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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGTAAAAAAGTCATAAAAACGGTTAACCCTCAACGCCTCTCAAGGGTTCTTCACGTGCCAGTCACGTGGAAGGAAGGGAAGCGAACCGGGTCTAAGAAAACCGCACTATCTGGGGTAAGTACTATTAGTATAATTGTACTATAAGCGCGGAGTTGAGAAAGACGCCGGCTTTTTGAACGATTTAATCGGCGATCTAAAGAAGAAGCCTCTTGGTTCCTTCTTCTCCTCTTCGCTTCTCTGTTAA mRNA sequence ATGAGTAAAAAAGTCATAAAAACGGTTAACCCTCAACGCCTCTCAAGGGTTCTTCACGTGCCAGTCACGTGGAAGGAAGGGAAGCGAACCGGGTCTAAGAAAACCGCACTATCTGGGCGCGGAGTTGAGAAAGACGCCGGCTTTTTGAACGATTTAATCGGCGATCTAAAGAAGAAGCCTCTTGGTTCCTTCTTCTCCTCTTCGCTTCTCTGTTAA Coding sequence (CDS) ATGAGTAAAAAAGTCATAAAAACGGTTAACCCTCAACGCCTCTCAAGGGTTCTTCACGTGCCAGTCACGTGGAAGGAAGGGAAGCGAACCGGGTCTAAGAAAACCGCACTATCTGGGCGCGGAGTTGAGAAAGACGCCGGCTTTTTGAACGATTTAATCGGCGATCTAAAGAAGAAGCCTCTTGGTTCCTTCTTCTCCTCTTCGCTTCTCTGTTAA Protein sequence MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKPLGSFFSSSLLC*
Homology
BLAST of CsaV3_3G001700 vs. NCBI nr
Match: KGN55758.1 (hypothetical protein Csa_010251 [Cucumis sativus]) HSP 1 Score: 144.1 bits (362), Expect = 4.8e-31 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
Query: 1 MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP 60
MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP
Sbjct: 1 MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP 60
Query: 61 LGSFFSSSLLC 72
LGSFFSSSLLC
Sbjct: 61 LGSFFSSSLLC 71
BLAST of CsaV3_3G001700 vs. ExPASy TrEMBL
Match: A0A0A0L1V8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011610 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.3e-31 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
Query: 1 MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP 60
MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP
Sbjct: 1 MSKKVIKTVNPQRLSRVLHVPVTWKEGKRTGSKKTALSGRGVEKDAGFLNDLIGDLKKKP 60
Query: 61 LGSFFSSSLLC 72
LGSFFSSSLLC
Sbjct: 61 LGSFFSSSLLC 71
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN55758.1 | 4.8e-31 | 100.00 | hypothetical protein Csa_010251 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L1V8 | 2.3e-31 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011610 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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