Tan0018984.1 (mRNA) Snake gourd v1

Overview


Name	Tan0018984.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Reticulon-like protein
Location	LG04: 6948521 .. 6951842 (-)
Sequence length	606
RNA-Seq Expression	Tan0018984.1
Synteny	Tan0018984.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAACTCCGGTGACCGTCGGAGGTTTCTGCATTCCATTTTTGGTGATGGCAAAGGTTCGTACTCATACCTCCACAAATCTCTTTCCCTTAATTTTGGTTTAAATTTGTTCTTCTACTTTTATCTTTCGTCTATTTCGAAAAGTTATTTTTAAAAAGGGATCGTTTTGATCCATGTATGTAAAATCTTAACACAAATTCTATATACAAGAAATGATTTTGATTACGAAGTTATGATAATACTTTAATAAATAATGATAATATTTATATTAGAAACTATTTCTTGGTAACATTTTAAGAAATTTATTAAATGTAACGTAATTTGTAAATTATGATATAAAAGAAGATAAACTAATAAAAAGGATTACTTTTCAAAAGTACATGAGTTAAAATGAATATTTTAAAGGTAAAGCTCAAATTAGACAAAAAAAAAAAAAAAACTTTTAAATTTGTGTGTAGGAGGTTCTTTAATTTTAAAATTTGTTTAATGAATCAATAAATTTTTGTTCTGGTGTACGATAGATACCTAAATTTTAAATAATGTCTAATGGATTTTTTAAATTTAAATTTTGAGTCTAAAAGTCTTCTCAATTTTATATCTATCTAATAGATTCATTAATTTAAATATGTCTATATATGAATCTTTTAGATTCAAAATTTAAAGTTAAACTCAGTAGAGATTGTGAAGGTTATTAGACAAAAAAGAAGAAAGTCTATAAATTTATTAAATACGGGTTAAAATTCATAGATGTATTATAACAAGACATTAAGGGCTTGTTTGGGACACAAATTATAATGTTATTATGACCTATGGAATAATGTGTATCCTAAACACAGACTATTATAACATTTGACTATACTATTATGCATTTTAAATAATATTATATGATTTTACAAATTATAATAACTCACAAACTATTATAACTCTCTGTTATTATAATTGTGCTCCAAACAATCCCTAAAATTTTGTAGACCGAACCGGTAATTTAATTGTGAGTGTTTGGATTTGAATTGCAGTGGCGGAGATAATGTTGTGGAAGAACAAGAGAGAATCGGCGGCGATTTTGGCCGGAATCAGCGGCGTTTGGTTGCTGTTTGAGGTTTTAGATTACCATTTTGTTACTCTTCTTTCTCATCTACTCATCATTGTTATGCTCCTTCTCTTCTCTTGGAACAAATTGGCTCTTTTCACCCACTGGTATAATTATATTTTTTTGCAATTATTCCTCTCTCTTCATTTTCATTTTCATTTTGTACCGATAAACAAAATTCAATTTTTATTCCTAAACTTATCGAGTTGTATTAATTTTCATCATAAATTTTCAATTTCATCCAATCGTACCTCGAATTTAGATAAGTATTGCAATCTTAATCTAAAACTTTGCAAAATATTACAATTGAAACCCTTTAATAAGTTTTCATTCAAAAAATCGTTGAAAAAATATTCTCATAATTCAGTGCGTTATAAAACATATATATAGTATAAGATTTTGAAGAAAAATGATATTAGAGCTAAATTTTTGTTGATGATAAATTTGTTCCCTAAACAAACTAAATTTTGTACAGAGTTTGATTTTATATAAATGAATGAGTTTGTGTAGATTTTTTTTTACTGCTTTTTGTTAAAATTAAAGGAGGAATTAGCGAAAATTAAATACATAAGAGTAAAAGTTGAAACGGGTAGGATCAACTTTCATAGAATTAAAAGTTTAATATAAAAATTGATATATATGTTTGATAAGTATAGGAGTAAATTTTTTTTTTGGCCCCTATTTTTAAGCAATATTTATATTGGTAACATAATTTGATGGGTTTTATTTGATGGCAGGACTTCACCCAATGTCCATGATTTTGAAATCTCAAACTCCACTCTCACACATTTCTCTGATACATTCAATCGGTTGCTCTACAACTTCTTTGAAATTTCAAGTGGCCATAACTTTAAGCTATTTGCAACGGTACCCACCCAAATCTAATAATTTATATTCATCCCTTCCAAACTTTTTATTTTAATGCTCTGTGTGTTTTTGCTTCATGATAAATCACTTTTAAAATGTTTTTAAAATGCATGCCAAAATATTCTATTAAGTAATTTTTCATAAGACACCCTAAAACAACTTCGCCAATATACAAATTAACTTCATTTTTGTATTGTGTTTAATTGACCCCTTAATTCTAAAATGTACTTAATAGATTCATGAACTTTTCAATTTTGTGTCTAATTATAAGTTTTATTCTTTAAAAATATCTAATAGGTTCTTAAACTTTCAATGTTGTGTTTGTGTCTTATAAATCTCTTATATATCTAGTTGATACTTTTTAAAATCCATAACTCTATATTAGATACAAAATTGAATTTTGTGACTAATAGAAATACTAACCTTTTAATTTTGTGGCTACAAAGCCCATGAATTTTATAAAAAAAAAATCTAATAGACTAGAGATTTAATAGACACTAAATTAAAATGTCAAGAGCTTATGAGAGACCTTTAAAATTCACAGACTTATATCTAACACAGATTTGAAAGTATAGAAAATATTAGACACTTTTTTAAAGTTACAAGACTTATTAACCACAACCTTAAACGGGTTGTTTGAGGCACGAAGTAAGTTATAATAGTTTGATGAGTAGTCCGTGAAGTTATATATAATATATGATTAGGATGCAGAGTTATTTAATCTGGATTATAATAGTTTGTATTTGAGGTGTAAAACCAGATTATTGTAACTCTCACTCAACGTCTGAAACTAGTCCTAAAAGTCTAATATTTAAAGTCGTTTTTTTTTTAATACAACAATTGCGAGGAGTGGGAGATCCAACTATCAATAAGATGGTAATTAGTGCCTAGTTTATCCATTAACCTAAACTCAGATTGACTTTAAACTCATAATTTAACCTCAAAACTTCATTAAAAAAAAAAAAACTCTAAACAAGAGCTTAAGAACATTTAGAAACTAATTAAACAAACTAGCTAATAGTAATTTTGTTATTGCAGGTAATAGGTAGCCTTTGGTTGTTATCCTTCATTGGGAAATTAGGCAGCTCATTGAATCTCATGTACATGGGTACAATCTCTTTCTTCTCTCTCTCTTTGTACTGAAAAATTGACATTTTTGTTTTTAATTAATTTTTATAAATTTAATGTTGGAACAGTGTTTGTGAGCTTACAAATAGTTTCTGTTCTGTACGACAAGTACGAGGAGGAGTTTCATGAAGTTGCCTCTCAGCTCAAATCTAACATGGATGCCTTTTACCACACCTTCGACTCCAATCTTCTCAGCAAAATCCCAAGGACGACCGACCAAATCAAACAAAGTTAA

mRNA sequence

ATGTCCAACTCCGGTGACCGTCGGAGGTTTCTGCATTCCATTTTTGGTGATGGCAAAGTGGCGGAGATAATGTTGTGGAAGAACAAGAGAGAATCGGCGGCGATTTTGGCCGGAATCAGCGGCGTTTGGTTGCTGTTTGAGGTTTTAGATTACCATTTTGTTACTCTTCTTTCTCATCTACTCATCATTGTTATGCTCCTTCTCTTCTCTTGGAACAAATTGGCTCTTTTCACCCACTGGACTTCACCCAATGTCCATGATTTTGAAATCTCAAACTCCACTCTCACACATTTCTCTGATACATTCAATCGGTTGCTCTACAACTTCTTTGAAATTTCAAGTGGCCATAACTTTAAGCTATTTGCAACGGTAATAGGTAGCCTTTGGTTGTTATCCTTCATTGGGAAATTAGGCAGCTCATTGAATCTCATGTACATGGTGTTTGTGAGCTTACAAATAGTTTCTGTTCTGTACGACAAGTACGAGGAGGAGTTTCATGAAGTTGCCTCTCAGCTCAAATCTAACATGGATGCCTTTTACCACACCTTCGACTCCAATCTTCTCAGCAAAATCCCAAGGACGACCGACCAAATCAAACAAAGTTAA

Coding sequence (CDS)

ATGTCCAACTCCGGTGACCGTCGGAGGTTTCTGCATTCCATTTTTGGTGATGGCAAAGTGGCGGAGATAATGTTGTGGAAGAACAAGAGAGAATCGGCGGCGATTTTGGCCGGAATCAGCGGCGTTTGGTTGCTGTTTGAGGTTTTAGATTACCATTTTGTTACTCTTCTTTCTCATCTACTCATCATTGTTATGCTCCTTCTCTTCTCTTGGAACAAATTGGCTCTTTTCACCCACTGGACTTCACCCAATGTCCATGATTTTGAAATCTCAAACTCCACTCTCACACATTTCTCTGATACATTCAATCGGTTGCTCTACAACTTCTTTGAAATTTCAAGTGGCCATAACTTTAAGCTATTTGCAACGGTAATAGGTAGCCTTTGGTTGTTATCCTTCATTGGGAAATTAGGCAGCTCATTGAATCTCATGTACATGGTGTTTGTGAGCTTACAAATAGTTTCTGTTCTGTACGACAAGTACGAGGAGGAGTTTCATGAAGTTGCCTCTCAGCTCAAATCTAACATGGATGCCTTTTACCACACCTTCGACTCCAATCTTCTCAGCAAAATCCCAAGGACGACCGACCAAATCAAACAAAGTTAA

Protein sequence

MSNSGDRRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHLLIIVMLLLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSDTFNRLLYNFFEISSGHNFKLFATVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFYHTFDSNLLSKIPRTTDQIKQS

Homology

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BLAST of Tan0018984.1 vs. ExPASy Swiss-Prot
Match: A2RVT6 (Reticulon-like protein B14 OS=Arabidopsis thaliana OX=3702 GN=RTNLB14 PE=2 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29
Identity = 70/202 (34.65%), Postives = 120/202 (59.41%), Query Frame = 0


Query: 2   SNSGDRRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHLL 61
           ++S  RRR L+   G G+ A+IM WKNK+ES  IL   + +W LFEV++Y F+T L  +L
Sbjct: 13  ASSSRRRRSLYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQIL 72

Query: 62  IIVMLLLFSWNKL--ALFTHWTSPNVHDFEISNSTLTHFSDTFNRLLYNFFEISSGHNFK 121
           ++ + +   W+ +  +       P+++D  IS S      +  N  +   ++ISSG +F+
Sbjct: 73  LLFIFIFLIWSYIGSSQLIQSKPPSINDLRISESNWRFLFNKINWFIIKLYDISSGKDFR 132

Query: 122 LFATVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAF 181
           L    + SLW+LS +G   SSL L+Y+VFV L+ + +LY++YEEE    AS+   +M   
Sbjct: 133 LLFLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKL 192

Query: 182 YHTFDSNLLSKIPRTTDQIKQS 202
            + F+S +++KIP+   + +++
Sbjct: 193 LNKFNSKVINKIPKAQAKTRRT 214

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BLAST of Tan0018984.1 vs. ExPASy Swiss-Prot
Match: Q9LJQ5 (Reticulon-like protein B9 OS=Arabidopsis thaliana OX=3702 GN=RTNLB9 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.9e-29
Identity = 70/198 (35.35%), Postives = 119/198 (60.10%), Query Frame = 0


Query: 7   RRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHLLIIVML 66
           R+R +HSIFG GKVA+I+LW+  + +A ++ G+S +W L EV++Y+F+TL+ H  +  ML
Sbjct: 26  RQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSML 85

Query: 67  LLFSWNKLALFTHWTSPNVHDFEISNSTLTH----FSDTFNRLLYNFFEISSGHNFKLFA 126
             F W+  + F +W  P + +  +  S+       F   FN++L    +++ G +  LF 
Sbjct: 86  FFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFF 145

Query: 127 TVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFYHT 186
               SL+++S IG   + +NL+++ FVS+Q + V+Y+ YE++    A +L   M   Y  
Sbjct: 146 LTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKK 205

Query: 187 FDSNLLSKIPRTTDQIKQ 201
            D+N+LSKIPR T + K+
Sbjct: 206 VDTNVLSKIPRGTVKNKK 223

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BLAST of Tan0018984.1 vs. ExPASy Swiss-Prot
Match: Q9SUT9 (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.2e-27
Identity = 65/191 (34.03%), Postives = 105/191 (54.97%), Query Frame = 0


Query: 7   RRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHLLIIVML 66
           R R +H + G GK A+I +WK+K+ S  +  G +  W+LFE+++YH +TLL H++I+ + 
Sbjct: 72  RERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALA 131

Query: 67  LLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSD----TFNRLLYNFFEISSGHNFKLFA 126
           +LF W+   +F H + P + +  I    L   +       NR + +  EI+SG + K F 
Sbjct: 132 VLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFL 191

Query: 127 TVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFYHT 186
           + I  LW+LS +G   S L L Y+  V L  V + YDKYE++      +  + +   Y  
Sbjct: 192 SAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAV 251

Query: 187 FDSNLLSKIPR 194
            D+ + SKIPR
Sbjct: 252 LDAKVFSKIPR 262

[Close]

BLAST of Tan0018984.1 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.0e-26
Identity = 63/190 (33.16%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 7   RRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHLLIIVML 66
           R + +H + G GK A+I +WKNK+ S  +L G +  W++FE+++YH +TLL H++I+V+ 
Sbjct: 76  REQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLA 135

Query: 67  LLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSD----TFNRLLYNFFEISSGHNFKLFA 126
           +LF W+   +F + + P + +  I    +   +       NR   +  EI+SG + K F 
Sbjct: 136 VLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFL 195

Query: 127 TVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFYHT 186
             I  LW+LS +G   + L L Y+  V L  V + YDKYE++   +  +    +   Y  
Sbjct: 196 IAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAV 255

Query: 187 FDSNLLSKIP 193
            D  +LSKIP
Sbjct: 256 LDEKVLSKIP 265

[Close]

BLAST of Tan0018984.1 vs. ExPASy Swiss-Prot
Match: O82352 (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.3e-23
Identity = 59/190 (31.05%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 7   RRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHLLIIVML 66
           R + +H + G GK A++ LW++K+ S A+L   + +W+LFE+++YH ++LL H+ I+ + 
Sbjct: 55  REKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALG 114

Query: 67  LLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSDTFNRLLYNFF----EISSGHNFKLFA 126
            LF W+      + TSP + +  +        + +    L   F     I+ G + K F 
Sbjct: 115 GLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFL 174

Query: 127 TVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFYHT 186
            V+  LW++S +G   + L L+Y+ FV L  V +LY+K+E++   +A +    +   Y  
Sbjct: 175 MVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVV 234

Query: 187 FDSNLLSKIP 193
           FD  +LSKIP
Sbjct: 235 FDEKVLSKIP 244

[Close]

BLAST of Tan0018984.1 vs. NCBI nr
Match: XP_022945840.1 (reticulon-like protein B14 isoform X3 [Cucurbita moschata])

HSP 1 Score: 280.4 bits (716), Expect = 1.2e-71
Identity = 143/201 (71.14%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 1   MSNSGDRRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHL 60
           MSNSGDR RFLHSIFG GKVAE+MLWK KRESAA+LAGISGVWLL EVLDYHFVTLL +L
Sbjct: 63  MSNSGDRPRFLHSIFGHGKVAELMLWKKKRESAAMLAGISGVWLLLEVLDYHFVTLLCYL 122

Query: 61  LIIVMLLLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSDTFNRLLYNFFEISSGHNFKL 120
           LII MLLLFSWNKLAL  +W  PNVHDFEISN+T T F DT N L+++FF+IS+G NFKL
Sbjct: 123 LIITMLLLFSWNKLALLVNWAPPNVHDFEISNATFTRFFDTVNWLVHHFFQISTGQNFKL 182

Query: 121 FATVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFY 180
           FA V+GS+WL+S IG+L +SLNL+Y+VF+SLQ V ++ DKYEEE H++ S LKS+MD F+
Sbjct: 183 FAMVMGSIWLVSLIGELTNSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFF 242

Query: 181 HTFDSNLLSKIPRTTDQIKQS 202
           HT  SN L+KIPR T  IKQ+
Sbjct: 243 HTLHSNFLTKIPRRT-HIKQT 262

[Close]

BLAST of Tan0018984.1 vs. NCBI nr
Match: XP_022968135.1 (reticulon-like protein B14 [Cucurbita maxima])

HSP 1 Score: 276.6 bits (706), Expect = 1.7e-70
Identity = 142/201 (70.65%), Postives = 168/201 (83.58%), Query Frame = 0


Query: 1   MSNSGDRRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHL 60
           MS+SG R RFLHSIFG GKVAE+MLWK KRESAA+LAGISGVW L EVLDYHFVTLL +L
Sbjct: 1   MSDSGVRPRFLHSIFGHGKVAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYL 60

Query: 61  LIIVMLLLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSDTFNRLLYNFFEISSGHNFKL 120
           LII MLLLFSWNKLAL  +W  P+VHDFEISN+TLTHF DTFN  L++FF+IS+  NFKL
Sbjct: 61  LIITMLLLFSWNKLALLINWAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKL 120

Query: 121 FATVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFY 180
           FA V+GS+WL+S IG+L +SLNL+Y+VF+SLQ V ++ DKYEEE H++ S LKS+MD F+
Sbjct: 121 FAMVMGSIWLVSLIGELMNSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFF 180

Query: 181 HTFDSNLLSKIPRTTDQIKQS 202
           HT  SN LSKIPR T  IKQ+
Sbjct: 181 HTLHSNFLSKIPRRT-HIKQT 200

[Close]

BLAST of Tan0018984.1 vs. NCBI nr
Match: XP_022150651.1 (reticulon-like protein B14 [Momordica charantia])

HSP 1 Score: 246.9 bits (629), Expect = 1.5e-61
Identity = 128/203 (63.05%), Postives = 155/203 (76.35%), Query Frame = 0


Query: 1   MSNSGD----------RRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLD 60
           MS+SGD          R RF+HSI G GKVA++MLWKNK  SAA L G+S VWL+FE L+
Sbjct: 1   MSDSGDYDRRQPRLLRRHRFMHSILGHGKVADMMLWKNKTASAATLVGLSAVWLVFEGLE 60

Query: 61  YHFVTLLSHLLIIVMLLLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSDTFNRLLYNFF 120
           Y FVTLL HLLII+MLLL  WNKLAL  +W  PNVHDF+IS ST  H  D+FN LL+NFF
Sbjct: 61  YPFVTLLCHLLIILMLLLLVWNKLALLANWAPPNVHDFQISESTFRHLFDSFNWLLFNFF 120

Query: 121 EISSGHNFKLFATVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVAS 180
           E+SSGH+FKLFA V+G LWL+S IG+L ++LNL+Y+VFVSLQ V  LYDKYEEE +++  
Sbjct: 121 EVSSGHDFKLFAMVMGGLWLISAIGELANTLNLIYIVFVSLQTVPFLYDKYEEEANQLCV 180

Query: 181 QLKSNMDAFYHTFDSNLLSKIPR 194
           QLKS   +F+H  DSN+LSKIPR
Sbjct: 181 QLKSYFHSFFHALDSNVLSKIPR 203

[Close]

BLAST of Tan0018984.1 vs. NCBI nr
Match: KAG6573940.1 (Reticulon-like protein B14, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 242.7 bits (618), Expect = 2.8e-60
Identity = 123/182 (67.58%), Postives = 151/182 (82.97%), Query Frame = 0


Query: 20  VAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHLLIIVMLLLFSWNKLALFTH 79
           +AE+MLWK KRESA +LAGISGVWLL EVLDYHFVTLL +LLII MLLLFSWNKLAL  +
Sbjct: 109 MAELMLWKKKRESAVMLAGISGVWLLLEVLDYHFVTLLCYLLIITMLLLFSWNKLALLIN 168

Query: 80  WTSPNVHDFEISNSTLTHFSDTFNRLLYNFFEISSGHNFKLFATVIGSLWLLSFIGKLGS 139
           W  PNVHDFEISN+T T F DT N L+++FF++S+G NFKLFA V+GS+WL+S IG+L +
Sbjct: 169 WAPPNVHDFEISNATFTRFFDTVNWLVHHFFQVSTGQNFKLFAMVMGSIWLVSLIGELTN 228

Query: 140 SLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFYHTFDSNLLSKIPRTTDQIK 199
           SLNL+Y+VF+SLQ V ++ DKYEEE H++ S LKS+MD F+HT  SN L+KIPR T  IK
Sbjct: 229 SLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFFHTLHSNFLTKIPRRT-HIK 288

Query: 200 QS 202
           Q+
Sbjct: 289 QT 289

[Close]

BLAST of Tan0018984.1 vs. NCBI nr
Match: KAA0034583.1 (reticulon-like protein B14 [Cucumis melo var. makuwa] >TYK09135.1 reticulon-like protein B14 [Cucumis melo var. makuwa])

HSP 1 Score: 241.9 bits (616), Expect = 4.8e-60
Identity = 129/202 (63.86%), Postives = 161/202 (79.70%), Query Frame = 0


Query: 1   MSNSGDRRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHL 60
           MSN   RR FL+SI G+GKVAE+MLWKNK+ESAA++AG+SGVWL+ EVLDYH +TL+ HL
Sbjct: 1   MSNPHGRRSFLYSILGNGKVAELMLWKNKKESAAMVAGMSGVWLMVEVLDYHLITLICHL 60

Query: 61  LIIVMLLLFSWNKLA-LFTHWTSPNVHDFEISNSTLTHFSDTFNRLLYNFFEISSGHNFK 120
           LII+MLLLF W KLA L   W+ P   D EIS+S+LTH   TFN  L++FF+IS+G++FK
Sbjct: 61  LIILMLLLFLWKKLAFLPVPWSPPTAQDLEISDSSLTHLFQTFNWFLHSFFQISNGNDFK 120

Query: 121 LFATVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAF 180
           LFA V+GSLWLLS IG+L S  +L+Y+VFVSLQ+V V+YDKYEEEF++VAS +KS MD  
Sbjct: 121 LFAMVMGSLWLLSVIGELVSLFDLVYIVFVSLQVVPVVYDKYEEEFNKVASCIKSKMDCC 180

Query: 181 YHTFDSNLLSKIPRTTDQIKQS 202
           +H  DSN L+KIPR    IKQS
Sbjct: 181 FHFIDSNFLTKIPR-WHHIKQS 201

[Close]

BLAST of Tan0018984.1 vs. ExPASy TrEMBL
Match: A0A6J1G247 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449961 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.9e-72
Identity = 143/201 (71.14%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 1   MSNSGDRRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHL 60
           MSNSGDR RFLHSIFG GKVAE+MLWK KRESAA+LAGISGVWLL EVLDYHFVTLL +L
Sbjct: 63  MSNSGDRPRFLHSIFGHGKVAELMLWKKKRESAAMLAGISGVWLLLEVLDYHFVTLLCYL 122

Query: 61  LIIVMLLLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSDTFNRLLYNFFEISSGHNFKL 120
           LII MLLLFSWNKLAL  +W  PNVHDFEISN+T T F DT N L+++FF+IS+G NFKL
Sbjct: 123 LIITMLLLFSWNKLALLVNWAPPNVHDFEISNATFTRFFDTVNWLVHHFFQISTGQNFKL 182

Query: 121 FATVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFY 180
           FA V+GS+WL+S IG+L +SLNL+Y+VF+SLQ V ++ DKYEEE H++ S LKS+MD F+
Sbjct: 183 FAMVMGSIWLVSLIGELTNSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFF 242

Query: 181 HTFDSNLLSKIPRTTDQIKQS 202
           HT  SN L+KIPR T  IKQ+
Sbjct: 243 HTLHSNFLTKIPRRT-HIKQT 262

[Close]

BLAST of Tan0018984.1 vs. ExPASy TrEMBL
Match: A0A6J1HWC4 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467461 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.5e-71
Identity = 142/201 (70.65%), Postives = 168/201 (83.58%), Query Frame = 0


Query: 1   MSNSGDRRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHL 60
           MS+SG R RFLHSIFG GKVAE+MLWK KRESAA+LAGISGVW L EVLDYHFVTLL +L
Sbjct: 1   MSDSGVRPRFLHSIFGHGKVAELMLWKKKRESAAMLAGISGVWFLLEVLDYHFVTLLCYL 60

Query: 61  LIIVMLLLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSDTFNRLLYNFFEISSGHNFKL 120
           LII MLLLFSWNKLAL  +W  P+VHDFEISN+TLTHF DTFN  L++FF+IS+  NFKL
Sbjct: 61  LIITMLLLFSWNKLALLINWAPPSVHDFEISNATLTHFFDTFNWFLHHFFQISTAQNFKL 120

Query: 121 FATVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFY 180
           FA V+GS+WL+S IG+L +SLNL+Y+VF+SLQ V ++ DKYEEE H++ S LKS+MD F+
Sbjct: 121 FAMVMGSIWLVSLIGELMNSLNLIYIVFLSLQTVPIVLDKYEEEIHKLVSNLKSSMDTFF 180

Query: 181 HTFDSNLLSKIPRTTDQIKQS 202
           HT  SN LSKIPR T  IKQ+
Sbjct: 181 HTLHSNFLSKIPRRT-HIKQT 200

[Close]

BLAST of Tan0018984.1 vs. ExPASy TrEMBL
Match: A0A6J1DC54 (Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111018734 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 7.2e-62
Identity = 128/203 (63.05%), Postives = 155/203 (76.35%), Query Frame = 0


Query: 1   MSNSGD----------RRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLD 60
           MS+SGD          R RF+HSI G GKVA++MLWKNK  SAA L G+S VWL+FE L+
Sbjct: 1   MSDSGDYDRRQPRLLRRHRFMHSILGHGKVADMMLWKNKTASAATLVGLSAVWLVFEGLE 60

Query: 61  YHFVTLLSHLLIIVMLLLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSDTFNRLLYNFF 120
           Y FVTLL HLLII+MLLL  WNKLAL  +W  PNVHDF+IS ST  H  D+FN LL+NFF
Sbjct: 61  YPFVTLLCHLLIILMLLLLVWNKLALLANWAPPNVHDFQISESTFRHLFDSFNWLLFNFF 120

Query: 121 EISSGHNFKLFATVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVAS 180
           E+SSGH+FKLFA V+G LWL+S IG+L ++LNL+Y+VFVSLQ V  LYDKYEEE +++  
Sbjct: 121 EVSSGHDFKLFAMVMGGLWLISAIGELANTLNLIYIVFVSLQTVPFLYDKYEEEANQLCV 180

Query: 181 QLKSNMDAFYHTFDSNLLSKIPR 194
           QLKS   +F+H  DSN+LSKIPR
Sbjct: 181 QLKSYFHSFFHALDSNVLSKIPR 203

[Close]

BLAST of Tan0018984.1 vs. ExPASy TrEMBL
Match: A0A5D3CCB1 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001260 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 2.3e-60
Identity = 129/202 (63.86%), Postives = 161/202 (79.70%), Query Frame = 0


Query: 1   MSNSGDRRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHL 60
           MSN   RR FL+SI G+GKVAE+MLWKNK+ESAA++AG+SGVWL+ EVLDYH +TL+ HL
Sbjct: 1   MSNPHGRRSFLYSILGNGKVAELMLWKNKKESAAMVAGMSGVWLMVEVLDYHLITLICHL 60

Query: 61  LIIVMLLLFSWNKLA-LFTHWTSPNVHDFEISNSTLTHFSDTFNRLLYNFFEISSGHNFK 120
           LII+MLLLF W KLA L   W+ P   D EIS+S+LTH   TFN  L++FF+IS+G++FK
Sbjct: 61  LIILMLLLFLWKKLAFLPVPWSPPTAQDLEISDSSLTHLFQTFNWFLHSFFQISNGNDFK 120

Query: 121 LFATVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAF 180
           LFA V+GSLWLLS IG+L S  +L+Y+VFVSLQ+V V+YDKYEEEF++VAS +KS MD  
Sbjct: 121 LFAMVMGSLWLLSVIGELVSLFDLVYIVFVSLQVVPVVYDKYEEEFNKVASCIKSKMDCC 180

Query: 181 YHTFDSNLLSKIPRTTDQIKQS 202
           +H  DSN L+KIPR    IKQS
Sbjct: 181 FHFIDSNFLTKIPR-WHHIKQS 201

[Close]

BLAST of Tan0018984.1 vs. ExPASy TrEMBL
Match: A0A5N6RF69 (Reticulon-like protein OS=Carpinus fangiana OX=176857 GN=FH972_015839 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.4e-41
Identity = 93/187 (49.73%), Postives = 126/187 (67.38%), Query Frame = 0


Query: 7   RRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHLLIIVML 66
           R R LH+I G GKVA+I+LWKN + SAAILAG + +WLLFEV +Y FVTLL HLLII ML
Sbjct: 21  RERSLHNILGGGKVADILLWKNTKLSAAILAGFTTIWLLFEVAEYQFVTLLCHLLIITML 80

Query: 67  LLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSDTFNRLLYNFFEISSGHNFKLFATVIG 126
           ++F W+K A F     PN+ +  +S ST  H     N  LY F+EISSG + K F   + 
Sbjct: 81  IIFIWSKAAGFIDRRPPNIQEIRLSESTWRHLFTNVNWFLYKFYEISSGKDLKHFFLAVS 140

Query: 127 SLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFYHTFDSN 186
            LW+LS +G   SSLNL Y+ F+ +Q + VLY++YE+E +  A++   ++  +Y  FDSN
Sbjct: 141 CLWMLSVVGTYFSSLNLSYIAFLCIQTLPVLYERYEKEVNYFATKSNQDVKKWYRKFDSN 200

Query: 187 LLSKIPR 194
           +L+KIPR
Sbjct: 201 VLNKIPR 207

[Close]

BLAST of Tan0018984.1 vs. TAIR 10
Match: AT3G18260.1 (Reticulon family protein )

HSP 1 Score: 129.0 bits (323), Expect = 4.2e-30
Identity = 70/198 (35.35%), Postives = 119/198 (60.10%), Query Frame = 0


Query: 7   RRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHLLIIVML 66
           R+R +HSIFG GKVA+I+LW+  + +A ++ G+S +W L EV++Y+F+TL+ H  +  ML
Sbjct: 26  RQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSML 85

Query: 67  LLFSWNKLALFTHWTSPNVHDFEISNSTLTH----FSDTFNRLLYNFFEISSGHNFKLFA 126
             F W+  + F +W  P + +  +  S+       F   FN++L    +++ G +  LF 
Sbjct: 86  FFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFF 145

Query: 127 TVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFYHT 186
               SL+++S IG   + +NL+++ FVS+Q + V+Y+ YE++    A +L   M   Y  
Sbjct: 146 LTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKK 205

Query: 187 FDSNLLSKIPRTTDQIKQ 201
            D+N+LSKIPR T + K+
Sbjct: 206 VDTNVLSKIPRGTVKNKK 223

[Close]

BLAST of Tan0018984.1 vs. TAIR 10
Match: AT4G11220.1 (VIRB2-interacting protein 2 )

HSP 1 Score: 123.2 bits (308), Expect = 2.3e-28
Identity = 65/191 (34.03%), Postives = 105/191 (54.97%), Query Frame = 0


Query: 7   RRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHLLIIVML 66
           R R +H + G GK A+I +WK+K+ S  +  G +  W+LFE+++YH +TLL H++I+ + 
Sbjct: 72  RERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALA 131

Query: 67  LLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSD----TFNRLLYNFFEISSGHNFKLFA 126
           +LF W+   +F H + P + +  I    L   +       NR + +  EI+SG + K F 
Sbjct: 132 VLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFL 191

Query: 127 TVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFYHT 186
           + I  LW+LS +G   S L L Y+  V L  V + YDKYE++      +  + +   Y  
Sbjct: 192 SAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAV 251

Query: 187 FDSNLLSKIPR 194
            D+ + SKIPR
Sbjct: 252 LDAKVFSKIPR 262

[Close]

BLAST of Tan0018984.1 vs. TAIR 10
Match: AT4G23630.1 (VIRB2-interacting protein 1 )

HSP 1 Score: 118.6 bits (296), Expect = 5.7e-27
Identity = 63/190 (33.16%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 7   RRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHLLIIVML 66
           R + +H + G GK A+I +WKNK+ S  +L G +  W++FE+++YH +TLL H++I+V+ 
Sbjct: 76  REQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLA 135

Query: 67  LLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSD----TFNRLLYNFFEISSGHNFKLFA 126
           +LF W+   +F + + P + +  I    +   +       NR   +  EI+SG + K F 
Sbjct: 136 VLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFL 195

Query: 127 TVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFYHT 186
             I  LW+LS +G   + L L Y+  V L  V + YDKYE++   +  +    +   Y  
Sbjct: 196 IAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAV 255

Query: 187 FDSNLLSKIP 193
            D  +LSKIP
Sbjct: 256 LDEKVLSKIP 265

[Close]

BLAST of Tan0018984.1 vs. TAIR 10
Match: AT2G46170.1 (Reticulon family protein )

HSP 1 Score: 109.0 bits (271), Expect = 4.5e-24
Identity = 59/190 (31.05%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 7   RRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHLLIIVML 66
           R + +H + G GK A++ LW++K+ S A+L   + +W+LFE+++YH ++LL H+ I+ + 
Sbjct: 55  REKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALG 114

Query: 67  LLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSDTFNRLLYNFF----EISSGHNFKLFA 126
            LF W+      + TSP + +  +        + +    L   F     I+ G + K F 
Sbjct: 115 GLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFL 174

Query: 127 TVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFYHT 186
            V+  LW++S +G   + L L+Y+ FV L  V +LY+K+E++   +A +    +   Y  
Sbjct: 175 MVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVV 234

Query: 187 FDSNLLSKIP 193
           FD  +LSKIP
Sbjct: 235 FDEKVLSKIP 244

[Close]

BLAST of Tan0018984.1 vs. TAIR 10
Match: AT1G64090.1 (Reticulan like protein B3 )

HSP 1 Score: 108.6 bits (270), Expect = 5.9e-24
Identity = 62/189 (32.80%), Postives = 103/189 (54.50%), Query Frame = 0


Query: 7   RRRFLHSIFGDGKVAEIMLWKNKRESAAILAGISGVWLLFEVLDYHFVTLLSHLLIIVML 66
           R + LH +FG GK A+I LW+NK+ S  +L   +  W+LFE+L+Y+ +TL  H+ I+ + 
Sbjct: 51  REQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALA 110

Query: 67  LLFSWNKLALFTHWTSPNVHDFEISNSTLTHFSD----TFNRLLYNFFEISSGHNFKLFA 126
           +LF W+  + F H +  ++ +  I    +   +       NR      +I+SG + K F 
Sbjct: 111 VLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFL 170

Query: 127 TVIGSLWLLSFIGKLGSSLNLMYMVFVSLQIVSVLYDKYEEEFHEVASQLKSNMDAFYHT 186
            VI  LW+LS +G   + L L+Y+  V L  + VLY+KYE++  +   +    +   Y  
Sbjct: 171 LVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVE 230

Query: 187 FDSNLLSKI 192
           FD  +LSK+
Sbjct: 231 FDVKVLSKV 239

The following BLAST results are available for this feature:

BLAST of Tan0018984.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2RVT6	1.2e-29	34.65	Reticulon-like protein B14 OS=Arabidopsis thaliana OX=3702 GN=RTNLB14 PE=2 SV=2	[more]
Q9LJQ5	5.9e-29	35.35	Reticulon-like protein B9 OS=Arabidopsis thaliana OX=3702 GN=RTNLB9 PE=2 SV=1	[more]
Q9SUT9	3.2e-27	34.03	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]
Q9SUR3	8.0e-26	33.16	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]
O82352	6.3e-23	31.05	Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1	[more]

BLAST of Tan0018984.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945840.1	1.2e-71	71.14	reticulon-like protein B14 isoform X3 [Cucurbita moschata]	[more]
XP_022968135.1	1.7e-70	70.65	reticulon-like protein B14 [Cucurbita maxima]	[more]
XP_022150651.1	1.5e-61	63.05	reticulon-like protein B14 [Momordica charantia]	[more]
KAG6573940.1	2.8e-60	67.58	Reticulon-like protein B14, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAA0034583.1	4.8e-60	63.86	reticulon-like protein B14 [Cucumis melo var. makuwa] >TYK09135.1 reticulon-like...	[more]

BLAST of Tan0018984.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G247	5.9e-72	71.14	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449961 PE=4 SV=1	[more]
A0A6J1HWC4	8.5e-71	70.65	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467461 PE=4 SV=1	[more]
A0A6J1DC54	7.2e-62	63.05	Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111018734 PE=4 SV=1	[more]
A0A5D3CCB1	2.3e-60	63.86	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]
A0A5N6RF69	2.4e-41	49.73	Reticulon-like protein OS=Carpinus fangiana OX=176857 GN=FH972_015839 PE=4 SV=1	[more]

BLAST of Tan0018984.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18260.1	4.2e-30	35.35	Reticulon family protein	[more]
AT4G11220.1	2.3e-28	34.03	VIRB2-interacting protein 2	[more]
AT4G23630.1	5.7e-27	33.16	VIRB2-interacting protein 1	[more]
AT2G46170.1	4.5e-24	31.05	Reticulon family protein	[more]
AT1G64090.1	5.9e-24	32.80	Reticulan like protein B3	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 20..171 e-value: 3.8E-36 score: 124.4
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 20..201 score: 22.615847
None	No IPR available	PANTHER	PTHR10994:SF157	RETICULON-LIKE PROTEIN B14	coord: 6..197
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 6..197

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0018984	Tan0018984	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0018984.1-exon	Tan0018984.1-exon-LG04:6948521..6948687	exon
Tan0018984.1-exon	Tan0018984.1-exon-LG04:6948776..6948845	exon
Tan0018984.1-exon	Tan0018984.1-exon-LG04:6949884..6950013	exon
Tan0018984.1-exon	Tan0018984.1-exon-LG04:6950644..6950824	exon
Tan0018984.1-exon	Tan0018984.1-exon-LG04:6951785..6951842	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0018984.1-cds	Tan0018984.1-cds-LG04:6948521..6948687	CDS
Tan0018984.1-cds	Tan0018984.1-cds-LG04:6948776..6948845	CDS
Tan0018984.1-cds	Tan0018984.1-cds-LG04:6949884..6950013	CDS
Tan0018984.1-cds	Tan0018984.1-cds-LG04:6950644..6950824	CDS
Tan0018984.1-cds	Tan0018984.1-cds-LG04:6951785..6951842	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0018984.1	Tan0018984.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane