Tan0021301.1 (mRNA) Snake gourd v1

Overview


Name	Tan0021301.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ethylene-responsive transcription factor ERF113-like
Location	LG06: 19171204 .. 19173038 (-)
Sequence length	1835
RNA-Seq Expression	Tan0021301.1
Synteny	Tan0021301.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAGTTTGCGTAAAGAAGTTTTCTTCTTTGTGTGTGGTGGAAACGATGCAAAAAAGAAATAAATAAAACTGGTGTATATTGGACATTATCTCACACGTTCATCTTATTTTCGTGGGAAACGACAACAATTCGTGTTAATTAGCTGTGTGTTTTGTTTGGCAATTGGCATATATCATATGAACAACGTTGGTGGTCAAGATCATAAACCTAATAAACCCCCCTCCATTTTAATTAATTAAATTTAATTTACTACTCTCTTTCTCTTTATTATTATTATTAGTTAGGCCAATCGAAAACCCCTTTTTCCCAAATTTGTTCAGACGATTCAACCCTATTCTATGATATCAAACCTCTCTTAATTCCGTAACTTCCCATCTAACTACTTGCTATTCTCTTTACGCTTTTGACCATCGACCAAACTTTTTATTTTATTATAATTATTATATATTTATTCATACCCCCCCTCCTCCATTGTCAAATCTTGAAAACGATGGTTTCTTTGGCCACTATCCATGCTTCCTTGTTTTTTACATGCGCTCTTCTCTCTTCTCTTCTCTTCTCTTCAATTCAATTTTATTGTTTTTTTTTTCTCCATTAAAAAAAAATCAACTTTATTTAATCTGGTAAAAGTGTGCAATAAAGTTTGTTGGATTGATGCATGTTACGTTGAGAATTTGGTCACGGGCAGTGGCACCGACTTTTGTTTTTATTTAATATGTGTTTTTTTGTGGTGCATGGAAAGATTTATGAAATGAAGAACATGGGGGAGATGGAGATCTAAGAAAGAGATGTGTCGATGTCATGTGTGTGCATGCTTTTAATTATTATTATAAAATTTAAAAAAAATAAAAGGAGGAGAAATGTCCATGGGATCTGGCCCTAGCTAGAATAATATATATTTGGATATATATATATATATATATAGCGCGGCTAGCTCTTGCACATGCACCCATTCAATTATATTCCAATTGAGAAAATTTTTGCATATTCTATTTTCTGTGTCTTTGTCTGATAAAAAAGTCGGGAGGTTTGTCTTGTAATTGACAGATTTTGTTTTTATTTATATTGATATATGTGTTGTATATGTATGTAATTAATGTCAGAAACTGGGAGGAAGCGACATTATAGAGGCGTAAGACAAAGACCATGGGGAAAATGGGCAGCGGAGATTCGTGACCCGAAGAAAGCAGCTAGAGTTTGGCTCGGCACTTTCGACACTGCCGAGGCTGCTGCCATTGCCTATGACAACGCTGCCTTGAGGTTTAAAGGCACCAAGGCTAAACTTAATTTTCCTGAACGGGTACAAGCCAACCCTGTCGAGTTTGGCTTTCTCTCCGGCGGTGGAGCTGCTGCTAGTGCTACAGCTCCGGCAGTCGTCGCCTCACTATCATCACCTTCTGTTGCCCTTCCGCCGCCCTTGTCTCAGGAAGAAGCCTTCCCTGGACTTCACCAGTACGCCCAACTTCTCTCCAGCACCGACGCCGATTTTCCCTTTTACTCTTCCACTCTTCTCAACCAACCTCATTACCCTTTTTTTTCTTCTTCTTCTTCGTCTTCCAGCCAACACCACCAACAAGATCAAGATCACTACGGGAAAGATTTCGGCGCCGGTGGCTCCACCAATTAAACCAATATTGTTAGTTCACATCACATTTATATGAGTTTTTGTACTCACCAACTACTACTACGTATGAGATTTTATATCCATTGCTTATATAATTAATCTATGCCCTAGTTTCATGATCTTCCTAGCTGATAATAATTTACAAACTATATAATTCTCAAGTGAATTCTTTTTATTCTCCCCTACCTACGTGATATTTTCTTTATTATT

mRNA sequence

CTCAGTTTGCGTAAAGAAGTTTTCTTCTTTGTGTGTGGTGGAAACGATGCAAAAAAGAAATAAATAAAACTGGTGTATATTGGACATTATCTCACACGTTCATCTTATTTTCGTGGGAAACGACAACAATTCGTGTTAATTAGCTGTGTGTTTTGTTTGGCAATTGGCATATATCATATGAACAACGTTGGTGGTCAAGATCATAAACCTAATAAACCCCCCTCCATTTTAATTAATTAAATTTAATTTACTACTCTCTTTCTCTTTATTATTATTATTAGTTAGGCCAATCGAAAACCCCTTTTTCCCAAATTTGTTCAGACGATTCAACCCTATTCTATGATATCAAACCTCTCTTAATTCCGTAACTTCCCATCTAACTACTTGCTATTCTCTTTACGCTTTTGACCATCGACCAAACTTTTTATTTTATTATAATTATTATATATTTATTCATACCCCCCCTCCTCCATTGTCAAATCTTGAAAACGATGGTTTCTTTGGCCACTATCCATGCTTCCTTGTTTTTTACATGCGCTCTTCTCTCTTCTCTTCTCTTCTCTTCAATTCAATTTTATTGTTTTTTTTTTCTCCATTAAAAAAAAATCAACTTTATTTAATCTGGTAAAAGTGTGCAATAAAGTTTGTTGGATTGATGCATGTTACGTTGAGAATTTGGTCACGGGCAGTGGCACCGACTTTTGTTTTTATTTAATATGTGTTTTTTTGTGGTGCATGGAAAGATTTATGAAATGAAGAACATGGGGGAGATGGAGATCTAAGAAAGAGATGTGTCGATGTCATGTGTGTGCATGCTTTTAATTATTATTATAAAATTTAAAAAAAATAAAAGGAGGAGAAATGTCCATGGGATCTGGCCCTAGCTAGAATAATATATATTTGGATATATATATATATATATATAGCGCGGCTAGCTCTTGCACATGCACCCATTCAATTATATTCCAATTGAGAAAATTTTTGCATATTCTATTTTCTGTGTCTTTGTCTGATAAAAAAGTCGGGAGGTTTGTCTTGTAATTGACAGATTTTGTTTTTATTTATATTGATATATGTGTTGTATATGTATGTAATTAATGTCAGAAACTGGGAGGAAGCGACATTATAGAGGCGTAAGACAAAGACCATGGGGAAAATGGGCAGCGGAGATTCGTGACCCGAAGAAAGCAGCTAGAGTTTGGCTCGGCACTTTCGACACTGCCGAGGCTGCTGCCATTGCCTATGACAACGCTGCCTTGAGGTTTAAAGGCACCAAGGCTAAACTTAATTTTCCTGAACGGGTACAAGCCAACCCTGTCGAGTTTGGCTTTCTCTCCGGCGGTGGAGCTGCTGCTAGTGCTACAGCTCCGGCAGTCGTCGCCTCACTATCATCACCTTCTGTTGCCCTTCCGCCGCCCTTGTCTCAGGAAGAAGCCTTCCCTGGACTTCACCAGTACGCCCAACTTCTCTCCAGCACCGACGCCGATTTTCCCTTTTACTCTTCCACTCTTCTCAACCAACCTCATTACCCTTTTTTTTCTTCTTCTTCTTCGTCTTCCAGCCAACACCACCAACAAGATCAAGATCACTACGGGAAAGATTTCGGCGCCGGTGGCTCCACCAATTAAACCAATATTGTTAGTTCACATCACATTTATATGAGTTTTTGTACTCACCAACTACTACTACGTATGAGATTTTATATCCATTGCTTATATAATTAATCTATGCCCTAGTTTCATGATCTTCCTAGCTGATAATAATTTACAAACTATATAATTCTCAAGTGAATTCTTTTTATTCTCCCCTACCTACGTGATATTTTCTTTATTATT

Coding sequence (CDS)

ATGTCAGAAACTGGGAGGAAGCGACATTATAGAGGCGTAAGACAAAGACCATGGGGAAAATGGGCAGCGGAGATTCGTGACCCGAAGAAAGCAGCTAGAGTTTGGCTCGGCACTTTCGACACTGCCGAGGCTGCTGCCATTGCCTATGACAACGCTGCCTTGAGGTTTAAAGGCACCAAGGCTAAACTTAATTTTCCTGAACGGGTACAAGCCAACCCTGTCGAGTTTGGCTTTCTCTCCGGCGGTGGAGCTGCTGCTAGTGCTACAGCTCCGGCAGTCGTCGCCTCACTATCATCACCTTCTGTTGCCCTTCCGCCGCCCTTGTCTCAGGAAGAAGCCTTCCCTGGACTTCACCAGTACGCCCAACTTCTCTCCAGCACCGACGCCGATTTTCCCTTTTACTCTTCCACTCTTCTCAACCAACCTCATTACCCTTTTTTTTCTTCTTCTTCTTCGTCTTCCAGCCAACACCACCAACAAGATCAAGATCACTACGGGAAAGATTTCGGCGCCGGTGGCTCCACCAATTAA

