATAGAATAAGGTATTAATAACACAATACGTGCAACTAAATTAGGAACAGAAATAAAATGATAAAAAACTGTGTTTTATTATTATTATTAATTATGTGTTTAGATGTATTCATCCAAAATCAAATAAATAGAACATTTCATTCAATGAATTTGATTGTCCCA mRNA sequence GTGTGTATATAGCTATATGTTTTTTGAAAAAATTCCCCAAAACGTGTATAAGTATAAAGTATGTGTCAAAAACCATGTGTGTTGAAGGCGTTGGATTGGCGTGTTTGAAGGAAGAAATTAGACTCCTAAAAAACCAAAGCACTAACGCCCACAGGAAACTCCCAATTTCCCTCTTTTTCACTTCTTAGTTTTACCTACAAAAACCTTCATTCCCATTCTCAAACCAAATTTAATTCACAATCAATTATGGCTCCCACTGCAGCAATGCTCATTCTCTCCCACACCCACCACCATTCTTCTCTCCCCATCTCCGGCCACCCACCGCCACCAACGCCGCCCCCTTCCTCCACCTGCAGGACACTAATTTCATCTGCCTTTGCCAAACTCAAAATTCTCCTAATTCCTACTCCCACTTCTTCTTACTCTTCTAATTCTCAATCTTCTAAAGTCAGCATTTTAGAAGTATTTGAATCTGCCAACTTCTCGGGTTGGTAATTAATCAATTCAGATTTATCATTTTTCTTTCTTATTTGTAGCTGCTAATTTTGTACAAATTTAAGTATAGGTATTGATTTCATTTTGTTTTGGCTTTAATTTATGTAATGTAATGTAATGGTGCATTTATGTGAATAAAAAGAAACAATGTTATTGCTCCCATCTATAGAATAAGGTATTAATAACACAATACGTGCAACTAAATTAGGAACAGAAATAAAATGATAAAAAACTGTGTTTTATTATTATTATTAATTATGTGTTTAGATGTATTCATCCAAAATCAAATAAATAGAACATTTCATTCAATGAATTTGATTGTCCCA Coding sequence (CDS) ATGGCTCCCACTGCAGCAATGCTCATTCTCTCCCACACCCACCACCATTCTTCTCTCCCCATCTCCGGCCACCCACCGCCACCAACGCCGCCCCCTTCCTCCACCTGCAGGACACTAATTTCATCTGCCTTTGCCAAACTCAAAATTCTCCTAATTCCTACTCCCACTTCTTCTTACTCTTCTAATTCTCAATCTTCTAAAGTCAGCATTTTAGAAGTATTTGAATCTGCCAACTTCTCGGGTTGGTAA Protein sequence MAPTAAMLILSHTHHHSSLPISGHPPPPTPPPSSTCRTLISSAFAKLKILLIPTPTSSYSSNSQSSKVSILEVFESANFSGW*
Homology
BLAST of CsGy4G011125 vs. NCBI nr
Match: KGN53876.1 (hypothetical protein Csa_011816 [Cucumis sativus]) HSP 1 Score: 162 bits (410), Expect = 3.67e-50 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query: 1 MAPTAAMLILSHTHHHSSLPISGHPPPPTPPPSSTCRTLISSAFAKLKILLIPTPTSSYS 60
MAPTAAMLILSHTHHHSSLPISGHPPPPTPPPSSTCRTLISSAFAKLKILLIPTPTSSYS
Sbjct: 1 MAPTAAMLILSHTHHHSSLPISGHPPPPTPPPSSTCRTLISSAFAKLKILLIPTPTSSYS 60
Query: 61 SNSQSSKVSILEVFESANFSGW 82
SNSQSSKVSILEVFESANFSGW
Sbjct: 61 SNSQSSKVSILEVFESANFSGW 82
BLAST of CsGy4G011125 vs. ExPASy TrEMBL
Match: A0A0A0L161 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179115 PE=4 SV=1) HSP 1 Score: 162 bits (410), Expect = 1.78e-50 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query: 1 MAPTAAMLILSHTHHHSSLPISGHPPPPTPPPSSTCRTLISSAFAKLKILLIPTPTSSYS 60
MAPTAAMLILSHTHHHSSLPISGHPPPPTPPPSSTCRTLISSAFAKLKILLIPTPTSSYS
Sbjct: 1 MAPTAAMLILSHTHHHSSLPISGHPPPPTPPPSSTCRTLISSAFAKLKILLIPTPTSSYS 60
Query: 61 SNSQSSKVSILEVFESANFSGW 82
SNSQSSKVSILEVFESANFSGW
Sbjct: 61 SNSQSSKVSILEVFESANFSGW 82
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KGN53876.1 | 3.67e-50 | 100.00 | hypothetical protein Csa_011816 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L161 | 1.78e-50 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179115 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 15..35 |
Relationships
The following mRNA feature(s) are a part of this gene:
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