Tan0016245.1 (mRNA) Snake gourd v1

Overview


Name	Tan0016245.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	cucumber peeling cupredoxin-like
Location	LG06: 3110823 .. 3112679 (+)
Sequence length	850
RNA-Seq Expression	Tan0016245.1
Synteny	Tan0016245.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCCTTCTCCTTCTCCATCGCCAGTCCCCACTTCCAAAGTCTACGTCCTTCATTAAAACGCATTTACGCGTTCCCACTGACTTAATTATTATTTTTCTATAAATTTGCTTCTCATTCTTCATTAAAACCCAACTCAAGCTCGATCGTCAAAGAGAGATCAGTAAATTAAATTAACCAACTTTTTTAGAGCTAGCTTCTTCCGTTCATTTCAGAGAGATGGCCGCCGGAGTTGGTTTAGTTTTATTTGCGGTGGTTTTTCTTCCACTTGCCGCCGCTCAGACGGTTCATGACGTCGGAGGCTCCGCCGGTTGGTCGGTTCCGCAGAGCACCCCGGCTTTCTATTCCAACTGGGCTGCTGATAAAACCTTCCTCCTTGGCGATTCCCTCAGTAAGATTTTTTTTCTTCTTCTGTTCCTCTTCTTAAATTTACATCATTCTTTTCTTAATTTTGTTCTTTATTTTTTAATCTCTCTCTTTTTTTCTTTTTTTTTTAATTTTACCTTTAAAATGTATTAAAAGAAAATCTTGAGTCATTTCGATAAAAGGAATCCATTGAATTATTATTTTGTTAACGTGTTTGATATTTGGATTTGTCCTTTAGAAGAAATTGCTTTAGTTGATGAGTGGTTTAAATTTTGCTAACAAGAGGATTGGATTTGATGTGTTAAGTTGATTTCTAATCGCTTCGTTTTCTATTTTTAAAAATTAATTTATTCTTGTTTTCTTATAATGTCTTTTCAGAGTCTTTTATGTTCTCTACAATAGTTCAAATCTTTTTTTAAGAATATATTTGAGTTTCTAACTAAATTCTAAAAAACAAAAAAAAGTGTTTGAAAATTATTTTTTTTTTCAAGTTTTTAAAACTTGCCAAGTAGACAATAAAAGTACCTAGCATTTGTAGGCTTAATTTTTAAAAATCGAAAATTAAAATCAAAATAAAAATCAAATCGAGGCTTTAAATGTTCAACAATTTTTTACTACAAACTTCATACTTTTGATGTGGCGTATTTTTATTTGTTTACTTTGGTTGTATTTAATATATGATTGGACTTTTTATTTTATTTTTTTGAGAAAAATATATGATTGGATCCTTGAGTGGTGGGGAGACAAGTAATGTTAACACATATTTAATTAAAAATAATAATGATACAACCACTTCATTTGTTAACAAATTTCGCATAACGTAAACTAATTGGAATAAACTAAATTACGTCATTTGGCATATTAGTCTAAATTTAATGTGAATGGTTTTTCGTAGACTATATATCACAAATGTAAGATACAAATTGAAACATACCACTCTTAAAACAAGCAGAGATATATTAATCATTTAACTATATTGAAGTTATTAGCGACAATAATTTATAACCGAGTTCAAATGTTTTATTTTTATAGGATTTACCTTCCCAGCAAATGCACACGACGTACTTGAACTAGAAACAAAAGAATTGTTCGATGCATGTAGTTTCAACAACAATGACAATGATATTAAGAGAACAAGTCCAGTAGTAGTATCACTCGATGATCCAGGCATGCATTACTTTGTCTGCACCATTGGCCCGCATTGTTCGCTAGGCCAAAAGTTATCCATCAATGTCTCTGCCACTGGAGCTAGCGGTCCGATGTCGCCTTCTTCGCCGCGCCCGCCTTCTTCTTCATTACCGCCCCCATCGCCTTCCTCCTCTAATGCAGTGATGGCAAGCCTTTATGTCACTTTATTGTCCGCCATTGTTATGAGCTTGTTTTAGATATGAGGCTATTGATTTAATTTAGTTTATGTTTATGGAGGTTTGTTGAGAGATTGTGAGTGATTATATTTCATTTGTCTTCCAATAAATTGATAAGTTTTTGTCTTC

mRNA sequence

TCTCCTTCTCCTTCTCCATCGCCAGTCCCCACTTCCAAAGTCTACGTCCTTCATTAAAACGCATTTACGCGTTCCCACTGACTTAATTATTATTTTTCTATAAATTTGCTTCTCATTCTTCATTAAAACCCAACTCAAGCTCGATCGTCAAAGAGAGATCAGTAAATTAAATTAACCAACTTTTTTAGAGCTAGCTTCTTCCGTTCATTTCAGAGAGATGGCCGCCGGAGTTGGTTTAGTTTTATTTGCGGTGGTTTTTCTTCCACTTGCCGCCGCTCAGACGGTTCATGACGTCGGAGGCTCCGCCGGTTGGTCGGTTCCGCAGAGCACCCCGGCTTTCTATTCCAACTGGGCTGCTGATAAAACCTTCCTCCTTGGCGATTCCCTCAGATTTACCTTCCCAGCAAATGCACACGACGTACTTGAACTAGAAACAAAAGAATTGTTCGATGCATGTAGTTTCAACAACAATGACAATGATATTAAGAGAACAAGTCCAGTAGTAGTATCACTCGATGATCCAGGCATGCATTACTTTGTCTGCACCATTGGCCCGCATTGTTCGCTAGGCCAAAAGTTATCCATCAATGTCTCTGCCACTGGAGCTAGCGGTCCGATGTCGCCTTCTTCGCCGCGCCCGCCTTCTTCTTCATTACCGCCCCCATCGCCTTCCTCCTCTAATGCAGTGATGGCAAGCCTTTATGTCACTTTATTGTCCGCCATTGTTATGAGCTTGTTTTAGATATGAGGCTATTGATTTAATTTAGTTTATGTTTATGGAGGTTTGTTGAGAGATTGTGAGTGATTATATTTCATTTGTCTTCCAATAAATTGATAAGTTTTTGTCTTC

Coding sequence (CDS)

ATGGCCGCCGGAGTTGGTTTAGTTTTATTTGCGGTGGTTTTTCTTCCACTTGCCGCCGCTCAGACGGTTCATGACGTCGGAGGCTCCGCCGGTTGGTCGGTTCCGCAGAGCACCCCGGCTTTCTATTCCAACTGGGCTGCTGATAAAACCTTCCTCCTTGGCGATTCCCTCAGATTTACCTTCCCAGCAAATGCACACGACGTACTTGAACTAGAAACAAAAGAATTGTTCGATGCATGTAGTTTCAACAACAATGACAATGATATTAAGAGAACAAGTCCAGTAGTAGTATCACTCGATGATCCAGGCATGCATTACTTTGTCTGCACCATTGGCCCGCATTGTTCGCTAGGCCAAAAGTTATCCATCAATGTCTCTGCCACTGGAGCTAGCGGTCCGATGTCGCCTTCTTCGCCGCGCCCGCCTTCTTCTTCATTACCGCCCCCATCGCCTTCCTCCTCTAATGCAGTGATGGCAAGCCTTTATGTCACTTTATTGTCCGCCATTGTTATGAGCTTGTTTTAG

Protein sequence

MAAGVGLVLFAVVFLPLAAAQTVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFTFPANAHDVLELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQKLSINVSATGASGPMSPSSPRPPSSSLPPPSPSSSNAVMASLYVTLLSAIVMSLF

Homology

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BLAST of Tan0016245.1 vs. ExPASy Swiss-Prot
Match: P29602 (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3)

HSP 1 Score: 172.6 bits (436), Expect = 4.0e-42
Identity = 85/128 (66.41%), Postives = 101/128 (78.91%), Query Frame = 0


Query: 22  TVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFTFPANAHDVLELETKELFDACS 81
           TVH VG + GWSVP S+P FYS WAA KTF +GDSL+F FPANAH+V E+ETK+ FDAC+
Sbjct: 3   TVHIVGDNTGWSVP-SSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACN 62

Query: 82  FNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQKLSINVSATGASGPMSPSSPRP 141
           F N+DND++RTSPV+  LD+ GMHYFVCT+G HCS GQKLSINV A  A+  M P S  P
Sbjct: 63  FVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSMPPPSSSP 122

Query: 142 PSSSLPPP 150
           PSS +PPP
Sbjct: 123 PSSVMPPP 129

[Close]

BLAST of Tan0016245.1 vs. ExPASy Swiss-Prot
Match: P42849 (Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-19
Identity = 54/116 (46.55%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 24  HDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFTFPANAHDVLELETKELFDACSFN 83
           +DVGG   W  P S P FY  WA  KTF +GD L F F A  HDV  + TK+ FD C   
Sbjct: 3   YDVGGDMEWKRP-SDPKFYITWATGKTFRVGDELEFDFAAGMHDV-AVVTKDAFDNCKKE 62

