CsaV3_3G023570 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G023570
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 21317216 .. 21317515 (+)
RNA-Seq ExpressionCsaV3_3G023570
SyntenyCsaV3_3G023570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCACTCATCACTTTTACCCAAAAACAGATGCCTCTGTTTACACTTTTTTCACTTCTCTCCTTCATCCCACCTTAACCCCTTCTCTGTTTCCAGCTCATTTTCTTCTTCTTCCTTCCCCCATTATTCTTTTCCCAATTTTAGCATACTCTTCATTTTCCTTCGTTTTCTGCTCTAAATCTTCCTGTTTCCTACAAATCTTCACTTTTTTCATTCATTCATCTTCTGGGTCTTTCCCTTTTTTCATATACTTCTTCCCCATCTCTCTACTTTTTAGTCTTTTTGTATACAGATTATGA

mRNA sequence

ATGATCACTCATCACTTTTACCCAAAAACAGATGCCTCTGTTTACACTTTTTTCACTTCTCTCCTTCATCCCACCTTAACCCCTTCTCTGTTTCCAGCTCATTTTCTTCTTCTTCCTTCCCCCATTATTCTTTTCCCAATTTTAGCATACTCTTCATTTTCCTTCGTTTTCTGCTCTAAATCTTCCTGTTTCCTACAAATCTTCACTTTTTTCATTCATTCATCTTCTGGGTCTTTCCCTTTTTTCATATACTTCTTCCCCATCTCTCTACTTTTTAGTCTTTTTGTATACAGATTATGA

Coding sequence (CDS)

ATGATCACTCATCACTTTTACCCAAAAACAGATGCCTCTGTTTACACTTTTTTCACTTCTCTCCTTCATCCCACCTTAACCCCTTCTCTGTTTCCAGCTCATTTTCTTCTTCTTCCTTCCCCCATTATTCTTTTCCCAATTTTAGCATACTCTTCATTTTCCTTCGTTTTCTGCTCTAAATCTTCCTGTTTCCTACAAATCTTCACTTTTTTCATTCATTCATCTTCTGGGTCTTTCCCTTTTTTCATATACTTCTTCCCCATCTCTCTACTTTTTAGTCTTTTTGTATACAGATTATGA

Protein sequence

MITHHFYPKTDASVYTFFTSLLHPTLTPSLFPAHFLLLPSPIILFPILAYSSFSFVFCSKSSCFLQIFTFFIHSSSGSFPFFIYFFPISLLFSLFVYRL*
Homology
[Close]
BLAST of CsaV3_3G023570 vs. NCBI nr
Match: KGN58030.1 (hypothetical protein Csa_011207 [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 3.1e-44
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MITHHFYPKTDASVYTFFTSLLHPTLTPSLFPAHFLLLPSPIILFPILAYSSFSFVFCSK 60
           MITHHFYPKTDASVYTFFTSLLHPTLTPSLFPAHFLLLPSPIILFPILAYSSFSFVFCSK
Sbjct: 1   MITHHFYPKTDASVYTFFTSLLHPTLTPSLFPAHFLLLPSPIILFPILAYSSFSFVFCSK 60

Query: 61  SSCFLQIFTFFIHSSSGSFPFFIYFFPISLLFSLFVYRL 100
           SSCFLQIFTFFIHSSSGSFPFFIYFFPISLLFSLFVYRL
Sbjct: 61  SSCFLQIFTFFIHSSSGSFPFFIYFFPISLLFSLFVYRL 99

[Close]
BLAST of CsaV3_3G023570 vs. ExPASy TrEMBL
Match: A0A0A0L7Z1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G444580 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.5e-44
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MITHHFYPKTDASVYTFFTSLLHPTLTPSLFPAHFLLLPSPIILFPILAYSSFSFVFCSK 60
           MITHHFYPKTDASVYTFFTSLLHPTLTPSLFPAHFLLLPSPIILFPILAYSSFSFVFCSK
Sbjct: 1   MITHHFYPKTDASVYTFFTSLLHPTLTPSLFPAHFLLLPSPIILFPILAYSSFSFVFCSK 60

Query: 61  SSCFLQIFTFFIHSSSGSFPFFIYFFPISLLFSLFVYRL 100
           SSCFLQIFTFFIHSSSGSFPFFIYFFPISLLFSLFVYRL
Sbjct: 61  SSCFLQIFTFFIHSSSGSFPFFIYFFPISLLFSLFVYRL 99

The following BLAST results are available for this feature:
BLAST of CsaV3_3G023570 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58030.13.1e-44100.00hypothetical protein Csa_011207 [Cucumis sativus][more]
BLAST of CsaV3_3G023570 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G023570 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7Z11.5e-44100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G444580 PE=4 SV=1[more]
BLAST of CsaV3_3G023570 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G023570.1CsaV3_3G023570.1mRNA