Tan0020259.1 (mRNA) Snake gourd v1

Overview


Name	Tan0020259.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Girdin-like
Location	LG03: 4391847 .. 4398226 (+)
Sequence length	990
RNA-Seq Expression	Tan0020259.1
Synteny	Tan0020259.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGAAAGGAATCTAGACCTCGAGCAAGAGAATGAGAAGTTACGTCGAGAAGTTAGTCACTTAACTAACCTAACAGCTCGAACTAATAAAAAGCTTGACGAAGTAGAAAAAACCTCAAAAGATCGATCCAAGCGGGAAAGAGATTATGATGAGGAAAATAAGAGGTTGAACAAGGAAAATCACACATCGAGGAACCAAAACACAAAGACTACGAAGGAAGGTTCACCTCTGAGAAGACAAGATCGAGACTTTGTAGAAGCTAAGGAGACCCTCATGAAGCTGGTTAGCGAGTTGAAAGAACTCGTTAATAAGCGAGAAGTACAATTCGTTGAGTTTGAGCAAGCTAATAATACCCTGCGCCATACTTTGGACGATTTACATATGAAACTGAACGATCAATCAGAGGAGTATGAAATTATGAGGAACTGTGCAAGTTCACTGGACCGCCAACTGAAGGCTTGTCAAATATCAAGCGAGCAGTTATTAATTCAAAAGGAGCAATTGGAACAACAGTGTCATACAATGAGAGAAGACAATGATGTCTTGAGAAGTGACCTACAAAGGATCATCGAAAAAGTGAACCAAACAATGCGTACAATCGCGATAATGGCTAGAAGAGCTCGAGGATTTGCAGAATGGGCAAGGGATTTGCGAAGGAGTACTTCCCCAATGACATCAAATGCGGATGAACTATATGAGTTTCTAGGGATGATCAGTAGAGACCTTCGATACTTTGGTCACTTTCATTAAATGTTCCCTTTCCCAATTTCGTATTTTCTATTTTATTCTTTCCTAGTTAATTTGTAATTTTCTTTCAATCGTCAATAAAATAAAGTTCATTAGTTCATGCATCATGGGTTTTTTTTTTATCATTCTGAATTTTAAATCATACTTCAGAGTTGTCAAAATAGCTCGATCACCACGAATCTGCCATACCCATGCCACTAGATACAGAAGAAGAATTATGGAAGAACAAAGCTTAGAAATGGAAAAAACGAGGAAAGATATCGAGGAATTACGAGGGAAGCTAGATGCCATTCTTATCCTTTTGGAAAAGGGCAAGACAACAATCTGAAGGGAATCGAGTCCCGCAGCTGAAGCGATTGTGAATTGCGCGTTCTCAATTTAGTTACAATGATTTCATTCAAGAACGAAACAAACTAGATTAAGCATATAAACATAATATAGACATCAAGAAATGTTACCTTTGAAGAACTCTTTCTTCAAGTTTTCCTCCTCTCCCACGATCAAGATCTCAGCAACACAAACTCGAACGATCACCGACACTACCACCGATTCTTCTCCGTTGTTCTCTAGGTGAGGGAGGAAGGTGGGTTCCCTTTAGGAGAGCTGAGGTGTTGTGAGAGAGAGGTTTGTGTTTTGGAACTCTTCCAACAATAGAACAAAAGCTTAGGTTAACTGACCTAGTTGCATCTCATGCAACTATATATATAAGGAGATAGGGATGGAAATTACCATCCTATCCCTCTTTTATTCTCTCTTTAGTATATACTTAATATGTGAATCCAATTCACATTAAAACTATATATTATATCAATTATATCACATATAATTGATATGACATCTCATATATGAAATTGAACACTTCAATTTCATTCCTAACTTTATACCCTCAATATTACCATGTTGAGCAAACGGAGGGACCTAATGGACCTACAGTTCATGAGCTCCAATGATATGAGATTAACTGATCAAACTCTTTGATTCAGTTAATCAATATTCATTAACTACAAATCACTGCACTATAGACTTGTAGCTGCACTCTCCTCACTGTAGATTATATTGTGTCCATTTATATAATCATTACCCATGAGTCGACCATTCACAGGTTGTTCGTAATCACGACTGGGTCAAATTACCGTTTTACCCATATGATTACCTCTTTGCTCCTTAAGCACCATTGATACTTTAATGAACAACAAGTCTACGGTCCTACCATAGACTCATACCCTCATAGAGGGCGGGGCCCCGTTGTTCAAGACTTGGAGTCAGTTCTTAAGGGAATAACCTATCTAATTCCTTAGTGTAGAAATAAGTGAATTCCATCTTACATAGTTAAGTCCCCAGCTACCTACGAGATTCTGTCCCTGAGAAGGTAGGCTTAGTGAGTCGGCTACAGGCCACTCTCACCCATACCAGTCTAAGGACAAACCCCTATAAGAAGGAGTTCTTAACTTGCTCAGGATTCAAGTCGAGTCACTAATGATCATCTATAAATTACTAGTCTTATCCTGTTAACGGTGTTACACTGGTTAGACTAATAATTTGCGGTCTGGTCTTGTATGAACTCTTCATACAGGATGCCCTACTCGCATGTCAACTACATGAATGAGTTGGATTACCGCATTTGTACTAATTACTGAAGGGATTTTGAATTCCCGCAGCGGAAGACGTTGTGAAACGTCGTTGATCCGTTGTGTAATTCCTATCTTAAAATTGAATCTATCTCATAGATCCTAGGCTAAACATGCAAAGAAGAAGAAGTAAACAGTAAGTAATAGATATTAACCTCTTGAAGAACTCTTCTTCAACATTTTCTCCTTCTCCGGTCACGATCTCTCTCGATCCGACGTTCTCCTCGAACACGAACCTCGATCCGAACAGGGAGACACCTCCAAAGGGTCTTCTCGGTTGTTCTCGGGAGGTTGAGGGAGAGTAGGTGGGACTCCCTTTGGTTTTGGGTGAGGAGAGAATTAGAGAGAATTGAGAGAGTTCTAGAGAGAAAACATTTGCTCTCTTTGGATGGAAATCCAAAAAATGGCAAATGGCATACCAAAGGCTTCTTGCAAAGCCTTTAAATACTATTGTGTGATGGAGTTAAAACCTCCACCAAATCACAATTTTACCACAACCATATAATATACAAATCACATTTGTATATTATATAATATAAGATATCTCATACCTTATTATACAAATCTCATTTGCATAAATGTGGAATTATAAATTGAATCACATTCAATTTAATTTCTCTCAATTCAATTTCTCCAATTAGCACTAATTAATCAATTAGGCTATACTATAGTTTATTATGAATCTCATTCACATCAAACTATATATTATGTCATCTATATCTCATATAAATGACATAAATACCCAAATAATGAATTTGAACACTTCAAATTTACACCAAATCAGAAACCCTCAATTTGTCCAATTTGAGCCAACCGAGGGACCTAATGGACCTACACGTGACGAGCTCCAATGATCCGGAGACTAACCTGTCAAACTCTTTGACCCGGTTATTCAACATTCATTAGCTACGGTAACACTCCACTAAAGCCCGTAGCTACACTCTCATCACTGTAGGACAAGTTGTGTCCATTGATGTAACCAATACCCATGAGTCGACCCTTCACAAGTTGTTCGTAGTCACAGTTGGGTCAAATTACCGTTTTACCCCTATGTCTACATCTTGCTCCTTAAGTCTCACTGCTCCTCTAATGAACAACTACGTTGCATGGTCCAACCATAAACAACAACCCTCTCAGGCCAATGAGAGAGTGGGGCCCCGTTGTTCAAGCCCTGGAGACAAACACTTAAGGGAACAACCCTCTAGTTTCCCTAAGTCTGAACGAGTGAATTCCTTCTTGCGTAGTCAAGTTCCCGGCTCCCACGTGGTCCCCGCCGCCCGAAGATAGGCATATTGGGCGAGCAACGGTGGCCACCCTCACCCGTACTAGTCAAAGGGACGGACCCCGCATGAGCGAGTCCGAACACGCTCGTGGATTAAGGTCGAGTCACTAATGGTCATCTACGAATTTATTAGCTCTATATCATTAACGGTGTTACATCGCAAGTCTAATAATTCACGATGCAGTCTTATACAATCTCATTGCATAGGATGCCCCCACTCGCATGTCAACCACATGAACATGAACGAGTCGATCACCTCGTTTGTATCTAATACAAAGCGGCCGCATCCACAAGTGTATCCGAGGATTAGGTCTCCAACCCTATCCATATATCGTAGACCGTTCGGGTCATTAACTCGAACGTGATCCTCCCTGTGTGTCCACTACACACCGTTCAAGTTCTTAGTTCTCTCATAAATACAATGACCCTAGAGCTTAGTTTATTGGATTAAGTTTATGAAAAATGCGAGACACAAAGTTGAAATAAATAACTCTTATTCATTTACAACTTGGAATATTACAAACTACACGAGATGAGGACATACATCCCAACAATTACAAAGTGGGTCGCATCCATGGTGTTACCAGAATTAGGTTTCCAACCTTATTCTTATACCATAGACCATTTAGGTTATATTCTTGATCACAATCCAAATAGTGTCCACAACACTAATAATCAAGATATATATATTATGAAGATATATGTTATAACCTTGGAGCTTAGTTTATTGGATTTATAAAGCAAGACTGTAATTTTATCAAAACAAATAACTCTTTATTTAATTGATCAAAATTACACAAGTTTAGGGCATACATCCCAACACAATCGATGTTGCTCAACCTAGCAAAGTAGTTAACGATCCTCTCAGGGTTAATTTTACCCCGGAATATACGACGTACAAGCCTTTGTACGTCATCCTGGTAGAGCAAATTTTGTTCCCTTTTAAGACATAACATGCTCCTACAAGTGGCCAAACTGGAACTTCAATCTATAAGGAAGGACCATCGAGGGTAACTGTTACTGGTCCCAATCTTGACAATCCAGAAGTCAAGAAGGGATTGACTGGGGGTGAGAATGTCTCATCTGACGAGAAGCTTGAGGTATTAGAAGAAAGGTTGAGAGTAATCGAAGGTACTGATGTATTTGGGAACATAGATGCTACTAATCTGTGTTTAGTGCCAGACGTGGTACTCCCACCAAAATTCAAGGTACCAGAATTTGAGAAATATGACGGAACGTCCTGCCCCAAAAATTATCTTATTATGTATTGCAGAAAAATGGCAGCGTATGTTCAAAATGATAGGTTATTAATTCATTTGCTTTAAAGATAGTTTGACTGGCCCAACATCTCGTTGGTATATGCAATTGGATAGTGCACATGTCCGTTCGTGGAAAAACTTAGTTGATTCATTTTTAAAGCAGTACAAACACAATCTAGACCTTGCTCCTGATCGACTAGATTTACAACAGATGGAAAAAAAGAGTGATGAAAATTTTAAAGAATACGCTCAAAGATGGAGGGATACTACTGCTCAAGTACAACCTCCTTTGGCGGATAAAGAGTTGTCAACCATGTTCATCAATACCCTAAAGTCTCCATTTTATGATCATATGATAGGGAGTGCTTCAACGAATTTCTCAGACATCATGACGATTGGGGAAAGAATTGAGTTTGGAATCATGCACGGTAGGATGAGTCAAGCCATAGAATCTTTAACAACCAAAAAATGATCCACTTTGAAGAAAAAGGAGGGAGATGTATAGATGATAGGAAAGGTGGGGAAATTTCCTCAATAATCCCATCAACAGATGTCGTAGTACCCCCCAGGTTATTATCCACCCTCTATGGATATTATCCATATCAAGTAAATAGTGCATCTGCTCAATATGTTCCTTACTCAAGCCAAGGTCCAAGACCAATAATGAATCAAGGTTTCCAGCCTCATAAGCAGCAACAGGTGGTCACCTCTGGACAACAGAGCAACAAAGTAACACAGAAGCCTTAGTTTGAACCTATTCCAATGACATATACAGAACTTTTACCTCAGCTGTTCCAGAATCTGCAATTGACACTTAAGCCCTTACGACCTTTGCAACCCCCCCTATCCAAGATGGTATGATCCGAACGCTCATTGTTACTATCATGCAGGAGCTGCTGGGCATACGACAGAAAATTGTACCGCCTTGAAGTATAAGGTTCAAGAGCTCATCAACACAGGATGGTTAAATTTTAAAAAAGAAGAGGGGTCCAACGTCAATAAGAATCCCTTGCCTAATCACCAAGTAAATGCGATAGAACATCAGAGTGTTGATGCAAAAGCACAGGTTTCAACAGTTGTGACCCCGATGGAAAAACTTTTCAAAATTCTGCTTGCTAATGGTTATGTATCTATAGAATACTTATGCCCAGATTCTACTCAAGAAGAATATAATGATAACTTGACTTGTCCATTTCACGCTGGGCAAAAGGTCATTCTTTGGATCGACGTCACCACTTTCGCAAGAGGGTCCAAGAATTGATGGACATGAAGGTTCTTACTGTTGCACAATCTCGTGGCTTTGATCCAGATAATGAAGTGGGCACTATAGAAGGACTTTCCTCTAAAAAGGTTGGTTTAAATGTGTCTTTTAAGCCTCTCACAATCTTTTATCGTGAAAAGCCCACCCTACCTGCTACTGATCTGAAGCTAATCACCATCCATATGTCAGCTCCTTTTTAA

mRNA sequence

ATGTTAGAAAGGAATCTAGACCTCGAGCAAGAGAATGAGAAGTTACGTCGAGAAGTTAGTCACTTAACTAACCTAACAGCTCGAACTAATAAAAAGCTTGACGAAGTAGAAAAAACCTCAAAAGATCGATCCAAGCGGGAAAGAGATTATGATGAGGAAAATAAGAGGTTGAACAAGGAAAATCACACATCGAGGAACCAAAACACAAAGACTACGAAGGAAGGTTCACCTCTGAGAAGACAAGATCGAGACTTTGTAGAAGCTAAGGAGACCCTCATGAAGCTGGTTAGCGAGTTGAAAGAACTCGTTAATAAGCGAGAAGTACAATTCGTTGAGTTTGAGCAAGCTAATAATACCCTGCGCCATACTTTGGACGATTTACATATGAAACTGAACGATCAATCAGAGGAGTATGAAATTATGAGGAACTGTGCAAGTTCACTGGACCGCCAACTGAAGGCTTGTCAAATATCAAGCGAGCAGTTATTAATTCAAAAGGAGCAATTGGAACAACAGTGTCATACAATGAGAGAAGACAATGATGTCTTGAGAAGTGACCTACAAAGGATCATCGAAAAAGTGAACCAAACAATGCGTACAATCGCGATAATGGCTAGAAGAGCTCGAGGATTTGCAGAATGGGCAAGGGATTTGCGAAGGAGTACTTCCCCAATGACATCAAATGCGGATGAACTATATGAGTTTCTAGGGATGATCAGTAGAGACCTTCGATACTTTGGTCATTCTTTGGATCGACGTCACCACTTTCGCAAGAGGGTCCAAGAATTGATGGACATGAAGGTTCTTACTGTTGCACAATCTCGTGGCTTTGATCCAGATAATGAAGTGGGCACTATAGAAGGACTTTCCTCTAAAAAGGTTGGTTTAAATGTGTCTTTTAAGCCTCTCACAATCTTTTATCGTGAAAAGCCCACCCTACCTGCTACTGATCTGAAGCTAATCACCATCCATATGTCAGCTCCTTTTTAA

Coding sequence (CDS)

ATGTTAGAAAGGAATCTAGACCTCGAGCAAGAGAATGAGAAGTTACGTCGAGAAGTTAGTCACTTAACTAACCTAACAGCTCGAACTAATAAAAAGCTTGACGAAGTAGAAAAAACCTCAAAAGATCGATCCAAGCGGGAAAGAGATTATGATGAGGAAAATAAGAGGTTGAACAAGGAAAATCACACATCGAGGAACCAAAACACAAAGACTACGAAGGAAGGTTCACCTCTGAGAAGACAAGATCGAGACTTTGTAGAAGCTAAGGAGACCCTCATGAAGCTGGTTAGCGAGTTGAAAGAACTCGTTAATAAGCGAGAAGTACAATTCGTTGAGTTTGAGCAAGCTAATAATACCCTGCGCCATACTTTGGACGATTTACATATGAAACTGAACGATCAATCAGAGGAGTATGAAATTATGAGGAACTGTGCAAGTTCACTGGACCGCCAACTGAAGGCTTGTCAAATATCAAGCGAGCAGTTATTAATTCAAAAGGAGCAATTGGAACAACAGTGTCATACAATGAGAGAAGACAATGATGTCTTGAGAAGTGACCTACAAAGGATCATCGAAAAAGTGAACCAAACAATGCGTACAATCGCGATAATGGCTAGAAGAGCTCGAGGATTTGCAGAATGGGCAAGGGATTTGCGAAGGAGTACTTCCCCAATGACATCAAATGCGGATGAACTATATGAGTTTCTAGGGATGATCAGTAGAGACCTTCGATACTTTGGTCATTCTTTGGATCGACGTCACCACTTTCGCAAGAGGGTCCAAGAATTGATGGACATGAAGGTTCTTACTGTTGCACAATCTCGTGGCTTTGATCCAGATAATGAAGTGGGCACTATAGAAGGACTTTCCTCTAAAAAGGTTGGTTTAAATGTGTCTTTTAAGCCTCTCACAATCTTTTATCGTGAAAAGCCCACCCTACCTGCTACTGATCTGAAGCTAATCACCATCCATATGTCAGCTCCTTTTTAA

Protein sequence

MLERNLDLEQENEKLRREVSHLTNLTARTNKKLDEVEKTSKDRSKRERDYDEENKRLNKENHTSRNQNTKTTKEGSPLRRQDRDFVEAKETLMKLVSELKELVNKREVQFVEFEQANNTLRHTLDDLHMKLNDQSEEYEIMRNCASSLDRQLKACQISSEQLLIQKEQLEQQCHTMREDNDVLRSDLQRIIEKVNQTMRTIAIMARRARGFAEWARDLRRSTSPMTSNADELYEFLGMISRDLRYFGHSLDRRHHFRKRVQELMDMKVLTVAQSRGFDPDNEVGTIEGLSSKKVGLNVSFKPLTIFYREKPTLPATDLKLITIHMSAPF

Homology

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BLAST of Tan0020259.1 vs. NCBI nr
Match: TYK18656.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 145.6 bits (366), Expect = 7.6e-31
Identity = 98/249 (39.36%), Postives = 146/249 (58.63%), Query Frame = 0


Query: 3   ERNLDLEQENEKLRREVS----HLTNLTARTNKKLDEVEKTSKDRSKRERDYDEENKRLN 62
           E+N  LEQENEKLR+E S    HL N   +T   L   +K  KD        D+E +R+N
Sbjct: 126 EKNRLLEQENEKLRKETSQWMDHLQNELEKTKSFLKNQDKLEKDLETS----DKEMRRMN 185

Query: 63  KENHTSRNQNTKTTKEGSPLRRQDRDFVEAKETLMKLVSELKELVNKREVQFVEFEQANN 122
           K N + +N+ T             +D    KE  ++LV++L   + KRE Q ++ E  N+
Sbjct: 186 KANRSLKNEKTTLQATVGSEDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQNH 245

Query: 123 TLRHTLDDLHMKLNDQSEEYEIMRNCASSLDRQLKACQISSEQLLIQKEQLEQQCHTMRE 182
           +LR T+D+LH+K+ ++SEEYEI++N   SL  QL A Q SS+++  + E L      M+ 
Sbjct: 246 SLRQTVDNLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDYVQMKV 305

Query: 183 DNDVLRSDLQRIIEKVNQTMRTIAIMARRARGFAEWARDLRRSTSPMTSNADELYEFLGM 242
           D D+   D Q ++E+V+QT+  + +M++RA GFAEWA DLR     M  +AD+L +FL M
Sbjct: 306 DYDLQTRDFQVLVERVDQTIEFLRMMSKRANGFAEWAADLRVKFFSMHPHADDLNKFLKM 365

Query: 243 ISRDLRYFG 248
           I R+L +FG
Sbjct: 366 ICRELGHFG 370

[Close]

BLAST of Tan0020259.1 vs. NCBI nr
Match: XP_031738551.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 2.2e-30
Identity = 95/248 (38.31%), Postives = 152/248 (61.29%), Query Frame = 0


Query: 3   ERNLDLEQENEKLRREVSHLTNLTARTNKKLDEVEKTSKDRSKRERD---YDEENKRLNK 62
           E+N  LEQENEKL++E S   +      ++L++ +   K++ K E++    DEE +R+NK
Sbjct: 133 EKNRLLEQENEKLQKETSQWIDHATFLQRELEKTKSFLKNQDKLEKNLEVLDEEMRRMNK 192

Query: 63  ENHTSRNQNTKTTKEGSPLRRQDRDFVEAKETLMKLVSELKELVNKREVQFVEFEQANNT 122
            N + +N+ T             +D    KE  ++LV++LK  + KRE Q V+ E  N +
Sbjct: 193 SNRSLKNEKTILQATVESQDEYIKDLENMKEYYLELVNDLKSSIGKREAQIVDLEVHNCS 252

Query: 123 LRHTLDDLHMKLNDQSEEYEIMRNCASSLDRQLKACQISSEQLLIQKEQLEQQCHTMRED 182
           LR T+D LH+K+ + SE+Y+I++N A SL  QL A Q SSE+++ + + L+     M+ D
Sbjct: 253 LRQTVDSLHVKMVEHSEDYKILKNYADSLHHQLTAFQNSSERIVQEYKLLKTDYMQMKVD 312

Query: 183 NDVLRSDLQRIIEKVNQTMRTIAIMARRARGFAEWARDLRRSTSPMTSNADELYEFLGMI 242
            D+ R D Q ++E+V+QT+  + I++RRA GFAEWA DLR +   +  ++D+L  FL MI
Sbjct: 313 YDLQRRDFQTLVERVDQTIGFLRIVSRRANGFAEWAADLRINFFSIRPHSDDLNRFLKMI 372

Query: 243 SRDLRYFG 248
            R+L +FG
Sbjct: 373 CRELGHFG 380

[Close]

BLAST of Tan0020259.1 vs. NCBI nr
Match: KAA0036949.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-29
Identity = 95/249 (38.15%), Postives = 147/249 (59.04%), Query Frame = 0


Query: 3   ERNLDLEQENEKLRREVSHLTNLTARTNKKLDEVEKTSKDRSKRERD---YDEENKRLNK 62
           E+N  LEQENEKLR+E S   +       KL++ +   K++ K E+D    D+E +R+NK
Sbjct: 367 EKNRLLEQENEKLRKETSQWMDHATYLQNKLEKTKSFLKNQDKLEKDLETLDKEMRRMNK 426

Query: 63  ENHTSRNQNTKTTKEGSPLRRQDRDFVEAKETLMKLVSELKELVNKREVQFVEFEQANNT 122
            N + +N+ T             +D    KE  +KLV++L   + KRE + ++ E  N++
Sbjct: 427 ANRSLKNEKTTFQATMGSQDEYIKDLENGKEYFLKLVNDLNTSIRKRETKIMDLEAQNHS 486

Query: 123 LRHTLDDLHMKLNDQSEEYEIMRNCASSLDRQLKACQISSEQLLIQKEQLEQQCHTMRED 182
           LR T+D LH+K+ + SEEYEI++N A SL  QL A Q SS+++  + E L      M+ D
Sbjct: 487 LRQTVDSLHLKMVEHSEEYEILKNYADSLHYQLTALQNSSKRITQEYESLNTDYVQMKVD 546

Query: 183 NDVLRSDLQRIIEKVNQTMRTIAIMARRARGFAEWARDLRRSTSPMTSNADELYEFLGMI 242
            D+   D Q ++E+V+QT+  + ++++RA  FAE A DLR +   M  +AD+L  FL MI
Sbjct: 547 YDMQTRDFQVLVERVDQTIEFLRMVSKRANDFAESAADLRVNFFSMQPHADDLNRFLKMI 606

Query: 243 SRDLRYFGH 249
            R+L +FGH
Sbjct: 607 CRELGHFGH 615

[Close]

BLAST of Tan0020259.1 vs. NCBI nr
Match: TYK23632.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 140.6 bits (353), Expect = 2.4e-29
Identity = 92/248 (37.10%), Postives = 146/248 (58.87%), Query Frame = 0


Query: 3   ERNLDLEQENEKLRREVSHLTNLTARTNKKLDEVEKTSKDRSKRERD---YDEENKRLNK 62
           E+N  LEQENEKLR+E S   +       +L++ +   K++ K E+D    D+E +R+NK
Sbjct: 75  EKNRLLEQENEKLRKETSQWIDHATYLQNELEKTKSFLKNQDKLEKDIETLDKEMRRMNK 134

Query: 63  ENHTSRNQNTKTTKEGSPLRRQDRDFVEAKETLMKLVSELKELVNKREVQFVEFEQANNT 122
            N   +N+ T             +D    KE  ++LV++L   + KRE Q ++ E  N++
Sbjct: 135 ANRRLKNEKTTLQATVGSQDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQNHS 194

Query: 123 LRHTLDDLHMKLNDQSEEYEIMRNCASSLDRQLKACQISSEQLLIQKEQLEQQCHTMRED 182
           L  T+D LH+K+ ++SEEYEI++N   SL  QL A Q SS+++  + E L      M+ D
Sbjct: 195 LHQTVDSLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDYVQMKVD 254

Query: 183 NDVLRSDLQRIIEKVNQTMRTIAIMARRARGFAEWARDLRRSTSPMTSNADELYEFLGMI 242
            D+   D Q ++E+V+QT+  + ++++RA GFAEWA DLR +   +  +AD+L  FL MI
Sbjct: 255 YDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEWAADLRVNFFSIQPHADDLNRFLKMI 314

Query: 243 SRDLRYFG 248
            R+L +FG
Sbjct: 315 CRELGHFG 322

[Close]

BLAST of Tan0020259.1 vs. NCBI nr
Match: KAA0062685.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-28
Identity = 90/247 (36.44%), Postives = 143/247 (57.89%), Query Frame = 0


Query: 5   NLDLEQENEKLRREVSHLTNLTARTNKKLDEVEKTSKDRSKRERD---YDEENKRLNKEN 64
           ++  EQENEKLR+E S   +       +L + +   K++ K E+D    D+E +R+NK N
Sbjct: 100 DISREQENEKLRKETSQWMDHATYLQNELKKTKSFLKNQDKLEKDLETLDKEMRRMNKAN 159

Query: 65  HTSRNQNTKTTKEGSPLRRQDRDFVEAKETLMKLVSELKELVNKREVQFVEFEQANNTLR 124
            + +N+ T             +D    KE  ++ V++L   + KRE Q ++ E  N++LR
Sbjct: 160 RSLKNEKTTLQATVGSQNEYIKDLENGKEYFLERVNDLNTSIGKRETQIMDLEAQNHSLR 219

Query: 125 HTLDDLHMKLNDQSEEYEIMRNCASSLDRQLKACQISSEQLLIQKEQLEQQCHTMREDND 184
            T+D LH+K+ + SEEYEI++N   SL  QL A Q SS ++  + E L      M+ D D
Sbjct: 220 QTVDSLHLKMAECSEEYEILKNYVESLHYQLTALQNSSRRITQEYESLNTDYVQMKVDYD 279

Query: 185 VLRSDLQRIIEKVNQTMRTIAIMARRARGFAEWARDLRRSTSPMTSNADELYEFLGMISR 244
           +   D Q ++E+V+QT+  + ++++RA GFAEWA DLR +   +  +AD+L  FL MI R
Sbjct: 280 LQTRDFQVLVERVDQTIEFLRMVSKRANGFAEWAADLRVNFFSIQPHADDLNRFLKMICR 339

Query: 245 DLRYFGH 249
           +L +FGH
Sbjct: 340 ELGHFGH 346

[Close]

BLAST of Tan0020259.1 vs. ExPASy TrEMBL
Match: A0A5D3D533 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00200 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.7e-31
Identity = 98/249 (39.36%), Postives = 146/249 (58.63%), Query Frame = 0


Query: 3   ERNLDLEQENEKLRREVS----HLTNLTARTNKKLDEVEKTSKDRSKRERDYDEENKRLN 62
           E+N  LEQENEKLR+E S    HL N   +T   L   +K  KD        D+E +R+N
Sbjct: 126 EKNRLLEQENEKLRKETSQWMDHLQNELEKTKSFLKNQDKLEKDLETS----DKEMRRMN 185

Query: 63  KENHTSRNQNTKTTKEGSPLRRQDRDFVEAKETLMKLVSELKELVNKREVQFVEFEQANN 122
           K N + +N+ T             +D    KE  ++LV++L   + KRE Q ++ E  N+
Sbjct: 186 KANRSLKNEKTTLQATVGSEDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQNH 245

Query: 123 TLRHTLDDLHMKLNDQSEEYEIMRNCASSLDRQLKACQISSEQLLIQKEQLEQQCHTMRE 182
           +LR T+D+LH+K+ ++SEEYEI++N   SL  QL A Q SS+++  + E L      M+ 
Sbjct: 246 SLRQTVDNLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDYVQMKV 305

Query: 183 DNDVLRSDLQRIIEKVNQTMRTIAIMARRARGFAEWARDLRRSTSPMTSNADELYEFLGM 242
           D D+   D Q ++E+V+QT+  + +M++RA GFAEWA DLR     M  +AD+L +FL M
Sbjct: 306 DYDLQTRDFQVLVERVDQTIEFLRMMSKRANGFAEWAADLRVKFFSMHPHADDLNKFLKM 365

Query: 243 ISRDLRYFG 248
           I R+L +FG
Sbjct: 366 ICRELGHFG 370

[Close]

BLAST of Tan0020259.1 vs. ExPASy TrEMBL
Match: A0A5A7T6E2 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00290 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.3e-30
Identity = 95/249 (38.15%), Postives = 147/249 (59.04%), Query Frame = 0


Query: 3   ERNLDLEQENEKLRREVSHLTNLTARTNKKLDEVEKTSKDRSKRERD---YDEENKRLNK 62
           E+N  LEQENEKLR+E S   +       KL++ +   K++ K E+D    D+E +R+NK
Sbjct: 367 EKNRLLEQENEKLRKETSQWMDHATYLQNKLEKTKSFLKNQDKLEKDLETLDKEMRRMNK 426

Query: 63  ENHTSRNQNTKTTKEGSPLRRQDRDFVEAKETLMKLVSELKELVNKREVQFVEFEQANNT 122
            N + +N+ T             +D    KE  +KLV++L   + KRE + ++ E  N++
Sbjct: 427 ANRSLKNEKTTFQATMGSQDEYIKDLENGKEYFLKLVNDLNTSIRKRETKIMDLEAQNHS 486

Query: 123 LRHTLDDLHMKLNDQSEEYEIMRNCASSLDRQLKACQISSEQLLIQKEQLEQQCHTMRED 182
           LR T+D LH+K+ + SEEYEI++N A SL  QL A Q SS+++  + E L      M+ D
Sbjct: 487 LRQTVDSLHLKMVEHSEEYEILKNYADSLHYQLTALQNSSKRITQEYESLNTDYVQMKVD 546

Query: 183 NDVLRSDLQRIIEKVNQTMRTIAIMARRARGFAEWARDLRRSTSPMTSNADELYEFLGMI 242
            D+   D Q ++E+V+QT+  + ++++RA  FAE A DLR +   M  +AD+L  FL MI
Sbjct: 547 YDMQTRDFQVLVERVDQTIEFLRMVSKRANDFAESAADLRVNFFSMQPHADDLNRFLKMI 606

Query: 243 SRDLRYFGH 249
            R+L +FGH
Sbjct: 607 CRELGHFGH 615

[Close]

BLAST of Tan0020259.1 vs. ExPASy TrEMBL
Match: A0A5D3DJ95 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4336G00010 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-29
Identity = 92/248 (37.10%), Postives = 146/248 (58.87%), Query Frame = 0


Query: 3   ERNLDLEQENEKLRREVSHLTNLTARTNKKLDEVEKTSKDRSKRERD---YDEENKRLNK 62
           E+N  LEQENEKLR+E S   +       +L++ +   K++ K E+D    D+E +R+NK
Sbjct: 75  EKNRLLEQENEKLRKETSQWIDHATYLQNELEKTKSFLKNQDKLEKDIETLDKEMRRMNK 134

Query: 63  ENHTSRNQNTKTTKEGSPLRRQDRDFVEAKETLMKLVSELKELVNKREVQFVEFEQANNT 122
            N   +N+ T             +D    KE  ++LV++L   + KRE Q ++ E  N++
Sbjct: 135 ANRRLKNEKTTLQATVGSQDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQNHS 194

Query: 123 LRHTLDDLHMKLNDQSEEYEIMRNCASSLDRQLKACQISSEQLLIQKEQLEQQCHTMRED 182
           L  T+D LH+K+ ++SEEYEI++N   SL  QL A Q SS+++  + E L      M+ D
Sbjct: 195 LHQTVDSLHLKMAERSEEYEILKNYVDSLHYQLTALQNSSKRITQEYESLNTDYVQMKVD 254

Query: 183 NDVLRSDLQRIIEKVNQTMRTIAIMARRARGFAEWARDLRRSTSPMTSNADELYEFLGMI 242
            D+   D Q ++E+V+QT+  + ++++RA GFAEWA DLR +   +  +AD+L  FL MI
Sbjct: 255 YDLQTRDFQVLVERVDQTIEFLRMVSKRANGFAEWAADLRVNFFSIQPHADDLNRFLKMI 314

Query: 243 SRDLRYFG 248
            R+L +FG
Sbjct: 315 CRELGHFG 322

[Close]

BLAST of Tan0020259.1 vs. ExPASy TrEMBL
Match: A0A5A7V9X6 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00140 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 5.9e-29
Identity = 90/247 (36.44%), Postives = 143/247 (57.89%), Query Frame = 0


Query: 5   NLDLEQENEKLRREVSHLTNLTARTNKKLDEVEKTSKDRSKRERD---YDEENKRLNKEN 64
           ++  EQENEKLR+E S   +       +L + +   K++ K E+D    D+E +R+NK N
Sbjct: 100 DISREQENEKLRKETSQWMDHATYLQNELKKTKSFLKNQDKLEKDLETLDKEMRRMNKAN 159

Query: 65  HTSRNQNTKTTKEGSPLRRQDRDFVEAKETLMKLVSELKELVNKREVQFVEFEQANNTLR 124
            + +N+ T             +D    KE  ++ V++L   + KRE Q ++ E  N++LR
Sbjct: 160 RSLKNEKTTLQATVGSQNEYIKDLENGKEYFLERVNDLNTSIGKRETQIMDLEAQNHSLR 219

Query: 125 HTLDDLHMKLNDQSEEYEIMRNCASSLDRQLKACQISSEQLLIQKEQLEQQCHTMREDND 184
            T+D LH+K+ + SEEYEI++N   SL  QL A Q SS ++  + E L      M+ D D
Sbjct: 220 QTVDSLHLKMAECSEEYEILKNYVESLHYQLTALQNSSRRITQEYESLNTDYVQMKVDYD 279

Query: 185 VLRSDLQRIIEKVNQTMRTIAIMARRARGFAEWARDLRRSTSPMTSNADELYEFLGMISR 244
           +   D Q ++E+V+QT+  + ++++RA GFAEWA DLR +   +  +AD+L  FL MI R
Sbjct: 280 LQTRDFQVLVERVDQTIEFLRMVSKRANGFAEWAADLRVNFFSIQPHADDLNRFLKMICR 339

Query: 245 DLRYFGH 249
           +L +FGH
Sbjct: 340 ELGHFGH 346

[Close]

BLAST of Tan0020259.1 vs. ExPASy TrEMBL
Match: A0A5D3DK34 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00110 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.2e-27
Identity = 88/248 (35.48%), Postives = 149/248 (60.08%), Query Frame = 0


Query: 3   ERNLDLEQENEKLRREVSHLTNLTARTNKKLDEVEKTSKDRSKRERD---YDEENKRLNK 62
           E+N  LEQENEKLR+E S   +  A    +L++ + + K++ K E++    D+E +R+NK
Sbjct: 206 EKNRLLEQENEKLRKETSQWMDHAAYLQNELEKNKSSLKNQDKLEKNLETLDKEMRRMNK 265

Query: 63  ENHTSRNQNTKTTKEGSPLRRQDRDFVEAKETLMKLVSELKELVNKREVQFVEFEQANNT 122
            N + +N+ T             +D    KE  ++ V++L   +  RE Q ++ E  N++
Sbjct: 266 ANRSLKNEKTTLKATVGSEDEYIKDLESGKEYFLEFVNDLHTSIGIRETQIMDLEAHNHS 325

Query: 123 LRHTLDDLHMKLNDQSEEYEIMRNCASSLDRQLKACQISSEQLLIQKEQLEQQCHTMRED 182
           LR  +D LH+K+ ++SEEYEI++N   SL  QL A Q SS+++  + E L+     M+ D
Sbjct: 326 LRQIVDSLHLKMVERSEEYEILKNYPDSLHYQLIAFQNSSKRITQEYESLKTDYVQMKVD 385

Query: 183 NDVLRSDLQRIIEKVNQTMRTIAIMARRARGFAEWARDLRRSTSPMTSNADELYEFLGMI 242
            D+   D Q ++E+++QT++ + ++++RA  FAEWA DLR +   + S+AD+L  FL MI
Sbjct: 386 YDLQTRDFQVLVERIDQTIKFLRMVSKRANVFAEWAADLRVNFFSLQSHADDLNRFLKMI 445

Query: 243 SRDLRYFG 248
            ++L +FG
Sbjct: 446 CKELGHFG 453

The following BLAST results are available for this feature:

BLAST of Tan0020259.1 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0020259.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK18656.1	7.6e-31	39.36	girdin-like [Cucumis melo var. makuwa]	[more]
XP_031738551.1	2.2e-30	38.31	LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]	[more]
KAA0036949.1	1.1e-29	38.15	girdin-like [Cucumis melo var. makuwa]	[more]
TYK23632.1	2.4e-29	37.10	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0062685.1	1.2e-28	36.44	girdin-like [Cucumis melo var. makuwa]	[more]

BLAST of Tan0020259.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D533	3.7e-31	39.36	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold390G00200 PE...	[more]
A0A5A7T6E2	5.3e-30	38.15	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00290 PE=...	[more]
A0A5D3DJ95	1.2e-29	37.10	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4336G00010 P...	[more]
A0A5A7V9X6	5.9e-29	36.44	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1576G00140 P...	[more]
A0A5D3DK34	7.2e-27	35.48	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00110 PE...	[more]

BLAST of Tan0020259.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 47..67
None	No IPR available	COILS	Coil	Coil	coord: 5..25
None	No IPR available	COILS	Coil	Coil	coord: 152..186
None	No IPR available	COILS	Coil	Coil	coord: 85..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..67

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0020259	Tan0020259	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0020259.1-exon	Tan0020259.1-exon-LG03:4391847..4392585	exon
Tan0020259.1-exon	Tan0020259.1-exon-LG03:4397976..4398226	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0020259.1-cds	Tan0020259.1-cds-LG03:4391847..4392585	CDS
Tan0020259.1-cds	Tan0020259.1-cds-LG03:4397976..4398226	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0020259.1	Tan0020259.1-protein	polypeptide