Tan0021847.2 (mRNA) Snake gourd v1

Overview


Name	Tan0021847.2
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like
Location	LG06: 2032292 .. 2036097 (+)
Sequence length	1223
RNA-Seq Expression	Tan0021847.2
Synteny	Tan0021847.2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTCAGTTTACTTCTAATCACTTCGTCACTTTTGGCTCTGTATAATTTCTTCTGTTTGTGCTGATGGAGTTTCGAAATTCGTCAATGGATTTGGATGATTCTCCATTCGAATTCACACTAGCTGAGGCAAGTTCTTGTGTTAAGTTTGAGTTGGTGTCTTCCAATCAATGCTTCCGAGTCCAGTTTCCCTGTTCGAGTTTTGCGCAGAAATTCCATTTCTGCGTTTTCTGAATGAAATTACCGATTTCGATTTTGTATTCGATTTCATTGTGTCAATAATTCTACAGATTGTGGAGATGGACAATATCTTAAAGGACTCTGGAGATCAAACACTTGGTCAAGAGTTTTTCCAAGATGTCGCTCTTCATTTCAGGTAATAGAGCTTTGATCGCTTCTTTCAACAGGTATGTATGTAATCAATCATCGTGTTTTTCTTTTCACGTTGGCTCCTTCTTGCAGTTGCTCCCCATGGCGCGCTGGAAAATCTCCCGTCACTGCAGAACAGGTCTTCAATTTTTTTCTTATCCACATTCTAGTCTGTTCGTTGTTTTTATTGATATTTGGTAATTCTTATGTGCCCTAGGTACAAGGTTGGTTTGAGAATCGGAAAAATGAATTGCGAAGTAGTAGCAAAAAAGCGCGGCCTCCACCTCCACCTCCACCTCGTCCTCCACCATCACCTCCGCCTCCGACTCCGCCACCGAAACTTTTGCTTTATCATTCGGATAGTACTTTTTTAACTGACGCACCTTCATCTGAACCACCTGAAAGTTTTCCTCAATTCAAAGGTAAATTCCGCATCTCCGCCTTACGAATTTTAGAAATTCTATCTGAAATTCTCCTCGATAATGCAATGTAACAAGCAATTGCTACGGTTATTGGTGTGTACATTGTTTTATATCTTCTGGCTCTACAATGGTTTTCTTTTCTTTTCCTGCACGATACTACTAGGCTGAGAGTGGGAGGGTCTGCACAGTAATTGAAAACCCATTCGTGCCTAGAATTATTTTAGTAGCTGCATGCACAATGATTGGTAATTTCTTCGTGCTTAGATTATCAAACCCTTTATCAAGTGATTTTAAGTGGAAAAAACTGTAGGTGATTAATCTTGAAACTCACAAATCATCGTAGTTCTGACTGCATGTTAGTCTACGCTTAGCAGACAAGTAGGATCGCTGCAATTCTGGTTAGTGCTTCTTGCATTACTGAGCATATCTAGAGCTTCTGCATTCTGCTGCTTATAGTATTGGTGTACAACAACAAACTTGGGGGTTCTTGTTGAGAAAACCTAACCCTGATGGTTTCAACTTTCAACTTGTGCCGTTTTGATGCCACAATCCTGTGTTCAAACCTTTTCTGAATGGTGGTATCGAGGCTGAATCAGGAAGTAAGTTCAAATCATAACTGATAACACACACATTGAATTGAAAACTGCAGTGTGTCCTTTCATGATTTGAGCTTTAGCCAAGATACTATAATTTGCAGTTCTGCAGTAATTTTCACTCTTATGCGTGTTGGCAAACTTGAAATCTTTCCAGCTCCAAATTGAACTACTAACTTTTTGTTATATCTTTACTTGAAAAGTTCATGCAGGCAAGGCAACTGATCTTTCAGAATTGGCATTTGAAGCCTTTTCGTCAAGAGACAATGCATGGTGAGAAAAATATAGAGCAGAAATACAAAACTGTTACATTGGCATTATCTGCGATGGAATGATATGCTCATATTCATACAAGCACAATTTCTAGGGATTATAAGCTGTAATTGACATCTTTGAATCCATTGAAATACATCAGGTAGATGATAACCGCTCCTTAGTGAAATGTAGTGCCTCGAGTTTAGCTACCATAATCCTAACATTATACAAGTGCCTTGCGTTTATTTTCATTTCACAGTTGGGAAAACTAGTGGATGACCAATCTTCGTATAAATGATGCTAACACCCCAGACATCTATTACTTGCAGTCATTCAGTATGTTACACCCTTGAGCTTGATAATGATGTGCCGAAGACTGTCATTCAGTTAAGATCCTTTAAGAAAGCTTTGCAAAAGTCAGGATGTAGGTTTCTGAGCCCCACAGAGTTAGAACAACGTTTAGAAAGTAGTTGAAAGTTGACCGTAATGGTATTTACATGGTAACTTCCGTACAAGTGTGTTAATAACCAGATTTTGACTTGTATACTCAAATTCTTATCTTCATGCCAACGTAAACCACATGTTTCATGGTCACTATTAGGAGCTATATTGTCCATACCATAAAATCTCTAGCATTATTTCCTCCTTCCACTAACCCATAATGTTCATGTTTAGTTATCTTGCAATATGATCAGTTAGTATGATTGTTGAGATAGTATCTACTATTGTTGATATATGTTATATAGCATAGGTTATGGGCTAATATATCAGTATCTTGTGGGAATATTTAAAGACGTGACTGTTAAAGTATCAACTTAATGGTTTACCCATTGATACTTGAAGAAGCACATTATTCTGCTTTCAGCAAGCACTCTTACTTGCACGATCAGTTTTGGTTAAGACTCCATGATTTTTTTGTTGTGGAATTGAAGAATCTTACTAATGTTTCTTTTGATTCCTTAGGTATGACGTTGCTTCATTCCTTACTTACAGAGTTAATTGCCATGGAGAACTGGTAAGATTTTCCCACATAAATCATATACTTCTTTAGACAGTTTCTGTAGATTGCAAAATGACACAGAATACTTGATAATTTTCCACTCTCTGTGGTTTATTATCATAAACCATAGAAAAAAGTTAGCAGATCTTTTAACGTTGATCTTTATGCTTTTTATATTATTGCATTGGAATAAACTTCACAGGAAGCTCGAGTTCGATATACTGGCTTTGGAAAGGATGAGGATGAGTGGGTGAATGTTGCAAGAGGAGTGCGTGATCGGTCCATACCTTTAGAATCTTCAGAGTGTTACAGAGTAAAAGTTGGAGATCTTGTGTTATGCTACCGGGTAATTTCTGTCCTAGTTTGCTCCTTCCAAAGTTGTTTTTTTTAGTGAGGGGATGTGCAAAGGCTTCTAGCACCAAAATAGTCTATAGTTACCAGAAATGTTTCGTACTAAACTATAATGCTTATAATAGAAAGTGGGAAAGAAATCCATAGGGCTGAGATAAATGTTCTCATATCATGTACTTACCTCAGATGATTTTATGGCATATTTACAGGAAGGACAAGATCACGCACTCTACTTCGATGCATATGTTGTGGAAATTCAGAGGAGGCTGCATGATATTGGAGGTTGCCGATGCATATTCGTCGTACGCTATGACCATGATCACTGCGAGGTATGTACTATGACAGAAATGTCACTGAAAGTATGTGAGCGACCCAATTTTAGATTATTCTCTAACTTGCATGAAATGAGAATACTCTAAATTCTAATGGTGCCTTCTTTGTTTAGGAAAAAGTGCATTTAGGGAGATTGTGCTGCCGGCCTTCATCGTACAACTCAGACCAACTTTAATGTTAACGAAATGCCTGAATCTACATCCCTCGGAAAAAAAGTAATATTTAAAGATTTTGTTGCTTGGAATTTACTGAAAAAATTTGTTTGCATATGCAACAGATCAGAATGAGGAATTGAGAATCGTCCATGTTCCGGGACAGTACGAGGAATTGAGAACCAACCCAGTCTGTTAGTAATTATTATGTTTAGTAACGATTATGTAACCTTATTTAAAAAAGGGGGTTAAAAATACCATTTTTGTCTTCGTATTTTGAATTTCATTTTAATTTAGTCTGCCCGAGTACTTTTTATAAAGCTTAAAATCAG

