Tan0017011.1 (mRNA) Snake gourd v1

Overview


Name	Tan0017011.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	F-box protein
Location	LG08: 8724799 .. 8725920 (+)
Sequence length	1122
RNA-Seq Expression	Tan0017011.1
Synteny	Tan0017011.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAGAAGAATGAGAAGAAGATGAAAAACAACTGCTTACCAGAGGAAATAATAATCGAAGTCCTTCAACGTTCATCTCTAACATCACTCGCTACCGTAAGCTGCGTCTCAAAGCTCTGGCACACCTTAATTTCCACCAAAACTCTCATTTTTGGAACTCCATTCTCCCCTCCTCTGCAACACGGCTTCTTGTTCCAGCTTCGCCAATTCAGCCACCCCACCGATCGCTTCCCACTTCACTTCTTCCCCACTTCTCCCAACGCTCCGATCAAAACCCCTTCCCGCTGCCGCCGCATCCTCGCCGCCAGCAACGGTCTCATCCTCTTCGCCAAATCTGAAAAGGGCCCCACCCATCACTACTCTGTTTGGAACCCTGTCTCCAATCGCCTCACTAAAATCCCCACAACTAAGAATTGCTCCTTCACCTCCAAAATCGCCTTCCATTCCCACGATTCCGTTTCCTTCCTCATCATTCGATTTGGCCATTTCGGAAACTGTGAAGTCGACATTTTCTCCTCTGAAAAAGGGCGGTGGGGGTCACTCCTCTTCTTCAATTCTCCCCTCGACTCCACGTTTCAACTCTTCTCTTGCCCCCCGGCCGCCGTTCTCAAAGGGGTGTTTTACTGGTTGCAGTCTGAGTGGAATGTCTACGCTCTGGATTTGCTCAACAATCAGGTTTATTATCTGGCGTGTCCCCCTGAGGAAACAGAGTATCGTCGGGCTGTGTTCTTCCGCTGCCTCGCCGTCGCCGGCGGGTCGGTGGTGATGGCGTCCACCGATGGGAAGTTCATTGAGATTTGGGTTTTGCAGGAGTGGACTCGTTCGTGGGATTTCAAGTGTAGATTGAGCGTTGAAACTCTTGCTATCAATAACGCAAACATCTTGTATGCAAGTTTTGAAGCGGCGGCGGCTGAGGCGATGACGGGAGGTGGCTGGAATTTTTTGGGGATTGTGGGGTTTCATCCATGGGATTCGGAGAGGATTTACTTGAACACGACGGAGATGGTGGTTTGTTGTGATGTTGGAAGTGGAAAGGTTGAGATTGTTCATAGATTTGATAGGGACTTGAAACTTACGGATGTTACTGATTTCACGTTCATTCCTTATCAGTCCGGTTAG

mRNA sequence

ATGGCAGAGAAGAATGAGAAGAAGATGAAAAACAACTGCTTACCAGAGGAAATAATAATCGAAGTCCTTCAACGTTCATCTCTAACATCACTCGCTACCGTAAGCTGCGTCTCAAAGCTCTGGCACACCTTAATTTCCACCAAAACTCTCATTTTTGGAACTCCATTCTCCCCTCCTCTGCAACACGGCTTCTTGTTCCAGCTTCGCCAATTCAGCCACCCCACCGATCGCTTCCCACTTCACTTCTTCCCCACTTCTCCCAACGCTCCGATCAAAACCCCTTCCCGCTGCCGCCGCATCCTCGCCGCCAGCAACGGTCTCATCCTCTTCGCCAAATCTGAAAAGGGCCCCACCCATCACTACTCTGTTTGGAACCCTGTCTCCAATCGCCTCACTAAAATCCCCACAACTAAGAATTGCTCCTTCACCTCCAAAATCGCCTTCCATTCCCACGATTCCGTTTCCTTCCTCATCATTCGATTTGGCCATTTCGGAAACTGTGAAGTCGACATTTTCTCCTCTGAAAAAGGGCGGTGGGGGTCACTCCTCTTCTTCAATTCTCCCCTCGACTCCACGTTTCAACTCTTCTCTTGCCCCCCGGCCGCCGTTCTCAAAGGGGTGTTTTACTGGTTGCAGTCTGAGTGGAATGTCTACGCTCTGGATTTGCTCAACAATCAGGTTTATTATCTGGCGTGTCCCCCTGAGGAAACAGAGTATCGTCGGGCTGTGTTCTTCCGCTGCCTCGCCGTCGCCGGCGGGTCGGTGGTGATGGCGTCCACCGATGGGAAGTTCATTGAGATTTGGGTTTTGCAGGAGTGGACTCGTTCGTGGGATTTCAAGTGTAGATTGAGCGTTGAAACTCTTGCTATCAATAACGCAAACATCTTGTATGCAAGTTTTGAAGCGGCGGCGGCTGAGGCGATGACGGGAGGTGGCTGGAATTTTTTGGGGATTGTGGGGTTTCATCCATGGGATTCGGAGAGGATTTACTTGAACACGACGGAGATGGTGGTTTGTTGTGATGTTGGAAGTGGAAAGGTTGAGATTGTTCATAGATTTGATAGGGACTTGAAACTTACGGATGTTACTGATTTCACGTTCATTCCTTATCAGTCCGGTTAG

Coding sequence (CDS)

ATGGCAGAGAAGAATGAGAAGAAGATGAAAAACAACTGCTTACCAGAGGAAATAATAATCGAAGTCCTTCAACGTTCATCTCTAACATCACTCGCTACCGTAAGCTGCGTCTCAAAGCTCTGGCACACCTTAATTTCCACCAAAACTCTCATTTTTGGAACTCCATTCTCCCCTCCTCTGCAACACGGCTTCTTGTTCCAGCTTCGCCAATTCAGCCACCCCACCGATCGCTTCCCACTTCACTTCTTCCCCACTTCTCCCAACGCTCCGATCAAAACCCCTTCCCGCTGCCGCCGCATCCTCGCCGCCAGCAACGGTCTCATCCTCTTCGCCAAATCTGAAAAGGGCCCCACCCATCACTACTCTGTTTGGAACCCTGTCTCCAATCGCCTCACTAAAATCCCCACAACTAAGAATTGCTCCTTCACCTCCAAAATCGCCTTCCATTCCCACGATTCCGTTTCCTTCCTCATCATTCGATTTGGCCATTTCGGAAACTGTGAAGTCGACATTTTCTCCTCTGAAAAAGGGCGGTGGGGGTCACTCCTCTTCTTCAATTCTCCCCTCGACTCCACGTTTCAACTCTTCTCTTGCCCCCCGGCCGCCGTTCTCAAAGGGGTGTTTTACTGGTTGCAGTCTGAGTGGAATGTCTACGCTCTGGATTTGCTCAACAATCAGGTTTATTATCTGGCGTGTCCCCCTGAGGAAACAGAGTATCGTCGGGCTGTGTTCTTCCGCTGCCTCGCCGTCGCCGGCGGGTCGGTGGTGATGGCGTCCACCGATGGGAAGTTCATTGAGATTTGGGTTTTGCAGGAGTGGACTCGTTCGTGGGATTTCAAGTGTAGATTGAGCGTTGAAACTCTTGCTATCAATAACGCAAACATCTTGTATGCAAGTTTTGAAGCGGCGGCGGCTGAGGCGATGACGGGAGGTGGCTGGAATTTTTTGGGGATTGTGGGGTTTCATCCATGGGATTCGGAGAGGATTTACTTGAACACGACGGAGATGGTGGTTTGTTGTGATGTTGGAAGTGGAAAGGTTGAGATTGTTCATAGATTTGATAGGGACTTGAAACTTACGGATGTTACTGATTTCACGTTCATTCCTTATCAGTCCGGTTAG

Protein sequence

MAEKNEKKMKNNCLPEEIIIEVLQRSSLTSLATVSCVSKLWHTLISTKTLIFGTPFSPPLQHGFLFQLRQFSHPTDRFPLHFFPTSPNAPIKTPSRCRRILAASNGLILFAKSEKGPTHHYSVWNPVSNRLTKIPTTKNCSFTSKIAFHSHDSVSFLIIRFGHFGNCEVDIFSSEKGRWGSLLFFNSPLDSTFQLFSCPPAAVLKGVFYWLQSEWNVYALDLLNNQVYYLACPPEETEYRRAVFFRCLAVAGGSVVMASTDGKFIEIWVLQEWTRSWDFKCRLSVETLAINNANILYASFEAAAAEAMTGGGWNFLGIVGFHPWDSERIYLNTTEMVVCCDVGSGKVEIVHRFDRDLKLTDVTDFTFIPYQSG

Homology

[Close]

BLAST of Tan0017011.1 vs. ExPASy Swiss-Prot
Match: Q9LSV6 (Putative F-box protein At3g25460 OS=Arabidopsis thaliana OX=3702 GN=At3g25460 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04
Identity = 64/280 (22.86%), Postives = 106/280 (37.86%), Query Frame = 0


Query: 14  LPEEIIIEVLQRSSLTSLATVSCVSKLWHTLISTKTLIFGTPFSPPLQHGFLFQLRQFSH 73
           LPE++++E+L R   TSL  +    KLW+ L + K          P Q   +   + F  
Sbjct: 6   LPEDLLVEILCRVPATSLKRLRSTCKLWNHLYNDKRFKSKHCHKAPRQ-SLILMWKNFGF 65

Query: 74  PTDRFPLHFFPTSPNAPIKTPSRCRRI-------------LAASNGLILFAKSEKGPTHH 133
            +    L        +PI+       I             L  ++GL+L    EK  T  
Sbjct: 66  SSISINLQRV-----SPIEVTGELNLIDHHSSLGMFRNSPLCQTSGLLLCVNVEKINT-R 125

Query: 134 YSVWNPVSNRLTKIPTTKNCSFTSKIAFHSH-----DSVSFLIIRFGHFGNCEVDIFSSE 193
             VWNP + + TK    +   +    A  S+     D+ S+ I+  G +G  E +I+   
Sbjct: 126 LVVWNPCTGK-TKWIQHRRMGYICNYALGSYQDKKSDNNSYKILSHGIYGGQEFEIYEIN 185

Query: 194 KGRWGSLLFFNSPLDSTFQLFSCPPAAVLKGVFYWLQSEWNVYALDLL------NNQVYY 253
              W  L   +  +DS+  + +      LKG  YW  ++ N    DL         + + 
Sbjct: 186 SNSWRIL---DVTVDSSLYIEN----VSLKGKTYWFATDGNDKPCDLFLICFDYTTERFE 245

Query: 254 LACPPEETEYRRAVFFRCLAVAGGSVVMASTDGKFIEIWV 270
             C P +  Y R      +     SV++  +     +IWV
Sbjct: 246 RLCLPYQIPYFRNTSLSVVKEEKLSVLLQPSLTSKTQIWV 270

[Close]

BLAST of Tan0017011.1 vs. ExPASy Swiss-Prot
Match: Q9LV12 (Putative F-box protein At5g62660 OS=Arabidopsis thaliana OX=3702 GN=At5g62660 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 9.3e-04
Identity = 67/301 (22.26%), Postives = 119/301 (39.53%), Query Frame = 0


Query: 14  LPEEIIIEVLQRSSLTSLATVSCVSKLWHTLISTK-----TLIFGTPFSPP------LQH 73
           +P +++IE+L +    SL    CVSKLW +LI ++      L   TP  PP      + H
Sbjct: 41  IPLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYLTVKTPRRPPRLYMSLVDH 100

Query: 74  GFLFQLRQFSHPTDRFPLHFFPTSPNAP--IKTPSRCRRILAASNGLILFAKSEKGPTHH 133
                L    +P +   L    ++ +    +       R +    GLIL+          
Sbjct: 101 LLCNSLMVCHYPCESVLLSSSSSAESLEQNLTIAGMGGRNMVVLRGLILYVVCRTA---- 160

Query: 134 YSVWNPVSNRLTKIPTTKN------CSFTSKIAFHSHDSV--SFLIIRFGHFGNCEVDIF 193
            S++NP + +   +P  K+        + S + F  +D V   + ++       C V +F
Sbjct: 161 -SIYNPTTRQSVTLPAVKSNILAQKSHWNSLLYFFGYDPVLDQYKVV-------CTVALF 220

Query: 194 SSEKGRWGS--LLFFNSPLDSTFQLFSCPP------AAVLKGVFYWLQSEWN----VYAL 253
           S    R  S   +F   P  S  ++    P         + GV Y+L S W     V + 
Sbjct: 221 SKRLKRITSEHWVFVLEPGGSWKRIEFDQPHLPTRLGLCVNGVIYYLASTWKRRDIVVSF 280

Query: 254 DLLNNQVYYLACPPEETEYRRAVFFRCLAVAGGSVVMASTDGK---FIEIWVLQE---WT 276
           D+ + +   +  P + + +  +V F  +   G   V   T  K    +++WVL++   W+
Sbjct: 281 DVRSEEFSMIQGPLKVSAFSESVGF--IEYGGKPAVFDYTMMKQTGLVDLWVLEDAGKWS 327

[Close]

BLAST of Tan0017011.1 vs. NCBI nr
Match: XP_038888571.1 (putative F-box protein At1g32420 [Benincasa hispida])

HSP 1 Score: 362.5 bits (929), Expect = 4.5e-96
Identity = 197/363 (54.27%), Postives = 247/363 (68.04%), Query Frame = 0


Query: 11  NNCLPEEIIIEVLQRSSLTSLATVSCVSKLWHTLISTKTLIFGTPFSPPLQHGFLFQLRQ 70
           NN L ++I IE+LQ  SL SLA  +CVSKLW + ISTK+L+  TP SPP++HGF F   Q
Sbjct: 6   NNPLTDDITIEILQHFSLRSLAVANCVSKLWQSFISTKSLLH-TPLSPPIRHGFFF---Q 65

Query: 71  FSH-PTDRFPLHFFPTSPNAPIKTPSRCRRILAASNGLILFAKSEKGPTHHYSVWNPVSN 130
            SH P +  P+HFFP+SP +  KT     R+LA+SNGL+L  K  + P  HYSV+NP +N
Sbjct: 66  SSHIPKNGVPIHFFPSSPTSLNKTHFPNLRLLASSNGLLLCGKPNQNPIIHYSVFNPSTN 125

Query: 131 RLTKIPTTKNCSFTSKIAFHSHDSVSFLIIRFGHFGNCEVDIFSSEKGRWGSLLFFNSPL 190
           +L  IP   N     KI FHSH+SV+F I+RF +FG   ++IF+SE G W  L  F+  +
Sbjct: 126 QLIPIPKPTNLIAAVKIGFHSHNSVAFTILRFVNFGIRPMEIFTSETGEWRRLC-FDLVI 185

Query: 191 DSTFQLFSCPPAAVLKGVFYWLQSEWNVYALDLLNNQVYYLACPPEETEYRRAVFFRCLA 250
           DS F  F  P AAVL GVFYWL+ +  +YA DLL N+ + +  P EETEYRR    RCLA
Sbjct: 186 DSLFLPFEGPSAAVLNGVFYWLEFDSFIYAFDLLRNEFFEMEFPTEETEYRRNALSRCLA 245

Query: 251 VAGGSVVMASTDGKFIEIWVLQEWTRSWDFKCRLSVETLAINNANILYASFEAAAAEAMT 310
           V GG ++MASTDG+F+EI VLQ+   SW  KCRLSVETL   NAN L A+  AAAA+   
Sbjct: 246 VTGGRLLMASTDGEFVEIRVLQDRDCSWGLKCRLSVETLVGINANTLCAT--AAAADRR- 305

Query: 311 GGGWNFLGIVGFHPWDSERIYLNTTEMVVCCDVGSGKVEIVHRFDRDLKLTDVTDFTFIP 370
                F+GIVGF   DSERIYLNTTE+V+CCD+ +GKVEIVHRFD  L  TDV++F F P
Sbjct: 306 ----KFIGIVGFQGRDSERIYLNTTEVVICCDIETGKVEIVHRFDASLGCTDVSNFRFFP 356

Query: 371 YQS 373
           Y+S
Sbjct: 366 YES 356

[Close]

BLAST of Tan0017011.1 vs. NCBI nr
Match: XP_022931048.1 (F-box protein At1g52495-like [Cucurbita moschata])

HSP 1 Score: 358.6 bits (919), Expect = 6.5e-95
Identity = 196/359 (54.60%), Postives = 234/359 (65.18%), Query Frame = 0


Query: 14  LPEEIIIEVLQRSSLTSLATVSCVSKLWHTLISTKTLIFGTPFSPPLQHGFLFQLRQFSH 73
           LPE+IIIE+L+  SL SLA  +CVSKLW T IST  L+     S PL HGF FQ    S 
Sbjct: 58  LPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFFFQGSTIS- 117

Query: 74  PTDRFPLHFFPTSPNAPIKTPSRCRRILAASNGLILFAKSEKGPTHHYSVWNPVSNRLTK 133
             +  P+HFFP+S N      +   +++A+SNGL+L  KS + P  +YSVWNP SNRL  
Sbjct: 118 -KNGVPIHFFPSSLNI---LNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNPTSNRLIP 177

Query: 134 IPTTKNCSFTSKIAFHSHDSVSFLIIRFGHFGNCEVDIFSSEKGRWGSLLFFNSPLDSTF 193
           IP  +N     KI FHSHDSVSF I+RFG+ G   ++IFSSE G W  L  FN  +DS F
Sbjct: 178 IPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLA-FNLAMDSLF 237

Query: 194 QLFSCPPAAVLKGVFYWLQSEWNVYALDLLNNQVYYLACPPEETEYRRAVFFRCLAVAGG 253
             F  P A VL GVFYWL+    +YA DLL N+   +  P EE EYRR VF RCLAVAGG
Sbjct: 238 LPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGG 297

