CsaV3_7G022260 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G022260
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Pentatricopeptide repeat-containing protein
Location	chr7: 11164924 .. 11167980 (+)
RNA-Seq Expression	CsaV3_7G022260
Synteny	CsaV3_7G022260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAAAATCTGCGGTGAAAATAAATTTAGGGTTTTAACTTAAGTCCGTCACGCAATTGGAGATGGCAGCTTCAGCGTTCAACCATTCCGATTAGGATTACTGTCCAAAATTTTCTCATCAACACATGACTTTCAAGGCCAACTCCGTTGCTTCCGCTTCTTCTATTGTTGCAATTTCTTCCAAAGCTAAGCTATTTTCCTCTCTATTTACTCACTCTCCAACTATTCCATCATCAAATCCCCAAATTTCCTCTGCAAATCATCCTAAATCCCTACATGCATTGTCGGAACGGATTTCGCTTCAACACGGCCTTCCAATGTTCATACACAATTGCAAGAAAGGTAACATTACTTCAACTCAAGCACTCCAATTCTTTGATCTAATGATGCGTTCAATTATTTCTTTCAATCTTTTACTTGGTGCACTTGCTAAGATTAAGCATTACTCTCAAGTGTTTTCTCTCTATAAAAAAATGCACCTTGCTGGACTTTCGCCTAATTTCTTCACACTGAATATATTGATTAATTGCCTTTGTAATGTGAATCGGGTTAGGGAAGGTCTTTCGGCCATGGCGGGTATTATGAGGAGAGGTTACATTCCTGATGTAGTGACATATACTTCCTTGATTAAGGGCCTGTGTATGGAGCATAGGATTAGTGAAGCCACAAGGCTATTTATCAGAATGCAAAAGTTAGGTTGTTGGCCTAATGTTGTTACGTATGGGACTTTAATAAAGGGCCTATGTCGAACAGGGAATATTAACCTTGCACTTAAGTTGCACCAAGAAATGCTCAATGGCACTAGTCCATATGCGATTAATTGTAAGCCTAATATTTTTTCATATAATATCATCATAGATGAACTTTGTAAGATTGGAAAGTGGAAAGAGGCTAAACGTTTGTTCAATGAGATGGTGGATCAAGGTGTTAGACCAGACGTGGTTACATTTAGTGCATTGATTGATACGCTTTGCAAGGAAGGAATGGTTATCGAAGCTAAGAAGTTTCTAGAGACGATGATGCTAAGGGGTATCGTTCCTGATTTGTTTACTTTTACTTCACTTATTGAGGGGTTTTGTTTGGTTGGTGATCTGGATAGTGCTAAGGAGTTGTTCCTTAGTATGCCAAGTAAGGGATATGAACCTGATGTGATTAGTTACACTGTGCTAATCTATGGGTATTGTAAAACCTTTAACGTGGAAGAAGCAATGAAGCTTTACAATGAAATGCTTCGTGTGGGAAAGTGGCCAGATATGAAAACTTTTTGTGTACTGTTAAAAGGGCTTTTTCTTGCGGGCAAGGTTGGTGATGCAAAGAAACTATTTGGTGTCGTTAAACCTCATGCTGTTCCCAAAAATTTATATATATGTAGTGTTTTCTTAGATGGGTTGTGTAAGAATGGCTGTTTATTTGAAGCAATGGAACTTTTCAATGAGCTCAAATCATACAACATGAAATTGGACATTGAAAGCTTCAACTGTCTAATTGACGGCCTATGCAAAGCAAGGAAACTTGAAACTGCTTGGGAGCTATTTGAAAAACTATCTCAGGAAGGGCTTCAACCAGATGTTGTGACATATTGCATTATGATCAATGGATTTTGTAAAAACGGACAAGTAGATAATGCAAATATTTTATTTCAAATGATGGAAGAAAATGGTTGTACTCCTAACTTACTTACTTATAGCGCCTTGTTGCATGGTTTCTACAAAAATAATAAATTAGAGGAGGTGGTTAAACTCCTCCATAAGATGATTCAAAAGGATGTGTCACTAGCTGCTAGCATTTACACTATAGTTGAAGACATGGTTTCCAAAGATGAAAAATGTCGAGAATGGCTAGACATACTTCAAAGGTTTCCTGTCCAAAAGCATCCATCTTGATAATAAGATACCTATTGATAGACTTATTAGAAGCTATTATGTCTTGGAAATTTCTAATCAGTTTTGAGAAGGAACAACACATCATTTCATTTCATGGAAGGAGAGAGAGAAAGAGACAGGACAGATAGGAGAAAGAGACAGATAGGCCGACAATGGAGAAATTATACCTGGGAGGATCGAAAAGAAGAAAATTGGAATCATAAGTTTTTTGCTAGCAGGGGGGAGCACAAATCTTCTGGTGGTTGAGCTAGAAAAGCCCAACCACCAGCGGGGCGGAGCACAGCAGTCGACAACATTGCTCATGGGCGTGAGACTGCAGGGAAGATGTGAGAAAAAATGTGGAAATGGACAAGTGCCTAATAGCAACAGCGGAGCTCATGGGCGTTAGACTGCAGGAAAGATGTGAGAAAATGTGGAAATGGACAAGTGCCTAATAGCAACAGCGGACAGAAAGGGAGTTTGAGCTTTGACGCCTCATCAAATGCATATCGATAGTCAAAAACCAACATTAAAGATTGGTTTTTTTGTTTACTCTTCCTGGCATTGTACACCAATAATATCTAGTTTCTTGATTGTCAAAGATCAAATTTATTGTTAACGTATGAAATGAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATCTTAAGGACATCACTTCTCTTCTCCATTAATCTTTCTTCTTTCTGTTTAAGAATTTTTTAATGGTTGTCTTCTAGGCACGGTCGAGTGCATGAATGTTGAGAATCTGCAACAAAAGTTTAAAAAGATGATAAATTATGAGTTATGAATTAAAGTTATAAAATTGTTTAACACATTTAGGCAATCTACTTGATAAGATTGAATGATTAACTGTGGTACTTAATTAAACACACAAGAAATGTTAAGGTACTCTCATATTTAATTAATGTGGCAGCAAGTATTAGTAAATAATTAAAGTGTTCCAACACAACAAACGTAGATACCGATACCAGTAGACAGACATTAATGAGACAATAATAAAGTGGAAATTGTTTAAGGAGTAGATAGTTAGGATAATTCAACACAACAAACGTAGATACCGATACCAGTAGACAGACATTAATGAGACAATAATAAAGTGGAAATTGTTTAAGGAGTAGATAGTTAGGATAATTCAACACAACAAAC

mRNA sequence

ATGACTTTCAAGGCCAACTCCGTTGCTTCCGCTTCTTCTATTGTTGCAATTTCTTCCAAAGCTAAGCTATTTTCCTCTCTATTTACTCACTCTCCAACTATTCCATCATCAAATCCCCAAATTTCCTCTGCAAATCATCCTAAATCCCTACATGCATTGTCGGAACGGATTTCGCTTCAACACGGCCTTCCAATGTTCATACACAATTGCAAGAAAGGTCTTTCGGCCATGGCGGGTATTATGAGGAGAGGTTACATTCCTGATGTAGTGACATATACTTCCTTGATTAAGGGCCTGTGTATGGAGCATAGGATTAGTGAAGCCACAAGGCTATTTATCAGAATGCAAAAGTTAGGTTGTTGGCCTAATGTTGTTACGTATGGGACTTTAATAAAGGGCCTATGTCGAACAGGGAATATTAACCTTGCACTTAAGTTGCACCAAGAAATGCTCAATGGCACTAGTCCATATGCGATTAATTGTAAGCCTAATATTTTTTCATATAATATCATCATAGATGAACTTTGTAAGATTGGAAAGTGGAAAGAGGCTAAACGTTTGTTCAATGAGATGGTGGATCAAGGTGTTAGACCAGACGTGGTTACATTTAGTGCATTGATTGATACGCTTTGCAAGGAAGGAATGGTTATCGAAGCTAAGAAGTTTCTAGAGACGATGATGCTAAGGGGTATCGTTCCTGATTTGTTTACTTTTACTTCACTTATTGAGGGGTTTTGTTTGGTTGGTGATCTGGATAGTGCTAAGGAGTTGTTCCTTAGTATGCCAAGTAAGGGATATGAACCTGATGTGATTAGTTACACTGTGCTAATCTATGGGTATTGTAAAACCTTTAACGTGGAAGAAGCAATGAAGCTTTACAATGAAATGCTTCGTGTGGGAAAGTGGCCAGATATGAAAACTTTTTGTGTACTGTTAAAAGGGCTTTTTCTTGCGGGCAAGGTTGGTGATGCAAAGAAACTATTTGGTGTCGTTAAACCTCATGCTGTTCCCAAAAATTTATATATATGTAGTGTTTTCTTAGATGGGTTGTGTAAGAATGGCTGTTTATTTGAAGCAATGGAACTTTTCAATGAGCTCAAATCATACAACATGAAATTGGACATTGAAAGCTTCAACTGTCTAATTGACGGCCTATGCAAAGCAAGGAAACTTGAAACTGCTTGGGAGCTATTTGAAAAACTATCTCAGGAAGGGCTTCAACCAGATGTTGTGACATATTGCATTATGATCAATGGATTTTGTAAAAACGGACAAGTAGATAATGCAAATATTTTATTTCAAATGATGGAAGAAAATGGTTGTACTCCTAACTTACTTACTTATAGCGCCTTGTTGCATGGTTTCTACAAAAATAATAAATTAGAGGAGGTGGTTAAACTCCTCCATAAGATGATTCAAAAGGATGTGTCACTAGCTGCTAGCATTTACACTATAGTTGAAGACATGGTTTCCAAAGATGAAAAATGTCGAGAATGGCTAGACATACTTCAAAGGTTTCCTGTCCAAAAGCATCCATCTTGA

Coding sequence (CDS)

ATGACTTTCAAGGCCAACTCCGTTGCTTCCGCTTCTTCTATTGTTGCAATTTCTTCCAAAGCTAAGCTATTTTCCTCTCTATTTACTCACTCTCCAACTATTCCATCATCAAATCCCCAAATTTCCTCTGCAAATCATCCTAAATCCCTACATGCATTGTCGGAACGGATTTCGCTTCAACACGGCCTTCCAATGTTCATACACAATTGCAAGAAAGGTCTTTCGGCCATGGCGGGTATTATGAGGAGAGGTTACATTCCTGATGTAGTGACATATACTTCCTTGATTAAGGGCCTGTGTATGGAGCATAGGATTAGTGAAGCCACAAGGCTATTTATCAGAATGCAAAAGTTAGGTTGTTGGCCTAATGTTGTTACGTATGGGACTTTAATAAAGGGCCTATGTCGAACAGGGAATATTAACCTTGCACTTAAGTTGCACCAAGAAATGCTCAATGGCACTAGTCCATATGCGATTAATTGTAAGCCTAATATTTTTTCATATAATATCATCATAGATGAACTTTGTAAGATTGGAAAGTGGAAAGAGGCTAAACGTTTGTTCAATGAGATGGTGGATCAAGGTGTTAGACCAGACGTGGTTACATTTAGTGCATTGATTGATACGCTTTGCAAGGAAGGAATGGTTATCGAAGCTAAGAAGTTTCTAGAGACGATGATGCTAAGGGGTATCGTTCCTGATTTGTTTACTTTTACTTCACTTATTGAGGGGTTTTGTTTGGTTGGTGATCTGGATAGTGCTAAGGAGTTGTTCCTTAGTATGCCAAGTAAGGGATATGAACCTGATGTGATTAGTTACACTGTGCTAATCTATGGGTATTGTAAAACCTTTAACGTGGAAGAAGCAATGAAGCTTTACAATGAAATGCTTCGTGTGGGAAAGTGGCCAGATATGAAAACTTTTTGTGTACTGTTAAAAGGGCTTTTTCTTGCGGGCAAGGTTGGTGATGCAAAGAAACTATTTGGTGTCGTTAAACCTCATGCTGTTCCCAAAAATTTATATATATGTAGTGTTTTCTTAGATGGGTTGTGTAAGAATGGCTGTTTATTTGAAGCAATGGAACTTTTCAATGAGCTCAAATCATACAACATGAAATTGGACATTGAAAGCTTCAACTGTCTAATTGACGGCCTATGCAAAGCAAGGAAACTTGAAACTGCTTGGGAGCTATTTGAAAAACTATCTCAGGAAGGGCTTCAACCAGATGTTGTGACATATTGCATTATGATCAATGGATTTTGTAAAAACGGACAAGTAGATAATGCAAATATTTTATTTCAAATGATGGAAGAAAATGGTTGTACTCCTAACTTACTTACTTATAGCGCCTTGTTGCATGGTTTCTACAAAAATAATAAATTAGAGGAGGTGGTTAAACTCCTCCATAAGATGATTCAAAAGGATGTGTCACTAGCTGCTAGCATTTACACTATAGTTGAAGACATGGTTTCCAAAGATGAAAAATGTCGAGAATGGCTAGACATACTTCAAAGGTTTCCTGTCCAAAAGCATCCATCTTGA

Protein sequence

MTFKANSVASASSIVAISSKAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQHGLPMFIHNCKKGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQRFPVQKHPS*

Homology

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BLAST of CsaV3_7G022260 vs. NCBI nr
Match: XP_031744953.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X1 [Cucumis sativus] >KAE8646080.1 hypothetical protein Csa_015913 [Cucumis sativus])

HSP 1 Score: 1041.6 bits (2692), Expect = 2.3e-300
Identity = 513/513 (100.00%), Postives = 513/513 (100.00%), Query Frame = 0


Query: 1   MTFKANSVASASSIVAISSKAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQ 60
           MTFKANSVASASSIVAISSKAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQ
Sbjct: 1   MTFKANSVASASSIVAISSKAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQ 60

Query: 61  HGLPMFIHNCKKGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGC 120
           HGLPMFIHNCKKGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGC
Sbjct: 61  HGLPMFIHNCKKGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGC 120

Query: 121 WPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGK 180
           WPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGK
Sbjct: 121 WPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGK 180

Query: 181 WKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTS 240
           WKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTS
Sbjct: 181 WKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTS 240

Query: 241 LIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVG 300
           LIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVG
Sbjct: 241 LIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVG 300

Query: 301 KWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAM 360
           KWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAM
Sbjct: 301 KWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAM 360

Query: 361 ELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGF 420
           ELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGF
Sbjct: 361 ELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGF 420

Query: 421 CKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAA 480
           CKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAA
Sbjct: 421 CKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAA 480

Query: 481 SIYTIVEDMVSKDEKCREWLDILQRFPVQKHPS 514
           SIYTIVEDMVSKDEKCREWLDILQRFPVQKHPS
Sbjct: 481 SIYTIVEDMVSKDEKCREWLDILQRFPVQKHPS 513

[Close]

BLAST of CsaV3_7G022260 vs. NCBI nr
Match: XP_008447178.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 968.4 bits (2502), Expect = 2.5e-278
Identity = 478/514 (93.00%), Postives = 493/514 (95.91%), Query Frame = 0


Query: 1   MTFKANSVASASSIVAISSKAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQ 60
           M FK N+VASASSIVAISSKAK+ SSLFTHSPTIPSSNPQI SANHPKSLHALSER+SLQ
Sbjct: 1   MAFKTNTVASASSIVAISSKAKILSSLFTHSPTIPSSNPQIFSANHPKSLHALSERMSLQ 60

Query: 61  HGLPMFIHNCKK---GLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQK 120
           HGLPMFIHNCKK    LSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEAT+LF+RM K
Sbjct: 61  HGLPMFIHNCKKVREALSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATKLFMRMPK 120

Query: 121 LGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCK 180
           LGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNI SYNIIIDELCK
Sbjct: 121 LGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIVSYNIIIDELCK 180

Query: 181 IGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFT 240
           IGKWKEAKRLFNEMVDQGVRPDVVTFSALID LCKEGMVIEAKKFLETMMLRGIVPDLFT
Sbjct: 181 IGKWKEAKRLFNEMVDQGVRPDVVTFSALIDMLCKEGMVIEAKKFLETMMLRGIVPDLFT 240

Query: 241 FTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEML 300
           +TSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKT N+EEAMKLY +ML
Sbjct: 241 YTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTLNMEEAMKLYYKML 300

Query: 301 RVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLF 360
            VGKWPDMKTF VLLKGLFLAGKV DAKKLFGV+KP+AVP+NLYIC VFLDGLCKNGCLF
Sbjct: 301 HVGKWPDMKTFSVLLKGLFLAGKVCDAKKLFGVIKPYAVPENLYICGVFLDGLCKNGCLF 360

Query: 361 EAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMI 420
           EAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMI
Sbjct: 361 EAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMI 420

Query: 421 NGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVS 480
           NGFCK+GQVDNANILFQMMEENGCTPNL TY AL+HGFYKNNKLEEVV+LLHKMIQKDVS
Sbjct: 421 NGFCKDGQVDNANILFQMMEENGCTPNLHTYHALMHGFYKNNKLEEVVQLLHKMIQKDVS 480

Query: 481 LAASIYTIVEDMVSKDEKCREWLDILQRFPVQKH 512
           LAA IYTIVEDMVSKDE+ REWLDILQRFPVQKH
Sbjct: 481 LAAGIYTIVEDMVSKDERYREWLDILQRFPVQKH 514

[Close]

BLAST of CsaV3_7G022260 vs. NCBI nr
Match: KAA0041913.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK17845.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 942.6 bits (2435), Expect = 1.4e-270
Identity = 478/583 (81.99%), Postives = 494/583 (84.73%), Query Frame = 0


Query: 1   MTFKANSVASASSIVAISSKAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQ 60
           M FK N+VASASSIVAISSKAK+ SSLFTHSP+IPSSNPQI SANHPKSLHALSER+SLQ
Sbjct: 1   MAFKTNTVASASSIVAISSKAKILSSLFTHSPSIPSSNPQIFSANHPKSLHALSERMSLQ 60

Query: 61  HGLPMFIHNCKKG----------------------------------------------- 120
           HGLPMFIHNCKKG                                               
Sbjct: 61  HGLPMFIHNCKKGNITATQALQFFHLMMRSIISFNLLLGALAKIKHYSQVFSLYKKMHLA 120

Query: 121 -------------------------LSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA 180
                                    LSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA
Sbjct: 121 GLSPNFFTLSILINCLCNVNRVREALSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA 180

Query: 181 TRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSY 240
           T+LF+RM KLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNI SY
Sbjct: 181 TKLFMRMPKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIVSY 240

Query: 241 NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMML 300
           NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALID LCKEGMVIEAKKFLETMML
Sbjct: 241 NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDMLCKEGMVIEAKKFLETMML 300

Query: 301 RGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEE 360
           RGIVPDLFT+TSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKT N+EE
Sbjct: 301 RGIVPDLFTYTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTLNMEE 360

Query: 361 AMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLD 420
           AMKLY +ML VGKWPDMKTF VLLKGLFLAGKV DAKKLFGV+KP+AVP+NLYIC VFLD
Sbjct: 361 AMKLYYKMLHVGKWPDMKTFSVLLKGLFLAGKVCDAKKLFGVIKPYAVPENLYICGVFLD 420

Query: 421 GLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP 480
           GLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP
Sbjct: 421 GLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP 480

Query: 481 DVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLL 512
           DVVTYCIMINGFCK+GQVDNANILFQMMEENGCTPNL TY AL+HGFYKNNKLEEVV+LL
Sbjct: 481 DVVTYCIMINGFCKDGQVDNANILFQMMEENGCTPNLHTYHALMHGFYKNNKLEEVVQLL 540

[Close]

BLAST of CsaV3_7G022260 vs. NCBI nr
Match: XP_031744954.1 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 901.7 bits (2329), Expect = 2.8e-258
Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0


Query: 77  MAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCR 136
           MAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCR
Sbjct: 1   MAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCR 60

Query: 137 TGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGV 196
           TGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGV
Sbjct: 61  TGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGV 120

Query: 197 RPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKE 256
           RPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKE
Sbjct: 121 RPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKE 180

Query: 257 LFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLF 316
           LFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLF
Sbjct: 181 LFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLF 240

Query: 317 LAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIE 376
           LAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIE
Sbjct: 241 LAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIE 300

Query: 377 SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMM 436
           SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMM
Sbjct: 301 SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMM 360

Query: 437 EENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKC 496
           EENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKC
Sbjct: 361 EENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKC 420

Query: 497 REWLDILQRFPVQKHPS 514
           REWLDILQRFPVQKHPS
Sbjct: 421 REWLDILQRFPVQKHPS 437

[Close]

BLAST of CsaV3_7G022260 vs. NCBI nr
Match: XP_008447180.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 847.4 bits (2188), Expect = 6.3e-242
Identity = 410/435 (94.25%), Postives = 422/435 (97.01%), Query Frame = 0


Query: 77  MAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCR 136
           MAGIMRRGYIPDVVTYTSLIKGLCMEHRISEAT+LF+RM KLGCWPNVVTYGTLIKGLCR
Sbjct: 1   MAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATKLFMRMPKLGCWPNVVTYGTLIKGLCR 60

Query: 137 TGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGV 196
           TGNINLALKLHQEMLNGTSPYAINCKPNI SYNIIIDELCKIGKWKEAKRLFNEMVDQGV
Sbjct: 61  TGNINLALKLHQEMLNGTSPYAINCKPNIVSYNIIIDELCKIGKWKEAKRLFNEMVDQGV 120

Query: 197 RPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKE 256
           RPDVVTFSALID LCKEGMVIEAKKFLETMMLRGIVPDLFT+TSLIEGFCLVGDLDSAKE
Sbjct: 121 RPDVVTFSALIDMLCKEGMVIEAKKFLETMMLRGIVPDLFTYTSLIEGFCLVGDLDSAKE 180

Query: 257 LFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLF 316
           LFLSMPSKGYEPDVISYTVLIYGYCKT N+EEAMKLY +ML VGKWPDMKTF VLLKGLF
Sbjct: 181 LFLSMPSKGYEPDVISYTVLIYGYCKTLNMEEAMKLYYKMLHVGKWPDMKTFSVLLKGLF 240

Query: 317 LAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIE 376
           LAGKV DAKKLFGV+KP+AVP+NLYIC VFLDGLCKNGCLFEAMELFNELKSYNMKLDIE
Sbjct: 241 LAGKVCDAKKLFGVIKPYAVPENLYICGVFLDGLCKNGCLFEAMELFNELKSYNMKLDIE 300

Query: 377 SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMM 436
           SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCK+GQVDNANILFQMM
Sbjct: 301 SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKDGQVDNANILFQMM 360

Query: 437 EENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKC 496
           EENGCTPNL TY AL+HGFYKNNKLEEVV+LLHKMIQKDVSLAA IYTIVEDMVSKDE+ 
Sbjct: 361 EENGCTPNLHTYHALMHGFYKNNKLEEVVQLLHKMIQKDVSLAAGIYTIVEDMVSKDERY 420

Query: 497 REWLDILQRFPVQKH 512
           REWLDILQRFPVQKH
Sbjct: 421 REWLDILQRFPVQKH 435

[Close]

BLAST of CsaV3_7G022260 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.6e-86
Identity = 175/452 (38.72%), Postives = 260/452 (57.52%), Query Frame = 0


Query: 87  PDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKL 146
           PD+VT ++LI GLC++ R+SEA  L  RM + G  P+ VTYG ++  LC++GN  LAL L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232

Query: 147 HQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR--------- 206
            ++M         N K ++  Y+I+ID LCK G + +A  LFNEM  +G++         
Sbjct: 233 FRKMEER------NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 292

Query: 207 --------------------------PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGI 266
                                     PDVVTFSALID   KEG ++EAK+    M+ RGI
Sbjct: 293 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 352

Query: 267 VPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMK 326
            PD  T+ SLI+GFC    L  A ++F  M SKG EPD+++Y++LI  YCK   V++ M+
Sbjct: 353 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 412

Query: 327 LYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLC 386
           L+ E+   G  P+  T+  L+ G   +GK+  AK+LF  +    VP ++    + LDGLC
Sbjct: 413 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 472

Query: 387 KNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVV 446
            NG L +A+E+F +++   M L I  +N +I G+C A K++ AW LF  LS +G++PDVV
Sbjct: 473 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 532

Query: 447 TYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKM 504
           TY +MI G CK G +  A++LF+ M+E+GCTP+  TY+ L+      + L   V+L+ +M
Sbjct: 533 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 592

[Close]

BLAST of CsaV3_7G022260 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 3.5e-86
Identity = 171/453 (37.75%), Postives = 270/453 (59.60%), Query Frame = 0


Query: 80  IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN 139
           ++  GY PD  T+T+LI GL + ++ SEA  L  +M + GC P++VTYGT++ GLC+ G+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238

Query: 140 INLALKLHQEM---------------LNGTSPY-----AIN---------CKPNIFSYNI 199
           I+LAL L ++M               ++G   Y     A+N          +P++F+Y+ 
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298

Query: 200 IIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRG 259
           +I  LC  G+W +A RL ++M+++ + P+VVTFSALID   KEG ++EA+K  + M+ R 
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358

Query: 260 IVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAM 319
           I PD+FT++SLI GFC+   LD AK +F  M SK   P+V++Y+ LI G+CK   VEE M
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418

Query: 320 KLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGL 379
           +L+ EM + G   +  T+  L+ G F A    +A+ +F  +    V  N+   ++ LDGL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478

Query: 380 CKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDV 439
           CKNG L +AM +F  L+   M+ DI ++N +I+G+CKA K+E  WELF  LS +G+ P+V
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538

Query: 440 VTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHK 499
           + Y  MI+GFC+ G  + A+ L + M+E+G  PN  TY+ L+    ++   E   +L+ +
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598

Query: 500 MIQKDVSLAASIYTIVEDMVSKDEKCREWLDIL 504
           M     +  AS   +V +M+      + +LD+L
Sbjct: 599 MRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631

[Close]

BLAST of CsaV3_7G022260 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 315.5 bits (807), Expect = 1.1e-84
Identity = 169/449 (37.64%), Postives = 263/449 (58.57%), Query Frame = 0


Query: 84  GYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLA 143
           GY P+ VT+ +LI GL + ++ SEA  L  RM   GC P++VTYG ++ GLC+ G+ +LA
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 144 LKLHQEM---------------LNGTSPY-----AIN---------CKPNIFSYNIIIDE 203
             L  +M               ++G   Y     A+N          +PN+ +Y+ +I  
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 204 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPD 263
           LC  G+W +A RL ++M+++ + PDV TFSALID   KEG ++EA+K  + M+ R I P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 264 LFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYN 323
           + T++SLI GFC+   LD AK++F  M SK   PDV++Y  LI G+CK   VEE M+++ 
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420

Query: 324 EMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNG 383
           EM + G   +  T+ +L++GLF AG    A+++F  +    VP N+   +  LDGLCKNG
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 384 CLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYC 443
            L +AM +F  L+   M+  I ++N +I+G+CKA K+E  W+LF  LS +G++PDVV Y 
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540

Query: 444 IMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQK 503
            MI+GFC+ G  + A+ LF+ M+E+G  PN   Y+ L+    ++   E   +L+ +M   
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600

[Close]

BLAST of CsaV3_7G022260 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 314.7 bits (805), Expect = 1.9e-84
Identity = 168/448 (37.50%), Postives = 262/448 (58.48%), Query Frame = 0


Query: 85  YIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLAL 144
           Y P+ VT+ +LI GL + ++ SEA  L  RM   GC P++ TYGT++ GLC+ G+I+LAL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 145 KLHQEMLNG-----------------------------TSPYAINCKPNIFSYNIIIDEL 204
            L ++M  G                             T       +PN+ +YN +I  L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 205 CKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDL 264
           C  G+W +A RL ++M+++ + P+VVTFSALID   KEG ++EA+K  + M+ R I PD+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 265 FTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNE 324
           FT++SLI GFC+   LD AK +F  M SK   P+V++Y  LI G+CK   VEE M+L+ E
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 325 MLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGC 384
           M + G   +  T+  L++GLF AG    A+K+F  +    VP ++   S+ LDGLCK G 
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480

Query: 385 LFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCI 444
           L +A+ +F  L+   M+ DI ++N +I+G+CKA K+E  W+LF  LS +G++P+V+ Y  
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540

Query: 445 MINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKD 504
           MI+GFC+ G  + A+ LF+ M+E+G  PN  TY+ L+    ++       +L+ +M    
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600

[Close]

BLAST of CsaV3_7G022260 vs. ExPASy Swiss-Prot
Match: Q9SXD8 (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX=3702 GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.1e-83
Identity = 164/453 (36.20%), Postives = 263/453 (58.06%), Query Frame = 0


Query: 80  IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN 139
           ++  GY PD +T+T+LI GL + ++ SEA  L  RM + GC PN+VTYG ++ GLC+ G+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240

Query: 140 INLALKLHQEM---------------LNGTSPY-----AIN---------CKPNIFSYNI 199
            +LAL L  +M               ++    Y     A+N          +PN+ +Y+ 
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300

Query: 200 IIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRG 259
           +I  LC  G+W +A +L ++M+++ + P++VTF+ALID   KEG  +EA+K  + M+ R 
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360

Query: 260 IVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAM 319
           I PD+FT+ SL+ GFC+   LD AK++F  M SK   PDV++Y  LI G+CK+  VE+  
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420

Query: 320 KLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGL 379
           +L+ EM   G   D  T+  L++GLF  G   +A+K+F  +    VP ++   S+ LDGL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480

Query: 380 CKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDV 439
           C NG L +A+E+F+ ++   +KLDI  +  +I+G+CKA K++  W+LF  LS +G++P+V
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540

Query: 440 VTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHK 499
           VTY  MI+G C    +  A  L + M+E+G  PN  TY+ L+    ++       +L+ +
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 600

Query: 500 MIQKDVSLAASIYTIVEDMVSKDEKCREWLDIL 504
           M        AS   +V +M+      + +LD+L
Sbjct: 601 MRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 633

[Close]

BLAST of CsaV3_7G022260 vs. ExPASy TrEMBL
Match: A0A0A0K7C1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G230920 PE=4 SV=1)

HSP 1 Score: 991.1 bits (2561), Expect = 1.7e-285
Identity = 505/577 (87.52%), Postives = 505/577 (87.52%), Query Frame = 0


Query: 1   MTFKANSVASASSIVAISSKAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQ 60
           MTFKANSVASASSIVAISSKAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQ
Sbjct: 1   MTFKANSVASASSIVAISSKAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQ 60

Query: 61  HGLPMFIHNCKK------------------------------------------------ 120
           HGLPMFIHNCKK                                                
Sbjct: 61  HGLPMFIHNCKKGNITSTQALQFFDLMMRSIISFNLLLGALAKIKHYSQVFSLYKKMHLA 120

Query: 121 ------------------------GLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA 180
                                   GLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA
Sbjct: 121 GLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA 180

Query: 181 TRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSY 240
           TRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSY
Sbjct: 181 TRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSY 240

Query: 241 NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMML 300
           NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMML
Sbjct: 241 NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMML 300

Query: 301 RGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEE 360
           RGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEE
Sbjct: 301 RGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEE 360

Query: 361 AMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLD 420
           AMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLD
Sbjct: 361 AMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLD 420

Query: 421 GLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP 480
           GLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP
Sbjct: 421 GLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP 480

Query: 481 DVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLL 506
           DVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLL
Sbjct: 481 DVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLL 540

[Close]

BLAST of CsaV3_7G022260 vs. ExPASy TrEMBL
Match: A0A1S3BHF7 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489690 PE=4 SV=1)

HSP 1 Score: 968.4 bits (2502), Expect = 1.2e-278
Identity = 478/514 (93.00%), Postives = 493/514 (95.91%), Query Frame = 0


Query: 1   MTFKANSVASASSIVAISSKAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQ 60
           M FK N+VASASSIVAISSKAK+ SSLFTHSPTIPSSNPQI SANHPKSLHALSER+SLQ
Sbjct: 1   MAFKTNTVASASSIVAISSKAKILSSLFTHSPTIPSSNPQIFSANHPKSLHALSERMSLQ 60

Query: 61  HGLPMFIHNCKK---GLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQK 120
           HGLPMFIHNCKK    LSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEAT+LF+RM K
Sbjct: 61  HGLPMFIHNCKKVREALSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATKLFMRMPK 120

Query: 121 LGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCK 180
           LGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNI SYNIIIDELCK
Sbjct: 121 LGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIVSYNIIIDELCK 180

Query: 181 IGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFT 240
           IGKWKEAKRLFNEMVDQGVRPDVVTFSALID LCKEGMVIEAKKFLETMMLRGIVPDLFT
Sbjct: 181 IGKWKEAKRLFNEMVDQGVRPDVVTFSALIDMLCKEGMVIEAKKFLETMMLRGIVPDLFT 240

Query: 241 FTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEML 300
           +TSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKT N+EEAMKLY +ML
Sbjct: 241 YTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTLNMEEAMKLYYKML 300

Query: 301 RVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLF 360
            VGKWPDMKTF VLLKGLFLAGKV DAKKLFGV+KP+AVP+NLYIC VFLDGLCKNGCLF
Sbjct: 301 HVGKWPDMKTFSVLLKGLFLAGKVCDAKKLFGVIKPYAVPENLYICGVFLDGLCKNGCLF 360

Query: 361 EAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMI 420
           EAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMI
Sbjct: 361 EAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMI 420

Query: 421 NGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVS 480
           NGFCK+GQVDNANILFQMMEENGCTPNL TY AL+HGFYKNNKLEEVV+LLHKMIQKDVS
Sbjct: 421 NGFCKDGQVDNANILFQMMEENGCTPNLHTYHALMHGFYKNNKLEEVVQLLHKMIQKDVS 480

Query: 481 LAASIYTIVEDMVSKDEKCREWLDILQRFPVQKH 512
           LAA IYTIVEDMVSKDE+ REWLDILQRFPVQKH
Sbjct: 481 LAAGIYTIVEDMVSKDERYREWLDILQRFPVQKH 514

[Close]

BLAST of CsaV3_7G022260 vs. ExPASy TrEMBL
Match: A0A5A7TFD7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001070 PE=4 SV=1)

HSP 1 Score: 942.6 bits (2435), Expect = 7.0e-271
Identity = 478/583 (81.99%), Postives = 494/583 (84.73%), Query Frame = 0


Query: 1   MTFKANSVASASSIVAISSKAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQ 60
           M FK N+VASASSIVAISSKAK+ SSLFTHSP+IPSSNPQI SANHPKSLHALSER+SLQ
Sbjct: 1   MAFKTNTVASASSIVAISSKAKILSSLFTHSPSIPSSNPQIFSANHPKSLHALSERMSLQ 60

Query: 61  HGLPMFIHNCKKG----------------------------------------------- 120
           HGLPMFIHNCKKG                                               
Sbjct: 61  HGLPMFIHNCKKGNITATQALQFFHLMMRSIISFNLLLGALAKIKHYSQVFSLYKKMHLA 120

Query: 121 -------------------------LSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA 180
                                    LSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA
Sbjct: 121 GLSPNFFTLSILINCLCNVNRVREALSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA 180

Query: 181 TRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSY 240
           T+LF+RM KLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNI SY
Sbjct: 181 TKLFMRMPKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIVSY 240

Query: 241 NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMML 300
           NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALID LCKEGMVIEAKKFLETMML
Sbjct: 241 NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDMLCKEGMVIEAKKFLETMML 300

Query: 301 RGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEE 360
           RGIVPDLFT+TSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKT N+EE
Sbjct: 301 RGIVPDLFTYTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTLNMEE 360

Query: 361 AMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLD 420
           AMKLY +ML VGKWPDMKTF VLLKGLFLAGKV DAKKLFGV+KP+AVP+NLYIC VFLD
Sbjct: 361 AMKLYYKMLHVGKWPDMKTFSVLLKGLFLAGKVCDAKKLFGVIKPYAVPENLYICGVFLD 420

Query: 421 GLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP 480
           GLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP
Sbjct: 421 GLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP 480

Query: 481 DVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLL 512
           DVVTYCIMINGFCK+GQVDNANILFQMMEENGCTPNL TY AL+HGFYKNNKLEEVV+LL
Sbjct: 481 DVVTYCIMINGFCKDGQVDNANILFQMMEENGCTPNLHTYHALMHGFYKNNKLEEVVQLL 540

[Close]

BLAST of CsaV3_7G022260 vs. ExPASy TrEMBL
Match: A0A1S3BHP4 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489690 PE=4 SV=1)

HSP 1 Score: 847.4 bits (2188), Expect = 3.1e-242
Identity = 410/435 (94.25%), Postives = 422/435 (97.01%), Query Frame = 0


Query: 77  MAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCR 136
           MAGIMRRGYIPDVVTYTSLIKGLCMEHRISEAT+LF+RM KLGCWPNVVTYGTLIKGLCR
Sbjct: 1   MAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATKLFMRMPKLGCWPNVVTYGTLIKGLCR 60

Query: 137 TGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGV 196
           TGNINLALKLHQEMLNGTSPYAINCKPNI SYNIIIDELCKIGKWKEAKRLFNEMVDQGV
Sbjct: 61  TGNINLALKLHQEMLNGTSPYAINCKPNIVSYNIIIDELCKIGKWKEAKRLFNEMVDQGV 120

Query: 197 RPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKE 256
           RPDVVTFSALID LCKEGMVIEAKKFLETMMLRGIVPDLFT+TSLIEGFCLVGDLDSAKE
Sbjct: 121 RPDVVTFSALIDMLCKEGMVIEAKKFLETMMLRGIVPDLFTYTSLIEGFCLVGDLDSAKE 180

Query: 257 LFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLF 316
           LFLSMPSKGYEPDVISYTVLIYGYCKT N+EEAMKLY +ML VGKWPDMKTF VLLKGLF
Sbjct: 181 LFLSMPSKGYEPDVISYTVLIYGYCKTLNMEEAMKLYYKMLHVGKWPDMKTFSVLLKGLF 240

Query: 317 LAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIE 376
           LAGKV DAKKLFGV+KP+AVP+NLYIC VFLDGLCKNGCLFEAMELFNELKSYNMKLDIE
Sbjct: 241 LAGKVCDAKKLFGVIKPYAVPENLYICGVFLDGLCKNGCLFEAMELFNELKSYNMKLDIE 300

Query: 377 SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMM 436
           SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCK+GQVDNANILFQMM
Sbjct: 301 SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKDGQVDNANILFQMM 360

Query: 437 EENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKC 496
           EENGCTPNL TY AL+HGFYKNNKLEEVV+LLHKMIQKDVSLAA IYTIVEDMVSKDE+ 
Sbjct: 361 EENGCTPNLHTYHALMHGFYKNNKLEEVVQLLHKMIQKDVSLAAGIYTIVEDMVSKDERY 420

Query: 497 REWLDILQRFPVQKH 512
           REWLDILQRFPVQKH
Sbjct: 421 REWLDILQRFPVQKH 435

[Close]

BLAST of CsaV3_7G022260 vs. ExPASy TrEMBL
Match: A0A5A7TFJ3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001980 PE=4 SV=1)

HSP 1 Score: 767.7 bits (1981), Expect = 3.1e-218
Identity = 387/583 (66.38%), Postives = 445/583 (76.33%), Query Frame = 0


Query: 1   MTFKANSVASASSIVAISSKAKLFSSLFTHSPTIPSSNPQISSANHPKSLHALSERISLQ 60
           M FK N+V+SA+S VAISS+AKLFSSLFTHSP +PSSNPQISSAN+ KSLHA  ER S Q
Sbjct: 1   MAFKTNTVSSATSAVAISSEAKLFSSLFTHSPPVPSSNPQISSANNSKSLHASPERNSFQ 60

Query: 61  HGLPMFIHNCK------------------------------------------------- 120
           HG+PMF+H CK                                                 
Sbjct: 61  HGIPMFLHKCKTGSISVTQAHQFFDLMMRSIFSFNRLLAGLAKIEHYSQVFSLYKEMHLA 120

Query: 121 -----------------------KGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEA 180
                                  +GL+AMAGIMRRGYIPD VT+T+LIKGLC++HRI EA
Sbjct: 121 GLSPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDEVTFTTLIKGLCVQHRIIEA 180

Query: 181 TRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSY 240
           T+LF+RMQKLGC PNVVTYGTLIKGLC  GNINLALK HQEMLN TSPY  NC+PN+ SY
Sbjct: 181 TKLFMRMQKLGCTPNVVTYGTLIKGLCAIGNINLALKWHQEMLNDTSPYVFNCRPNVISY 240

Query: 241 NIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMML 300
           +IIID LCK+G W+EA  LFNEMVDQGV+P+VVTFS LID LCKEG VIEAKK LE M+ 
Sbjct: 241 SIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIEAKKLLEMMIQ 300

Query: 301 RGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEE 360
            GIVP+LFT+TSLI+GFCL GDL+SAKELF+SMPSKGYEPDVISY +LI GYCKT  VEE
Sbjct: 301 IGIVPNLFTYTSLIKGFCLAGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEE 360

Query: 361 AMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLD 420
           AMKLY+EML VG WPDMKT  VLLK LFLAGKV DAK+LF V+KP+A+P++L IC +FLD
Sbjct: 361 AMKLYSEMLHVGMWPDMKTSGVLLKALFLAGKVNDAKELFRVIKPYAIPEDLCICCIFLD 420

Query: 421 GLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP 480
           GLCKNGC FEAM+LFNELKSYNMKLDIE+F CLIDGLCKA KLETAWELF+KLS+EG+QP
Sbjct: 421 GLCKNGCFFEAMKLFNELKSYNMKLDIETFGCLIDGLCKAGKLETAWELFDKLSKEGIQP 480

Query: 481 DVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLL 512
           D + Y  MI+GFCK GQVD ANILFQ MEENGC+P+L+TYS L+ GF+++NKLE+VV+LL
Sbjct: 481 DAMAYTSMIHGFCKEGQVDKANILFQKMEENGCSPDLITYSILMRGFFESNKLEKVVQLL 540

[Close]

BLAST of CsaV3_7G022260 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 321.6 bits (823), Expect = 1.1e-87
Identity = 175/452 (38.72%), Postives = 260/452 (57.52%), Query Frame = 0


Query: 87  PDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKL 146
           PD+VT ++LI GLC++ R+SEA  L  RM + G  P+ VTYG ++  LC++GN  LAL L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232

Query: 147 HQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR--------- 206
            ++M         N K ++  Y+I+ID LCK G + +A  LFNEM  +G++         
Sbjct: 233 FRKMEER------NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 292

Query: 207 --------------------------PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGI 266
                                     PDVVTFSALID   KEG ++EAK+    M+ RGI
Sbjct: 293 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 352

Query: 267 VPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMK 326
            PD  T+ SLI+GFC    L  A ++F  M SKG EPD+++Y++LI  YCK   V++ M+
Sbjct: 353 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 412

Query: 327 LYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLC 386
           L+ E+   G  P+  T+  L+ G   +GK+  AK+LF  +    VP ++    + LDGLC
Sbjct: 413 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 472

Query: 387 KNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVV 446
            NG L +A+E+F +++   M L I  +N +I G+C A K++ AW LF  LS +G++PDVV
Sbjct: 473 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 532

Query: 447 TYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKM 504
           TY +MI G CK G +  A++LF+ M+E+GCTP+  TY+ L+      + L   V+L+ +M
Sbjct: 533 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 592

[Close]

BLAST of CsaV3_7G022260 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 320.5 bits (820), Expect = 2.5e-87
Identity = 171/453 (37.75%), Postives = 270/453 (59.60%), Query Frame = 0


Query: 80  IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN 139
           ++  GY PD  T+T+LI GL + ++ SEA  L  +M + GC P++VTYGT++ GLC+ G+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238

Query: 140 INLALKLHQEM---------------LNGTSPY-----AIN---------CKPNIFSYNI 199
           I+LAL L ++M               ++G   Y     A+N          +P++F+Y+ 
Sbjct: 239 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS 298

Query: 200 IIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRG 259
           +I  LC  G+W +A RL ++M+++ + P+VVTFSALID   KEG ++EA+K  + M+ R 
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358

Query: 260 IVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAM 319
           I PD+FT++SLI GFC+   LD AK +F  M SK   P+V++Y+ LI G+CK   VEE M
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418

Query: 320 KLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGL 379
           +L+ EM + G   +  T+  L+ G F A    +A+ +F  +    V  N+   ++ LDGL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478

Query: 380 CKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDV 439
           CKNG L +AM +F  L+   M+ DI ++N +I+G+CKA K+E  WELF  LS +G+ P+V
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNV 538

Query: 440 VTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHK 499
           + Y  MI+GFC+ G  + A+ L + M+E+G  PN  TY+ L+    ++   E   +L+ +
Sbjct: 539 IAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE 598

Query: 500 MIQKDVSLAASIYTIVEDMVSKDEKCREWLDIL 504
           M     +  AS   +V +M+      + +LD+L
Sbjct: 599 MRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631

[Close]

BLAST of CsaV3_7G022260 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 315.5 bits (807), Expect = 8.1e-86
Identity = 169/449 (37.64%), Postives = 263/449 (58.57%), Query Frame = 0


Query: 84  GYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLA 143
           GY P+ VT+ +LI GL + ++ SEA  L  RM   GC P++VTYG ++ GLC+ G+ +LA
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 144 LKLHQEM---------------LNGTSPY-----AIN---------CKPNIFSYNIIIDE 203
             L  +M               ++G   Y     A+N          +PN+ +Y+ +I  
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 204 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPD 263
           LC  G+W +A RL ++M+++ + PDV TFSALID   KEG ++EA+K  + M+ R I P 
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 264 LFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYN 323
           + T++SLI GFC+   LD AK++F  M SK   PDV++Y  LI G+CK   VEE M+++ 
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420

Query: 324 EMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNG 383
           EM + G   +  T+ +L++GLF AG    A+++F  +    VP N+   +  LDGLCKNG
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 480

Query: 384 CLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYC 443
            L +AM +F  L+   M+  I ++N +I+G+CKA K+E  W+LF  LS +G++PDVV Y 
Sbjct: 481 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540

Query: 444 IMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQK 503
            MI+GFC+ G  + A+ LF+ M+E+G  PN   Y+ L+    ++   E   +L+ +M   
Sbjct: 541 TMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600

[Close]

BLAST of CsaV3_7G022260 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 314.7 bits (805), Expect = 1.4e-85
Identity = 168/448 (37.50%), Postives = 262/448 (58.48%), Query Frame = 0


Query: 85  YIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLAL 144
           Y P+ VT+ +LI GL + ++ SEA  L  RM   GC P++ TYGT++ GLC+ G+I+LAL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 145 KLHQEMLNG-----------------------------TSPYAINCKPNIFSYNIIIDEL 204
            L ++M  G                             T       +PN+ +YN +I  L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 205 CKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDL 264
           C  G+W +A RL ++M+++ + P+VVTFSALID   KEG ++EA+K  + M+ R I PD+
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 265 FTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNE 324
           FT++SLI GFC+   LD AK +F  M SK   P+V++Y  LI G+CK   VEE M+L+ E
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 325 MLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGC 384
           M + G   +  T+  L++GLF AG    A+K+F  +    VP ++   S+ LDGLCK G 
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480

Query: 385 LFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCI 444
           L +A+ +F  L+   M+ DI ++N +I+G+CKA K+E  W+LF  LS +G++P+V+ Y  
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540

Query: 445 MINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKD 504
           MI+GFC+ G  + A+ LF+ M+E+G  PN  TY+ L+    ++       +L+ +M    
Sbjct: 541 MISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCG 600

[Close]

BLAST of CsaV3_7G022260 vs. TAIR 10
Match: AT1G62590.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 311.2 bits (796), Expect = 1.5e-84
Identity = 164/453 (36.20%), Postives = 263/453 (58.06%), Query Frame = 0


Query: 80  IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN 139
           ++  GY PD +T+T+LI GL + ++ SEA  L  RM + GC PN+VTYG ++ GLC+ G+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240

Query: 140 INLALKLHQEM---------------LNGTSPY-----AIN---------CKPNIFSYNI 199
            +LAL L  +M               ++    Y     A+N          +PN+ +Y+ 
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300

Query: 200 IIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRG 259
           +I  LC  G+W +A +L ++M+++ + P++VTF+ALID   KEG  +EA+K  + M+ R 
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360

Query: 260 IVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAM 319
           I PD+FT+ SL+ GFC+   LD AK++F  M SK   PDV++Y  LI G+CK+  VE+  
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420

Query: 320 KLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGL 379
           +L+ EM   G   D  T+  L++GLF  G   +A+K+F  +    VP ++   S+ LDGL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480

Query: 380 CKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDV 439
           C NG L +A+E+F+ ++   +KLDI  +  +I+G+CKA K++  W+LF  LS +G++P+V
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540

Query: 440 VTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHK 499
           VTY  MI+G C    +  A  L + M+E+G  PN  TY+ L+    ++       +L+ +
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE 600

Query: 500 MIQKDVSLAASIYTIVEDMVSKDEKCREWLDIL 504
           M        AS   +V +M+      + +LD+L
Sbjct: 601 MRSCRFVGDASTIGLVANMLHDGRLDKSFLDML 633

The following BLAST results are available for this feature:

BLAST of CsaV3_7G022260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744953.1	2.3e-300	100.00	pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X1 ...	[more]
XP_008447178.1	2.5e-278	93.00	PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-...	[more]
KAA0041913.1	1.4e-270	81.99	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK17845...	[more]
XP_031744954.1	2.8e-258	100.00	pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X2 ...	[more]
XP_008447180.1	6.3e-242	94.25	PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-...	[more]

BLAST of CsaV3_7G022260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQ83	1.6e-86	38.72	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]
Q9LQ16	3.5e-86	37.75	Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX...	[more]
Q9SXD1	1.1e-84	37.64	Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop...	[more]
Q9LQ14	1.9e-84	37.50	Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop...	[more]
Q9SXD8	2.1e-83	36.20	Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsaV3_7G022260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7C1	1.7e-285	87.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G230920 PE=4 SV=1	[more]
A0A1S3BHF7	1.2e-278	93.00	pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like isofor...	[more]
A0A5A7TFD7	7.0e-271	81.99	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BHP4	3.1e-242	94.25	pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like isofor...	[more]
A0A5A7TFJ3	3.1e-218	66.38	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of CsaV3_7G022260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22470.1	1.1e-87	38.72	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G62910.1	2.5e-87	37.75	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G62670.1	8.1e-86	37.64	rna processing factor 2	[more]
AT1G62930.1	1.4e-85	37.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62590.1	1.5e-84	36.20	pentatricopeptide (PPR) repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 374..422 e-value: 5.1E-18 score: 65.0 coord: 163..212 e-value: 1.4E-18 score: 66.9 coord: 268..315 e-value: 8.3E-14 score: 51.5 coord: 87..136 e-value: 2.3E-17 score: 62.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 377..410 e-value: 2.8E-9 score: 34.6 coord: 447..477 e-value: 4.2E-5 score: 21.5 coord: 411..444 e-value: 3.1E-9 score: 34.5 coord: 90..123 e-value: 1.4E-6 score: 26.1 coord: 166..200 e-value: 1.9E-10 score: 38.3 coord: 201..234 e-value: 4.4E-8 score: 30.8 coord: 271..299 e-value: 2.2E-7 score: 28.6 coord: 341..374 e-value: 6.0E-6 score: 24.1 coord: 236..270 e-value: 1.8E-7 score: 28.9 coord: 125..151 e-value: 2.2E-6 score: 25.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 343..370 e-value: 3.8E-5 score: 23.6
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 229..261 e-value: 2.2E-10 score: 40.1 coord: 439..471 e-value: 3.6E-6 score: 26.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 409..443 score: 13.635915
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 234..268 score: 12.397287
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 269..303 score: 11.925952
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 199..233 score: 12.232868
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 123..153 score: 10.468099
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 88..122 score: 12.342482
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 339..373 score: 9.700809
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 444..478 score: 10.522905
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 374..408 score: 13.08785
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 164..198 score: 14.052444
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 320..508 e-value: 2.3E-46 score: 160.6 coord: 157..231 e-value: 1.0E-22 score: 82.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 41..153 e-value: 1.2E-24 score: 88.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 232..319 e-value: 8.7E-27 score: 95.6
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 81..328 coord: 161..379 coord: 346..505
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 95..300

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G022260.1	CsaV3_7G022260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding