Tan0022644.1 (mRNA) Snake gourd v1

Overview


Name	Tan0022644.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	guanine nucleotide-binding protein subunit gamma 3-like
Location	LG08: 404101 .. 405689 (+)
Sequence length	657
RNA-Seq Expression	Tan0022644.1
Synteny	Tan0022644.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTTCTTCTTCTTCTTCACTTCCATCCCTCCCTCCCCCTCACCCCAAGTCTCCTCCTGAATATCCAGATTTGTATGGAAAACGACGACAAACAGCCAAGCTTCACATGATCGACAGAGAGATTGGCTTTCTCCAGGTTCTTTTCATTTTCTCTTCTCTCTGCTTTTCCTTTCTTTTTTACTTACTTCCCTTAATCTACACAAATTTTGCTGGACTGTCTCTTGGGTATGGGGACCGACTGGGACATCCCTCAACTCACATTTCACCCTTCTACCTCTTTACAAACCAAAACGACTGTTTATTTGCACCCTTGTCCCTAAATCAGTTATCACCCTCATTCATTTTGTCTCTTGTTCTTTTCTTTTCTTTTCTTATATAAATAAAGCTTTGAGATCCTTGTAACACTGAGATTTGAGTTTTGAGTTTTGCTCACACCACAAATCCCATTGGCACTCATGTTCAATCGAATCGTTTGGGTTTGATTCCTGCCATTGCTTTCTCTTAGCTTATGAAAAATTAACAAGCTTTTCTTGACGATGTCTCTGGAGCAGGAAGAATTGAAGTCTACGGAAGGTCTTCCACCTGCATCTCGATGCTGCAAAGAGTATGTACACCAGTTCATTTGCCAAAGACTTTGAACTTTTACTTCGGATTAAATTGGATCTTTTGCCCATCTAGTTAGCTCCCATTTAGTGTATTTGTGTTTTGAAAAAAAAAAAAACACTTTGCAGGGTAGCTGACTATGTGGTCGTCAAATCAGATCCCTTGATACCAACGTAAGGGGTTTCCCTCCCATCATTTAAATTTTGTAAAAATCTTTGTAGTCAATTCATGCTATATGTTTCTTCTTTTAATCAGATATAAGAAGCATCGCCGCAGATGTCAGTTTTGGAAATGGCTCTGGTATGACTCTCGCCTTACCATATTTCTTCCTTTCTGTGGAGCAGGAATAATTAGAGCCAAAGCTTCTCTTACTTTTGGTAGTTGGCTAGTATAGTATAGCTTCGCAGTTGTAATCTTAAGGTAAATTTGGGTAATAGCAAGCAATCTTTAGTTTAGACGATAGGTGCAGGAGGTTATTTGAGTCTGGAACAGAATAGACCATTTACCATATGAGAGCTTTGGTAATTGAGTAAATTAGTAATGTGTCTCCCATGTCGAATGTAGACTCTGCATCGTGTTGACACAGGTTAATTCTCACGTTGATGCAGTGGATTCCCCTGTTGTAAGTTATCGTGGATTTGCTGTTGTTGTTATGCTGGATGTTCGATCCATCTCGAAATCCCACCATGCTGCAACTGTAATAACCCATGTAAATGTCTATCATGCGGTAGCTGTAAATTACCCAAGTGGAAGTGTTGTGGGGAGTGTTGCAGTTGTCCAACGCTACCCCGTTGCTGCTCATGCTCTTGCCCAACCATGTCGTGTTTTTCATTACCTTCATGTCCTGAATGTCCATGCTGTGAATGCAAATGCAAATGCAAATGTTCGTTAGGAAAATGTCCAAAAATACAACCATGTTGCTGTTTTGGTAGCAGAAGCTGCTGCTGCTGTTGTAATCCATGTCACTTGTGTTGCTGCTAG

mRNA sequence

ATGGCTACTTCTTCTTCTTCTTCACTTCCATCCCTCCCTCCCCCTCACCCCAAGTCTCCTCCTGAATATCCAGATTTGTATGGAAAACGACGACAAACAGCCAAGCTTCACATGATCGACAGAGAGATTGGCTTTCTCCAGGAAGAATTGAAGTCTACGGAAGGTCTTCCACCTGCATCTCGATGCTGCAAAGAGGTAGCTGACTATGTGGTCGTCAAATCAGATCCCTTGATACCAACATATAAGAAGCATCGCCGCAGATGTCAGTTTTGGAAATGGCTCTGTGGATTCCCCTGTTGTAAGTTATCGTGGATTTGCTGTTGTTGTTATGCTGGATGTTCGATCCATCTCGAAATCCCACCATGCTGCAACTGTAATAACCCATGTAAATGTCTATCATGCGGTAGCTGTAAATTACCCAAGTGGAAGTGTTGTGGGGAGTGTTGCAGTTGTCCAACGCTACCCCGTTGCTGCTCATGCTCTTGCCCAACCATGTCGTGTTTTTCATTACCTTCATGTCCTGAATGTCCATGCTGTGAATGCAAATGCAAATGCAAATGTTCGTTAGGAAAATGTCCAAAAATACAACCATGTTGCTGTTTTGGTAGCAGAAGCTGCTGCTGCTGTTGTAATCCATGTCACTTGTGTTGCTGCTAG

Coding sequence (CDS)

ATGGCTACTTCTTCTTCTTCTTCACTTCCATCCCTCCCTCCCCCTCACCCCAAGTCTCCTCCTGAATATCCAGATTTGTATGGAAAACGACGACAAACAGCCAAGCTTCACATGATCGACAGAGAGATTGGCTTTCTCCAGGAAGAATTGAAGTCTACGGAAGGTCTTCCACCTGCATCTCGATGCTGCAAAGAGGTAGCTGACTATGTGGTCGTCAAATCAGATCCCTTGATACCAACATATAAGAAGCATCGCCGCAGATGTCAGTTTTGGAAATGGCTCTGTGGATTCCCCTGTTGTAAGTTATCGTGGATTTGCTGTTGTTGTTATGCTGGATGTTCGATCCATCTCGAAATCCCACCATGCTGCAACTGTAATAACCCATGTAAATGTCTATCATGCGGTAGCTGTAAATTACCCAAGTGGAAGTGTTGTGGGGAGTGTTGCAGTTGTCCAACGCTACCCCGTTGCTGCTCATGCTCTTGCCCAACCATGTCGTGTTTTTCATTACCTTCATGTCCTGAATGTCCATGCTGTGAATGCAAATGCAAATGCAAATGTTCGTTAGGAAAATGTCCAAAAATACAACCATGTTGCTGTTTTGGTAGCAGAAGCTGCTGCTGCTGTTGTAATCCATGTCACTTGTGTTGCTGCTAG

Protein sequence

MATSSSSSLPSLPPPHPKSPPEYPDLYGKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRCCKEVADYVVVKSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCCNCNNPCKCLSCGSCKLPKWKCCGECCSCPTLPRCCSCSCPTMSCFSLPSCPECPCCECKCKCKCSLGKCPKIQPCCCFGSRSCCCCCNPCHLCCC

Homology

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BLAST of Tan0022644.1 vs. ExPASy Swiss-Prot
Match: Q6AWT8 (Guanine nucleotide-binding protein subunit gamma 3 OS=Arabidopsis thaliana OX=3702 GN=GG3 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.8e-46
Identity = 121/239 (50.63%), Postives = 142/239 (59.41%), Query Frame = 0


Query: 3   TSSSSSLPSLPPPHPKSPPEYPDLYGKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRC 62
           +SSS +  SLPPP PKSPPEYPDLYGKRR+ A++ M++REIGFL+ E+K  EG+ PASRC
Sbjct: 21  SSSSLAPSSLPPPRPKSPPEYPDLYGKRREAARVQMLEREIGFLEGEIKFIEGVQPASRC 80

Query: 63  CKEVADYVVVKSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPC 122
            KEV+D+VV  SDPLIP  +K RR  +FWKWLCG PC  L   CCCC + CS HL  P C
Sbjct: 81  IKEVSDFVVANSDPLIPAQRKSRRSFRFWKWLCG-PCLSLVSFCCCCQSKCSCHLRKPKC 140

Query: 123 CNCNNPCKCLSCGSCKLPKWKCCGECCSCPTL--PRC-----CSCSCPTMSCFSLPSC-- 182
           CNC + C C+    C      CC   C CP L  P C     C CSCP MSC  +PSC  
Sbjct: 141 CNCTS-CSCIGSKCC---DGSCCSNICCCPRLSCPSCSCFRGCWCSCPDMSC-CIPSCFR 200

Query: 183 ------PEC------PCCECKCKCK-CSLGKCPKIQPC-CCFGSRSCCCCCNPCHLCCC 219
                 P C       CC C CK +  S   CPK++ C CCF     C C N C   CC
Sbjct: 201 SCSCTRPSCLNKKKSSCCSCNCKIRWSSCFSCPKVRLCSCCF-----CNCKNLCSNPCC 248

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BLAST of Tan0022644.1 vs. ExPASy Swiss-Prot
Match: A2X0N9 (Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. indica OX=39946 GN=RGG2 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.2e-04
Identity = 22/52 (42.31%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 28  GKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRCCKEVADYVVVKSDPLIP 80
           GK R +A +  +D+E+  LQ+EL   E + PAS  C+ V      KSDPL+P
Sbjct: 65  GKHRLSAAIARLDQELQSLQDELNELETMEPASAACQGVITSTEGKSDPLLP 116

[Close]

BLAST of Tan0022644.1 vs. ExPASy Swiss-Prot
Match: Q6YXX9 (Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RGG2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.2e-04
Identity = 22/52 (42.31%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 28  GKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRCCKEVADYVVVKSDPLIP 80
           GK R +A +  +D+E+  LQ+EL   E + PAS  C+ V      KSDPL+P
Sbjct: 65  GKHRLSAAIARLDQELQSLQDELNELETMEPASAACQGVITSTEGKSDPLLP 116

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BLAST of Tan0022644.1 vs. NCBI nr
Match: XP_038889974.1 (guanine nucleotide-binding protein subunit gamma 3-like [Benincasa hispida] >XP_038889975.1 guanine nucleotide-binding protein subunit gamma 3-like [Benincasa hispida] >XP_038889976.1 guanine nucleotide-binding protein subunit gamma 3-like [Benincasa hispida])

HSP 1 Score: 394.8 bits (1013), Expect = 4.8e-106
Identity = 189/238 (79.41%), Postives = 205/238 (86.13%), Query Frame = 0


Query: 3   TSSSSSLPSLPPPHPKSPPEYPDLYGKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRC 62
           +SSSSS+PSLPPP+PKSPPEYPDLYGKRRQ AK+ M++REIGFL+EELKSTEGL PAS+C
Sbjct: 9   SSSSSSIPSLPPPYPKSPPEYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLQPASKC 68

Query: 63  CKEVADYVVVKSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPC 122
           CKEVA+YV+  SDPLIPTYKKHRRRCQFWKW CGFPCCKLSWICCCCYAGCSIHLEIPPC
Sbjct: 69  CKEVAEYVIANSDPLIPTYKKHRRRCQFWKWFCGFPCCKLSWICCCCYAGCSIHLEIPPC 128

Query: 123 CNCNNPCKCLSCGSCKLPKWKCCGE----------CCSCPTLPRCCSCSCPTMSC----- 182
           CNCNNPCKCL CGSCKLPKW+CCGE          CC+CPTLP+ CSC CPT+SC     
Sbjct: 129 CNCNNPCKCLCCGSCKLPKWQCCGECRECCGQCGHCCTCPTLPQ-CSCLCPTISCSQCCS 188

Query: 183 -FSLP--SCPECPCCECKCKCKCSLGKCPKIQPCCCFGSRSCC-----CCCNPCHLCC 218
            FSLP  SCPECPCCECKCKCKC+LGKCPKI+PCCCFGSRSCC     CCCNPC LCC
Sbjct: 189 NFSLPSCSCPECPCCECKCKCKCTLGKCPKIRPCCCFGSRSCCGCTGNCCCNPCQLCC 245

[Close]

BLAST of Tan0022644.1 vs. NCBI nr
Match: XP_022946452.1 (guanine nucleotide-binding protein subunit gamma 3-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 389.0 bits (998), Expect = 2.6e-104
Identity = 190/237 (80.17%), Postives = 203/237 (85.65%), Query Frame = 0


Query: 4   SSSSSLPSLPPPHPKSPPEYPDLYGKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRCC 63
           +SSSS+PSLPPP+PKSPP+YPDLYGKRRQ AK+ M++REIGFL+EELKSTEGLPPASRCC
Sbjct: 8   ASSSSIPSLPPPYPKSPPQYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLPPASRCC 67

Query: 64  KEVADYVVVKSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 123
           KEVAD+V+  SDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC
Sbjct: 68  KEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 127

Query: 124 NCNNPCKCLSCGSCKLPKWKC------CGECCSCPTLPRCCSCSCPTMSC------FSLP 183
           NCNNPCKCLSCGSCKLPKW+C      CG C +CPTLPR CSC CPT+SC       SLP
Sbjct: 128 NCNNPCKCLSCGSCKLPKWQCCSGCGQCGNCFTCPTLPR-CSCCCPTVSCSQCCSGCSLP 187

Query: 184 SCP--ECPCCECKCKCKCSLGKCPKIQPCCCFG--SRSCC-------CCCNPCHLCC 218
           SC   ECPCCECKCKCKCSLGKCPKIQPCCCFG  SR CC       CCCNPCHLCC
Sbjct: 188 SCSCLECPCCECKCKCKCSLGKCPKIQPCCCFGSSSRGCCGCGCTGNCCCNPCHLCC 243

[Close]

BLAST of Tan0022644.1 vs. NCBI nr
Match: XP_022999343.1 (guanine nucleotide-binding protein subunit gamma 3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 388.3 bits (996), Expect = 4.5e-104
Identity = 190/237 (80.17%), Postives = 203/237 (85.65%), Query Frame = 0


Query: 4   SSSSSLPSLPPPHPKSPPEYPDLYGKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRCC 63
           +SSSS+PSLPPP+PKSPP+YPDLYGKRRQ AK+ M++REIGFL+EELKSTEGLPPASRCC
Sbjct: 8   ASSSSIPSLPPPYPKSPPQYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLPPASRCC 67

Query: 64  KEVADYVVVKSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 123
           KEVAD+V+  SDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC
Sbjct: 68  KEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 127

Query: 124 NCNNPCKCLSCGSCKLPKWKC------CGECCSCPTLPRCCSCSCPTMSC------FSLP 183
           NCNNPCKCLSCGSCKLPKW+C      CG C +CPTL R CSC CPT+SC       SLP
Sbjct: 128 NCNNPCKCLSCGSCKLPKWQCCSGCGQCGNCFTCPTLLR-CSCCCPTISCSQCCSSCSLP 187

Query: 184 --SCPECPCCECKCKCKCSLGKCPKIQPCCCFG--SRSCC-------CCCNPCHLCC 218
             SCPECPCCECKCKCKCSLGKCPKIQPCCCFG  SR CC       CCCNPCHLCC
Sbjct: 188 SCSCPECPCCECKCKCKCSLGKCPKIQPCCCFGSSSRGCCGCGCTGNCCCNPCHLCC 243

[Close]

BLAST of Tan0022644.1 vs. NCBI nr
Match: XP_022946450.1 (guanine nucleotide-binding protein subunit gamma 3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 388.3 bits (996), Expect = 4.5e-104
Identity = 191/246 (77.64%), Postives = 204/246 (82.93%), Query Frame = 0


Query: 4   SSSSSLPSLPPPHPKSPPEYPDLYGKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRCC 63
           +SSSS+PSLPPP+PKSPP+YPDLYGKRRQ AK+ M++REIGFL+EELKSTEGLPPASRCC
Sbjct: 8   ASSSSIPSLPPPYPKSPPQYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLPPASRCC 67

Query: 64  KEVADYVVVKSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 123
           KEVAD+V+  SDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC
Sbjct: 68  KEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 127

Query: 124 NCNNPCKCLSCGSCKLPKWKC------CGECCSCPTLPRC---------CSCSCPTMSC- 183
           NCNNPCKCLSCGSCKLPKW+C      CG C +CPTLPRC         CSC CPT+SC 
Sbjct: 128 NCNNPCKCLSCGSCKLPKWQCCSGCGQCGNCFTCPTLPRCSCCCPTLPGCSCCCPTVSCS 187

Query: 184 -----FSLPSCP--ECPCCECKCKCKCSLGKCPKIQPCCCFG--SRSCC-------CCCN 218
                 SLPSC   ECPCCECKCKCKCSLGKCPKIQPCCCFG  SR CC       CCCN
Sbjct: 188 QCCSGCSLPSCSCLECPCCECKCKCKCSLGKCPKIQPCCCFGSSSRGCCGCGCTGNCCCN 247

[Close]

BLAST of Tan0022644.1 vs. NCBI nr
Match: XP_022999339.1 (guanine nucleotide-binding protein subunit gamma 3-like isoform X1 [Cucurbita maxima] >XP_022999341.1 guanine nucleotide-binding protein subunit gamma 3-like isoform X1 [Cucurbita maxima] >XP_022999342.1 guanine nucleotide-binding protein subunit gamma 3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 387.5 bits (994), Expect = 7.6e-104
Identity = 191/246 (77.64%), Postives = 204/246 (82.93%), Query Frame = 0


Query: 4   SSSSSLPSLPPPHPKSPPEYPDLYGKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRCC 63
           +SSSS+PSLPPP+PKSPP+YPDLYGKRRQ AK+ M++REIGFL+EELKSTEGLPPASRCC
Sbjct: 8   ASSSSIPSLPPPYPKSPPQYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLPPASRCC 67

Query: 64  KEVADYVVVKSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 123
           KEVAD+V+  SDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC
Sbjct: 68  KEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 127

Query: 124 NCNNPCKCLSCGSCKLPKWKC------CGECCSCPTLPRC---------CSCSCPTMSC- 183
           NCNNPCKCLSCGSCKLPKW+C      CG C +CPTL RC         CSC CPT+SC 
Sbjct: 128 NCNNPCKCLSCGSCKLPKWQCCSGCGQCGNCFTCPTLLRCSCCCPTLPGCSCCCPTISCS 187

Query: 184 -----FSLP--SCPECPCCECKCKCKCSLGKCPKIQPCCCFG--SRSCC-------CCCN 218
                 SLP  SCPECPCCECKCKCKCSLGKCPKIQPCCCFG  SR CC       CCCN
Sbjct: 188 QCCSSCSLPSCSCPECPCCECKCKCKCSLGKCPKIQPCCCFGSSSRGCCGCGCTGNCCCN 247

[Close]

BLAST of Tan0022644.1 vs. ExPASy TrEMBL
Match: A0A6J1G3S6 (guanine nucleotide-binding protein subunit gamma 3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450505 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104
Identity = 190/237 (80.17%), Postives = 203/237 (85.65%), Query Frame = 0


Query: 4   SSSSSLPSLPPPHPKSPPEYPDLYGKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRCC 63
           +SSSS+PSLPPP+PKSPP+YPDLYGKRRQ AK+ M++REIGFL+EELKSTEGLPPASRCC
Sbjct: 8   ASSSSIPSLPPPYPKSPPQYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLPPASRCC 67

Query: 64  KEVADYVVVKSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 123
           KEVAD+V+  SDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC
Sbjct: 68  KEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 127

Query: 124 NCNNPCKCLSCGSCKLPKWKC------CGECCSCPTLPRCCSCSCPTMSC------FSLP 183
           NCNNPCKCLSCGSCKLPKW+C      CG C +CPTLPR CSC CPT+SC       SLP
Sbjct: 128 NCNNPCKCLSCGSCKLPKWQCCSGCGQCGNCFTCPTLPR-CSCCCPTVSCSQCCSGCSLP 187

Query: 184 SCP--ECPCCECKCKCKCSLGKCPKIQPCCCFG--SRSCC-------CCCNPCHLCC 218
           SC   ECPCCECKCKCKCSLGKCPKIQPCCCFG  SR CC       CCCNPCHLCC
Sbjct: 188 SCSCLECPCCECKCKCKCSLGKCPKIQPCCCFGSSSRGCCGCGCTGNCCCNPCHLCC 243

[Close]

BLAST of Tan0022644.1 vs. ExPASy TrEMBL
Match: A0A6J1KJF9 (guanine nucleotide-binding protein subunit gamma 3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493745 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.2e-104
Identity = 190/237 (80.17%), Postives = 203/237 (85.65%), Query Frame = 0


Query: 4   SSSSSLPSLPPPHPKSPPEYPDLYGKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRCC 63
           +SSSS+PSLPPP+PKSPP+YPDLYGKRRQ AK+ M++REIGFL+EELKSTEGLPPASRCC
Sbjct: 8   ASSSSIPSLPPPYPKSPPQYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLPPASRCC 67

Query: 64  KEVADYVVVKSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 123
           KEVAD+V+  SDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC
Sbjct: 68  KEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 127

Query: 124 NCNNPCKCLSCGSCKLPKWKC------CGECCSCPTLPRCCSCSCPTMSC------FSLP 183
           NCNNPCKCLSCGSCKLPKW+C      CG C +CPTL R CSC CPT+SC       SLP
Sbjct: 128 NCNNPCKCLSCGSCKLPKWQCCSGCGQCGNCFTCPTLLR-CSCCCPTISCSQCCSSCSLP 187

Query: 184 --SCPECPCCECKCKCKCSLGKCPKIQPCCCFG--SRSCC-------CCCNPCHLCC 218
             SCPECPCCECKCKCKCSLGKCPKIQPCCCFG  SR CC       CCCNPCHLCC
Sbjct: 188 SCSCPECPCCECKCKCKCSLGKCPKIQPCCCFGSSSRGCCGCGCTGNCCCNPCHLCC 243

[Close]

BLAST of Tan0022644.1 vs. ExPASy TrEMBL
Match: A0A6J1G3W8 (guanine nucleotide-binding protein subunit gamma 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450505 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.2e-104
Identity = 191/246 (77.64%), Postives = 204/246 (82.93%), Query Frame = 0


Query: 4   SSSSSLPSLPPPHPKSPPEYPDLYGKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRCC 63
           +SSSS+PSLPPP+PKSPP+YPDLYGKRRQ AK+ M++REIGFL+EELKSTEGLPPASRCC
Sbjct: 8   ASSSSIPSLPPPYPKSPPQYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLPPASRCC 67

Query: 64  KEVADYVVVKSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 123
           KEVAD+V+  SDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC
Sbjct: 68  KEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 127

Query: 124 NCNNPCKCLSCGSCKLPKWKC------CGECCSCPTLPRC---------CSCSCPTMSC- 183
           NCNNPCKCLSCGSCKLPKW+C      CG C +CPTLPRC         CSC CPT+SC 
Sbjct: 128 NCNNPCKCLSCGSCKLPKWQCCSGCGQCGNCFTCPTLPRCSCCCPTLPGCSCCCPTVSCS 187

Query: 184 -----FSLPSCP--ECPCCECKCKCKCSLGKCPKIQPCCCFG--SRSCC-------CCCN 218
                 SLPSC   ECPCCECKCKCKCSLGKCPKIQPCCCFG  SR CC       CCCN
Sbjct: 188 QCCSGCSLPSCSCLECPCCECKCKCKCSLGKCPKIQPCCCFGSSSRGCCGCGCTGNCCCN 247

[Close]

BLAST of Tan0022644.1 vs. ExPASy TrEMBL
Match: A0A6J1KGS0 (guanine nucleotide-binding protein subunit gamma 3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493745 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.7e-104
Identity = 191/246 (77.64%), Postives = 204/246 (82.93%), Query Frame = 0


Query: 4   SSSSSLPSLPPPHPKSPPEYPDLYGKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRCC 63
           +SSSS+PSLPPP+PKSPP+YPDLYGKRRQ AK+ M++REIGFL+EELKSTEGLPPASRCC
Sbjct: 8   ASSSSIPSLPPPYPKSPPQYPDLYGKRRQAAKVQMLEREIGFLEEELKSTEGLPPASRCC 67

Query: 64  KEVADYVVVKSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 123
           KEVAD+V+  SDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC
Sbjct: 68  KEVADHVIANSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 127

Query: 124 NCNNPCKCLSCGSCKLPKWKC------CGECCSCPTLPRC---------CSCSCPTMSC- 183
           NCNNPCKCLSCGSCKLPKW+C      CG C +CPTL RC         CSC CPT+SC 
Sbjct: 128 NCNNPCKCLSCGSCKLPKWQCCSGCGQCGNCFTCPTLLRCSCCCPTLPGCSCCCPTISCS 187

Query: 184 -----FSLP--SCPECPCCECKCKCKCSLGKCPKIQPCCCFG--SRSCC-------CCCN 218
                 SLP  SCPECPCCECKCKCKCSLGKCPKIQPCCCFG  SR CC       CCCN
Sbjct: 188 QCCSSCSLPSCSCPECPCCECKCKCKCSLGKCPKIQPCCCFGSSSRGCCGCGCTGNCCCN 247

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BLAST of Tan0022644.1 vs. ExPASy TrEMBL
Match: A0A0A0LIK7 (G protein gamma domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000110 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.6e-102
Identity = 185/234 (79.06%), Postives = 199/234 (85.04%), Query Frame = 0


Query: 4   SSSSSLPSLPPPHPKSPPEYPDLYGKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRCC 63
           SSSSS  S+PPP+PKSPP+YPDLYGKRRQ AKL M+DREIGFL+EELKSTEGL PAS+CC
Sbjct: 10  SSSSSSSSIPPPYPKSPPQYPDLYGKRRQAAKLQMLDREIGFLEEELKSTEGLQPASKCC 69

Query: 64  KEVADYVVVKSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 123
           KEVADYV+  SDP+IPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC
Sbjct: 70  KEVADYVIANSDPMIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPCC 129

Query: 124 NCNNPCKCLSCGSCKLPKWKCCGE-------CCSCPTLPRCCSCSCPTMSC------FSL 183
           NCNNPCKCLSC SCKLPKW CCGE       CC+CPTLP+ CSC CPT++C      FSL
Sbjct: 130 NCNNPCKCLSCSSCKLPKWLCCGECCGQCGHCCTCPTLPQ-CSCPCPTITCSQCCSHFSL 189

Query: 184 P--SCPECPCCECKCKCKCSLGKCPKIQPCCCFGSRSCC-----CCCNPCHLCC 218
           P  SCPE PCCECKCKCKC+LGKC K+Q CCCFGSRSCC     CCCNPC LCC
Sbjct: 190 PSCSCPEWPCCECKCKCKCTLGKCLKVQHCCCFGSRSCCGCSGNCCCNPCQLCC 242

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BLAST of Tan0022644.1 vs. TAIR 10
Match: AT5G20635.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: keratin filament, chloroplast; CONTAINS InterPro DOMAIN/s: Keratin, high sulphur B2 protein (InterPro:IPR002494); Has 6153 Blast hits to 2882 proteins in 265 species: Archae - 6; Bacteria - 47; Metazoa - 4777; Fungi - 68; Plants - 187; Viruses - 30; Other Eukaryotes - 1038 (source: NCBI BLink). )

HSP 1 Score: 184.9 bits (468), Expect = 7.0e-47
Identity = 121/239 (50.63%), Postives = 142/239 (59.41%), Query Frame = 0


Query: 3   TSSSSSLPSLPPPHPKSPPEYPDLYGKRRQTAKLHMIDREIGFLQEELKSTEGLPPASRC 62
           +SSS +  SLPPP PKSPPEYPDLYGKRR+ A++ M++REIGFL+ E+K  EG+ PASRC
Sbjct: 21  SSSSLAPSSLPPPRPKSPPEYPDLYGKRREAARVQMLEREIGFLEGEIKFIEGVQPASRC 80

Query: 63  CKEVADYVVVKSDPLIPTYKKHRRRCQFWKWLCGFPCCKLSWICCCCYAGCSIHLEIPPC 122
            KEV+D+VV  SDPLIP  +K RR  +FWKWLCG PC  L   CCCC + CS HL  P C
Sbjct: 81  IKEVSDFVVANSDPLIPAQRKSRRSFRFWKWLCG-PCLSLVSFCCCCQSKCSCHLRKPKC 140

Query: 123 CNCNNPCKCLSCGSCKLPKWKCCGECCSCPTL--PRC-----CSCSCPTMSCFSLPSC-- 182
           CNC + C C+    C      CC   C CP L  P C     C CSCP MSC  +PSC  
Sbjct: 141 CNCTS-CSCIGSKCC---DGSCCSNICCCPRLSCPSCSCFRGCWCSCPDMSC-CIPSCFR 200

Query: 183 ------PEC------PCCECKCKCK-CSLGKCPKIQPC-CCFGSRSCCCCCNPCHLCCC 219
                 P C       CC C CK +  S   CPK++ C CCF     C C N C   CC
Sbjct: 201 SCSCTRPSCLNKKKSSCCSCNCKIRWSSCFSCPKVRLCSCCF-----CNCKNLCSNPCC 248

The following BLAST results are available for this feature:

BLAST of Tan0022644.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AWT8	9.8e-46	50.63	Guanine nucleotide-binding protein subunit gamma 3 OS=Arabidopsis thaliana OX=37...	[more]
A2X0N9	3.2e-04	42.31	Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. indica...	[more]
Q6YXX9	3.2e-04	42.31	Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. japoni...	[more]

BLAST of Tan0022644.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889974.1	4.8e-106	79.41	guanine nucleotide-binding protein subunit gamma 3-like [Benincasa hispida] >XP_...	[more]
XP_022946452.1	2.6e-104	80.17	guanine nucleotide-binding protein subunit gamma 3-like isoform X2 [Cucurbita mo...	[more]
XP_022999343.1	4.5e-104	80.17	guanine nucleotide-binding protein subunit gamma 3-like isoform X2 [Cucurbita ma...	[more]
XP_022946450.1	4.5e-104	77.64	guanine nucleotide-binding protein subunit gamma 3-like isoform X1 [Cucurbita mo...	[more]
XP_022999339.1	7.6e-104	77.64	guanine nucleotide-binding protein subunit gamma 3-like isoform X1 [Cucurbita ma...	[more]

BLAST of Tan0022644.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3S6	1.3e-104	80.17	guanine nucleotide-binding protein subunit gamma 3-like isoform X2 OS=Cucurbita ...	[more]
A0A6J1KJF9	2.2e-104	80.17	guanine nucleotide-binding protein subunit gamma 3-like isoform X2 OS=Cucurbita ...	[more]
A0A6J1G3W8	2.2e-104	77.64	guanine nucleotide-binding protein subunit gamma 3-like isoform X1 OS=Cucurbita ...	[more]
A0A6J1KGS0	3.7e-104	77.64	guanine nucleotide-binding protein subunit gamma 3-like isoform X1 OS=Cucurbita ...	[more]
A0A0A0LIK7	2.6e-102	79.06	G protein gamma domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G00...	[more]

BLAST of Tan0022644.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20635.1	7.0e-47	50.63	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01224	G_gamma_2	coord: 32..102 e-value: 1.6E-7 score: 41.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR32378:SF10	GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 3	coord: 3..217
None	No IPR available	PANTHER	PTHR32378	GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 3	coord: 3..217
IPR015898	G-protein gamma-like domain	PFAM	PF00631	G-gamma	coord: 39..100 e-value: 2.4E-11 score: 43.5

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0022644	Tan0022644	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0022644.1-exon	Tan0022644.1-exon-LG08:404101..404241	exon
Tan0022644.1-exon	Tan0022644.1-exon-LG08:404657..404709	exon
Tan0022644.1-exon	Tan0022644.1-exon-LG08:404837..404881	exon
Tan0022644.1-exon	Tan0022644.1-exon-LG08:404964..405008	exon
Tan0022644.1-exon	Tan0022644.1-exon-LG08:405317..405689	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0022644.1-cds	Tan0022644.1-cds-LG08:404101..404241	CDS
Tan0022644.1-cds	Tan0022644.1-cds-LG08:404657..404709	CDS
Tan0022644.1-cds	Tan0022644.1-cds-LG08:404837..404881	CDS
Tan0022644.1-cds	Tan0022644.1-cds-LG08:404964..405008	CDS
Tan0022644.1-cds	Tan0022644.1-cds-LG08:405317..405689	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0022644.1	Tan0022644.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G protein-coupled receptor signaling pathway