CsaV3_3G001880 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G001880
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	TLDc domain-containing protein
Location	chr3: 1402864 .. 1405084 (+)
RNA-Seq Expression	CsaV3_3G001880
Synteny	CsaV3_3G001880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGTGGGTGGGGTCGATGCAAAACGAAAGGCAAATTGATTGGATTGAATTGGCGCCGAGAGAAAAAAATGGGTCAGAAAAATTTTAGAGATAAGGTGATGTTTTTTTCTTCAAAATCCCACTTTGGAATTGAAATGAATGTGAATCAATGGCTTCTTGCATCTTCAACAGTGTATTTTACAGGTTGAAGACGACCCCCAGCTGTTCATTTGGCAAATGGAATTGGAACTTTGGCAATGGCAACAAGAAACAAGACAAACCCCAAATCAAATACCATGATATTGTTCTTCCATTCCCTCTTTCTCTCCTTGAAAAAACATTCTTGAAACGTATTGTTCTTCCATTCCCTGAGTTTGATTGTTCTTGAATGTTAGTCTATGGCTTCCTGTTGTGTAATCTGTTGTCTCTACTGGGAAAGTTTTCATCAAAATTAGGTTCCATTTTTGTTATATAATGCTTTAGATTCTCTAGTTTTATGAAGATATGTAAGGCATGTTTGGGAGTGATTTTGAAAATGTTGGAACTCACTTTTTCGGATTCAAAATCAATTTTGAGTGAATAAAGATGTGTTTTTACAGCGATTTGTACTATTTCAAAATCACTCTCCTTAACATGCCCTTAGTCACTTTGTTGGTTTACTGACGCACATATTTCTTGAAAGGTGTTTTTGTCTCCATTGTTGGAACTTTTGTTTGAATGTTCTGTGCTTTGTCTTTGTTATTTTCTTTTACTTTTTTTTTTTTTTTTTTTTTGAAGTTGCATTTTCTTACTTTGTTAATTAGTTTTCTTGTACAGGTTTAGTAGAAAAACAATTTTAACATATTGGCAGTTATTATAATGCCATTGTTGATCAAACCCATCGAGTTTTTTAGTTTCTGAGACTGAGAAATCAAGGCTATAATCTTTTCTTGAGCCCTGATCATGTTTTGTTAAGGGACCATTTTTTTCCTTCTCAAAACTACTTTTTTGGAACTTTAATTAGGAAGTGACTTTATATTTTGAAGCATAGGGTAACTTGTGGGAAACCGTAACAGAATCAATCTTTGTTGTTACGTACAGAATAAATGAAGTGTTTCGAGGTACCTGGATCCACCCTTCTTGAGATATCTCTCAAGTCCTAATTCATTCACCAAAATAATATCTACCTACTCCTTACCACTCCCACTATTTATAACCTAATACCATAGTAATCTCCCTAACTAATAATTAACAATATACCCTTACAATAATCTAATAAAATTTTGGGGAAAAGCACAATGAGATGATGGTTTTTTTACTTTTCCCCTTCATCCCTACTCATCGGAACATTGCACTAGTTTTAGAGTTCTCTTTAGTTGGATTTCAGGGTGCATGTTGTTGGAATTGTTTAGTTCATATGATGTTGTATTAATCTTGATTGTAGTGTTGTAAGAAACAATCATCAAAATATGGATCACATCAATATAGACTCATTTGTATTTGTACTATCAAAAATATTTTCCAGGTAAAGAACTCAAATGCTGCTATAAGGCCACATCAGATGGATTCAGCGCTACCGATTTCCACGCGTGTTGCGACTTCAAGGGACCATGTGTCATAATTGGCTACACAGACAAATCCTTCAAGTTTGGTGCATTCAATCCTGAGGGCTACAGAAGCACAGATGACTACTACGACACTTTTGATGCATTCCTCTTCTATTGGAAAGACAATGAGGATGATGATCCCATCATCTTGCCCAAGGTTGGGGGTAGTGGTGCAGCGCTATTCGATTACGCGAGGGGCGGGCCACAGTTTGGGGCTGATGGATTGCTCATTGGCCCTCCTTTGGCACCTGTAATGGGTGGCTTTGCTGGGCCAGACACGAACTCGGGCGTCGGGGACCTAAGGCAAGCGAGGTCTCGGCTTGGACTATCTTATGCCAAGAGAAAAGATGGGAAGGACTCCATTTTTGGAGATGAAAATAGAGCTGTTGTTGCTGAAGTGCAGGTCTTTTGTAGCCCTCAAATAGCAAGCTTGTATTGAAAGTGGAATGAGCAAGCAGCCTCTAAAGGTGTTTTGCATTTGATGGTTATGTATATTCCTATTGCCATGGAACTTTGTTCATTGATTCTTTGTTCTTACAGAAATAATAGTGAATCGTTCAAATTATGAGGACAAAGCCCTAGTTCGTAAACATAGTAAGATAATATAATATAACGTACTAGTTTTATTTTATTCTAAAAATTTGCCTGGTTTCTAT

mRNA sequence

ATGGCTTCTTGCATCTTCAACAGTGTATTTTACAGGTTGAAGACGACCCCCAGCTGTTCATTTGGCAAATGGAATTGGAACTTTGGCAATGGCAACAAGAAACAAGACAAACCCCAAATCAAATACCATGATATTGTTCTTCCATTCCCTCTTTCTCTCCTTGAAAAAACATTCTTGAAACGTAAAGAACTCAAATGCTGCTATAAGGCCACATCAGATGGATTCAGCGCTACCGATTTCCACGCGTGTTGCGACTTCAAGGGACCATGTGTCATAATTGGCTACACAGACAAATCCTTCAAGTTTGGTGCATTCAATCCTGAGGGCTACAGAAGCACAGATGACTACTACGACACTTTTGATGCATTCCTCTTCTATTGGAAAGACAATGAGGATGATGATCCCATCATCTTGCCCAAGGTTGGGGGTAGTGGTGCAGCGCTATTCGATTACGCGAGGGGCGGGCCACAGTTTGGGGCTGATGGATTGCTCATTGGCCCTCCTTTGGCACCTGTAATGGGTGGCTTTGCTGGGCCAGACACGAACTCGGGCGTCGGGGACCTAAGGCAAGCGAGGTCTCGGCTTGGACTATCTTATGCCAAGAGAAAAGATGGGAAGGACTCCATTTTTGGAGATGAAAATAGAGCTGTTGTTGCTGAAGTGCAGGTCTTTTGTAGCCCTCAAATAGCAAGCTTGTATTGA

Coding sequence (CDS)

ATGGCTTCTTGCATCTTCAACAGTGTATTTTACAGGTTGAAGACGACCCCCAGCTGTTCATTTGGCAAATGGAATTGGAACTTTGGCAATGGCAACAAGAAACAAGACAAACCCCAAATCAAATACCATGATATTGTTCTTCCATTCCCTCTTTCTCTCCTTGAAAAAACATTCTTGAAACGTAAAGAACTCAAATGCTGCTATAAGGCCACATCAGATGGATTCAGCGCTACCGATTTCCACGCGTGTTGCGACTTCAAGGGACCATGTGTCATAATTGGCTACACAGACAAATCCTTCAAGTTTGGTGCATTCAATCCTGAGGGCTACAGAAGCACAGATGACTACTACGACACTTTTGATGCATTCCTCTTCTATTGGAAAGACAATGAGGATGATGATCCCATCATCTTGCCCAAGGTTGGGGGTAGTGGTGCAGCGCTATTCGATTACGCGAGGGGCGGGCCACAGTTTGGGGCTGATGGATTGCTCATTGGCCCTCCTTTGGCACCTGTAATGGGTGGCTTTGCTGGGCCAGACACGAACTCGGGCGTCGGGGACCTAAGGCAAGCGAGGTCTCGGCTTGGACTATCTTATGCCAAGAGAAAAGATGGGAAGGACTCCATTTTTGGAGATGAAAATAGAGCTGTTGTTGCTGAAGTGCAGGTCTTTTGTAGCCCTCAAATAGCAAGCTTGTATTGA

Protein sequence

MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLKRKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY*

Homology

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BLAST of CsaV3_3G001880 vs. NCBI nr
Match: XP_004148731.1 (uncharacterized protein LOC101203266 [Cucumis sativus] >KGN55780.1 hypothetical protein Csa_011325 [Cucumis sativus])

HSP 1 Score: 496.5 bits (1277), Expect = 1.3e-136
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60
           MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK
Sbjct: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60

Query: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120
           RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF
Sbjct: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120

Query: 121 DAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPD 180
           DAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPD
Sbjct: 121 DAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPD 180

Query: 181 TNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           TNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY
Sbjct: 181 TNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 233

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BLAST of CsaV3_3G001880 vs. NCBI nr
Match: XP_008448709.1 (PREDICTED: uncharacterized protein LOC103490798 [Cucumis melo])

HSP 1 Score: 485.3 bits (1248), Expect = 2.9e-133
Identity = 228/234 (97.44%), Postives = 233/234 (99.57%), Query Frame = 0


Query: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60
           MASCIFNSVFYRLKTTPSCSFGKWNWNFG+GNKKQDKPQIKYHDIVLPFP+SLL+KTFLK
Sbjct: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGDGNKKQDKPQIKYHDIVLPFPVSLLDKTFLK 60

Query: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120
           RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF
Sbjct: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120

Query: 121 DAFLFYWKDNEDD-DPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180
           DAFLFYWKDNED+ DPI+LPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP
Sbjct: 121 DAFLFYWKDNEDNADPIVLPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180

Query: 181 DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY
Sbjct: 181 DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234

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BLAST of CsaV3_3G001880 vs. NCBI nr
Match: XP_038905422.1 (uncharacterized protein LOC120091462 [Benincasa hispida])

HSP 1 Score: 450.7 bits (1158), Expect = 7.9e-123
Identity = 212/222 (95.50%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 12  RLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLKRKELKCCYKAT 71
           RLKTTPS SFG WNWNFGNGNKK++KPQIKYHDIVLPFPLSL++KTFLKRKELKCCYKAT
Sbjct: 38  RLKTTPSSSFG-WNWNFGNGNKKENKPQIKYHDIVLPFPLSLVDKTFLKRKELKCCYKAT 97

Query: 72  SDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAFLFYWKDNE 131
           SDGFSATDFH CCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAFLFYW+DNE
Sbjct: 98  SDGFSATDFHTCCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAFLFYWEDNE 157

Query: 132 DDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTNSGVGDLRQA 191
           D DPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTNSGVGDLRQA
Sbjct: 158 DADPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTNSGVGDLRQA 217

Query: 192 RSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           RSRLGLSYAKRKDGK+SIFGDENRAVVAEVQVFCSPQIASLY
Sbjct: 218 RSRLGLSYAKRKDGKESIFGDENRAVVAEVQVFCSPQIASLY 258

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BLAST of CsaV3_3G001880 vs. NCBI nr
Match: XP_022145275.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111014765 [Momordica charantia])

HSP 1 Score: 439.1 bits (1128), Expect = 2.4e-119
Identity = 209/234 (89.32%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60
           MASCIFNS+FYRLKT P+ SFG WNW+FGNG+KK+DKP IKYH I LPFP SL++KTFLK
Sbjct: 1   MASCIFNSLFYRLKTIPTSSFG-WNWSFGNGSKKEDKPNIKYHQIDLPFPPSLVDKTFLK 60

Query: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120
            +ELKCCYKATSDGFSATDFH CCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF
Sbjct: 61  GRELKCCYKATSDGFSATDFHTCCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120

Query: 121 DAFLFYWK-DNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180
           DAFLFYW+ DNE  DPIILPKVGGSGAALFDYARGGPQFGADGLLI PPLAPVMGGFAGP
Sbjct: 121 DAFLFYWELDNEAADPIILPKVGGSGAALFDYARGGPQFGADGLLIXPPLAPVMGGFAGP 180

Query: 181 DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           DTNSGVGDLRQA+SRLGLSYAKRKDGK+SIFGDE RAVVAEVQVFCSPQIASLY
Sbjct: 181 DTNSGVGDLRQAKSRLGLSYAKRKDGKESIFGDEGRAVVAEVQVFCSPQIASLY 233

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BLAST of CsaV3_3G001880 vs. NCBI nr
Match: XP_023005957.1 (uncharacterized protein LOC111498814 [Cucurbita maxima])

HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-118
Identity = 207/231 (89.61%), Postives = 214/231 (92.64%), Query Frame = 0


Query: 4   CIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLKRKE 63
           C+      RLKTTPSCSFG WNWNFGN N K +KPQIKYHDI LPFPLSL++ TFLKRKE
Sbjct: 32  CLRKDFGIRLKTTPSCSFG-WNWNFGNANNKDNKPQIKYHDIDLPFPLSLVDNTFLKRKE 91

Query: 64  LKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF 123
           LKCCYKATSDGFSATDFH CCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF
Sbjct: 92  LKCCYKATSDGFSATDFHTCCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF 151

Query: 124 LFYWKDNED-DDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN 183
           LFYW+ NE  DDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN
Sbjct: 152 LFYWEHNETADDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN 211

Query: 184 SGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           SG+GDLRQA+SRLGLSYAKRKDGKDSIFGD NRAVVAEVQVFCSPQIASLY
Sbjct: 212 SGIGDLRQAKSRLGLSYAKRKDGKDSIFGDANRAVVAEVQVFCSPQIASLY 261

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BLAST of CsaV3_3G001880 vs. ExPASy TrEMBL
Match: A0A0A0L1B1 (TLDc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011810 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 6.1e-137
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60
           MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK
Sbjct: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60

Query: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120
           RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF
Sbjct: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120

Query: 121 DAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPD 180
           DAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPD
Sbjct: 121 DAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPD 180

Query: 181 TNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           TNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY
Sbjct: 181 TNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 233

[Close]

BLAST of CsaV3_3G001880 vs. ExPASy TrEMBL
Match: A0A1S3BKB8 (uncharacterized protein LOC103490798 OS=Cucumis melo OX=3656 GN=LOC103490798 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.4e-133
Identity = 228/234 (97.44%), Postives = 233/234 (99.57%), Query Frame = 0


Query: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60
           MASCIFNSVFYRLKTTPSCSFGKWNWNFG+GNKKQDKPQIKYHDIVLPFP+SLL+KTFLK
Sbjct: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGDGNKKQDKPQIKYHDIVLPFPVSLLDKTFLK 60

Query: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120
           RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF
Sbjct: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120

Query: 121 DAFLFYWKDNEDD-DPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180
           DAFLFYWKDNED+ DPI+LPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP
Sbjct: 121 DAFLFYWKDNEDNADPIVLPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180

Query: 181 DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY
Sbjct: 181 DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234

[Close]

BLAST of CsaV3_3G001880 vs. ExPASy TrEMBL
Match: A0A6J1CU04 (LOW QUALITY PROTEIN: uncharacterized protein LOC111014765 OS=Momordica charantia OX=3673 GN=LOC111014765 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.1e-119
Identity = 209/234 (89.32%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60
           MASCIFNS+FYRLKT P+ SFG WNW+FGNG+KK+DKP IKYH I LPFP SL++KTFLK
Sbjct: 1   MASCIFNSLFYRLKTIPTSSFG-WNWSFGNGSKKEDKPNIKYHQIDLPFPPSLVDKTFLK 60

Query: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120
            +ELKCCYKATSDGFSATDFH CCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF
Sbjct: 61  GRELKCCYKATSDGFSATDFHTCCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120

Query: 121 DAFLFYWK-DNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180
           DAFLFYW+ DNE  DPIILPKVGGSGAALFDYARGGPQFGADGLLI PPLAPVMGGFAGP
Sbjct: 121 DAFLFYWELDNEAADPIILPKVGGSGAALFDYARGGPQFGADGLLIXPPLAPVMGGFAGP 180

Query: 181 DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           DTNSGVGDLRQA+SRLGLSYAKRKDGK+SIFGDE RAVVAEVQVFCSPQIASLY
Sbjct: 181 DTNSGVGDLRQAKSRLGLSYAKRKDGKESIFGDEGRAVVAEVQVFCSPQIASLY 233

[Close]

BLAST of CsaV3_3G001880 vs. ExPASy TrEMBL
Match: A0A6J1KUL2 (uncharacterized protein LOC111498814 OS=Cucurbita maxima OX=3661 GN=LOC111498814 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 7.4e-119
Identity = 207/231 (89.61%), Postives = 214/231 (92.64%), Query Frame = 0


Query: 4   CIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLKRKE 63
           C+      RLKTTPSCSFG WNWNFGN N K +KPQIKYHDI LPFPLSL++ TFLKRKE
Sbjct: 32  CLRKDFGIRLKTTPSCSFG-WNWNFGNANNKDNKPQIKYHDIDLPFPLSLVDNTFLKRKE 91

Query: 64  LKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF 123
           LKCCYKATSDGFSATDFH CCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF
Sbjct: 92  LKCCYKATSDGFSATDFHTCCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF 151

Query: 124 LFYWKDNED-DDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN 183
           LFYW+ NE  DDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN
Sbjct: 152 LFYWEHNETADDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN 211

Query: 184 SGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           SG+GDLRQA+SRLGLSYAKRKDGKDSIFGD NRAVVAEVQVFCSPQIASLY
Sbjct: 212 SGIGDLRQAKSRLGLSYAKRKDGKDSIFGDANRAVVAEVQVFCSPQIASLY 261

[Close]

BLAST of CsaV3_3G001880 vs. ExPASy TrEMBL
Match: A0A6J1G5M9 (uncharacterized protein LOC111451012 OS=Cucurbita moschata OX=3662 GN=LOC111451012 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.2e-118
Identity = 206/231 (89.18%), Postives = 214/231 (92.64%), Query Frame = 0


Query: 4   CIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLKRKE 63
           C+      RLKTTPSCSFG WNWNFGN N K +KPQIKYHDI LPFPLSL++ TFLKRKE
Sbjct: 43  CLRKDFGIRLKTTPSCSFG-WNWNFGNANNKDNKPQIKYHDIDLPFPLSLVDNTFLKRKE 102

Query: 64  LKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF 123
           LKCCYKATSDGFSATDFH CCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF
Sbjct: 103 LKCCYKATSDGFSATDFHTCCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF 162

Query: 124 LFYWKDNED-DDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN 183
           LFYW+ NE  DDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN
Sbjct: 163 LFYWEHNETADDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN 222

Query: 184 SGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           SG+GDLRQA+SRLGLSYAKRKDGKDSIFGD NRAVVAEVQVFCSP+IASLY
Sbjct: 223 SGIGDLRQAKSRLGLSYAKRKDGKDSIFGDANRAVVAEVQVFCSPRIASLY 272

[Close]

BLAST of CsaV3_3G001880 vs. TAIR 10
Match: AT1G32520.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 143 Blast hits to 142 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). )

HSP 1 Score: 334.0 bits (855), Expect = 1.0e-91
Identity = 169/240 (70.42%), Postives = 190/240 (79.17%), Query Frame = 0


Query: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFG-NGNKKQDK----PQIKYH-DIVLPFPLSLL 60
           MASC  ++ F+ +          +N  FG N  KK D      Q  YH D+ +PF LS++
Sbjct: 1   MASCAISNSFHTVTFKTLKRISPYNSLFGWNSGKKIDNIRPPQQPAYHDDVEIPFSLSMV 60

Query: 61  EKTFLKRKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYT-DKSFKFGAFNPEGYRST 120
            KTFLK +ELKCCYKA+ DGF AT FH  CDFKGPCVII YT DKSFKFG F+PEGYRST
Sbjct: 61  NKTFLKGRELKCCYKASIDGFGATKFHERCDFKGPCVIIAYTKDKSFKFGGFSPEGYRST 120

Query: 121 DDYYDTFDAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVM 180
           DDYYDTFDAFLFYW + + DDPI+LPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVM
Sbjct: 121 DDYYDTFDAFLFYWLE-DCDDPIVLPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVM 180

Query: 181 GGFAGPDTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           GGFAGPDTNSG+GDLR A+SRLGLSYAKRKDGK+SIFGDEN+  + +V VFCSP IASLY
Sbjct: 181 GGFAGPDTNSGIGDLRVAKSRLGLSYAKRKDGKESIFGDENKVSLDDVLVFCSPYIASLY 239

The following BLAST results are available for this feature:

BLAST of CsaV3_3G001880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148731.1	1.3e-136	100.00	uncharacterized protein LOC101203266 [Cucumis sativus] >KGN55780.1 hypothetical ...	[more]
XP_008448709.1	2.9e-133	97.44	PREDICTED: uncharacterized protein LOC103490798 [Cucumis melo]	[more]
XP_038905422.1	7.9e-123	95.50	uncharacterized protein LOC120091462 [Benincasa hispida]	[more]
XP_022145275.1	2.4e-119	89.32	LOW QUALITY PROTEIN: uncharacterized protein LOC111014765 [Momordica charantia]	[more]
XP_023005957.1	1.5e-118	89.61	uncharacterized protein LOC111498814 [Cucurbita maxima]	[more]

BLAST of CsaV3_3G001880 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G001880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1B1	6.1e-137	100.00	TLDc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011810 PE=4 S...	[more]
A0A1S3BKB8	1.4e-133	97.44	uncharacterized protein LOC103490798 OS=Cucumis melo OX=3656 GN=LOC103490798 PE=...	[more]
A0A6J1CU04	1.1e-119	89.32	LOW QUALITY PROTEIN: uncharacterized protein LOC111014765 OS=Momordica charantia...	[more]
A0A6J1KUL2	7.4e-119	89.61	uncharacterized protein LOC111498814 OS=Cucurbita maxima OX=3661 GN=LOC111498814...	[more]
A0A6J1G5M9	2.2e-118	89.18	uncharacterized protein LOC111451012 OS=Cucurbita moschata OX=3662 GN=LOC1114510...	[more]

BLAST of CsaV3_3G001880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32520.1	1.0e-91	70.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006571	TLDc domain	PFAM	PF07534	TLD	coord: 67..159 e-value: 3.6E-8 score: 33.7
IPR006571	TLDc domain	PROSITE	PS51886	TLDC	coord: 44..227 score: 14.464852
None	No IPR available	PANTHER	PTHR14241	INTERFERON-INDUCED PROTEIN 44	coord: 34..213
None	No IPR available	PANTHER	PTHR14241:SF21	EXPRESSED PROTEIN	coord: 34..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G001880.1	CsaV3_3G001880.1	mRNA