Protein sequence

MSETGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNFPERVQANPVEFGFLSGGGAAASATAPAVVASLSSPSVALPPPLSQEEAFPGLHQYAQLLSSTDADFPFYSSTLLNQPHYPFFSSSSSSSSQHHQQDQDHYGKDFGAGGSTN

Homology

[Close]

BLAST of Tan0021301.1 vs. ExPASy Swiss-Prot
Match: Q9LYU3 (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 GN=ERF113 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.2e-35
Identity = 92/163 (56.44%), Postives = 107/163 (65.64%), Query Frame = 0


Query: 6   RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           R+RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE AA+AYD AAL+FKGTKAKLNF
Sbjct: 35  RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNF 94

Query: 66  PERVQANPVEFGFLSGGGAAASATAPAVVASLSSPSVALPPPLSQEEAFP-----GLHQY 125
           PERVQ                S     V  S++SP     PP +   ++P      + QY
Sbjct: 95  PERVQGPTTT--------TTISHAPRGVSESMNSPPPRPGPPSTTTTSWPMTYNQDILQY 154

Query: 126 AQLL-SSTDADFPFYSSTLLNQPHYPFFSSSSSSSSQHHQQDQ 163
           AQLL S+ + D  +Y+STL +QP      SSSSSSSQ  QQ Q
Sbjct: 155 AQLLTSNNEVDLSYYTSTLFSQPFST--PSSSSSSSQQTQQQQ 187

[Close]

BLAST of Tan0021301.1 vs. ExPASy Swiss-Prot
Match: Q9FH54 (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 GN=ERF114 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-26
Identity = 78/169 (46.15%), Postives = 96/169 (56.80%), Query Frame = 0


Query: 6   RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           R+RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE+AA+AYD AAL+FKG+KAKLNF
Sbjct: 86  RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNF 145

Query: 66  PERVQANPVEFGFLSGGGAAASATAPAVVASLSSPSVALPPPLSQEEAFPGLHQYAQLLS 125
           PERVQ                       + S S+   +   P  + ++ P  +QY    S
Sbjct: 146 PERVQ-----------------------LGSNSTYYSSNQIPQMEPQSIPNYNQYYHDAS 205

Query: 126 STD----------ADFPFYSSTLLNQPHYPFFSSSSSSSSQHHQQDQDH 165
           S D               YS +  N       +SSSS  S   Q++QD+
Sbjct: 206 SGDMLSFNLGGGYGSGTGYSMSHDNSTTTAATTSSSSGGSSRQQEEQDY 231

[Close]

BLAST of Tan0021301.1 vs. ExPASy Swiss-Prot
Match: Q9LY29 (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 GN=ERF115 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.4e-26
Identity = 83/181 (45.86%), Postives = 101/181 (55.80%), Query Frame = 0


Query: 6   RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           RKRHYRGVRQRPWGKWAAEIRDP+KAARVWLGTF+TAEAAA+AYDNAAL+FKG+KAKLNF
Sbjct: 88  RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNF 147

Query: 66  PERVQANPVEFGFLSGGGAAASATAPAVVASLSSPSVALPPPLSQEEAFPGLHQ--YAQL 125
           PER Q               ++ T P    S S+  +    P +  +  P  +Q  Y Q 
Sbjct: 148 PERAQL----------ASNTSTTTGPPNYYS-SNNQIYYSNPQTNPQTIPYFNQYYYNQY 207

Query: 126 L--SSTDADFPFYS-------STLLNQPHYPFFSSSSSSSSQHHQQDQDHYGKDFGAGGS 176
           L       D   YS        ++ N       +SSSS  S   Q D+  Y +    G S
Sbjct: 208 LHQGGNSNDALSYSLAGGETGGSMYNHQTLSTTNSSSSGGSSRQQDDEQDYARYLRFGDS 257

[Close]

BLAST of Tan0021301.1 vs. ExPASy Swiss-Prot
Match: Q70II3 (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 9.1e-26
Identity = 56/68 (82.35%), Postives = 60/68 (88.24%), Query Frame = 0


Query: 6   RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           +KR YRGVRQRPWGKWAAEIRDP +AARVWLGTFDTAEAAA AYD AALRF+G KAKLNF
Sbjct: 73  KKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNF 132

Query: 66  PERVQANP 74
           PE V+  P
Sbjct: 133 PEDVRILP 140

[Close]

BLAST of Tan0021301.1 vs. ExPASy Swiss-Prot
Match: P93007 (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 GN=ERF112 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 9.1e-26
Identity = 73/154 (47.40%), Postives = 92/154 (59.74%), Query Frame = 0


Query: 6   RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           R+R+YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AA+AYD AA  F+G KAKLNF
Sbjct: 66  RQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNF 125

Query: 66  PERVQANPVEFGFLSGGGAAASATAPAVVASLSSPSVALPPPLSQEEAFPGLHQYAQLLS 125
           PE ++ NP +         + + +   ++ +  SP    PPP++ +     L QY    S
Sbjct: 126 PEHIRVNPTQL------YPSPATSHDRIIVTPPSP----PPPIAPDIL---LDQYGHFQS 185

Query: 126 STDADFPFYSSTLLNQPHYPFFSSSSSSSSQHHQ 160
            +       S  +L          SSSSSS +HQ
Sbjct: 186 RSSDSSANLSMNML----------SSSSSSLNHQ 196

[Close]

BLAST of Tan0021301.1 vs. NCBI nr
Match: XP_038875113.1 (ethylene-responsive transcription factor ERF113-like [Benincasa hispida])

HSP 1 Score: 277.3 bits (708), Expect = 9.0e-71
Identity = 148/178 (83.15%), Postives = 155/178 (87.08%), Query Frame = 0


Query: 2   SETGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKA 61
           SE+GRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKG KA
Sbjct: 138 SESGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGNKA 197

Query: 62  KLNFPERVQANPVEFGFLSGGGAAASATAPAVVASLSSPSVALPPPLSQEEAFPGLHQYA 121
           KLNFPERVQANP EFGFL    A A   + A V S SSPSV+LPPPLSQEEAFPGLHQYA
Sbjct: 198 KLNFPERVQANPAEFGFLPATTAGAPPPS-AAVPSYSSPSVSLPPPLSQEEAFPGLHQYA 257

Query: 122 QLLSSTDADFPFYSSTLL---NQPHYPFFSSSSSSSSQHHQQDQDHYGKDFGAGGSTN 177
           QLLSS+DADFP+YSSTLL    QPHYPF  SSSSSS++ HQQD DHYGKDFG GGSTN
Sbjct: 258 QLLSSSDADFPYYSSTLLLNQQQPHYPF--SSSSSSTREHQQDYDHYGKDFGTGGSTN 312

[Close]

BLAST of Tan0021301.1 vs. NCBI nr
Match: KAG6576097.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273.9 bits (699), Expect = 9.9e-70
Identity = 154/183 (84.15%), Postives = 156/183 (85.25%), Query Frame = 0


Query: 1   MSETGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK 60
           M+ET RK HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK
Sbjct: 8   MAETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK 67

Query: 61  AKLNFPERVQANPVEFGFL-SGGGAAASATAPAVVASL-----SSPSVALPPPLSQEEAF 120
           AKLNFPERVQANP EFGFL S GGAAA   APA VASL     SS SVAL PPL QEEAF
Sbjct: 68  AKLNFPERVQANPAEFGFLPSTGGAAA---APATVASLSSSSSSSSSVALVPPLPQEEAF 127

Query: 121 PGLHQYAQLLSSTDADFPFYSSTLLN-QPHYPFFSSSSSSSSQHHQQDQDHYGKDFGAGG 177
           PGLHQYAQLLSSTDADFP+YSSTLLN QPHYPF    SSS S  HQQD DHYGKDFG GG
Sbjct: 128 PGLHQYAQLLSSTDADFPYYSSTLLNQQPHYPF----SSSPSHPHQQDHDHYGKDFGPGG 183

[Close]

BLAST of Tan0021301.1 vs. NCBI nr
Match: KAG7014616.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270.4 bits (690), Expect = 1.1e-68
Identity = 153/183 (83.61%), Postives = 155/183 (84.70%), Query Frame = 0


Query: 1   MSETGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK 60
           M+ET RK HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK
Sbjct: 1   MAETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK 60

Query: 61  AKLNFPERVQANPVEFGFL-SGGGAAASATAPAVVASL-----SSPSVALPPPLSQEEAF 120
           AKLNFPERVQANP EFGFL S GGAAA   APA VASL     SS SVAL P L QEEAF
Sbjct: 61  AKLNFPERVQANPAEFGFLPSTGGAAA---APATVASLSSSSSSSSSVALVPRLPQEEAF 120

Query: 121 PGLHQYAQLLSSTDADFPFYSSTLLN-QPHYPFFSSSSSSSSQHHQQDQDHYGKDFGAGG 177
           PGLHQYAQLLSSTDADFP+YSSTLLN QPHYPF    SSS S  HQQD DHYGKDFG GG
Sbjct: 121 PGLHQYAQLLSSTDADFPYYSSTLLNQQPHYPF----SSSPSHPHQQDHDHYGKDFGPGG 176

[Close]

BLAST of Tan0021301.1 vs. NCBI nr
Match: XP_023548873.1 (ethylene-responsive transcription factor ERF113-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 269.6 bits (688), Expect = 1.9e-68
Identity = 146/179 (81.56%), Postives = 154/179 (86.03%), Query Frame = 0


Query: 1   MSETGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK 60
           M+ET RK HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK
Sbjct: 8   MAETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTK 67

Query: 61  AKLNFPERVQANPVEFGFL--SGGGAAASATAPAVVASLSSPSVALPPPLSQEEAFPGLH 120
           AKLNFPERVQANP EFGFL  +GG AAA AT  ++ +S SS S++L PPL QEEAFPGLH
Sbjct: 68  AKLNFPERVQANPAEFGFLPSTGGAAAAPATVASLSSSSSSSSISLLPPLPQEEAFPGLH 127

Query: 121 QYAQLLSSTDADFPFYSSTLLN-QPHYPFFSSSSSSSSQHHQQDQDHYGKDFGAGGSTN 177
           QYAQLLSSTDADFP+YSSTLLN QPHYPF    SSS S    QD DHYGKDFGAGGSTN
Sbjct: 128 QYAQLLSSTDADFPYYSSTLLNQQPHYPF----SSSPSHPLPQDHDHYGKDFGAGGSTN 182

[Close]

BLAST of Tan0021301.1 vs. NCBI nr
Match: XP_022991755.1 (ethylene-responsive transcription factor ERF113-like, partial [Cucurbita maxima])

HSP 1 Score: 268.1 bits (684), Expect = 5.4e-68
Identity = 152/177 (85.88%), Postives = 153/177 (86.44%), Query Frame = 0


Query: 3   ETGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK 62
           ET RK HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK
Sbjct: 79  ETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK 138

Query: 63  LNFPERVQANPVEFGFL-SGGGAAASATAPAVVASL-SSPSVALPPPLSQEEAFPGLHQY 122
           LNFPERVQANP EFGFL S GGAAA   APA VASL SS SVAL PPL QEEAFPGL QY
Sbjct: 139 LNFPERVQANPAEFGFLPSTGGAAA---APATVASLSSSSSVALLPPLPQEEAFPGLQQY 198

Query: 123 AQLLSSTDADFPFYSSTLLN-QPHYPFFSSSSSSSSQHHQQDQDHYGKDFGAGGSTN 177
           AQLLSSTDADFP+YSSTLLN QPHYPF    SSS S   QQD DHYGKDFGAGGSTN
Sbjct: 199 AQLLSSTDADFPYYSSTLLNQQPHYPF----SSSPSHPRQQDHDHYGKDFGAGGSTN 248

[Close]

BLAST of Tan0021301.1 vs. ExPASy TrEMBL
Match: A0A6J1JTV1 (ethylene-responsive transcription factor ERF113-like OS=Cucurbita maxima OX=3661 GN=LOC111488287 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.6e-68
Identity = 152/177 (85.88%), Postives = 153/177 (86.44%), Query Frame = 0


Query: 3   ETGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK 62
           ET RK HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK
Sbjct: 79  ETERKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK 138

Query: 63  LNFPERVQANPVEFGFL-SGGGAAASATAPAVVASL-SSPSVALPPPLSQEEAFPGLHQY 122
           LNFPERVQANP EFGFL S GGAAA   APA VASL SS SVAL PPL QEEAFPGL QY
Sbjct: 139 LNFPERVQANPAEFGFLPSTGGAAA---APATVASLSSSSSVALLPPLPQEEAFPGLQQY 198

Query: 123 AQLLSSTDADFPFYSSTLLN-QPHYPFFSSSSSSSSQHHQQDQDHYGKDFGAGGSTN 177
           AQLLSSTDADFP+YSSTLLN QPHYPF    SSS S   QQD DHYGKDFGAGGSTN
Sbjct: 199 AQLLSSTDADFPYYSSTLLNQQPHYPF----SSSPSHPRQQDHDHYGKDFGAGGSTN 248

[Close]

BLAST of Tan0021301.1 vs. ExPASy TrEMBL
Match: A0A0A0K9G5 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091830 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.7e-68
Identity = 142/175 (81.14%), Postives = 152/175 (86.86%), Query Frame = 0


