CsaV3_4G011850 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGATGGAGTGAGTAATAATAATAATAATAGAAATGAGGAGAAGAAGTTGGGATCATGGCCGCCGCGGACAGCGGAGAATGAGATTAGAATGAGAAAGTCAACGCCGGCGCCGTTTCTGATGAAGACTTACCGGATGGTGGAGGATCCGGCGACGGACGACGTGATATCGTGGAACAGCGACGGCACGGCGTTTGTGGTTTGGCAGACGGCGGAATTTGCTAAAGATGTTTTGCCAAAGCTCTTTAAGCATTCCAATTTCTCTAGCTTTGTTCGCCAACTTAATACCTATGTACGTTTTTCTTATTTACCTATTTCATAATACACTAAACAACTTTATTATTATTATTTTTTTTAATTTTATGGTTCTTCAAATTCTCAAAATTTAAAGATTATGTAATGTAAAATTGGCCAACTTAATTTGGTTGTGTTAAATGGGTTTGTTCCGAGTTGAACTAATCAATTTGTAACATAGAAAAGAAAAAAAAACACTATTGGACACAAAGAAAAAAAGAAGAGGAGTAATTACAATGGGTAGTTCTTTTAGACCTAACAAGTATTAGGAAGAAAAAAGAAACCCCTTAGAAGTGAATCCCAAACTATACGTTTGTGTCTAATTGAATCTACTAAAATTAATTTATAGAAAGATAAAAGAATAGAAAAAAAAAACAAAAACTATTGAACTTTTCTATTTAGAGTTTGCTCGTTAACTTTGCATTCTAAAGTTCCATCAATTTCTCATGGTTGTATATAATTGCCTCATAAATCATCACCCATTTATTTGAATATTATATTACTTTCAAAAGGCTAATAAGAAAACTAAATAAATAATATCTTCTCCTTAAAATTTAATCTTATTTGAAAATGTAAGAAAGAAAACACCTTGTTGAAATACAAAACTCAACTCAACCTATTCCATTTTCTTATTCAATTTTTGTTTCAATTTTTTTTACCCTGATAGATGTCTATTTGCTCTATAAGAATCTATTAAAAATTTCCTATATTTATAAATATTTTCAGTTGTTATCATTAATCTTTTTTGTAATTTTCCAATTTTTTAATTAAAACTTAACAAAACCTAAACCCCTCTTTCAAAATTGTATTTTATTTTATCTCAATCAGATAATTGTTTTACCCTTGTATTCTTTAAAACCAAAACAGGAAACAAAGTAAATATATTTATTGAAAAAAAAAGGTTAATATATATTTTAACAAATTAATACAGGACTTTAATAATTATTAGTTTTAAAGTAAATTAATACTTCATTTGTCAGGTTCATAATAAATTTAGAATTATTTTCTTCTTTTTTATTTTGACTAAATTGATATTTCTGGTCCTACTTGAGACTTTAGGTGAGATTTTGACATCCACAACTTTAGTTTGCTAATTAAGTTTGATTTGCATTCATATTTCAGGCCCAAAAAATGATTTAAGTTGTACTTGTAGTTGTCTGACCTAACTTGATTTGAATTTGCATCATAATATTTTTTTTTATTTGACATGTTTAATTAACTTTTTCACAAATAAATTAATGAATCATATTTGTTACCTATCTAAAAGAATGAAAACAAAATAAGAGAATTAATTTTTTCACAAATAAATTAATGAATCATATTTGTTACCCATCTAAAGGAATGAAAACAAAATAAGACAAACTTCAAAGCCTTAAAAAATCCCTATTAAGTATTAATTAAGCATTCTCATTTTTTTTGGGTTCCTTTTTTTTGTTATCGAAATTATTTTTCATTAAATATGGAAATTGTATATTCTTCCTTCTTTTATGCATCTTTGCAAAGTTCCATTTTTTTAGACGTTCTTTTGTCATCAAAAGTTAGGTGATAGGAATTCTAATTATTATTTAATTTTCCAAAATATAATGTACATTTCAAACAATAACAATTTTTTTCACTTGTTTACTATGTAATATATACATATAAAACTTGTTTACTGCATAGTAATTCTTTTTTATCACAAAAACATGTTTATTGTATAAATCTAATACCAGAAGTTAGCCTCATGTTAAAATCGGTTCAAACCCCCATAAAAAAGATTTATGGATCCACCTTGGCTAGCAAACAAGGTTGGCTAAATAAAATCCACTAAGCTGGTCTCTTTATTTAGATTCTTGAGTTATCAGACTTGAGAAACATACTAAGCAACTAAGATTTCAAAACCATTTCCAGGAAGTTGAAAATTAAACTAGGCATAAATCTTATTCATTCAAAATAGGGATTTATTTGTGTTTCTTTTTTGGAAAATAAAACTATAAATTGTTCAAGCCTTTTCTAATCAAGTTGCAAATTTTTTTATTCGTGTGTTTTTTTCTCTTGTTGAAGGGATTTCGGAAAGTGAGAACAACAAGGTGGGAGTTTTGCAATGAGAAATTTCAAAAGGGTGAAAAGGAAAAGCTTTGTGAAATACGTAGAAGAAAGAAATGGAGGAATAAGCGACAACACGAGGTAGATGAAGATCAAAGATCGACCTCATCAAACTCATCATCTTCACAGTACATTACTCTAATGGACGAGAACAAGAGGTTGAAGAAGGAAAATGGGGCCTTAAGCTCAGAACTTGCAAGCATGAAAAACAAATGCAAAGGGCTTTTTGATTTGGTGGCTACGTATGAAAATATTTCAAAGAAAGAAGATGAAGATGTGAGGCCAAAGCTGTTTGGAGTAAGGTTGGAAGGAGAGAGAGAGAGGAAGATAAAAAGGGGAGAAGAGATTAGTGAAACTACAACTATTTTGCTATCTCAATCATGCAAATGAAGGTCAATGTGGAGAATTTGGCAATATTATTATTCTTAATATTATAGTTTAAAAAGGCCACTAAAAAGTCACGTGGCTTATAGGATTATTAAGCCAGGCAATAGTGCATTATGAAGTATATATCTGT ATGGAGGATGGAGTGAGTAATAATAATAATAATAGAAATGAGGAGAAGAAGTTGGGATCATGGCCGCCGCGGACAGCGGAGAATGAGATTAGAATGAGAAAGTCAACGCCGGCGCCGTTTCTGATGAAGACTTACCGGATGGTGGAGGATCCGGCGACGGACGACGTGATATCGTGGAACAGCGACGGCACGGCGTTTGTGGTTTGGCAGACGGCGGAATTTGCTAAAGATGTTTTGCCAAAGCTCTTTAAGCATTCCAATTTCTCTAGCTTTGTTCGCCAACTTAATACCTATGGATTTCGGAAAGTGAGAACAACAAGGTGGGAGTTTTGCAATGAGAAATTTCAAAAGGGTGAAAAGGAAAAGCTTTGTGAAATACGTAGAAGAAAGAAATGGAGGAATAAGCGACAACACGAGGTAGATGAAGATCAAAGATCGACCTCATCAAACTCATCATCTTCACAGTACATTACTCTAATGGACGAGAACAAGAGGTTGAAGAAGGAAAATGGGGCCTTAAGCTCAGAACTTGCAAGCATGAAAAACAAATGCAAAGGGCTTTTTGATTTGGTGGCTACGTATGAAAATATTTCAAAGAAAGAAGATGAAGATGTGAGGCCAAAGCTGTTTGGAGTAAGGTTGGAAGGAGAGAGAGAGAGGAAGATAAAAAGGGGAGAAGAGATTAGTGAAACTACAACTATTTTGCTATCTCAATCATGCAAATGA ATGGAGGATGGAGTGAGTAATAATAATAATAATAGAAATGAGGAGAAGAAGTTGGGATCATGGCCGCCGCGGACAGCGGAGAATGAGATTAGAATGAGAAAGTCAACGCCGGCGCCGTTTCTGATGAAGACTTACCGGATGGTGGAGGATCCGGCGACGGACGACGTGATATCGTGGAACAGCGACGGCACGGCGTTTGTGGTTTGGCAGACGGCGGAATTTGCTAAAGATGTTTTGCCAAAGCTCTTTAAGCATTCCAATTTCTCTAGCTTTGTTCGCCAACTTAATACCTATGGATTTCGGAAAGTGAGAACAACAAGGTGGGAGTTTTGCAATGAGAAATTTCAAAAGGGTGAAAAGGAAAAGCTTTGTGAAATACGTAGAAGAAAGAAATGGAGGAATAAGCGACAACACGAGGTAGATGAAGATCAAAGATCGACCTCATCAAACTCATCATCTTCACAGTACATTACTCTAATGGACGAGAACAAGAGGTTGAAGAAGGAAAATGGGGCCTTAAGCTCAGAACTTGCAAGCATGAAAAACAAATGCAAAGGGCTTTTTGATTTGGTGGCTACGTATGAAAATATTTCAAAGAAAGAAGATGAAGATGTGAGGCCAAAGCTGTTTGGAGTAAGGTTGGAAGGAGAGAGAGAGAGGAAGATAAAAAGGGGAGAAGAGATTAGTGAAACTACAACTATTTTGCTATCTCAATCATGCAAATGA MEDGVSNNNNNRNEEKKLGSWPPRTAENEIRMRKSTPAPFLMKTYRMVEDPATDDVISWNSDGTAFVVWQTAEFAKDVLPKLFKHSNFSSFVRQLNTYGFRKVRTTRWEFCNEKFQKGEKEKLCEIRRRKKWRNKRQHEVDEDQRSTSSNSSSSQYITLMDENKRLKKENGALSSELASMKNKCKGLFDLVATYENISKKEDEDVRPKLFGVRLEGERERKIKRGEEISETTTILLSQSCK* Homology
BLAST of CsaV3_4G011850 vs. NCBI nr
Match: XP_004149402.1 (heat stress transcription factor B-3 [Cucumis sativus] >KAE8649359.1 hypothetical protein Csa_019122 [Cucumis sativus]) HSP 1 Score: 473.8 bits (1218), Expect = 9.0e-130 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. NCBI nr
Match: TYK11083.1 (heat stress transcription factor B-3 [Cucumis melo var. makuwa]) HSP 1 Score: 424.1 bits (1089), Expect = 8.2e-115 Identity = 221/241 (91.70%), Postives = 227/241 (94.19%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. NCBI nr
Match: XP_038883399.1 (heat stress transcription factor B-3-like [Benincasa hispida]) HSP 1 Score: 370.9 bits (951), Expect = 8.2e-99 Identity = 197/242 (81.40%), Postives = 214/242 (88.43%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. NCBI nr
Match: XP_008460754.2 (PREDICTED: heat stress transcription factor B-3 [Cucumis melo] >KAA0056168.1 heat stress transcription factor B-3 [Cucumis melo var. makuwa]) HSP 1 Score: 365.2 bits (936), Expect = 4.5e-97 Identity = 187/206 (90.78%), Postives = 194/206 (94.17%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. NCBI nr
Match: XP_022928625.1 (heat stress transcription factor B-3 [Cucurbita moschata]) HSP 1 Score: 337.4 bits (864), Expect = 1.0e-88 Identity = 190/247 (76.92%), Postives = 205/247 (83.00%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. ExPASy Swiss-Prot
Match: O22230 (Heat stress transcription factor B-3 OS=Arabidopsis thaliana OX=3702 GN=HSFB3 PE=1 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 6.4e-46 Identity = 122/241 (50.62%), Postives = 144/241 (59.75%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. ExPASy Swiss-Prot
Match: P22335 (Heat shock factor protein HSF24 OS=Solanum peruvianum OX=4082 GN=HSF24 PE=2 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 9.0e-40 Identity = 93/192 (48.44%), Postives = 120/192 (62.50%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. ExPASy Swiss-Prot
Match: Q7XRX3 (Heat stress transcription factor B-2a OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2A PE=2 SV=2) HSP 1 Score: 154.5 bits (389), Expect = 1.6e-36 Identity = 100/224 (44.64%), Postives = 127/224 (56.70%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. ExPASy Swiss-Prot
Match: Q96320 (Heat stress transcription factor B-1 OS=Arabidopsis thaliana OX=3702 GN=HSFB1 PE=2 SV=2) HSP 1 Score: 151.4 bits (381), Expect = 1.3e-35 Identity = 92/217 (42.40%), Postives = 128/217 (58.99%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. ExPASy Swiss-Prot
Match: Q6Z9C8 (Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2B PE=2 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.3e-35 Identity = 86/204 (42.16%), Postives = 118/204 (57.84%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. ExPASy TrEMBL
Match: A0A5D3CGR4 (Heat stress transcription factor B-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00700 PE=3 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 3.9e-115 Identity = 221/241 (91.70%), Postives = 227/241 (94.19%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. ExPASy TrEMBL
Match: A0A5A7UM52 (Heat stress transcription factor B-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00640 PE=3 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 2.2e-97 Identity = 187/206 (90.78%), Postives = 194/206 (94.17%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. ExPASy TrEMBL
Match: A0A1S3CD46 (heat stress transcription factor B-3 OS=Cucumis melo OX=3656 GN=LOC103499510 PE=3 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 2.2e-97 Identity = 187/206 (90.78%), Postives = 194/206 (94.17%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. ExPASy TrEMBL
Match: A0A6J1ES59 (heat stress transcription factor B-3 OS=Cucurbita moschata OX=3662 GN=LOC111435477 PE=3 SV=1) HSP 1 Score: 337.4 bits (864), Expect = 4.9e-89 Identity = 190/247 (76.92%), Postives = 205/247 (83.00%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. ExPASy TrEMBL
Match: A0A6J1HY14 (heat stress transcription factor B-3 OS=Cucurbita maxima OX=3661 GN=LOC111467268 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 1.1e-88 Identity = 189/247 (76.52%), Postives = 206/247 (83.40%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. TAIR 10
Match: AT2G41690.1 (heat shock transcription factor B3 ) HSP 1 Score: 185.7 bits (470), Expect = 4.5e-47 Identity = 122/241 (50.62%), Postives = 144/241 (59.75%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. TAIR 10
Match: AT4G36990.1 (heat shock factor 4 ) HSP 1 Score: 151.4 bits (381), Expect = 9.5e-37 Identity = 92/217 (42.40%), Postives = 128/217 (58.99%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. TAIR 10
Match: AT5G62020.1 (heat shock transcription factor B2A ) HSP 1 Score: 149.8 bits (377), Expect = 2.8e-36 Identity = 96/266 (36.09%), Postives = 139/266 (52.26%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. TAIR 10
Match: AT1G46264.1 (heat shock transcription factor B4 ) HSP 1 Score: 139.4 bits (350), Expect = 3.7e-33 Identity = 83/190 (43.68%), Postives = 107/190 (56.32%), Query Frame = 0
BLAST of CsaV3_4G011850 vs. TAIR 10
Match: AT4G11660.1 (winged-helix DNA-binding transcription factor family protein ) HSP 1 Score: 135.2 bits (339), Expect = 7.0e-32 Identity = 98/275 (35.64%), Postives = 134/275 (48.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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