Query: 254 SVVMASTDGKFIEIWVLQEWTRS-WDFKCRLSVETLAINNANILYASFEAAAAEAMTGGG 313
            VVMAST+G+ IEIW+LQ+   S W  K RL+VE+L    AN L A    AA       G
Sbjct: 298 EVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAV------G 357

Query: 314 WNFLGIVGFHPWDSERIYLNTTEMVVCCDVGSGKVEIVHRFDRDLKLTDVTDFTFIPYQ 372
              +GIVGF  WDSERIYLNTTE+VVCCD+GSGKVEIVHRFD  L  TDV+DF F+PY+
Sbjct: 358 RRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE 404

[Close]

BLAST of Tan0017011.1 vs. NCBI nr
Match: KAG7036294.1 (hypothetical protein SDJN02_03097, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358.6 bits (919), Expect = 6.5e-95
Identity = 196/359 (54.60%), Postives = 234/359 (65.18%), Query Frame = 0


Query: 14  LPEEIIIEVLQRSSLTSLATVSCVSKLWHTLISTKTLIFGTPFSPPLQHGFLFQLRQFSH 73
           LPE+IIIE+L+  SL SLA  +CVSKLW T IST  L+     S PL HGF FQ    S 
Sbjct: 58  LPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFFFQGSTIS- 117

Query: 74  PTDRFPLHFFPTSPNAPIKTPSRCRRILAASNGLILFAKSEKGPTHHYSVWNPVSNRLTK 133
             +  P+HFFP+S N      +   +++A+SNGL+L  KS + P  +YSVWNP SNRL  
Sbjct: 118 -KNGVPIHFFPSSLNI---LNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNPTSNRLIP 177

Query: 134 IPTTKNCSFTSKIAFHSHDSVSFLIIRFGHFGNCEVDIFSSEKGRWGSLLFFNSPLDSTF 193
           IP  +N     KI FHSHDSVSF I+RFG+ G   ++IFSSE G W  L  FN  +DS F
Sbjct: 178 IPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLA-FNLAMDSLF 237

Query: 194 QLFSCPPAAVLKGVFYWLQSEWNVYALDLLNNQVYYLACPPEETEYRRAVFFRCLAVAGG 253
             F  P A VL GVFYWL+    +YA DLL N+   +  P EE EYRR VF RCLAVAGG
Sbjct: 238 LPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGG 297

Query: 254 SVVMASTDGKFIEIWVLQEWTRS-WDFKCRLSVETLAINNANILYASFEAAAAEAMTGGG 313
            VVMAST+G+ IEIW+LQ+   S W  K RL+VE+L    AN L A    AA       G
Sbjct: 298 EVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAV------G 357

Query: 314 WNFLGIVGFHPWDSERIYLNTTEMVVCCDVGSGKVEIVHRFDRDLKLTDVTDFTFIPYQ 372
              +GIVGF  WDSERIYLNTTE+VVCCD+GSGKVEIVHRFD  L  TDV+DF F+PY+
Sbjct: 358 RRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE 404

[Close]

BLAST of Tan0017011.1 vs. NCBI nr
Match: XP_022996333.1 (F-box protein At1g52495-like [Cucurbita maxima])

HSP 1 Score: 355.1 bits (910), Expect = 7.2e-94
Identity = 194/359 (54.04%), Postives = 233/359 (64.90%), Query Frame = 0


Query: 14  LPEEIIIEVLQRSSLTSLATVSCVSKLWHTLISTKTLIFGTPFSPPLQHGFLFQLRQFSH 73
           LPE+IIIE+L+  SL SLA  +CVSKLW T IST  L+     S PL HGF FQ    S 
Sbjct: 58  LPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFFFQGSTIS- 117

Query: 74  PTDRFPLHFFPTSPNAPIKTPSRCRRILAASNGLILFAKSEKGPTHHYSVWNPVSNRLTK 133
             +  P+HFFP+S N      +   +++++SNGL+L  KS + P  +YSVWNP SNRL  
Sbjct: 118 -KNGVPIHFFPSSLNI---LNTHFYKLISSSNGLLLCGKSNQNPIVNYSVWNPASNRLIP 177

Query: 134 IPTTKNCSFTSKIAFHSHDSVSFLIIRFGHFGNCEVDIFSSEKGRWGSLLFFNSPLDSTF 193
           IP  +N     KI FHSHDSVSF I+RFG+ G   ++IFSSE G W  L  FN  +DS F
Sbjct: 178 IPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLA-FNLAIDSLF 237

Query: 194 QLFSCPPAAVLKGVFYWLQSEWNVYALDLLNNQVYYLACPPEETEYRRAVFFRCLAVAGG 253
             F  P A VL GVFYWL+    +YA DLL N+   +  P EE EYRR VF RCLAVAGG
Sbjct: 238 LPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGG 297

Query: 254 SVVMASTDGKFIEIWVLQEWTRS-WDFKCRLSVETLAINNANILYASFEAAAAEAMTGGG 313
            VVMAST+G+ IEIW+LQ+   S W  K RL+VE+L    AN L A    AA       G
Sbjct: 298 EVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAV------G 357

Query: 314 WNFLGIVGFHPWDSERIYLNTTEMVVCCDVGSGKVEIVHRFDRDLKLTDVTDFTFIPYQ 372
              +GIVGF  WDSERIYLNTTE+VVCCD+GS KVEIVHRFD  L  TDV+DF F+PY+
Sbjct: 358 RRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSAKVEIVHRFDESLGCTDVSDFMFLPYE 404

[Close]

BLAST of Tan0017011.1 vs. NCBI nr
Match: KGN58298.1 (hypothetical protein Csa_017498 [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 3.8e-87
Identity = 185/360 (51.39%), Postives = 232/360 (64.44%), Query Frame = 0


Query: 9   MKNNCLPEEIIIEVLQRSSLTSLATVSCVSKLWHTLISTKTLIFGTPFSPPLQHGFLFQL 68
           M    +P++I IE+LQ  SL SLA  + VSKLW + I TK+L   TP SPP+ HGF F  
Sbjct: 1   MAARLIPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFF-- 60

Query: 69  RQFSH-PTDRFPLHFFPTSPNAPIKTPSRCRRILAASNGLILFAKSEKGPTHHYSVWNPV 128
            Q SH P +  P+HFFP+SP +  KT     R+LA+SNGL+L +K  + P  HYSV+NP 
Sbjct: 61  -QSSHIPKNGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPS 120

Query: 129 SNRLTKIPTTKNCSFTSKIAFHSHDSVSFLIIRFGHFGNCEVDIFSSEKGRWGSLLFFNS 188
           + +L  IP   N   + KI FHSHDSVSF I+RF +FG   ++IF+SE G W  L F+  
Sbjct: 121 TTQLIPIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFY-L 180

Query: 189 PLDSTFQLFSCPPAAVLKGVFYWLQSEWNVYALDLLNNQVYYLACPPEETEYRRAVFFRC 248
            +D+ F  F  P A VL GVFYWL+    +YA DLL N+ Y +  P EETEY R V  RC
Sbjct: 181 DMDTMFFPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRC 240

Query: 249 LAVAGGSVVMASTDGKFIEIWVLQEWTRSWDFKCRLSVETLAINNANILYASFEAAAAEA 308
           LA+AGG +VMASTDGK +EI VL+E    W  KCRL VE++   N N L    EAA +E 
Sbjct: 241 LAIAGGRLVMASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRL---CEAAESER 300

Query: 309 MTGGGWNFLGIVGFHPWDSERIYLNTTEMVVCCDVGSGKVEIVHRFDRDLKLTDVTDFTF 368
           +       +GIVGF   DSERIY+NTTE V+CC VGSGKVEIV+RFD  L+  DV+ FTF
Sbjct: 301 L-------VGIVGFQGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTF 346

[Close]

BLAST of Tan0017011.1 vs. ExPASy TrEMBL
Match: A0A6J1EX93 (F-box protein At1g52495-like OS=Cucurbita moschata OX=3662 GN=LOC111437357 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 3.1e-95
Identity = 196/359 (54.60%), Postives = 234/359 (65.18%), Query Frame = 0


Query: 14  LPEEIIIEVLQRSSLTSLATVSCVSKLWHTLISTKTLIFGTPFSPPLQHGFLFQLRQFSH 73
           LPE+IIIE+L+  SL SLA  +CVSKLW T IST  L+     S PL HGF FQ    S 
Sbjct: 58  LPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFFFQGSTIS- 117

Query: 74  PTDRFPLHFFPTSPNAPIKTPSRCRRILAASNGLILFAKSEKGPTHHYSVWNPVSNRLTK 133
             +  P+HFFP+S N      +   +++A+SNGL+L  KS + P  +YSVWNP SNRL  
Sbjct: 118 -KNGVPIHFFPSSLNI---LNTHFYKLIASSNGLLLCGKSNQNPIVNYSVWNPTSNRLIP 177

Query: 134 IPTTKNCSFTSKIAFHSHDSVSFLIIRFGHFGNCEVDIFSSEKGRWGSLLFFNSPLDSTF 193
           IP  +N     KI FHSHDSVSF I+RFG+ G   ++IFSSE G W  L  FN  +DS F
Sbjct: 178 IPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLA-FNLAMDSLF 237

Query: 194 QLFSCPPAAVLKGVFYWLQSEWNVYALDLLNNQVYYLACPPEETEYRRAVFFRCLAVAGG 253
             F  P A VL GVFYWL+    +YA DLL N+   +  P EE EYRR VF RCLAVAGG
Sbjct: 238 LPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGG 297

Query: 254 SVVMASTDGKFIEIWVLQEWTRS-WDFKCRLSVETLAINNANILYASFEAAAAEAMTGGG 313
            VVMAST+G+ IEIW+LQ+   S W  K RL+VE+L    AN L A    AA       G
Sbjct: 298 EVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAV------G 357

Query: 314 WNFLGIVGFHPWDSERIYLNTTEMVVCCDVGSGKVEIVHRFDRDLKLTDVTDFTFIPYQ 372
              +GIVGF  WDSERIYLNTTE+VVCCD+GSGKVEIVHRFD  L  TDV+DF F+PY+
Sbjct: 358 RRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSGKVEIVHRFDESLGCTDVSDFMFLPYE 404

[Close]

BLAST of Tan0017011.1 vs. ExPASy TrEMBL
Match: A0A6J1KAH8 (F-box protein At1g52495-like OS=Cucurbita maxima OX=3661 GN=LOC111491595 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 3.5e-94
Identity = 194/359 (54.04%), Postives = 233/359 (64.90%), Query Frame = 0


Query: 14  LPEEIIIEVLQRSSLTSLATVSCVSKLWHTLISTKTLIFGTPFSPPLQHGFLFQLRQFSH 73
           LPE+IIIE+L+  SL SLA  +CVSKLW T IST  L+     S PL HGF FQ    S 
Sbjct: 58  LPEDIIIEILRHFSLRSLAKANCVSKLWQTHISTIPLLLHAAISSPLHHGFFFQGSTIS- 117

Query: 74  PTDRFPLHFFPTSPNAPIKTPSRCRRILAASNGLILFAKSEKGPTHHYSVWNPVSNRLTK 133
             +  P+HFFP+S N      +   +++++SNGL+L  KS + P  +YSVWNP SNRL  
Sbjct: 118 -KNGVPIHFFPSSLNI---LNTHFYKLISSSNGLLLCGKSNQNPIVNYSVWNPASNRLIP 177

Query: 134 IPTTKNCSFTSKIAFHSHDSVSFLIIRFGHFGNCEVDIFSSEKGRWGSLLFFNSPLDSTF 193
           IP  +N     KI FHSHDSVSF I+RFG+ G   ++IFSSE G W  L  FN  +DS F
Sbjct: 178 IPKPRNLFTGVKIGFHSHDSVSFTILRFGNLGLEPMEIFSSETGEWRHLA-FNLAIDSLF 237

Query: 194 QLFSCPPAAVLKGVFYWLQSEWNVYALDLLNNQVYYLACPPEETEYRRAVFFRCLAVAGG 253
             F  P A VL GVFYWL+    +YA DLL N+   +  P EE EYRR VF RCLAVAGG
Sbjct: 238 LPFEGPSAVVLNGVFYWLEFRSMIYAFDLLKNEFLKVGFPFEEPEYRREVFSRCLAVAGG 297

Query: 254 SVVMASTDGKFIEIWVLQEWTRS-WDFKCRLSVETLAINNANILYASFEAAAAEAMTGGG 313
            VVMAST+G+ IEIW+LQ+   S W  K RL+VE+L    AN L A    AA       G
Sbjct: 298 EVVMASTNGEVIEIWILQDKASSLWGLKSRLNVESLVGIIANTLCARAATAAV------G 357

Query: 314 WNFLGIVGFHPWDSERIYLNTTEMVVCCDVGSGKVEIVHRFDRDLKLTDVTDFTFIPYQ 372
              +GIVGF  WDSERIYLNTTE+VVCCD+GS KVEIVHRFD  L  TDV+DF F+PY+
Sbjct: 358 RRIVGIVGFQAWDSERIYLNTTEVVVCCDIGSAKVEIVHRFDESLGCTDVSDFMFLPYE 404

[Close]

BLAST of Tan0017011.1 vs. ExPASy TrEMBL
Match: A0A0A0L8X4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G609260 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.8e-87
Identity = 185/360 (51.39%), Postives = 232/360 (64.44%), Query Frame = 0


Query: 9   MKNNCLPEEIIIEVLQRSSLTSLATVSCVSKLWHTLISTKTLIFGTPFSPPLQHGFLFQL 68
           M    +P++I IE+LQ  SL SLA  + VSKLW + I TK+L   TP SPP+ HGF F  
Sbjct: 1   MAARLIPDDITIEILQYFSLRSLAIANSVSKLWQSFIFTKSLHLHTPLSPPICHGFFF-- 60

Query: 69  RQFSH-PTDRFPLHFFPTSPNAPIKTPSRCRRILAASNGLILFAKSEKGPTHHYSVWNPV 128
            Q SH P +  P+HFFP+SP +  KT     R+LA+SNGL+L +K  + P  HYSV+NP 
Sbjct: 61  -QSSHIPKNGAPIHFFPSSPTSLTKTNFPNLRLLASSNGLLLCSKPNQNPIIHYSVFNPS 120

Query: 129 SNRLTKIPTTKNCSFTSKIAFHSHDSVSFLIIRFGHFGNCEVDIFSSEKGRWGSLLFFNS 188
           + +L  IP   N   + KI FHSHDSVSF I+RF +FG   ++IF+SE G W  L F+  
Sbjct: 121 TTQLIPIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEWRRLDFY-L 180

Query: 189 PLDSTFQLFSCPPAAVLKGVFYWLQSEWNVYALDLLNNQVYYLACPPEETEYRRAVFFRC 248
            +D+ F  F  P A VL GVFYWL+    +YA DLL N+ Y +  P EETEY R V  RC
Sbjct: 181 DMDTMFFPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPSEETEYERNVLLRC 240

Query: 249 LAVAGGSVVMASTDGKFIEIWVLQEWTRSWDFKCRLSVETLAINNANILYASFEAAAAEA 308
           LA+AGG +VMASTDGK +EI VL+E    W  KCRL VE++   N N L    EAA +E 
Sbjct: 241 LAIAGGRLVMASTDGKVVEIRVLEERDCLWGLKCRLRVESVVGINGNRL---CEAAESER 300

Query: 309 MTGGGWNFLGIVGFHPWDSERIYLNTTEMVVCCDVGSGKVEIVHRFDRDLKLTDVTDFTF 368
           +       +GIVGF   DSERIY+NTTE V+CC VGSGKVEIV+RFD  L+  DV+ FTF
Sbjct: 301 L-------VGIVGFQGRDSERIYMNTTEFVICCHVGSGKVEIVYRFDTVLESKDVSSFTF 346

[Close]

BLAST of Tan0017011.1 vs. ExPASy TrEMBL
Match: A0A5A7T3C1 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001460 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 7.3e-84
Identity = 178/371 (47.98%), Postives = 233/371 (62.80%), Query Frame = 0


Query: 1   MAEKNEKKMKNNCLPEEIIIEVLQRSSLTSLATVSCVSKLWHTLISTKTLIFGTPFSPPL 60
           MAE++  +     +P +I IE+LQ  SL SLA  + VSKLW + + TK+L   TP SPP+
Sbjct: 12  MAEEHNSRF----IPHDITIEILQHFSLRSLAIANSVSKLWQSFVFTKSLHLHTPPSPPI 71

Query: 61  QHGFLFQLRQFSH-PTDRFPLHFFPTSPNAPIKTPSRCRRILAASNGLILFAKSEKGPTH 120
           +HGF F   Q SH P +  P+HFFP+SP +  KT     R+LA+SNGL+L +K  + PT 
Sbjct: 72  RHGFFF---QSSHIPKNGAPIHFFPSSPTSLTKTRFPNLRLLASSNGLLLCSKPNQNPTI 131

Query: 121 HYSVWNPVSNRLTKIPTTKNCSFTSKIAFHSHDSVSFLIIRFGHFGNCEVDIFSSEKGRW 180
           HYSV+NP + +L  IP   N   + KI FHSHDSVSF I+RF +FG   ++IF+SE G W
Sbjct: 132 HYSVFNPSTTQLIPIPKPSNLISSVKIGFHSHDSVSFTILRFVNFGFKPMEIFASETGEW 191

Query: 181 GSLLFFNSPLDSTFQLFSCPPAAVLKGVFYWLQSEWNVYALDLLNNQVYYLACPPEETEY 240
             L  +   +D+ F  F  P A VL GVFYWL+    +YA DLL N+ Y +  P EETEY
Sbjct: 192 RRLDLY-LDMDTIFLPFEGPSAVVLNGVFYWLEFNSFIYAFDLLRNEFYQVGFPYEETEY 251

Query: 241 RRAVFFRCLAVAGGSVVMASTDGKFIEIWVLQEWTRSWDFKCRLSVETLAINNANILYAS 300
            R+V  RCLA+AG  ++MASTDG+ +EI VL++    W  KCRL VE + +         
Sbjct: 252 GRSVLLRCLAIAGRRLMMASTDGEVVEIRVLEDRDCLWGLKCRLRVEDVVV--------- 311

Query: 301 FEAAAAEAMTGGGWNFLGIVGFHPWDSERIYLNTTEMVVCCDVGSGKVEIVHRFDRDLKL 360
                   +       +GIVGF   DSERIYLNTTE V+CCDVGSGKVEIV+RFD  L+ 
Sbjct: 312 -------GINENSRRLVGIVGF---DSERIYLNTTEFVICCDVGSGKVEIVYRFDTILES 355

Query: 361 TDVTDFTFIPY 371
           T +++FTF PY
Sbjct: 372 THLSNFTFFPY 355

[Close]

BLAST of Tan0017011.1 vs. ExPASy TrEMBL
Match: M1CB75 (F-box protein OS=Solanum tuberosum OX=4113 GN=102578743 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.8e-13
Identity = 93/361 (25.76%), Postives = 143/361 (39.61%), Query Frame = 0


Query: 16  EEIIIEVLQRSSLTSLATVSCVSKLWHTLISTKTLIFGTPF----SPPLQHGFLFQLRQF 75
           ++I+I +L R    SLA   CVSK W   I+  +L +          P   GF +Q R  
Sbjct: 18  DDIVINILHRLPSKSLARFKCVSKCWRKYIADSSLSYSCRSRRWRPQPYLIGFFYQARD- 77

Query: 76  SHPTDRFPLHFFPTSPNAPIKTPS----------RCRRILAASNGLILFAKSEKGPTHHY 135
               +R  + FF +S  + +   S          R   I+A+SNG +L  +        Y
Sbjct: 78  --TCERSKIQFFFSSEESSLDIDSSFDQSVSFLGRSAYIVASSNGFLLCNRQRV-----Y 137

Query: 136 SVWNPVSNRLTKIPTTK------NCSFTSKIAFHSHDSVSFLIIRFGHF-GNCEVDIFSS 195
            V+NP + +   +P T+         F  K+   + D +SF I+R+     N  ++ FSS
Sbjct: 138 YVYNPATRQRMALPKTQIGMNDPTIGFICKVDDPNRDVISFTIVRYWIVQSNVTIESFSS 197

Query: 196 EKGRW-GSLLFFNSPLDSTFQLF-SCPPAAVLKGVFYWLQSEWNVYALDLLNNQVYYLAC 255
           E   W    L  N PL   F ++   P A V+ GVF+WL     +   D ++   + L  
Sbjct: 198 ETNAWIVDNLILNVPLRLYFFVYMKSPSAGVVDGVFFWLDQGPQITVYDSVHKSFWALGF 257

Query: 256 PPEETEYRRAVFFRCLAVAGGSVVMASTDGKFIEIWVLQEWTRSWDFKCRLSVETLAINN 315
           P  E       +F  L  +GG    A      I +W L+   RS D    L V     + 
Sbjct: 258 P--EDMVATGNYF--LGFSGGDFYFALYIKTNITVWQLKSNIRSRD---ALWVRKYVTDV 317

Query: 316 ANILYASFEAAAAEAMTGGGWNFLGIVGFHPWDSERIYLNTTEMVVCCDVGSGKVEIVHR 354
           A              +TG     +  +  HP      YL+    V+  D+ +   E+VH 
Sbjct: 318 A--------TTVPFGLTGFLHTEVQNMDIHPAIPHIFYLDVKGKVISYDMETDIAELVHD 355

[Close]

BLAST of Tan0017011.1 vs. TAIR 10
Match: AT3G25460.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 49.3 bits (116), Expect = 7.8e-06
Identity = 64/280 (22.86%), Postives = 106/280 (37.86%), Query Frame = 0


Query: 14  LPEEIIIEVLQRSSLTSLATVSCVSKLWHTLISTKTLIFGTPFSPPLQHGFLFQLRQFSH 73
           LPE++++E+L R   TSL  +    KLW+ L + K          P Q   +   + F  
Sbjct: 6   LPEDLLVEILCRVPATSLKRLRSTCKLWNHLYNDKRFKSKHCHKAPRQ-SLILMWKNFGF 65

Query: 74  PTDRFPLHFFPTSPNAPIKTPSRCRRI-------------LAASNGLILFAKSEKGPTHH 133
            +    L        +PI+       I             L  ++GL+L    EK  T  
Sbjct: 66  SSISINLQRV-----SPIEVTGELNLIDHHSSLGMFRNSPLCQTSGLLLCVNVEKINT-R 125

Query: 134 YSVWNPVSNRLTKIPTTKNCSFTSKIAFHSH-----DSVSFLIIRFGHFGNCEVDIFSSE 193
             VWNP + + TK    +   +    A  S+     D+ S+ I+  G +G  E +I+   
Sbjct: 126 LVVWNPCTGK-TKWIQHRRMGYICNYALGSYQDKKSDNNSYKILSHGIYGGQEFEIYEIN 185

Query: 194 KGRWGSLLFFNSPLDSTFQLFSCPPAAVLKGVFYWLQSEWNVYALDLL------NNQVYY 253
              W  L   +  +DS+  + +      LKG  YW  ++ N    DL         + + 
Sbjct: 186 SNSWRIL---DVTVDSSLYIEN----VSLKGKTYWFATDGNDKPCDLFLICFDYTTERFE 245

Query: 254 LACPPEETEYRRAVFFRCLAVAGGSVVMASTDGKFIEIWV 270
             C P +  Y R      +     SV++  +     +IWV
Sbjct: 246 RLCLPYQIPYFRNTSLSVVKEEKLSVLLQPSLTSKTQIWV 270

[Close]

BLAST of Tan0017011.1 vs. TAIR 10
Match: AT5G62660.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 46.2 bits (108), Expect = 6.6e-05
Identity = 67/301 (22.26%), Postives = 119/301 (39.53%), Query Frame = 0


Query: 14  LPEEIIIEVLQRSSLTSLATVSCVSKLWHTLISTK-----TLIFGTPFSPP------LQH 73
           +P +++IE+L +    SL    CVSKLW +LI ++      L   TP  PP      + H
Sbjct: 41  IPLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYLTVKTPRRPPRLYMSLVDH 100

Query: 74  GFLFQLRQFSHPTDRFPLHFFPTSPNAP--IKTPSRCRRILAASNGLILFAKSEKGPTHH 133
                L    +P +   L    ++ +    +       R +    GLIL+          
Sbjct: 101 LLCNSLMVCHYPCESVLLSSSSSAESLEQNLTIAGMGGRNMVVLRGLILYVVCRTA---- 160

Query: 134 YSVWNPVSNRLTKIPTTKN------CSFTSKIAFHSHDSV--SFLIIRFGHFGNCEVDIF 193
            S++NP + +   +P  K+        + S + F  +D V   + ++       C V +F
Sbjct: 161 -SIYNPTTRQSVTLPAVKSNILAQKSHWNSLLYFFGYDPVLDQYKVV-------CTVALF 220

Query: 194 SSEKGRWGS--LLFFNSPLDSTFQLFSCPP------AAVLKGVFYWLQSEWN----VYAL 253
           S    R  S   +F   P  S  ++    P         + GV Y+L S W     V + 
Sbjct: 221 SKRLKRITSEHWVFVLEPGGSWKRIEFDQPHLPTRLGLCVNGVIYYLASTWKRRDIVVSF 280

Query: 254 DLLNNQVYYLACPPEETEYRRAVFFRCLAVAGGSVVMASTDGK---FIEIWVLQE---WT 276
           D+ + +   +  P + + +  +V F  +   G   V   T  K    +++WVL++   W+
Sbjct: 281 DVRSEEFSMIQGPLKVSAFSESVGF--IEYGGKPAVFDYTMMKQTGLVDLWVLEDAGKWS 327

[Close]

BLAST of Tan0017011.1 vs. TAIR 10
Match: AT5G65850.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 43.5 bits (101), Expect = 4.3e-04
Identity = 45/141 (31.91%), Postives = 65/141 (46.10%), Query Frame = 0


Query: 4   KNEKKMKNNCLPEEIIIEVLQRSSLTSLATVSCVSKLWHTLIS----TKTLIFGTPFSPP 63
           K EK ++   +P +IIIE+L R    S+AT  CVSKLW ++I     T+  +  +   P 
Sbjct: 28  KTEKSVQ---IPVDIIIEILLRLPAKSIATCRCVSKLWISVICRQDFTELFLTRSLHRPQ 87

Query: 64  L-----QHGFLFQLRQFSHPTDRFPLHFFPTSPNAPIKTPSRCRRILAASNGLILFAKSE 123
           L     + G LF    FS P  + P   +  S    +K  S C +I    NGLI F + E
Sbjct: 88  LLFCCKKDGNLF---FFSSPQLQNP---YENSSAISLKNFSLCYKISRPVNGLICFKRKE 147

Query: 124 KGPTHHYSVWNPVSNRLTKIP 136
              T    + NP +     +P
Sbjct: 148 MNETVTV-ICNPSTGHTLSLP 158

The following BLAST results are available for this feature:

BLAST of Tan0017011.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSV6	1.1e-04	22.86	Putative F-box protein At3g25460 OS=Arabidopsis thaliana OX=3702 GN=At3g25460 PE...	[more]
Q9LV12	9.3e-04	22.26	Putative F-box protein At5g62660 OS=Arabidopsis thaliana OX=3702 GN=At5g62660 PE...	[more]

BLAST of Tan0017011.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888571.1	4.5e-96	54.27	putative F-box protein At1g32420 [Benincasa hispida]	[more]
XP_022931048.1	6.5e-95	54.60	F-box protein At1g52495-like [Cucurbita moschata]	[more]
KAG7036294.1	6.5e-95	54.60	hypothetical protein SDJN02_03097, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022996333.1	7.2e-94	54.04	F-box protein At1g52495-like [Cucurbita maxima]	[more]
KGN58298.1	3.8e-87	51.39	hypothetical protein Csa_017498 [Cucumis sativus]	[more]

BLAST of Tan0017011.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EX93	3.1e-95	54.60	F-box protein At1g52495-like OS=Cucurbita moschata OX=3662 GN=LOC111437357 PE=4 ...	[more]
A0A6J1KAH8	3.5e-94	54.04	F-box protein At1g52495-like OS=Cucurbita maxima OX=3661 GN=LOC111491595 PE=4 SV...	[more]
A0A0A0L8X4	1.8e-87	51.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G609260 PE=4 SV=1	[more]
A0A5A7T3C1	7.3e-84	47.98	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001460 ...	[more]
M1CB75	8.8e-13	25.76	F-box protein OS=Solanum tuberosum OX=4113 GN=102578743 PE=4 SV=1	[more]

BLAST of Tan0017011.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25460.1	7.8e-06	22.86	F-box and associated interaction domains-containing protein	[more]
AT5G62660.1	6.6e-05	22.26	F-box and associated interaction domains-containing protein	[more]
AT5G65850.1	4.3e-04	31.91	F-box and associated interaction domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 14..54 e-value: 2.2E-4 score: 30.6
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 12..48 e-value: 2.7E-6 score: 27.1
None	No IPR available	GENE3D	1.20.1280.50		coord: 4..51 e-value: 1.8E-6 score: 29.7
None	No IPR available	PANTHER	PTHR35546:SF30	SUBFAMILY NOT NAMED	coord: 9..354
None	No IPR available	PANTHER	PTHR35546	F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED	coord: 9..354
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 12..84
IPR011043	Galactose oxidase/kelch, beta-propeller	SUPERFAMILY	50965	Galactose oxidase, central domain	coord: 93..277

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0017011	Tan0017011	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0017011.1-exon	Tan0017011.1-exon-LG08:8724799..8725920	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0017011.1-cds	Tan0017011.1-cds-LG08:8724799..8725920	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0017011.1	Tan0017011.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding