CsaV3_4G031450 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AACTTTGCCTGCGCCGCTTTCATCACTGTTGCCGCCTCCCTGAGCATGGTTTTGGCCTCTGATGAAGCAGCGTCCCCAGCACCCGGCCCATCTAGCGCTGCTTCCGCTACTTTGCCAGTCGTCGGGACGTTGCTAGGTGCATCTGCTGCCTCTCTCATTGCTTACTGCCTTCAGTAA AACTTTGCCTGCGCCGCTTTCATCACTGTTGCCGCCTCCCTGAGCATGGTTTTGGCCTCTGATGAAGCAGCGTCCCCAGCACCCGGCCCATCTAGCGCTGCTTCCGCTACTTTGCCAGTCGTCGGGACGTTGCTAGGTGCATCTGCTGCCTCTCTCATTGCTTACTGCCTTCAGTAA AACTTTGCCTGCGCCGCTTTCATCACTGTTGCCGCCTCCCTGAGCATGGTTTTGGCCTCTGATGAAGCAGCGTCCCCAGCACCCGGCCCATCTAGCGCTGCTTCCGCTACTTTGCCAGTCGTCGGGACGTTGCTAGGTGCATCTGCTGCCTCTCTCATTGCTTACTGCCTTCAGTAA NFACAAFITVAASLSMVLASDEAASPAPGPSSAASATLPVVGTLLGASAASLIAYCLQ* Homology
BLAST of CsaV3_4G031450 vs. NCBI nr
Match: KAE8649766.1 (hypothetical protein Csa_011936, partial [Cucumis sativus]) HSP 1 Score: 100.9 bits (250), Expect = 3.9e-18 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0
BLAST of CsaV3_4G031450 vs. NCBI nr
Match: KAA0035760.1 (arabinogalactan peptide 23-like [Cucumis melo var. makuwa] >TYK29859.1 arabinogalactan peptide 23-like [Cucumis melo var. makuwa]) HSP 1 Score: 94.4 bits (233), Expect = 3.6e-16 Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of CsaV3_4G031450 vs. NCBI nr
Match: KAG6603249.1 (Fructokinase-like 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 68.9 bits (167), Expect = 1.6e-08 Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of CsaV3_4G031450 vs. NCBI nr
Match: PNT29922.1 (hypothetical protein POPTR_006G056200 [Populus trichocarpa]) HSP 1 Score: 57.0 bits (136), Expect = 6.4e-05 Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of CsaV3_4G031450 vs. NCBI nr
Match: KCW90250.1 (hypothetical protein EUGRSUZ_A02403, partial [Eucalyptus grandis]) HSP 1 Score: 56.6 bits (135), Expect = 8.3e-05 Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 0
BLAST of CsaV3_4G031450 vs. ExPASy Swiss-Prot
Match: Q8S2W4 (Arabinogalactan protein 23 OS=Arabidopsis thaliana OX=3702 GN=AGP23 PE=1 SV=2) HSP 1 Score: 47.8 bits (112), Expect = 5.1e-05 Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of CsaV3_4G031450 vs. ExPASy TrEMBL
Match: A0A5D3E271 (Arabinogalactan peptide 23-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G001050 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.7e-16 Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0
BLAST of CsaV3_4G031450 vs. ExPASy TrEMBL
Match: A0A2K1ZXB0 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G056200 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.1e-05 Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of CsaV3_4G031450 vs. ExPASy TrEMBL
Match: A0A059DIY4 (Uncharacterized protein (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A02403 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 4.0e-05 Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 0
BLAST of CsaV3_4G031450 vs. ExPASy TrEMBL
Match: A0A2P5CAP7 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_168770 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 5.3e-05 Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of CsaV3_4G031450 vs. ExPASy TrEMBL
Match: A0A2P5F1L3 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_125020 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 5.3e-05 Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of CsaV3_4G031450 vs. TAIR 10
Match: AT3G57690.1 (arabinogalactan protein 23 ) HSP 1 Score: 47.8 bits (112), Expect = 3.6e-06 Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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