mRNA sequence

CTTCTCAGTTTACTTCTAATCACTTCGTCACTTTTGGCTCTGTATAATTTCTTCTGTTTGTGCTGATGGAGTTTCGAAATTCGTCAATGGATTTGGATGATTCTCCATTCGAATTCACACTAGCTGAGATTGTGGAGATGGACAATATCTTAAAGGACTCTGGAGATCAAACACTTGGTCAAGAGTTTTTCCAAGATGTCGCTCTTCATTTCAGTTGCTCCCCATGGCGCGCTGGAAAATCTCCCGTCACTGCAGAACAGGTACAAGGTTGGTTTGAGAATCGGAAAAATGAATTGCGAAGTAGTAGCAAAAAAGCGCGGCCTCCACCTCCACCTCCACCTCGTCCTCCACCATCACCTCCGCCTCCGACTCCGCCACCGAAACTTTTGCTTTATCATTCGGATAGTACTTTTTTAACTGACGCACCTTCATCTGAACCACCTGAAAGTTTTCCTCAATTCAAAGTTCATGCAGGCAAGGCAACTGATCTTTCAGAATTGGCATTTGAAGCCTTTTCGTCAAGAGACAATGCATGGTATGACGTTGCTTCATTCCTTACTTACAGAGTTAATTGCCATGGAGAACTGGAAGCTCGAGTTCGATATACTGGCTTTGGAAAGGATGAGGATGAGTGGGTGAATGTTGCAAGAGGAGTGCGTGATCGGTCCATACCTTTAGAATCTTCAGAGTGTTACAGAGTAAAAGTTGGAGATCTTGTGTTATGCTACCGGGAAGGACAAGATCACGCACTCTACTTCGATGCATATGTTGTGGAAATTCAGAGGAGGCTGCATGATATTGGAGGTTGCCGATGCATATTCGTCGTACGCTATGACCATGATCACTGCGAGGAAAAAGTGCATTTAGGGAGATTGTGCTGCCGGCCTTCATCGTACAACTCAGACCAACTTTAATGTTAACGAAATGCCTGAATCTACATCCCTCGGAAAAAAAGTAATATTTAAAGATTTTGTTGCTTGGAATTTACTGAAAAAATTTGTTTGCATATGCAACAGATCAGAATGAGGAATTGAGAATCGTCCATGTTCCGGGACAGTACGAGGAATTGAGAACCAACCCAGTCTGTTAGTAATTATTATGTTTAGTAACGATTATGTAACCTTATTTAAAAAAGGGGGTTAAAAATACCATTTTTGTCTTCGTATTTTGAATTTCATTTTAATTTAGTCTGCCCGAGTACTTTTTATAAAGCTTAAAATCAG

Coding sequence (CDS)