Query: 3   ETGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK 62
           ++GRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK
Sbjct: 20  QSGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK 79

Query: 63  LNFPERVQANPVEFGFLSGGGAAASATAPAVVASLSSPSVALPPPLSQEEAFPGLHQYAQ 122
           LNFPERVQANP EFGFLS     AS  AP    ++SSPSV+LPPPLS EEAFPGLHQYAQ
Sbjct: 80  LNFPERVQANPAEFGFLS----PASIAAPPPPTAVSSPSVSLPPPLSHEEAFPGLHQYAQ 139

Query: 123 LLSSTDADFPFYSSTLL---NQPHYPFFSSSSSSSSQHHQQDQDHYGKDFGAGGS 175
           LLSS+DADFP+YSS+LL    Q HYPFF SSSSSSSQ  Q+DQD YG+DFG GGS
Sbjct: 140 LLSSSDADFPYYSSSLLFNQQQSHYPFF-SSSSSSSQQQQEDQDRYGEDFGTGGS 189

[Close]

BLAST of Tan0021301.1 vs. ExPASy TrEMBL
Match: A0A6J1GR63 (ethylene-responsive transcription factor ERF113-like OS=Cucurbita moschata OX=3662 GN=LOC111456288 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.0e-67
Identity = 151/179 (84.36%), Postives = 152/179 (84.92%), Query Frame = 0


Query: 6   RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           RK HYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF
Sbjct: 62  RKIHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 121

Query: 66  PERVQANPVEFGFL-SGGGAAASATAPAVVASL------SSPSVALPPPLSQEEAFPGLH 125
           PERVQANP EFGFL S GGAAA   APA VASL      SS SVAL PPL Q EAFPGLH
Sbjct: 122 PERVQANPAEFGFLPSTGGAAA---APATVASLSSSSSSSSSSVALLPPLPQGEAFPGLH 181

Query: 126 QYAQLLSSTDADFPFYSSTLLN-QPHYPFFSSSSSSSSQHHQQDQDHYGKDFGAGGSTN 177
           QYAQLLSSTDADFP+YSSTLLN QPHYPF    SSS S  HQQD DHYGKDFGAGGSTN
Sbjct: 182 QYAQLLSSTDADFPYYSSTLLNQQPHYPF----SSSPSHPHQQDHDHYGKDFGAGGSTN 233

[Close]

BLAST of Tan0021301.1 vs. ExPASy TrEMBL
Match: A0A6J1KRN4 (ethylene-responsive transcription factor ERF113-like OS=Cucurbita maxima OX=3661 GN=LOC111498070 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.8e-67
Identity = 144/184 (78.26%), Postives = 153/184 (83.15%), Query Frame = 0


Query: 3   ETGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAK 62
           E+G KRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKG KAK
Sbjct: 50  ESGSKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGNKAK 109

Query: 63  LNFPERVQANPVEFGFLSGGGAAASA-TAPAVVASLSSPSVALPPPLSQEEAFPGLHQYA 122
           LNFPER+Q NP  F FL  GGAA+SA  AP  +ASLSSPS    PPLS +EAFPGLHQYA
Sbjct: 110 LNFPERLQPNPPHFAFLPAGGAASSAPVAPPALASLSSPSPPPLPPLSHQEAFPGLHQYA 169

Query: 123 QLLSSTDADFPFYSSTLLNQP-HYPFFSSSSSSSSQHHQ--------QDQDHYGKDFGAG 177
           QLLSSTDADFP+YSSTLLNQP HYPF+   SSSSSQHHQ        Q+Q+ YGKDFG G
Sbjct: 170 QLLSSTDADFPYYSSTLLNQPNHYPFY---SSSSSQHHQQEQEQEQEQEQEQYGKDFGPG 229

[Close]

BLAST of Tan0021301.1 vs. ExPASy TrEMBL
Match: A0A5D3DLW8 (Ethylene-responsive transcription factor ERF113-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001920 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.5e-66
Identity = 140/173 (80.92%), Postives = 148/173 (85.55%), Query Frame = 0


Query: 5   GRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLN 64
           GRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLN
Sbjct: 8   GRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLN 67

Query: 65  FPERVQANPVEFGFLSGGGAAASATAPAVVASLSSPSVALPPPLSQEEAFPGLHQYAQLL 124
           FPERVQANP EFGFLS      S  AP    ++SSPSV+LPPPLS EE FPGLHQYAQLL
Sbjct: 68  FPERVQANPAEFGFLS----PPSIAAPPPPTAVSSPSVSLPPPLSHEEVFPGLHQYAQLL 127

Query: 125 SSTDADFPFYSSTLL---NQPHYPFFSSSSSSSSQHHQQDQDHYGKDFGAGGS 175
           SS+DADFP+YSS+LL    Q HYPFF SSSSSSSQ  Q+DQD YG+DFG GGS
Sbjct: 128 SSSDADFPYYSSSLLFNQQQSHYPFF-SSSSSSSQQQQEDQDRYGEDFGTGGS 175

[Close]

BLAST of Tan0021301.1 vs. TAIR 10
Match: AT5G13330.1 (related to AP2 6l )

HSP 1 Score: 148.3 bits (373), Expect = 5.9e-36
Identity = 92/163 (56.44%), Postives = 107/163 (65.64%), Query Frame = 0


Query: 6   RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           R+RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE AA+AYD AAL+FKGTKAKLNF
Sbjct: 35  RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNF 94

Query: 66  PERVQANPVEFGFLSGGGAAASATAPAVVASLSSPSVALPPPLSQEEAFP-----GLHQY 125
           PERVQ                S     V  S++SP     PP +   ++P      + QY
Sbjct: 95  PERVQGPTTT--------TTISHAPRGVSESMNSPPPRPGPPSTTTTSWPMTYNQDILQY 154

Query: 126 AQLL-SSTDADFPFYSSTLLNQPHYPFFSSSSSSSSQHHQQDQ 163
           AQLL S+ + D  +Y+STL +QP      SSSSSSSQ  QQ Q
Sbjct: 155 AQLLTSNNEVDLSYYTSTLFSQPFST--PSSSSSSSQQTQQQQ 187

[Close]

BLAST of Tan0021301.1 vs. TAIR 10
Match: AT5G61890.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 7.7e-28
Identity = 78/169 (46.15%), Postives = 96/169 (56.80%), Query Frame = 0


Query: 6   RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           R+RHYRGVRQRPWGKWAAEIRDPKKAARVWLGTF+TAE+AA+AYD AAL+FKG+KAKLNF
Sbjct: 86  RRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNF 145

Query: 66  PERVQANPVEFGFLSGGGAAASATAPAVVASLSSPSVALPPPLSQEEAFPGLHQYAQLLS 125
           PERVQ                       + S S+   +   P  + ++ P  +QY    S
Sbjct: 146 PERVQ-----------------------LGSNSTYYSSNQIPQMEPQSIPNYNQYYHDAS 205

Query: 126 STD----------ADFPFYSSTLLNQPHYPFFSSSSSSSSQHHQQDQDH 165
           S D               YS +  N       +SSSS  S   Q++QD+
Sbjct: 206 SGDMLSFNLGGGYGSGTGYSMSHDNSTTTAATTSSSSGGSSRQQEEQDY 231

[Close]

BLAST of Tan0021301.1 vs. TAIR 10
Match: AT5G07310.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-27
Identity = 83/181 (45.86%), Postives = 101/181 (55.80%), Query Frame = 0


Query: 6   RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           RKRHYRGVRQRPWGKWAAEIRDP+KAARVWLGTF+TAEAAA+AYDNAAL+FKG+KAKLNF
Sbjct: 88  RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNF 147

Query: 66  PERVQANPVEFGFLSGGGAAASATAPAVVASLSSPSVALPPPLSQEEAFPGLHQ--YAQL 125
           PER Q               ++ T P    S S+  +    P +  +  P  +Q  Y Q 
Sbjct: 148 PERAQL----------ASNTSTTTGPPNYYS-SNNQIYYSNPQTNPQTIPYFNQYYYNQY 207

Query: 126 L--SSTDADFPFYS-------STLLNQPHYPFFSSSSSSSSQHHQQDQDHYGKDFGAGGS 176
           L       D   YS        ++ N       +SSSS  S   Q D+  Y +    G S
Sbjct: 208 LHQGGNSNDALSYSLAGGETGGSMYNHQTLSTTNSSSSGGSSRQQDDEQDYARYLRFGDS 257

[Close]

BLAST of Tan0021301.1 vs. TAIR 10
Match: AT2G33710.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 6.5e-27
Identity = 73/154 (47.40%), Postives = 92/154 (59.74%), Query Frame = 0


Query: 6   RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           R+R+YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AA+AYD AA  F+G KAKLNF
Sbjct: 66  RQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNF 125

Query: 66  PERVQANPVEFGFLSGGGAAASATAPAVVASLSSPSVALPPPLSQEEAFPGLHQYAQLLS 125
           PE ++ NP +         + + +   ++ +  SP    PPP++ +     L QY    S
Sbjct: 126 PEHIRVNPTQL------YPSPATSHDRIIVTPPSP----PPPIAPDIL---LDQYGHFQS 185

Query: 126 STDADFPFYSSTLLNQPHYPFFSSSSSSSSQHHQ 160
            +       S  +L          SSSSSS +HQ
Sbjct: 186 RSSDSSANLSMNML----------SSSSSSLNHQ 196

[Close]

BLAST of Tan0021301.1 vs. TAIR 10
Match: AT2G33710.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 6.5e-27
Identity = 73/154 (47.40%), Postives = 92/154 (59.74%), Query Frame = 0


Query: 6   RKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAIAYDNAALRFKGTKAKLNF 65
           R+R+YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AA+AYD AA  F+G KAKLNF
Sbjct: 66  RQRNYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNF 125

Query: 66  PERVQANPVEFGFLSGGGAAASATAPAVVASLSSPSVALPPPLSQEEAFPGLHQYAQLLS 125
           PE ++ NP +         + + +   ++ +  SP    PPP++ +     L QY    S
Sbjct: 126 PEHIRVNPTQL------YPSPATSHDRIIVTPPSP----PPPIAPDIL---LDQYGHFQS 185

Query: 126 STDADFPFYSSTLLNQPHYPFFSSSSSSSSQHHQ 160
            +       S  +L          SSSSSS +HQ
Sbjct: 186 RSSDSSANLSMNML----------SSSSSSLNHQ 196

The following BLAST results are available for this feature:

BLAST of Tan0021301.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYU3	8.2e-35	56.44	Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH54	1.1e-26	46.15	Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LY29	2.4e-26	45.86	Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q70II3	9.1e-26	82.35	Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ...	[more]
P93007	9.1e-26	47.40	Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Tan0021301.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875113.1	9.0e-71	83.15	ethylene-responsive transcription factor ERF113-like [Benincasa hispida]	[more]
KAG6576097.1	9.9e-70	84.15	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
KAG7014616.1	1.1e-68	83.61	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023548873.1	1.9e-68	81.56	ethylene-responsive transcription factor ERF113-like [Cucurbita pepo subsp. pepo...	[more]
XP_022991755.1	5.4e-68	85.88	ethylene-responsive transcription factor ERF113-like, partial [Cucurbita maxima]	[more]

BLAST of Tan0021301.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JTV1	2.6e-68	85.88	ethylene-responsive transcription factor ERF113-like OS=Cucurbita maxima OX=3661...	[more]
A0A0A0K9G5	7.7e-68	81.14	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091830 PE=...	[more]
A0A6J1GR63	1.0e-67	84.36	ethylene-responsive transcription factor ERF113-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KRN4	3.8e-67	78.26	ethylene-responsive transcription factor ERF113-like OS=Cucurbita maxima OX=3661...	[more]
A0A5D3DLW8	2.5e-66	80.92	Ethylene-responsive transcription factor ERF113-like protein OS=Cucumis melo var...	[more]

BLAST of Tan0021301.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13330.1	5.9e-36	56.44	related to AP2 6l	[more]
AT5G61890.1	7.7e-28	46.15	Integrase-type DNA-binding superfamily protein	[more]
AT5G07310.1	1.7e-27	45.86	Integrase-type DNA-binding superfamily protein	[more]
AT2G33710.1	6.5e-27	47.40	Integrase-type DNA-binding superfamily protein	[more]
AT2G33710.2	6.5e-27	47.40	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 32..48 score: 70.37 coord: 10..21 score: 76.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 9..72 e-value: 3.5E-38 score: 142.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 9..58 e-value: 5.0E-14 score: 52.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 9..66 score: 24.882088
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 9..67 e-value: 3.38174E-24 score: 87.7123
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 8..68 e-value: 4.3E-28 score: 99.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..176
None	No IPR available	PANTHER	PTHR31190:SF243	AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR-LIKE PROTEIN ISOFORM 2	coord: 3..155
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 3..155
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 9..67

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0021301	Tan0021301	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0021301.1-three_prime_utr	Tan0021301.1-three_prime_utr-LG06:19171204..19171410	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0021301.1-exon	Tan0021301.1-exon-LG06:19171204..19173038	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0021301.1-cds	Tan0021301.1-cds-LG06:19171411..19171941	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0021301.1-five_prime_utr	Tan0021301.1-five_prime_utr-LG06:19171942..19173038	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0021301.1	Tan0021301.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0000724	double-strand break repair via homologous recombination
cellular_component	GO:0005634	nucleus
cellular_component	GO:0097196	Shu complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003697	single-stranded DNA binding