CsaV3_4G030240 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G030240
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	S-protein homolog
Location	chr4: 19963679 .. 19964237 (+)
RNA-Seq Expression	CsaV3_4G030240
Synteny	CsaV3_4G030240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCTACGTACATATATCCACTATTTGCACCACGTCCCAATCATACCAATACAAAATAAAGGGTAGAAAGCCTTCGTATTCTTGTCTCTTCCTTTGTGTTTCAAACGACCCCTTAAAAATGGGCTCATCTCCAACGCTTGCACTGTCTTTGCTAATTTTATTTTTGTGTAACCTATGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCTTCAACCAAATTGAATATGGCATACCTGTCACCGTTCATTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTCCACTTGGACAAGGCTACTCGTTCAAGTTCAGACCCAACCTCGTGGGGACGACCCTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACGACAAAAGGGATGCAGGGAAATGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGAAAAACCCTGGCAAAGAAATTTGCTATAACTACGGAGATAAGGAGCCAGGCATTATTGTGTAA

mRNA sequence

CCCTACGTACATATATCCACTATTTGCACCACGTCCCAATCATACCAATACAAAATAAAGGGTAGAAAGCCTTCGTATTCTTGTCTCTTCCTTTGTGTTTCAAACGACCCCTTAAAAATGGGCTCATCTCCAACGCTTGCACTGTCTTTGCTAATTTTATTTTTGTGTAACCTATGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCTTCAACCAAATTGAATATGGCATACCTGTCACCGTTCATTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTCCACTTGGACAAGGCTACTCGTTCAAGTTCAGACCCAACCTCGTGGGGACGACCCTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACGACAAAAGGGATGCAGGGAAATGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGAAAAACCCTGGCAAAGAAATTTGCTATAACTACGGAGATAAGGAGCCAGGCATTATTGTGTAA

Coding sequence (CDS)

CCCTACGTACATATATCCACTATTTGCACCACGTCCCAATCATACCAATACAAAATAAAGGGTAGAAAGCCTTCGTATTCTTGTCTCTTCCTTTGTGTTTCAAACGACCCCTTAAAAATGGGCTCATCTCCAACGCTTGCACTGTCTTTGCTAATTTTATTTTTGTGTAACCTATGTGCAATTCAAGGATCGATCTTCATCCAACCAGTAACTACAGTCGTAATCTTCAACCAAATTGAATATGGCATACCTGTCACCGTTCATTGCAAATCCAAGAACGATGACCTAGGAGTCCATGTCCTTCCACTTGGACAAGGCTACTCGTTCAAGTTCAGACCCAACCTCGTGGGGACGACCCTGTTTTTCTGCAGCTTCACATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACGACAAAAGGGATGCAGGGAAATGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAAGACCCGAAAAACCCTGGCAAAGAAATTTGCTATAACTACGGAGATAAGGAGCCAGGCATTATTGTGTAA

Protein sequence

PYVHISTICTTSQSYQYKIKGRKPSYSCLFLCVSNDPLKMGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYSMCLQDPKNPGKEICYNYGDKEPGIIV*

Homology

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BLAST of CsaV3_4G030240 vs. NCBI nr
Match: KGN55015.2 (hypothetical protein Csa_011982, partial [Cucumis sativus])

HSP 1 Score: 401.7 bits (1031), Expect = 3.3e-108
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   PYVHISTICTTSQSYQYKIKGRKPSYSCLFLCVSNDPLKMGSSPTLALSLLILFLCNLCA 60
           PYVHISTICTTSQSYQYKIKGRKPSYSCLFLCVSNDPLKMGSSPTLALSLLILFLCNLCA
Sbjct: 1   PYVHISTICTTSQSYQYKIKGRKPSYSCLFLCVSNDPLKMGSSPTLALSLLILFLCNLCA 60

Query: 61  IQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTL 120
           IQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTL
Sbjct: 61  IQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTL 120

Query: 121 FFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYSMCLQDPKNPGKEICYNYGDKE 180
           FFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYSMCLQDPKNPGKEICYNYGDKE
Sbjct: 121 FFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYSMCLQDPKNPGKEICYNYGDKE 180

Query: 181 PGIIV 186
           PGIIV
Sbjct: 181 PGIIV 185

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BLAST of CsaV3_4G030240 vs. NCBI nr
Match: KGN55010.2 (hypothetical protein Csa_012448 [Cucumis sativus])

HSP 1 Score: 317.4 bits (812), Expect = 8.3e-83
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 40  MGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 99
           MGSSPTLALSLLI FLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 100 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 159
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 120

Query: 160 MCLQDPKNPGKEICYNYGDKEPGIIV 186
           MCLQDPKNPGKEICYNYGDKEPGIIV
Sbjct: 121 MCLQDPKNPGKEICYNYGDKEPGIIV 146

[Close]

BLAST of CsaV3_4G030240 vs. NCBI nr
Match: TYK13716.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 300.8 bits (769), Expect = 8.0e-78
Identity = 136/145 (93.79%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 40  MGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 99
           MGSSPTLALSLLI FLCN+ AIQGSIFIQPVTTVVI NQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 100 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 159
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFN+FDDKRDAGKCTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 160 MCLQDPKNPGKEICYNYGDKEPGII 185
           MCLQDPKNPGK+ICYNYGDKEP I+
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of CsaV3_4G030240 vs. NCBI nr
Match: KAA0063208.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 299.3 bits (765), Expect = 2.3e-77
Identity = 136/145 (93.79%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 40  MGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 99
           MGSSPTLALSLLI F CNL AIQGSIFIQPVTTVVI NQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 100 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 159
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFN+FDDKRDAGKCTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 160 MCLQDPKNPGKEICYNYGDKEPGII 185
           MCLQDPKNPGK+ICYNYGDKEP I+
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of CsaV3_4G030240 vs. NCBI nr
Match: KAA0045871.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 299.3 bits (765), Expect = 2.3e-77
Identity = 137/144 (95.14%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 40  MGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 99
           MGSSPTLALSLLILF CNL AIQGSIFIQPVTTVVI NQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLILFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 100 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 159
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFN+FDDKRDAGKCTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 160 MCLQDPKNPGKEICYNYGDKEPGI 184
           MCLQDPKNPGK+ICYNYGDKEP I
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSI 144

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BLAST of CsaV3_4G030240 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.7e-20
Identity = 45/90 (50.00%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 72  TVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 131
           TVV    +  G P+T+HCKSK DDLG+HV+P  Q Y FKF+PNL  +TLFFCSF W  Q 
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQF 88

Query: 132 QIYWFNVFDDKRDAGKCTTCTWIIHEYSMC 162
           +   F+++D +RD G C  C W I     C
Sbjct: 89  KS--FDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]

BLAST of CsaV3_4G030240 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.9e-20
Identity = 47/111 (42.34%), Postives = 66/111 (59.46%), Query Frame = 0


Query: 71  TTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLV-GTTLFFCSFTWTG 130
           + V I N++  G  + +HCKS +DDLG+ +L     +SFKFRP++V G TLFFC FTW G
Sbjct: 38  SVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPG 97

Query: 131 QHQIYWFNVFDDKRDAGK----CTTCTWIIHEYSMCLQDPKNPGKEICYNY 177
           Q +  WFN++DD RD  +    C  C W I +Y  C     +    ICY++
Sbjct: 98  QSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSEIDDAFNICYDW 146

[Close]

BLAST of CsaV3_4G030240 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.3e-18
Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 73  VVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQ 132
           V I N++  G+ + +HCKS +DDLG+ +L     +SFKFR ++VGTTLF+C FTW GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 133 IYWFNVFDDKRDAGK----CTTCTWIIHEYSMCLQDPKNPGKEICYNY 177
              F+++DD RD  +    C  C W I     C+    +    ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSESDHAFNICYDW 144

[Close]

BLAST of CsaV3_4G030240 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-17
Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = 0


Query: 38  LKMGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLG 97
           +K  S   + LS+++ ++ + C           T V + N I     +T+ C+SK+DDLG
Sbjct: 1   MKNSSKIFVVLSIILFYVISSCHGYNPF---AKTVVTVTNNISPQTTLTISCRSKDDDLG 60

Query: 98  VHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHE 157
            H+L  GQ + +KFRP+   TTLF C F W   + + WF+ +   RD G C +C W I+ 
Sbjct: 61  EHLLLHGQAFLWKFRPSWFRTTLFTCKFLW--NNNVKWFDTYRSDRDQGHCYSCNWSINA 120

Query: 158 YSMCLQDPKNPGKEICY 175
            S C+    N   + CY
Sbjct: 121 DSACISGNFNKKFDRCY 132

[Close]

BLAST of CsaV3_4G030240 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.5e-14
Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = 0


Query: 64  SIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFC 123
           S+F     TV I N +   + +  HCKSK+DDLG   L  G+ +SF F     G TL+FC
Sbjct: 41  SVFPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFC 100

Query: 124 SFTWTGQHQIYWFNVFDDKRDAG---KCTT--CTWIIHEYSMCLQDPKNPGKEICY 175
           SF+W   ++ + F+++ D RD+G   KC +  C W I     C  + +    ++CY
Sbjct: 101 SFSW--PNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCY 154

[Close]

BLAST of CsaV3_4G030240 vs. ExPASy TrEMBL
Match: A0A5D3CTD8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002420 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.9e-78
Identity = 136/145 (93.79%), Postives = 140/145 (96.55%), Query Frame = 0


Query: 40  MGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 99
           MGSSPTLALSLLI FLCN+ AIQGSIFIQPVTTVVI NQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 100 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 159
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFN+FDDKRDAGKCTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 160 MCLQDPKNPGKEICYNYGDKEPGII 185
           MCLQDPKNPGK+ICYNYGDKEP I+
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of CsaV3_4G030240 vs. ExPASy TrEMBL
Match: A0A5D3CQ97 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002410 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.1e-77
Identity = 136/145 (93.79%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 40  MGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 99
           MGSSPTLALSLLI F CNL AIQGSIFIQPVTTVVI NQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 100 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 159
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFN+FDDKRDAGKCTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 160 MCLQDPKNPGKEICYNYGDKEPGII 185
           MCLQDPKNPGK+ICYNYGDKEP I+
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of CsaV3_4G030240 vs. ExPASy TrEMBL
Match: A0A5A7TWM4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004070 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.1e-77
Identity = 137/144 (95.14%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 40  MGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 99
           MGSSPTLALSLLILF CNL AIQGSIFIQPVTTVVI NQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLILFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 100 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 159
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFN+FDDKRDAGKCTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 160 MCLQDPKNPGKEICYNYGDKEPGI 184
           MCLQDPKNPGK+ICYNYGDKEP I
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSI 144

[Close]

BLAST of CsaV3_4G030240 vs. ExPASy TrEMBL
Match: A0A5D3CQA2 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00110 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.1e-77
Identity = 136/145 (93.79%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 40  MGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 99
           MGSSPTLALSLLI FLCNL AIQGSIFIQPVTTVVI NQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 100 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 159
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFN+FDDKRDAGKCTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 160 MCLQDPKNPGKEICYNYGDKEPGII 185
           MCLQDP NPGK+ICYNYGDKEP I+
Sbjct: 121 MCLQDPTNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of CsaV3_4G030240 vs. ExPASy TrEMBL
Match: A0A5A7UYG6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001800 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.9e-77
Identity = 135/145 (93.10%), Postives = 139/145 (95.86%), Query Frame = 0


Query: 40  MGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 99
           MGSSPTLALSLLI F CN+ AIQGSIFIQPVTTVVI NQIEYGIPVTVHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 100 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 159
           VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFN+FDDKRDAGKCTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 160 MCLQDPKNPGKEICYNYGDKEPGII 185
           MCLQDPKNPGK+ICYNYGDKEP I+
Sbjct: 121 MCLQDPKNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of CsaV3_4G030240 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-21
Identity = 45/90 (50.00%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 72  TVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQH 131
           TVV    +  G P+T+HCKSK DDLG+HV+P  Q Y FKF+PNL  +TLFFCSF W  Q 
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQF 88

Query: 132 QIYWFNVFDDKRDAGKCTTCTWIIHEYSMC 162
           +   F+++D +RD G C  C W I     C
Sbjct: 89  KS--FDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]

BLAST of CsaV3_4G030240 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 98.6 bits (244), Expect = 5.6e-21
Identity = 47/111 (42.34%), Postives = 66/111 (59.46%), Query Frame = 0


Query: 71  TTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLV-GTTLFFCSFTWTG 130
           + V I N++  G  + +HCKS +DDLG+ +L     +SFKFRP++V G TLFFC FTW G
Sbjct: 38  SVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWPG 97

Query: 131 QHQIYWFNVFDDKRDAGK----CTTCTWIIHEYSMCLQDPKNPGKEICYNY 177
           Q +  WFN++DD RD  +    C  C W I +Y  C     +    ICY++
Sbjct: 98  QSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCRFSEIDDAFNICYDW 146

[Close]

BLAST of CsaV3_4G030240 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 92.8 bits (229), Expect = 3.1e-19
Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 73  VVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQ 132
           V I N++  G+ + +HCKS +DDLG+ +L     +SFKFR ++VGTTLF+C FTW GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 133 IYWFNVFDDKRDAGK----CTTCTWIIHEYSMCLQDPKNPGKEICYNY 177
              F+++DD RD  +    C  C W I     C+    +    ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSESDHAFNICYDW 144

[Close]

BLAST of CsaV3_4G030240 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-18
Identity = 42/112 (37.50%), Postives = 63/112 (56.25%), Query Frame = 0


Query: 66  FIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVHVLPLGQGYSFKFRPNLVGTTLFFCSF 125
           F  P TTVVI+N +   +P+  HCKSKNDDLG   + +   +SF+FRP++ G TLFFC F
Sbjct: 23  FDNPRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGF 82

Query: 126 TWTGQHQIYWFNVFDDKRDAG----KCTTCTWIIHEYSMCLQDPKNPGKEIC 174
            W    +++WF+++   RD       C  C W I +   C  +  +   ++C
Sbjct: 83  IW--DKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLNKNSNMFDVC 132

[Close]

BLAST of CsaV3_4G030240 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 47/142 (33.10%), Postives = 74/142 (52.11%), Query Frame = 0


Query: 40  MGSSPT-LALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGV 99
           MGS  T L   ++++F+        +I  +  T+VVI+N +  G+P+  HCKS+ DDLG 
Sbjct: 1   MGSLETCLLFFVMVMFM-------SAIMSRASTSVVIYNDLGGGLPLRHHCKSREDDLGY 60

Query: 100 HVLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAG----KCTTCTWI 159
             L  G+ +SF F P++ G TLF+C F+W  +  I  F+++   RD       C  C W 
Sbjct: 61  QSLAPGRSWSFGFTPDIFGRTLFYCRFSWGAESHI--FDIYKQSRDKEFQEFGCKKCEWK 120

Query: 160 IHEYSMCLQDPKNPGKEICYNY 177
           I +   C    K    + CY++
Sbjct: 121 IRKNGPCKFYKKTGMFDHCYSW 133

The following BLAST results are available for this feature:

BLAST of CsaV3_4G030240 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55015.2	3.3e-108	100.00	hypothetical protein Csa_011982, partial [Cucumis sativus]	[more]
KGN55010.2	8.3e-83	99.32	hypothetical protein Csa_012448 [Cucumis sativus]	[more]
TYK13716.1	8.0e-78	93.79	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0063208.1	2.3e-77	93.79	self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incom...	[more]
KAA0045871.1	2.3e-77	95.14	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]

BLAST of CsaV3_4G030240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23020	2.7e-20	50.00	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
F4JZG1	7.9e-20	42.34	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
Q9FMQ4	4.3e-18	39.81	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
P0DN93	1.6e-17	33.58	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
F4JLQ5	6.5e-14	35.34	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]

BLAST of CsaV3_4G030240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CTD8	3.9e-78	93.79	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5D3CQ97	1.1e-77	93.79	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5A7TWM4	1.1e-77	95.14	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3CQA2	1.1e-77	93.79	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G0...	[more]
A0A5A7UYG6	1.9e-77	93.10	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00...	[more]

BLAST of CsaV3_4G030240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04645.1	1.9e-21	50.00	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	5.6e-21	42.34	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	3.1e-19	39.81	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	1.2e-18	37.50	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	1.4e-16	33.10	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 72..175 e-value: 4.1E-28 score: 98.0
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 45..166
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 45..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G030240.1	CsaV3_4G030240.1	mRNA