ATGGAGTTTCGAAATTCGTCAATGGATTTGGATGATTCTCCATTCGAATTCACACTAGCTGAGATTGTGGAGATGGACAATATCTTAAAGGACTCTGGAGATCAAACACTTGGTCAAGAGTTTTTCCAAGATGTCGCTCTTCATTTCAGTTGCTCCCCATGGCGCGCTGGAAAATCTCCCGTCACTGCAGAACAGGTACAAGGTTGGTTTGAGAATCGGAAAAATGAATTGCGAAGTAGTAGCAAAAAAGCGCGGCCTCCACCTCCACCTCCACCTCGTCCTCCACCATCACCTCCGCCTCCGACTCCGCCACCGAAACTTTTGCTTTATCATTCGGATAGTACTTTTTTAACTGACGCACCTTCATCTGAACCACCTGAAAGTTTTCCTCAATTCAAAGTTCATGCAGGCAAGGCAACTGATCTTTCAGAATTGGCATTTGAAGCCTTTTCGTCAAGAGACAATGCATGGTATGACGTTGCTTCATTCCTTACTTACAGAGTTAATTGCCATGGAGAACTGGAAGCTCGAGTTCGATATACTGGCTTTGGAAAGGATGAGGATGAGTGGGTGAATGTTGCAAGAGGAGTGCGTGATCGGTCCATACCTTTAGAATCTTCAGAGTGTTACAGAGTAAAAGTTGGAGATCTTGTGTTATGCTACCGGGAAGGACAAGATCACGCACTCTACTTCGATGCATATGTTGTGGAAATTCAGAGGAGGCTGCATGATATTGGAGGTTGCCGATGCATATTCGTCGTACGCTATGACCATGATCACTGCGAGGAAAAAGTGCATTTAGGGAGATTGTGCTGCCGGCCTTCATCGTACAACTCAGACCAACTTTAA

Protein sequence

MEFRNSSMDLDDSPFEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVQGWFENRKNELRSSSKKARPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTFLTDAPSSEPPESFPQFKVHAGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEARVRYTGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDHCEEKVHLGRLCCRPSSYNSDQL

Homology

[Close]

BLAST of Tan0021847.2 vs. ExPASy Swiss-Prot
Match: Q9XI47 (Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE=1 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 7.7e-59
Identity = 124/259 (47.88%), Postives = 173/259 (66.80%), Query Frame = 0


Query: 16  EFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVQGWFENRKN 75
           EFTL+EIV+M+N+ K+ GDQ+L ++F Q VA  FSCS  R GKS +T +QVQ WF+ +  
Sbjct: 13  EFTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEK-- 72

Query: 76  ELRSSSKKARPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTFLTDAPSSEPPESFPQFKVH 135
            L+  S+            P S   P+PP ++    + S++ ++A ++    +    +  
Sbjct: 73  -LKHQSQ------------PKSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTR 132

Query: 136 AGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEARVRYTGFGKDEDEWVNVAR 195
            GKA+DL++LAFEA S+RD AWYDV+SFLTYRV   GELE RVR++GF    DEWVNV  
Sbjct: 133 KGKASDLADLAFEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKT 192

Query: 196 GVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVR 255
            VR+RSIP+E SEC RV VGDL+LC++E +D ALY D +V+ I+R +HD   C C+F+VR
Sbjct: 193 SVRERSIPVEPSECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVR 252

Query: 256 YDHDHCEEKVHLGRLCCRP 275
           Y+ D+ EE + L R+C RP
Sbjct: 253 YELDNTEESLGLERICRRP 256

[Close]

BLAST of Tan0021847.2 vs. ExPASy Swiss-Prot
Match: Q8RWJ7 (Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 5.7e-46
Identity = 119/276 (43.12%), Postives = 155/276 (56.16%), Query Frame = 0


Query: 15  FEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVQGWFENRK 74
           F F L E+ EM+ IL        G+   + +A  FS SP R GK  V  +Q+  WF+NR+
Sbjct: 12  FRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRR 71

Query: 75  NELRSSSKKA-------RPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTFLTDAPSSEPPE 134
             LR+   KA         P    P    S   P   PK      +   +T APS     
Sbjct: 72  YALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSG---- 131

Query: 135 SFPQFKVHAGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEARVRYTGFGKDE 194
           S     + +G  +D S L FEA S+RD AWYDV +FL +R    G+ E +VR+ GF  +E
Sbjct: 132 SLVPGVMRSG--SDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEE 191

Query: 195 DEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGG 254
           DEW+NV + VR RS+P E+SEC  V  GDLVLC++EG+D ALYFDA V++ QRR HD+ G
Sbjct: 192 DEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRG 251

Query: 255 CRCIFVVRYDHDHCEEKVHLGRLCCRP-SSYNSDQL 283
           CRC F+VRY HD  EE V L ++C RP + Y   QL
Sbjct: 252 CRCRFLVRYSHDQSEEIVPLRKICRRPETDYRLQQL 281

[Close]

BLAST of Tan0021847.2 vs. NCBI nr
Match: XP_038897963.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Benincasa hispida])

HSP 1 Score: 511.5 bits (1316), Expect = 4.5e-141
Identity = 254/282 (90.07%), Postives = 263/282 (93.26%), Query Frame = 0


Query: 1   MEFRNSSMDLDDSPFEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSP 60
           M++RNSS  LDDSPFEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSP
Sbjct: 1   MDYRNSSSVLDDSPFEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSP 60

Query: 61  VTAEQVQGWFENRKNELRSSSKKARPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTFLTDA 120
           VTAEQV GWFENRK EL +S KKARPPPPPP  PPPSPPPPTPPPKLLLYHS+S FLTDA
Sbjct: 61  VTAEQVHGWFENRKMELLTSCKKARPPPPPPLPPPPSPPPPTPPPKLLLYHSESDFLTDA 120

Query: 121 PSSEPPESFPQFKVHAGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEARVRY 180
           PSSEPPE    FK   GKATDLSELAFEAFSSRD+AWYDVASFL+YRVNCHGEL+ARVRY
Sbjct: 121 PSSEPPE----FK---GKATDLSELAFEAFSSRDHAWYDVASFLSYRVNCHGELDARVRY 180

Query: 181 TGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQR 240
            GFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQR
Sbjct: 181 AGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQR 240

Query: 241 RLHDIGGCRCIFVVRYDHDHCEEKVHLGRLCCRPSSYNSDQL 283
           RLHDIGGCRCIFVVRYDHD  EEKVHLGRLCCRPS+YNSDQ+
Sbjct: 241 RLHDIGGCRCIFVVRYDHDDYEEKVHLGRLCCRPSAYNSDQI 275

[Close]

BLAST of Tan0021847.2 vs. NCBI nr
Match: XP_023514197.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 508.1 bits (1307), Expect = 5.0e-140
Identity = 254/290 (87.59%), Postives = 266/290 (91.72%), Query Frame = 0


Query: 1   MEFRNSSMDLDDSPFEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSP 60
           MEFRNSS DLDDS FEFTLAEIVEMD+IL++SGDQTLGQ+FFQDVALHFSCSPWRA KSP
Sbjct: 5   MEFRNSSTDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 64

Query: 61  VTAEQVQGWFENRKNELR----SSSKKARPPPPPPPRPPPSP----PPPTPPPKLLLYHS 120
           VTAEQVQ WFENRK E R    SSSKKARPPPPPPP PPP P    PPPTPPPKLLLYHS
Sbjct: 65  VTAEQVQSWFENRKKESRSSSTSSSKKARPPPPPPPPPPPPPPLSSPPPTPPPKLLLYHS 124

Query: 121 DSTFLTDAPSSEPPESFPQFKVHAGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHG 180
           DS FLTD P+SEPP+SFP+FK   GKATDLSELAFEAFSSRDNAWYDVASFLTYRVN HG
Sbjct: 125 DSAFLTDIPASEPPDSFPEFK---GKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHG 184

Query: 181 ELEARVRYTGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFD 240
           EL+ARVRYTGFGKDEDEWVNVARGVR+RSIPLESSEC+RVKVGDLVLCYREGQDHALYFD
Sbjct: 185 ELDARVRYTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFD 244

Query: 241 AYVVEIQRRLHDIGGCRCIFVVRYDHDHCEEKVHLGRLCCRPSSYNSDQL 283
           AYVVEIQRRLHD GGCRCIFVVRY+HDH EEKVHLGRLCCRPS+YNSDQL
Sbjct: 245 AYVVEIQRRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 291

[Close]

BLAST of Tan0021847.2 vs. NCBI nr
Match: KAG6593488.1 (Protein SAWADEE HOMEODOMAIN-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 506.5 bits (1303), Expect = 1.5e-139
Identity = 252/286 (88.11%), Postives = 264/286 (92.31%), Query Frame = 0


Query: 1   MEFRNSSMDLDDSPFEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSP 60
           MEFRN S DLDDS FEFTLAEIVEMD+IL++SGDQTLGQ+FFQDVALHFSCSPWRA KSP
Sbjct: 1   MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60

Query: 61  VTAEQVQGWFENRKNELR----SSSKKARPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTF 120
           VTAEQVQ WFENRK E R    SSSKKARPPPPPPP PP S PPPTPPPKLLLYHSDS F
Sbjct: 61  VTAEQVQSWFENRKKESRSSSTSSSKKARPPPPPPPPPPLSSPPPTPPPKLLLYHSDSAF 120

Query: 121 LTDAPSSEPPESFPQFKVHAGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEA 180
           LTD P+SEPP+SFP+FK   GKATDLSELAFEAFSSRDNAWYDVASFLTYRVN HGEL+A
Sbjct: 121 LTDIPASEPPDSFPEFK---GKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDA 180

Query: 181 RVRYTGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVV 240
           RVRYTGFGKDEDEWVNVARGVR+RSIPLESSEC+RVKVGDLVLCYREGQDHALYFDAYVV
Sbjct: 181 RVRYTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVV 240

Query: 241 EIQRRLHDIGGCRCIFVVRYDHDHCEEKVHLGRLCCRPSSYNSDQL 283
           EIQRRLHD GGCRCIFVVRY+HDH EEKVHLGRLCCRPS+YNSDQL
Sbjct: 241 EIQRRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 283

[Close]

BLAST of Tan0021847.2 vs. NCBI nr
Match: XP_022964467.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucurbita moschata])

HSP 1 Score: 503.1 bits (1294), Expect = 1.6e-138
Identity = 250/286 (87.41%), Postives = 263/286 (91.96%), Query Frame = 0


Query: 1   MEFRNSSMDLDDSPFEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSP 60
           MEFRNSS D+DDS FEFTLAEIVEMD+IL++SGDQTLGQ+FFQDVALHFSCSPWRA KSP
Sbjct: 1   MEFRNSSSDIDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60

Query: 61  VTAEQVQGWFENRKNELR----SSSKKARPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTF 120
           VTAEQVQ WFENRK E R    SSSKK RPPPPPPP PP S PPPTPPPKLLLYHSDS F
Sbjct: 61  VTAEQVQSWFENRKKESRSSSTSSSKKPRPPPPPPPPPPLSSPPPTPPPKLLLYHSDSAF 120

Query: 121 LTDAPSSEPPESFPQFKVHAGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEA 180
           LTD P+SEPP+S P+FK   GKATDLSELAFEAFSSRDNAWYDVASFLTYRVN HGEL+A
Sbjct: 121 LTDIPASEPPDSSPEFK---GKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDA 180

Query: 181 RVRYTGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVV 240
           RVRYTGFGKDEDEWVNVARGVR+RSIPLESSEC+RVKVGDLVLCYREGQDHALYFDAYVV
Sbjct: 181 RVRYTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVV 240

Query: 241 EIQRRLHDIGGCRCIFVVRYDHDHCEEKVHLGRLCCRPSSYNSDQL 283
           EIQRRLHD GGCRCIFVVRY+HDH EEKVHLGRLCCRPS+YNSDQL
Sbjct: 241 EIQRRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 283

[Close]

BLAST of Tan0021847.2 vs. NCBI nr
Match: KAG7025835.1 (Protein SAWADEE HOMEODOMAIN-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 501.1 bits (1289), Expect = 6.1e-138
Identity = 251/286 (87.76%), Postives = 263/286 (91.96%), Query Frame = 0


Query: 1   MEFRNSSMDLDDSPFEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSP 60
           MEFRN S DLDDS FEFTLAEIVEMD+IL++SGDQTLGQ+FFQDVALHFSCSPWRA KSP
Sbjct: 1   MEFRNLSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60

Query: 61  VTAEQVQGWFENRKNELR----SSSKKARPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTF 120
           VTAEQVQ WFENRK E R    SSSKKARPPPPPP  PP S PPPTPPPKLLLYHSDS F
Sbjct: 61  VTAEQVQSWFENRKKESRSSSTSSSKKARPPPPPP--PPLSSPPPTPPPKLLLYHSDSAF 120

Query: 121 LTDAPSSEPPESFPQFKVHAGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEA 180
           LTD P+SEPP+SFP+FK   GKATDLSELAFEAFSSRDNAWYDVASFLTYRVN HGEL+A
Sbjct: 121 LTDIPASEPPDSFPEFK---GKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDA 180

Query: 181 RVRYTGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVV 240
           RVRYTGFGKDEDEWVNVARGVR+RSIPLESSEC+RVKVGDLVLCYREGQDHALYFDAYVV
Sbjct: 181 RVRYTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVV 240

Query: 241 EIQRRLHDIGGCRCIFVVRYDHDHCEEKVHLGRLCCRPSSYNSDQL 283
           EIQRRLHD GGCRCIFVVRY+HDH EEKVHLGRLCCRPS+YNSDQL
Sbjct: 241 EIQRRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 281

[Close]

BLAST of Tan0021847.2 vs. ExPASy TrEMBL
Match: A0A6J1HHW3 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Cucurbita moschata OX=3662 GN=LOC111464481 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 7.8e-139
Identity = 250/286 (87.41%), Postives = 263/286 (91.96%), Query Frame = 0


Query: 1   MEFRNSSMDLDDSPFEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSP 60
           MEFRNSS D+DDS FEFTLAEIVEMD+IL++SGDQTLGQ+FFQDVALHFSCSPWRA KSP
Sbjct: 1   MEFRNSSSDIDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60

Query: 61  VTAEQVQGWFENRKNELR----SSSKKARPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTF 120
           VTAEQVQ WFENRK E R    SSSKK RPPPPPPP PP S PPPTPPPKLLLYHSDS F
Sbjct: 61  VTAEQVQSWFENRKKESRSSSTSSSKKPRPPPPPPPPPPLSSPPPTPPPKLLLYHSDSAF 120

Query: 121 LTDAPSSEPPESFPQFKVHAGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEA 180
           LTD P+SEPP+S P+FK   GKATDLSELAFEAFSSRDNAWYDVASFLTYRVN HGEL+A
Sbjct: 121 LTDIPASEPPDSSPEFK---GKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDA 180

Query: 181 RVRYTGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVV 240
           RVRYTGFGKDEDEWVNVARGVR+RSIPLESSEC+RVKVGDLVLCYREGQDHALYFDAYVV
Sbjct: 181 RVRYTGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVV 240

Query: 241 EIQRRLHDIGGCRCIFVVRYDHDHCEEKVHLGRLCCRPSSYNSDQL 283
           EIQRRLHD GGCRCIFVVRY+HDH EEKVHLGRLCCRPS+YNSDQL
Sbjct: 241 EIQRRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 283

[Close]

BLAST of Tan0021847.2 vs. ExPASy TrEMBL
Match: A0A6J1KFQ7 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Cucurbita maxima OX=3661 GN=LOC111494637 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 3.9e-138
Identity = 248/286 (86.71%), Postives = 264/286 (92.31%), Query Frame = 0


Query: 1   MEFRNSSMDLDDSPFEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSP 60
           MEF++SS DLDDS FEFTLAEIVEMD+IL++SGDQTLGQ+FFQDVALHFSCSPWRA KSP
Sbjct: 1   MEFKSSSSDLDDSVFEFTLAEIVEMDSILRESGDQTLGQQFFQDVALHFSCSPWRAEKSP 60

Query: 61  VTAEQVQGWFENRKNELR----SSSKKARPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTF 120
           VTAEQVQ WFENRK E R    SSSKKARPPP PPP PP S PPPTPPPKLLLYHSDS F
Sbjct: 61  VTAEQVQSWFENRKKESRSSSTSSSKKARPPPSPPPPPPLSSPPPTPPPKLLLYHSDSAF 120

Query: 121 LTDAPSSEPPESFPQFKVHAGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEA 180
           LTD P+SEPP+SFP+FK   GKATDLSELAFEAFSSRDNAWYDVASFLTYRVN HGEL+A
Sbjct: 121 LTDIPASEPPDSFPEFK---GKATDLSELAFEAFSSRDNAWYDVASFLTYRVNYHGELDA 180

Query: 181 RVRYTGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVV 240
           RVRY+GFGKDEDEWVNVARGVR+RSIPLESSEC+RVKVGDLVLCYREGQDHALYFDAYV+
Sbjct: 181 RVRYSGFGKDEDEWVNVARGVRERSIPLESSECHRVKVGDLVLCYREGQDHALYFDAYVI 240

Query: 241 EIQRRLHDIGGCRCIFVVRYDHDHCEEKVHLGRLCCRPSSYNSDQL 283
           EIQRRLHD GGCRCIFVVRY+HDH EEKVHLGRLCCRPS+YNSDQL
Sbjct: 241 EIQRRLHDTGGCRCIFVVRYEHDHYEEKVHLGRLCCRPSAYNSDQL 283

[Close]

BLAST of Tan0021847.2 vs. ExPASy TrEMBL
Match: A0A6J1DBC4 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Momordica charantia OX=3673 GN=LOC111018742 PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.6e-136
Identity = 244/279 (87.46%), Postives = 260/279 (93.19%), Query Frame = 0


Query: 1   MEFRNSSMDLDDSPFEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSP 60
           ME+R+   DLDD PFEFTLAEIVEMDNILKD+GDQTLGQEFFQDVALHFSCSPWRAGKS 
Sbjct: 1   MEYRSLPKDLDDYPFEFTLAEIVEMDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSS 60

Query: 61  VTAEQVQGWFENRKNELRSSSKKARPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTFLTDA 120
           VTAEQV+GWFENR+NELRSSSKKA     PPP PPPSPPPP PPPKLLLYHSDS+FLTDA
Sbjct: 61  VTAEQVKGWFENRQNELRSSSKKA-----PPPPPPPSPPPP-PPPKLLLYHSDSSFLTDA 120

Query: 121 PSSEPPESFPQFKVHAGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEARVRY 180
           PSSEPP+S P+ K   GKA+DLSELAFEAFSSRDNAWYDVASFL+YRVNCHGEL+ARVRY
Sbjct: 121 PSSEPPDSLPELK---GKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRY 180

Query: 181 TGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQR 240
            GFGKDEDEWVNVARGVR+RSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQR
Sbjct: 181 AGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQR 240

Query: 241 RLHDIGGCRCIFVVRYDHDHCEEKVHLGRLCCRPSSYNS 280
           RLHDIGGCRCIFVVRYDHD+ EEKVHLGRLCCRP++YN+
Sbjct: 241 RLHDIGGCRCIFVVRYDHDNHEEKVHLGRLCCRPAAYNN 270

[Close]

BLAST of Tan0021847.2 vs. ExPASy TrEMBL
Match: A0A1S3CIG7 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500784 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 7.5e-134
Identity = 244/286 (85.31%), Postives = 256/286 (89.51%), Query Frame = 0


Query: 1   MEFRNSSMDLDDSPFEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSP 60
           ME   SS  LDDS FEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRA KSP
Sbjct: 1   MEHPKSSKLLDDSSFEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAAKSP 60

Query: 61  VTAEQVQGWFENRKNELRSSSKKARPPPPPPPRP--PPSP--PPPTPPPKLLLYHSDSTF 120
           VTAE V  WFENR+ ELRSSSKKARPPPPPPP P  PPSP  PPPTPPPKLLLYHS+S F
Sbjct: 61  VTAEHVHAWFENRRKELRSSSKKARPPPPPPPPPELPPSPSSPPPTPPPKLLLYHSESDF 120

Query: 121 LTDAPSSEPPESFPQFKVHAGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEA 180
           LT APSSEPPE         GKATDLSELAFEAFSSRD+AWYDVASFLTYR+NCHGEL+A
Sbjct: 121 LTHAPSSEPPE-------FIGKATDLSELAFEAFSSRDHAWYDVASFLTYRINCHGELDA 180

Query: 181 RVRYTGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVV 240
           RVRY GFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLC+RE QDHALYFDAYVV
Sbjct: 181 RVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCFRERQDHALYFDAYVV 240

Query: 241 EIQRRLHDIGGCRCIFVVRYDHDHCEEKVHLGRLCCRPSSYNSDQL 283
           EIQRRLHDIGGCRCIFVVRY+HDH EEKVH+GRLCCRPS++NSD++
Sbjct: 241 EIQRRLHDIGGCRCIFVVRYEHDHYEEKVHIGRLCCRPSAFNSDRI 279

[Close]

BLAST of Tan0021847.2 vs. ExPASy TrEMBL
Match: A0A5A7UBT5 (Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold481G00190 PE=4 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 4.1e-132
Identity = 244/290 (84.14%), Postives = 256/290 (88.28%), Query Frame = 0


Query: 1   MEFRNSSMDLDDSPFEFTLAE----IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRA 60
           ME   SS  LDDS FEFTLAE    IVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRA
Sbjct: 1   MEHPKSSKLLDDSSFEFTLAEASSYIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRA 60

Query: 61  GKSPVTAEQVQGWFENRKNELRSSSKKARPPPPPPPRP--PPSP--PPPTPPPKLLLYHS 120
            KSPVTAE V  WFENR+ ELRSSSKKARPPPPPPP P  PPSP  PPPTPPPKLLLYHS
Sbjct: 61  AKSPVTAEHVHAWFENRRKELRSSSKKARPPPPPPPPPELPPSPSSPPPTPPPKLLLYHS 120

Query: 121 DSTFLTDAPSSEPPESFPQFKVHAGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHG 180
           +S FLT APSSEPPE         GKATDLSELAFEAFSSRD+AWYDVASFLTYR+NCHG
Sbjct: 121 ESDFLTHAPSSEPPE-------FIGKATDLSELAFEAFSSRDHAWYDVASFLTYRINCHG 180

Query: 181 ELEARVRYTGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFD 240
           EL+ARVRY GFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLC+RE QDHALYFD
Sbjct: 181 ELDARVRYAGFGKDEDEWVNVARGVRDRSIPLESSECYRVKVGDLVLCFRERQDHALYFD 240

Query: 241 AYVVEIQRRLHDIGGCRCIFVVRYDHDHCEEKVHLGRLCCRPSSYNSDQL 283
           AYVVEIQRRLHDIGGCRCIFVVRY+HDH EEKVH+GRLCCRPS++NSD++
Sbjct: 241 AYVVEIQRRLHDIGGCRCIFVVRYEHDHYEEKVHIGRLCCRPSAFNSDRI 283

[Close]

BLAST of Tan0021847.2 vs. TAIR 10
Match: AT1G15215.2 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 228.8 bits (582), Expect = 5.5e-60
Identity = 124/259 (47.88%), Postives = 173/259 (66.80%), Query Frame = 0


Query: 16  EFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVQGWFENRKN 75
           EFTL+EIV+M+N+ K+ GDQ+L ++F Q VA  FSCS  R GKS +T +QVQ WF+ +  
Sbjct: 13  EFTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEK-- 72

Query: 76  ELRSSSKKARPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTFLTDAPSSEPPESFPQFKVH 135
            L+  S+            P S   P+PP ++    + S++ ++A ++    +    +  
Sbjct: 73  -LKHQSQ------------PKSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTR 132

Query: 136 AGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEARVRYTGFGKDEDEWVNVAR 195
            GKA+DL++LAFEA S+RD AWYDV+SFLTYRV   GELE RVR++GF    DEWVNV  
Sbjct: 133 KGKASDLADLAFEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKT 192

Query: 196 GVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVR 255
            VR+RSIP+E SEC RV VGDL+LC++E +D ALY D +V+ I+R +HD   C C+F+VR
Sbjct: 193 SVRERSIPVEPSECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVR 252

Query: 256 YDHDHCEEKVHLGRLCCRP 275
           Y+ D+ EE + L R+C RP
Sbjct: 253 YELDNTEESLGLERICRRP 256

[Close]

BLAST of Tan0021847.2 vs. TAIR 10
Match: AT1G15215.3 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 216.1 bits (549), Expect = 3.7e-56
Identity = 118/247 (47.77%), Postives = 165/247 (66.80%), Query Frame = 0


Query: 16  EFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVQGWFENRKN 75
           EFTL+EIV+M+N+ K+ GDQ+L ++F Q VA  FSCS  R GKS +T +QVQ WF+ +  
Sbjct: 13  EFTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEK-- 72

Query: 76  ELRSSSKKARPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTFLTDAPSSEPPESFPQFKVH 135
            L+  S+            P S   P+PP ++    + S++ ++A ++    +    +  
Sbjct: 73  -LKHQSQ------------PKSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTR 132

Query: 136 AGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEARVRYTGFGKDEDEWVNVAR 195
            GKA+DL++LAFEA S+RD AWYDV+SFLTYRV   GELE RVR++GF    DEWVNV  
Sbjct: 133 KGKASDLADLAFEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKT 192

Query: 196 GVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVR 255
            VR+RSIP+E SEC RV VGDL+LC++E +D ALY D +V+ I+R +HD   C C+F+VR
Sbjct: 193 SVRERSIPVEPSECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVR 244

Query: 256 YDHDHCE 263
           Y+ D+ E
Sbjct: 253 YELDNTE 244

[Close]

BLAST of Tan0021847.2 vs. TAIR 10
Match: AT1G15215.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 201.8 bits (512), Expect = 7.1e-52
Identity = 111/238 (46.64%), Postives = 156/238 (65.55%), Query Frame = 0


Query: 25  MDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVQGWFENRKNELRSSSKKA 84
           M+N+ K+ GDQ+L ++F Q VA  FSCS  R GKS +T +QVQ WF+ +   L+  S+  
Sbjct: 1   MENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEK---LKHQSQ-- 60

Query: 85  RPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTFLTDAPSSEPPESFPQFKVHAGKATDLSE 144
                     P S   P+PP ++    + S++ ++A ++    +    +   GKA+DL++
Sbjct: 61  ----------PKSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLAD 120

Query: 145 LAFEAFSSRDNAWYDVASFLTYRVNCHGELEARVRYTGFGKDEDEWVNVARGVRDRSIPL 204
           LAFEA S+RD AWYDV+SFLTYRV   GELE RVR++GF    DEWVNV   VR+RSIP+
Sbjct: 121 LAFEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPV 180

Query: 205 ESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDHCE 263
           E SEC RV VGDL+LC++E +D ALY D +V+ I+R +HD   C C+F+VRY+ D+ E
Sbjct: 181 EPSECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTE 223

[Close]

BLAST of Tan0021847.2 vs. TAIR 10
Match: AT3G18380.1 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 186.0 bits (471), Expect = 4.1e-47
Identity = 119/276 (43.12%), Postives = 155/276 (56.16%), Query Frame = 0


Query: 15  FEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVQGWFENRK 74
           F F L E+ EM+ IL        G+   + +A  FS SP R GK  V  +Q+  WF+NR+
Sbjct: 12  FRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRR 71

Query: 75  NELRSSSKKA-------RPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTFLTDAPSSEPPE 134
             LR+   KA         P    P    S   P   PK      +   +T APS     
Sbjct: 72  YALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSG---- 131

Query: 135 SFPQFKVHAGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEARVRYTGFGKDE 194
           S     + +G  +D S L FEA S+RD AWYDV +FL +R    G+ E +VR+ GF  +E
Sbjct: 132 SLVPGVMRSG--SDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEE 191

Query: 195 DEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGG 254
           DEW+NV + VR RS+P E+SEC  V  GDLVLC++EG+D ALYFDA V++ QRR HD+ G
Sbjct: 192 DEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRG 251

Query: 255 CRCIFVVRYDHDHCEEKVHLGRLCCRP-SSYNSDQL 283
           CRC F+VRY HD  EE V L ++C RP + Y   QL
Sbjct: 252 CRCRFLVRYSHDQSEEIVPLRKICRRPETDYRLQQL 281

[Close]

BLAST of Tan0021847.2 vs. TAIR 10
Match: AT3G18380.2 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 181.8 bits (460), Expect = 7.7e-46
Identity = 118/277 (42.60%), Postives = 156/277 (56.32%), Query Frame = 0


Query: 15  FEFTLAEIVEMDNILKDSGDQTLGQEFFQDVALHFSCSPWRAGKSPVTAEQVQGWFENRK 74
           F F L E+ EM+ IL        G+   + +A  FS SP R GK  V  +Q+  WF+NR+
Sbjct: 12  FRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRR 71

Query: 75  NELRSSSKKA-------RPPPPPPPRPPPSPPPPTPPPKLLLYHSDSTFLTDAPSSEPPE 134
             LR+   KA         P    P    S   P   PK      +   +T APS     
Sbjct: 72  YALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSG---- 131

Query: 135 SFPQFKVHAGKATDLSELAFEAFSSRDNAWYDVASFLTYRVNCHGELEARVRYTGFGKDE 194
           S     + +G  +D S L FEA S+RD AWYDV +FL +R    G+ E +VR+ GF  +E
Sbjct: 132 SLVPGVMRSG--SDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEE 191

Query: 195 DEWVNVARGVRDRSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGG 254
           DEW+NV + VR RS+P E+SEC  V  GDLVLC++EG+D ALYFDA V++ QRR HD+ G
Sbjct: 192 DEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRG 251

Query: 255 CRCIFVVRYDHDHCEEK-VHLGRLCCRP-SSYNSDQL 283
           CRC F+VRY HD  E++ V L ++C RP + Y   QL
Sbjct: 252 CRCRFLVRYSHDQSEQEIVPLRKICRRPETDYRLQQL 282

The following BLAST results are available for this feature:

BLAST of Tan0021847.2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI47	7.7e-59	47.88	Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE...	[more]
Q8RWJ7	5.7e-46	43.12	Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE...	[more]

BLAST of Tan0021847.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897963.1	4.5e-141	90.07	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Benincasa hispida]	[more]
XP_023514197.1	5.0e-140	87.59	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6593488.1	1.5e-139	88.11	Protein SAWADEE HOMEODOMAIN-like 1, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022964467.1	1.6e-138	87.41	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucurbita moschata]	[more]
KAG7025835.1	6.1e-138	87.76	Protein SAWADEE HOMEODOMAIN-like 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Tan0021847.2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHW3	7.8e-139	87.41	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1KFQ7	3.9e-138	86.71	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1DBC4	1.6e-136	87.46	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A1S3CIG7	7.5e-134	85.31	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7UBT5	4.1e-132	84.14	Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X2 OS=Cucumis melo var. ...	[more]

BLAST of Tan0021847.2 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15215.2	5.5e-60	47.88	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT1G15215.3	3.7e-56	47.77	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT1G15215.1	7.1e-52	46.64	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT3G18380.1	4.1e-47	43.12	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]
AT3G18380.2	7.7e-46	42.60	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.40		coord: 142..203 e-value: 4.3E-30 score: 105.7
None	No IPR available	GENE3D	2.30.30.140		coord: 204..276 e-value: 2.8E-33 score: 115.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..110
None	No IPR available	PANTHER	PTHR33827:SF12	SUBFAMILY NOT NAMED	coord: 8..282
IPR032001	SAWADEE domain	PFAM	PF16719	SAWADEE	coord: 144..271 e-value: 1.2E-37 score: 129.0
IPR039276	Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2	PANTHER	PTHR33827	PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2	coord: 8..282

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0021847	Tan0021847	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0021847.2-five_prime_utr	Tan0021847.2-five_prime_utr-LG06:2032292..2032356	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0021847.2-exon	Tan0021847.2-exon-LG06:2032292..2032419	exon
Tan0021847.2-exon	Tan0021847.2-exon-LG06:2032581..2032666	exon
Tan0021847.2-exon	Tan0021847.2-exon-LG06:2032753..2032798	exon
Tan0021847.2-exon	Tan0021847.2-exon-LG06:2032877..2033081	exon
Tan0021847.2-exon	Tan0021847.2-exon-LG06:2033878..2033947	exon
Tan0021847.2-exon	Tan0021847.2-exon-LG06:2034893..2034944	exon
Tan0021847.2-exon	Tan0021847.2-exon-LG06:2035132..2035275	exon
Tan0021847.2-exon	Tan0021847.2-exon-LG06:2035490..2035609	exon
Tan0021847.2-exon	Tan0021847.2-exon-LG06:2035726..2036097	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0021847.2-cds	Tan0021847.2-cds-LG06:2032357..2032419	CDS
Tan0021847.2-cds	Tan0021847.2-cds-LG06:2032581..2032666	CDS
Tan0021847.2-cds	Tan0021847.2-cds-LG06:2032753..2032798	CDS
Tan0021847.2-cds	Tan0021847.2-cds-LG06:2032877..2033081	CDS
Tan0021847.2-cds	Tan0021847.2-cds-LG06:2033878..2033947	CDS
Tan0021847.2-cds	Tan0021847.2-cds-LG06:2034893..2034944	CDS
Tan0021847.2-cds	Tan0021847.2-cds-LG06:2035132..2035275	CDS
Tan0021847.2-cds	Tan0021847.2-cds-LG06:2035490..2035609	CDS
Tan0021847.2-cds	Tan0021847.2-cds-LG06:2035726..2035788	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0021847.2-three_prime_utr	Tan0021847.2-three_prime_utr-LG06:2035789..2036097	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0021847.2	Tan0021847.2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding