CsaV3_5G013600 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G013600
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Encodes a protein whose expression is responsive to nematode infection.
Location	chr5: 10323635 .. 10327643 (+)
RNA-Seq Expression	CsaV3_5G013600
Synteny	CsaV3_5G013600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTCCCTATAATAAGACCCTTTAGACTAAAATTGATTTTCTCTTTTATACGCCCACCCACCACCCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTTCAAATCTCTTTTCCCTTTTGGCTGCCATGGGAAACACCTTTGGTGTCAAGAAGACGGTTAAGGTTATGAAGATCTCGGGGGAGACCATGAAACTAAAAACCCCGGTTCAAGCTGGTGATGTCGTCAAGGATTATCCTGGCTTCGTTCTACTCGAATCTGAGGCTGTTAAACACTACGGGGTTCGAGCAAAGCCTTTGGAGCTCCACCAGAAGCTCAGCACTAAGAGACTTTATTTCCTCGTCGATCTTCCTAGACTTCCAAAAGAACAGGTGTGAGCTCCTTCCACTAATTTCAGTCTCCCCTTCATGGCTATTTGGTTTTTATTTCTTGGTTTTTTAAAATCAAGCCTATCAGCTCCAATTTTATCTTTTTATTCATATTCATTATACTCATTCTTTTATTCCGCTCGAGCATTAGCGAGAGACCAAACAAATAGATTTGTTAGGAACATCATATATAAAGTAGTTAAATTTTTCCCTTTGGATATCATGTTAAGTTTAATGTTTATAATAGTAATGCCTTCCGTATAATACTAAATAGGCTCCACGACGAGTACGGTCAGCGATCAACATGAGTGCAAAGGATAGGTTAGAGAGCTTGATGTTGGCACGACGATCAGCATCGGACCTAACTATCATGAAACCAAAGAGCATGTTGACGGAGGAGGGCGGTGGAGAGAGTGAGGAGGGATCGGTATCGGGAGCGCCAACACGGGTGAAGATGCGGTTGCCGAAGGCCGAAGTGGAAAGACTGTTGAAGGAGTGCAAAGATGAGGCAGAGGCAGCAGAAAGGATTATGGGATTGTACAAAACAAGAGAAAATGCTTATGAAAATGATCATAAGGAGAAGGAGATCAAGAAGGATATCATCAAGCCACGTGAGGTGCGTATACCTTCTTCTTCTTCTTCTTTTTCTTTACATCTTTTAATTATTGCAATAAGTTAATATATTCATAAAATTTATAAGTCTATTTTGATGTCTAAAACTTTCCAGAAAATAGAAGATCTTTCAAATTTTTGACTTACAAGAAAGAAAGTACATATATTAATTTCAATAATTTTGTTTATACTTTGATGAAATGTTCTTAAAAGTAGAAAAGAAATAATTAAAATAAAGAACCCTTATCCATTATGCCAATGTAACCAATGCAACAAAATATTATAGATTTCTCGTTTGCTTTTGGAATATAATCATTAAAAATAGTGGAAAAGAAGACTAAAATATTAAAAAGGTCAAAATATAAGATGGAGGGTAAAAAAATTCATGTATGGCAATTCTATTAAATAGTAATAATTCTTTTAATTAATTTAACACATACCATTATATTAAAATGAAAACAAAAATGTTTGAGATTAAACTATACTCACATCCATATTGATTTTTAAATGTTATTAATATTTAATTGGAGATTTTGGTTCTCAAGTTGTTGCACTCTTTTTCTTTCTTTTTTCTTCTTCTTTTTTTTTTTTTTAAAAAAAAAGAGTTGGTGCAATTATAAATTAATTAAATTAAAGATGTAAATTAAAATAGAGGAAGTTGACTCACTCACCATCCAATGAGTCAATTTTTGTTTGATTTTGTGCTTCCTACAATTTTCTATTATTATTATTTTTATTTTTTTAAAAAGTTAAAAGCGAAAAATTATTAGATATAAGTTTATCTTACTATTTAACTAAAAACCTTAATAATTAAAGCTATTTATGAGCAATTTAAATAATGCAATTATACTAATTACTACACCTGAAACATACTTAATAATATAGAGACCAACTTATGTAAATCTAAAGCTTAAGATAGCTGTTTGGTAATTAAGTATATTTTGAAATATATATATATATATATATATATATATAACATGATTAGGTATATTAGAGTTCGGTAAGTTTTTCTAAGAAATCTACCAAATTGGTTATTATATTTTTAAGAACATGATTACTAAAAAAGATATTTTAAAAGTTATAGGAATTGGGAACTAATGAATTTGTTTATTGATCATAAAAGTATTAAAATCTACACAAGATTATGGTAATGATTTCATTTACGAAATTTAATGGAATTTGGACACCAAGTTGACTCTCACTATCGAATTTGTCAATTTTTGTGTGTTAATTAGTGCTTCATCTTCTAACCCATTAATCACAATCTTTTCTTAGTGTACCCATCGTTCATTGATTACATCTCTTTAATTACCTTCAAATTGTTGATATTTCAACTTTCATATGATTCTTGTTTTTCAAAATAAATAAATTATTATGGTTAATTCATATTCTGTCTTTTCTTTTCCTTTATGTCATCAACTGTAGTTTTTGTTTGATTCTTATATATATTTCTAAATTTTACTGCTTTTACTTATGAATTTTCAACTTAATTGAGCTTTCCTCTCATCATAGTTTTTAAGATTTTACAGCTTTCTTGGTGAGACTTTTTTTTTACTTTGTATTTCTATCCACCATTAGTTTAAAAGAGTTAAATTAATTATAAATCAAATTAGTTTCCATTGTTTTAATTCACAGTTGATTGAAAGTTAGTACTCGAGATCAATAGTAGGAACCTAGGGTATTAGTAAAAATCTAGAGAAAAAAAGTATTGAATCTTGAAACATGAGAACAAAATTCAAAATTTTAAAAATAAAAATAAATCGTTTAAAATTTATGGACCAGAAATAAAACTAACAACTAAACAAAATGTTGAAATCTAGAAAAGAAGAACAAATTCAAAATTATAAACTCAAGAATAAAAATAAAAGTAAAATGAGACTATTCAAACAAAAGAAAAATATAAGAGTTCAAAAGTATGAAAATCAAAAGAAAACTATACTCAAATTTAATTAAAACATATTTTTCTCAAATAGTTTCGTTAAAGAAAATCACCCATTAGTTTCTAGTAATTTAGTTCTCTCCCAATTGTTTCTGATAATCATTAATTAACTATATATTAAAATTCCAATTAACCCCATAGCATTAGTTACAATATTTTCTTATTATATAGGGTGAAGCCATCATTGCCTCCATCTCTTTCATATAGACTTTTCTACTCACAAACCATTGATATCATATAATTATTAAAGATATATACATTAAGATCAGATGTGATACTTTTTTTTTTTTTTTTTGTGAGTTATCAACAAAGTTGTAGGGTGGGGATCCACTTTAAACCTAAAAAGTGCTCTTAATAAATTAATCTTCAAATTTAGTTCTATATCTCAAATATATCAAGAATCTATATGTAATCAATTAATAAGAATATTGGTTAAATAGAGAGGATGCAAAATTGACTATCATCATCTCTAGTCAATTTTTGCTTTATTATTGCTTTATTTGCCAAACCCATTTCCCCAGTTCAATCTTATCATAATGTGGCCATTTTAATTCTATATCTTTTGCTTAAATTATTAGGGGGACTTTTTCTCTTTTAATCTCTAAGAAAGAATGGTTTGAAATAATGCAGAAACGACGTGTAAGTTTCATGACGACAATGGAAGGTGGAACTCAAATTGCAGTAGCATCTTAATATATATATTAACCAAGAAAACAAAATGACAAGATTCATAAATAAATTAAGTAAAGTGATACAGTGACGATCTTCCCATGGCTACCAGATTACGTCCTTCACTTCAACTTAATATATTTCAATATCTTGGACATCCTTTTGTAGAATATTTACTTACATTTCATTTACTGCCTTCCCCTATATGTACACCCAAATGTACTTAATTACGATATCCATCAACTTCTTCTTCATCATCATCACACACACACACACATATATATAGCTTTCTTCCTTTAAATATTCTGAAGAACGACTGCTCGATCTTTTATGGCTCAATATATAGTTTTAACTTTTTATGCCCCTACCATTTGTTTCCATTTCATTGATATTCTATTAAGTTGTAACTTCA

mRNA sequence

ATGGGAAACACCTTTGGTGTCAAGAAGACGGTTAAGGTTATGAAGATCTCGGGGGAGACCATGAAACTAAAAACCCCGGTTCAAGCTGGTGATGTCGTCAAGGATTATCCTGGCTTCGTTCTACTCGAATCTGAGGCTGTTAAACACTACGGGGTTCGAGCAAAGCCTTTGGAGCTCCACCAGAAGCTCAGCACTAAGAGACTTTATTTCCTCGTCGATCTTCCTAGACTTCCAAAAGAACAGGCTCCACGACGAGTACGGTCAGCGATCAACATGAGTGCAAAGGATAGGTTAGAGAGCTTGATGTTGGCACGACGATCAGCATCGGACCTAACTATCATGAAACCAAAGAGCATGTTGACGGAGGAGGGCGGTGGAGAGAGTGAGGAGGGATCGGTATCGGGAGCGCCAACACGGGTGAAGATGCGGTTGCCGAAGGCCGAAGTGGAAAGACTGTTGAAGGAGTGCAAAGATGAGGCAGAGGCAGCAGAAAGGATTATGGGATTGTACAAAACAAGAGAAAATGCTTATGAAAATGATCATAAGGAGAAGGAGATCAAGAAGGATATCATCAAGCCACGTGAGAAACGACGTGTAAGTTTCATGACGACAATGGAAGGTGGAACTCAAATTGCAGTAGCATCTTAA

Coding sequence (CDS)

ATGGGAAACACCTTTGGTGTCAAGAAGACGGTTAAGGTTATGAAGATCTCGGGGGAGACCATGAAACTAAAAACCCCGGTTCAAGCTGGTGATGTCGTCAAGGATTATCCTGGCTTCGTTCTACTCGAATCTGAGGCTGTTAAACACTACGGGGTTCGAGCAAAGCCTTTGGAGCTCCACCAGAAGCTCAGCACTAAGAGACTTTATTTCCTCGTCGATCTTCCTAGACTTCCAAAAGAACAGGCTCCACGACGAGTACGGTCAGCGATCAACATGAGTGCAAAGGATAGGTTAGAGAGCTTGATGTTGGCACGACGATCAGCATCGGACCTAACTATCATGAAACCAAAGAGCATGTTGACGGAGGAGGGCGGTGGAGAGAGTGAGGAGGGATCGGTATCGGGAGCGCCAACACGGGTGAAGATGCGGTTGCCGAAGGCCGAAGTGGAAAGACTGTTGAAGGAGTGCAAAGATGAGGCAGAGGCAGCAGAAAGGATTATGGGATTGTACAAAACAAGAGAAAATGCTTATGAAAATGATCATAAGGAGAAGGAGATCAAGAAGGATATCATCAAGCCACGTGAGAAACGACGTGTAAGTTTCATGACGACAATGGAAGGTGGAACTCAAATTGCAGTAGCATCTTAA

Protein sequence

MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELHQKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSMLTEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLYKTRENAYENDHKEKEIKKDIIKPREKRRVSFMTTMEGGTQIAVAS*

Homology

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BLAST of CsaV3_5G013600 vs. NCBI nr
Match: XP_004140437.1 (uncharacterized protein At1g66480 [Cucumis sativus] >KGN50757.2 hypothetical protein Csa_021521 [Cucumis sativus])

HSP 1 Score: 409.1 bits (1050), Expect = 2.4e-110
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120
           QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML
Sbjct: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120

Query: 121 TEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLYKTRENAYEND 180
           TEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLYKTRENAYEND
Sbjct: 121 TEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLYKTRENAYEND 180

Query: 181 HKEKEIKKDIIKPREKRRVSFMTTMEGGTQIAVAS 216
           HKEKEIKKDIIKPREKRRVSFMTTMEGGTQIAVAS
Sbjct: 181 HKEKEIKKDIIKPREKRRVSFMTTMEGGTQIAVAS 215

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BLAST of CsaV3_5G013600 vs. NCBI nr
Match: XP_008454773.1 (PREDICTED: uncharacterized protein At1g66480 isoform X2 [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 4.7e-98
Identity = 201/215 (93.49%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGVKKTVKVMKISGET+KL TPVQ GDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETLKLNTPVQVGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120
           QKLSTKRLYFLVDLP+LPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKS+L
Sbjct: 61  QKLSTKRLYFLVDLPKLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 TEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLYKTRENAYEND 180
           TEEGGGES EGS SGA TRVK+RLPKAEVERLLKECKDEAEAAERIMGLYKTRE+  END
Sbjct: 121 TEEGGGES-EGSGSGA-TRVKVRLPKAEVERLLKECKDEAEAAERIMGLYKTRESVCEND 180

Query: 181 HKEKEIKKDIIKPREKRRVSFMTTMEGGTQIAVAS 216
           HKEKE KKDIIKPREKRRVSFMTTME GTQIAVAS
Sbjct: 181 HKEKE-KKDIIKPREKRRVSFMTTMEAGTQIAVAS 212

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BLAST of CsaV3_5G013600 vs. NCBI nr
Match: XP_008454771.1 (PREDICTED: uncharacterized protein At1g66480 isoform X1 [Cucumis melo])

HSP 1 Score: 363.6 bits (932), Expect = 1.2e-96
Identity = 201/216 (93.06%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGVKKTVKVMKISGET+KL TPVQ GDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETLKLNTPVQVGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120
           QKLSTKRLYFLVDLP+LPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKS+L
Sbjct: 61  QKLSTKRLYFLVDLPKLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 TEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLYKTRENAYEND 180
           TEEGGGES EGS SGA TRVK+RLPKAEVERLLKECKDEAEAAERIMGLYKTRE+  END
Sbjct: 121 TEEGGGES-EGSGSGA-TRVKVRLPKAEVERLLKECKDEAEAAERIMGLYKTRESVCEND 180

Query: 181 HKEKEIKKDIIKPRE-KRRVSFMTTMEGGTQIAVAS 216
           HKEKE KKDIIKPRE KRRVSFMTTME GTQIAVAS
Sbjct: 181 HKEKE-KKDIIKPREKKRRVSFMTTMEAGTQIAVAS 213

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BLAST of CsaV3_5G013600 vs. NCBI nr
Match: XP_038891934.1 (uncharacterized protein At1g66480 [Benincasa hispida])

HSP 1 Score: 358.6 bits (919), Expect = 3.8e-95
Identity = 196/217 (90.32%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGVKKTVKVM ISGETMKL TPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMNISGETMKLNTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120
           QKLSTKRLYFLV+LP++ KEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKS+L
Sbjct: 61  QKLSTKRLYFLVELPKVSKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 TEEGGGESE-EGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLYKTRENAYEN 180
            EEGGGES+  GS SGA TRVK+RLPKAEVERLLKECKDEAEAAERIMGLYKTREN  EN
Sbjct: 121 AEEGGGESDGSGSGSGAATRVKVRLPKAEVERLLKECKDEAEAAERIMGLYKTRENVCEN 180

Query: 181 DHKEKEIKKDIIKPREKRRVSFMTTMEG-GTQIAVAS 216
           DHK++E KKDIIKPREKRRVSFMTTME  GTQIAVAS
Sbjct: 181 DHKDEE-KKDIIKPREKRRVSFMTTMEARGTQIAVAS 216

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BLAST of CsaV3_5G013600 vs. NCBI nr
Match: XP_022942789.1 (uncharacterized protein At1g66480 isoform X2 [Cucurbita moschata])

HSP 1 Score: 307.8 bits (787), Expect = 7.6e-80
Identity = 171/217 (78.80%), Postives = 190/217 (87.56%), Query Frame = 0


Query: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN FG+KKTVKVM +SG+T+KL  PVQA DVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNAFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120
           QKLSTKRLYFLV+LP++PKEQAPRRVRSAINMSAKDRLESLML+RRSASDLTIMKPKS+L
Sbjct: 61  QKLSTKRLYFLVELPKIPKEQAPRRVRSAINMSAKDRLESLMLSRRSASDLTIMKPKSVL 120

Query: 121 TEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLY--KTRENAYE 180
            EE GGE  EGS +   TRVK+RLPKAEVER+LKE KDEAEAAERIMGLY  K RE+  +
Sbjct: 121 AEE-GGEQREGSEA---TRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQ 180

Query: 181 NDHKEKEIKKDIIKPREKRRVSFMTTMEGGTQIAVAS 216
           N+ K ++ K  IIKPREKRRVSFMTT+E   QIAVA+
Sbjct: 181 NERKMEKEKDVIIKPREKRRVSFMTTIEAMPQIAVAT 213

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BLAST of CsaV3_5G013600 vs. ExPASy Swiss-Prot
Match: Q6NLC8 (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-35
Identity = 99/228 (43.42%), Postives = 141/228 (61.84%), Query Frame = 0


Query: 1   MGNTFGVK-KTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLEL 60
           MGN+  VK K  KVMKI GET ++KTPV A +V  DYPG+VLL+S+AVKH+GVR+KPLE 
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  HQKLSTKRLYFLVDLPRLPKEQAP---------RRVRSAINMSAKDRLESLMLARRSASD 120
           +Q L  K+ YFLV+LP+LP E            RRV S I++ AK+RL+ LML+RR+ SD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 121 LTIMKPKSMLTEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEA-AERIMGL 180
           +TI +         GG+     +    T V++RLP++++ +L++E  ++A A AE+I+G+
Sbjct: 121 VTIGR-------SDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGI 180

Query: 181 YKTRENAYENDH----KEKEIKKDIIKPREKRRVSFMTTMEGGTQIAV 214
           Y  R              +E+    IK REK +VSF    EGG ++ V
Sbjct: 181 YMERSGELGGGRGGVDGRRELGSGEIKAREK-QVSF--AGEGGRELPV 218

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BLAST of CsaV3_5G013600 vs. ExPASy TrEMBL
Match: A0A1S3C0K8 (uncharacterized protein At1g66480 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495093 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.3e-98
Identity = 201/215 (93.49%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGVKKTVKVMKISGET+KL TPVQ GDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETLKLNTPVQVGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120
           QKLSTKRLYFLVDLP+LPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKS+L
Sbjct: 61  QKLSTKRLYFLVDLPKLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 TEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLYKTRENAYEND 180
           TEEGGGES EGS SGA TRVK+RLPKAEVERLLKECKDEAEAAERIMGLYKTRE+  END
Sbjct: 121 TEEGGGES-EGSGSGA-TRVKVRLPKAEVERLLKECKDEAEAAERIMGLYKTRESVCEND 180

Query: 181 HKEKEIKKDIIKPREKRRVSFMTTMEGGTQIAVAS 216
           HKEKE KKDIIKPREKRRVSFMTTME GTQIAVAS
Sbjct: 181 HKEKE-KKDIIKPREKRRVSFMTTMEAGTQIAVAS 212

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BLAST of CsaV3_5G013600 vs. ExPASy TrEMBL
Match: A0A1S3BZC7 (uncharacterized protein At1g66480 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495093 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.7e-97
Identity = 201/216 (93.06%), Postives = 206/216 (95.37%), Query Frame = 0


Query: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFGVKKTVKVMKISGET+KL TPVQ GDVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNTFGVKKTVKVMKISGETLKLNTPVQVGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120
           QKLSTKRLYFLVDLP+LPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKS+L
Sbjct: 61  QKLSTKRLYFLVDLPKLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSVL 120

Query: 121 TEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLYKTRENAYEND 180
           TEEGGGES EGS SGA TRVK+RLPKAEVERLLKECKDEAEAAERIMGLYKTRE+  END
Sbjct: 121 TEEGGGES-EGSGSGA-TRVKVRLPKAEVERLLKECKDEAEAAERIMGLYKTRESVCEND 180

Query: 181 HKEKEIKKDIIKPRE-KRRVSFMTTMEGGTQIAVAS 216
           HKEKE KKDIIKPRE KRRVSFMTTME GTQIAVAS
Sbjct: 181 HKEKE-KKDIIKPREKKRRVSFMTTMEAGTQIAVAS 213

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BLAST of CsaV3_5G013600 vs. ExPASy TrEMBL
Match: A0A6J1FSC9 (uncharacterized protein At1g66480 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447718 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.7e-80
Identity = 171/217 (78.80%), Postives = 190/217 (87.56%), Query Frame = 0


Query: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN FG+KKTVKVM +SG+T+KL  PVQA DVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNAFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120
           QKLSTKRLYFLV+LP++PKEQAPRRVRSAINMSAKDRLESLML+RRSASDLTIMKPKS+L
Sbjct: 61  QKLSTKRLYFLVELPKIPKEQAPRRVRSAINMSAKDRLESLMLSRRSASDLTIMKPKSVL 120

Query: 121 TEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLY--KTRENAYE 180
            EE GGE  EGS +   TRVK+RLPKAEVER+LKE KDEAEAAERIMGLY  K RE+  +
Sbjct: 121 AEE-GGEQREGSEA---TRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQ 180

Query: 181 NDHKEKEIKKDIIKPREKRRVSFMTTMEGGTQIAVAS 216
           N+ K ++ K  IIKPREKRRVSFMTT+E   QIAVA+
Sbjct: 181 NERKMEKEKDVIIKPREKRRVSFMTTIEAMPQIAVAT 213

[Close]

BLAST of CsaV3_5G013600 vs. ExPASy TrEMBL
Match: A0A6J1DRH0 (uncharacterized protein At1g66480 OS=Momordica charantia OX=3673 GN=LOC111022499 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.2e-78
Identity = 168/220 (76.36%), Postives = 188/220 (85.45%), Query Frame = 0


Query: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGNTFG K+TVKVMKI+GETMKLK+PVQAGDVVKDYPGFVLLESE VKHYGVRAKPLE H
Sbjct: 1   MGNTFGAKRTVKVMKITGETMKLKSPVQAGDVVKDYPGFVLLESEVVKHYGVRAKPLEDH 60

Query: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120
           QKLS KRLYFLV+LP++PKEQ PRRVRSAINMSAKDRLESLMLARRSASDL IMKPKS+L
Sbjct: 61  QKLSPKRLYFLVELPKVPKEQVPRRVRSAINMSAKDRLESLMLARRSASDLYIMKPKSVL 120

Query: 121 TEEGGGESEEGSVSGA-PTRVKMRLPKAEVERLLKECKDEAEAAERIMGLY----KTREN 180
            EE GG   EG+VSG+  T+VK+RLP+AEVERLLKE +DEAEAAE+I+G Y    + + +
Sbjct: 121 LEESGGGEGEGAVSGSGSTQVKVRLPRAEVERLLKESRDEAEAAEKIVGFYMDKNRQQTS 180

Query: 181 AYENDHKEKEIKKDIIKPREKRRVSFMTTMEGGTQIAVAS 216
             +N H  KE K + IKPREKRRVSFM T E GTQIAVAS
Sbjct: 181 VPQNSHNYKE-KPEDIKPREKRRVSFMATREVGTQIAVAS 219

[Close]

BLAST of CsaV3_5G013600 vs. ExPASy TrEMBL
Match: A0A6J1FVP5 (uncharacterized protein At1g66480 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447718 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.5e-78
Identity = 171/220 (77.73%), Postives = 190/220 (86.36%), Query Frame = 0


Query: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN FG+KKTVKVM +SG+T+KL  PVQA DVVKDYPGFVLLESEAVKHYGVRAKPLELH
Sbjct: 1   MGNAFGLKKTVKVMTVSGDTIKLTPPVQARDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60

Query: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120
           QKLSTKRLYFLV+LP++PKEQAPRRVRSAINMSAKDRLESLML+RRSASDLTIMKPKS+L
Sbjct: 61  QKLSTKRLYFLVELPKIPKEQAPRRVRSAINMSAKDRLESLMLSRRSASDLTIMKPKSVL 120

Query: 121 TEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLY--KTRENAYE 180
            EE GGE  EGS +   TRVK+RLPKAEVER+LKE KDEAEAAERIMGLY  K RE+  +
Sbjct: 121 AEE-GGEQREGSEA---TRVKVRLPKAEVERVLKESKDEAEAAERIMGLYMAKARESVCQ 180

Query: 181 NDHKEKEIKKDIIKPRE---KRRVSFMTTMEGGTQIAVAS 216
           N+ K ++ K  IIKPRE   KRRVSFMTT+E   QIAVA+
Sbjct: 181 NERKMEKEKDVIIKPREKMQKRRVSFMTTIEAMPQIAVAT 216

[Close]

BLAST of CsaV3_5G013600 vs. TAIR 10
Match: AT2G01340.1 (Encodes a protein whose expression is responsive to nematode infection. )

HSP 1 Score: 191.8 bits (486), Expect = 5.7e-49
Identity = 121/227 (53.30%), Postives = 154/227 (67.84%), Query Frame = 0


Query: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN+ G KKT KVMKI GET KLKTPV A +V+KD+PG VLL+SE+VKHYG RAKPLE  
Sbjct: 1   MGNSLGGKKTTKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKPLEAK 60

Query: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120
           Q+L  KRLYF+V+     KE  PRRVRS I++SAK+RLESLMLARRS+SDL+I+KP    
Sbjct: 61  QRLEAKRLYFVVE---PVKECPPRRVRSGIHVSAKERLESLMLARRSSSDLSILKP---- 120

Query: 121 TEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLY---KTRENAY 180
              GG  +EE    GA  RVK+R+PKAE+E+L+KE   EAEA ++I  L+   + +E AY
Sbjct: 121 --PGGWTTEE--EEGAVRRVKVRIPKAELEKLVKEGATEAEATQKIAALFMAKQRQEEAY 180

Query: 181 ENDHKEKEIKKDI----------IKPREKRRVSFMTTMEGGTQIAVA 215
           +N  +++                +K R K RVSFM    GG++I VA
Sbjct: 181 QNTRQDEPATTATATATTTATRGVKSRLK-RVSFMAERGGGSEITVA 215

[Close]

BLAST of CsaV3_5G013600 vs. TAIR 10
Match: AT1G71015.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 171.8 bits (434), Expect = 6.1e-43
Identity = 94/169 (55.62%), Postives = 125/169 (73.96%), Query Frame = 0


Query: 1   MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELH 60
           MGN+ G KKT  +M I+GE+ KLKTPV+AG VVKD+PG VLLESEAVK  G+RAKPLE H
Sbjct: 1   MGNSLGTKKTATIMNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAKPLEPH 60

Query: 61  QKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSML 120
           Q L +KR+YF+V+LPR  KE+ PRRVRS I MSAK+RLE+L L+RRS+SDL++MK K+ +
Sbjct: 61  QNLESKRIYFMVELPRTWKERTPRRVRSGIQMSAKERLENLKLSRRSSSDLSVMKKKTEV 120

Query: 121 TEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGL 170
            +      EE  VS     VK++LPK ++E+L KE +  ++ + +I  L
Sbjct: 121 ND------EEREVSS----VKLKLPKWKIEKLRKESESGSDFSNKITQL 159

[Close]

BLAST of CsaV3_5G013600 vs. TAIR 10
Match: AT1G66480.1 (plastid movement impaired 2 )

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 99/228 (43.42%), Postives = 141/228 (61.84%), Query Frame = 0


Query: 1   MGNTFGVK-KTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLEL 60
           MGN+  VK K  KVMKI GET ++KTPV A +V  DYPG+VLL+S+AVKH+GVR+KPLE 
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEP 60

Query: 61  HQKLSTKRLYFLVDLPRLPKEQAP---------RRVRSAINMSAKDRLESLMLARRSASD 120
           +Q L  K+ YFLV+LP+LP E            RRV S I++ AK+RL+ LML+RR+ SD
Sbjct: 61  NQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSD 120

Query: 121 LTIMKPKSMLTEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEA-AERIMGL 180
           +TI +         GG+     +    T V++RLP++++ +L++E  ++A A AE+I+G+
Sbjct: 121 VTIGR-------SDGGDGFGPELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGI 180

Query: 181 YKTRENAYENDH----KEKEIKKDIIKPREKRRVSFMTTMEGGTQIAV 214
           Y  R              +E+    IK REK +VSF    EGG ++ V
Sbjct: 181 YMERSGELGGGRGGVDGRRELGSGEIKAREK-QVSF--AGEGGRELPV 218

[Close]

BLAST of CsaV3_5G013600 vs. TAIR 10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 128.6 bits (322), Expect = 5.9e-30
Identity = 82/178 (46.07%), Postives = 109/178 (61.24%), Query Frame = 0


Query: 1   MGNTFGVKKT-VKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLEL 60
           MGNT  V++  VKVMKI G+  +LKTPV A D  K+YPGFVLL+SE VK  GVRAKPLE 
Sbjct: 1   MGNTIMVRRNKVKVMKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEP 60

Query: 61  HQKLSTKRLYFLVDLPRLPKEQ--APRRVRSA-INMSAKDRLESLMLARRSASDLTIMKP 120
           +Q L     YFLVDLP + K      RRV S  I++ AK+RLE LML+RR+ SD+     
Sbjct: 61  NQILKPNHTYFLVDLPPVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSDV----- 120

Query: 121 KSMLTEEGGGESEEGSVSGAP----TRVKMRLPKAEVERLLKECKDEAEAAERIMGLY 171
                    G +    V   P    TRV++RLP++++ +L++E  D +E A +I+  Y
Sbjct: 121 ---------GAARSDVVGDGPELGHTRVRLRLPRSQITKLMEESHDASEVAAKIISAY 164

The following BLAST results are available for this feature:

BLAST of CsaV3_5G013600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140437.1	2.4e-110	100.00	uncharacterized protein At1g66480 [Cucumis sativus] >KGN50757.2 hypothetical pro...	[more]
XP_008454773.1	4.7e-98	93.49	PREDICTED: uncharacterized protein At1g66480 isoform X2 [Cucumis melo]	[more]
XP_008454771.1	1.2e-96	93.06	PREDICTED: uncharacterized protein At1g66480 isoform X1 [Cucumis melo]	[more]
XP_038891934.1	3.8e-95	90.32	uncharacterized protein At1g66480 [Benincasa hispida]	[more]
XP_022942789.1	7.6e-80	78.80	uncharacterized protein At1g66480 isoform X2 [Cucurbita moschata]	[more]

BLAST of CsaV3_5G013600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NLC8	2.0e-35	43.42	Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 P...	[more]

BLAST of CsaV3_5G013600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C0K8	2.3e-98	93.49	uncharacterized protein At1g66480 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A1S3BZC7	5.7e-97	93.06	uncharacterized protein At1g66480 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1FSC9	3.7e-80	78.80	uncharacterized protein At1g66480 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1DRH0	1.2e-78	76.36	uncharacterized protein At1g66480 OS=Momordica charantia OX=3673 GN=LOC111022499...	[more]
A0A6J1FVP5	1.5e-78	77.73	uncharacterized protein At1g66480 isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of CsaV3_5G013600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01340.1	5.7e-49	53.30	Encodes a protein whose expression is responsive to nematode infection.	[more]
AT1G71015.1	6.1e-43	55.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G66480.1	1.4e-36	43.42	plastid movement impaired 2	[more]
AT5G37840.1	5.9e-30	46.07	BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 146..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..137
None	No IPR available	PANTHER	PTHR33148:SF3	PLASTID MOVEMENT IMPAIRED PROTEIN	coord: 1..206
None	No IPR available	PANTHER	PTHR33148	PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED	coord: 1..206
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..164 e-value: 2.5E-19 score: 70.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G013600.1	CsaV3_5G013600.1	mRNA