Query: 84  NNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQKLSIN-VSATGASGPMSPSS 139
           N  + +  T PV + L+  G  Y++CT+G HC +GQKLSIN V A GA G  +P +
Sbjct: 63  NPISHM-TTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGGAGGGATPGA 115

[Close]

BLAST of Tan0016245.1 vs. ExPASy Swiss-Prot
Match: Q07488 (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-16
Identity = 56/146 (38.36%), Postives = 74/146 (50.68%), Query Frame = 0


Query: 8   VLFAVVFLPLAAAQTV-----HDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFTFP 67
           V   V FL L  A  V     +DVG    W+ P   P FY+ WA  KTF +GD L F F 
Sbjct: 4   VFKTVTFLVLVFAAVVVFAEDYDVGDDTEWTRPMD-PEFYTTWATGKTFRVGDELEFDFA 63

Query: 68  ANAHDVLELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQKLS 127
           A  HDV  + ++  F+ C      + +    PV + L+  G  YF+CT+G HC  GQKLS
Sbjct: 64  AGRHDV-AVVSEAAFENCEKEKPISHM-TVPPVKIMLNTTGPQYFICTVGDHCRFGQKLS 123

Query: 128 INVSATGASGPMSPSSPRPPSSSLPP 149
           I V A GA+G  +P +   P+    P
Sbjct: 124 ITVVAAGATGGATPGAGATPAPGSTP 146

[Close]

BLAST of Tan0016245.1 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.2e-15
Identity = 58/159 (36.48%), Postives = 83/159 (52.20%), Query Frame = 0


Query: 1   MAAGVGLVLFAVVFLPL--AAAQTVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLR 60
           MA+   L++ +V+   L      T H +GG +GW+V  S       WAA +TF +GD+L 
Sbjct: 1   MASREMLIIISVLATTLIGLTVATDHTIGGPSGWTVGAS----LRTWAAGQTFAVGDNLV 60

Query: 61  FTFPANAHDVLELETKELFDAC-------SFNNNDNDIKRTSPVVVSLDDPGMHYFVCTI 120
           F++PA  HDV+E+ TK  FD+C       +F N ++        +V L  PG  YF+C +
Sbjct: 61  FSYPAAFHDVVEV-TKPEFDSCQAVKPLITFANGNS--------LVPLTTPGKRYFICGM 120

Query: 121 GPHCSLGQKLSINVSATGASGPMSPSSPRPPSSSLPPPS 151
             HCS G KL +NV  T    P +P     PS + P PS
Sbjct: 121 PGHCSQGMKLEVNVVPTATVAPTAPLPNTVPSLNAPSPS 146

[Close]

BLAST of Tan0016245.1 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.1e-14
Identity = 61/177 (34.46%), Postives = 87/177 (49.15%), Query Frame = 0


Query: 9   LFAVVFLPLAAAQTVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFTFPANAHDV 68
           L A++ + L +  TV+ VG ++GW +       YS WA+DKTF +GDSL F + A AH V
Sbjct: 12  LLAIINMALPSLATVYTVGDTSGWVIGGD----YSTWASDKTFAVGDSLVFNYGAGAHTV 71

Query: 69  LELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQKLSINVSAT 128
            E++  +     S N+   D   T    + L   G HYF+C +  H + G KLSI V A+
Sbjct: 72  DEVKESDYKSCTSGNSISTD--STGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKAS 131

Query: 129 -----------GASGPMSPSSPRPPSSSLPPPSPSSSNAVMASLYVTLLSAIVMSLF 175
                       +SG  SPSS   P+++    +P+  N   A    T LS IV   F
Sbjct: 132 SGSSAAPSATPSSSGKGSPSSDDTPAATTTTTTPTKQNESSA----TSLSPIVALFF 178

[Close]

BLAST of Tan0016245.1 vs. NCBI nr
Match: XP_008461124.1 (PREDICTED: cucumber peeling cupredoxin-like [Cucumis melo] >TYK10543.1 cucumber peeling cupredoxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 211.5 bits (537), Expect = 6.0e-51
Identity = 116/180 (64.44%), Postives = 137/180 (76.11%), Query Frame = 0


Query: 3   AGVGLV--LFAVVFLPLAAAQTVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFT 62
           AGV  V  L AVVF+  A AQTVH VG S GW+VP S P FYS WAA KTF LG+S++F 
Sbjct: 4   AGVAFVLGLIAVVFIHPATAQTVHIVGDSTGWTVPPS-PTFYSEWAAGKTFRLGESIQFN 63

Query: 63  FPANAHDVLELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQK 122
           FP NAHDVLE++TKE FDAC+F N+DNDI+RT PV+  LD+ GMHYFVCT+G HCS GQK
Sbjct: 64  FPTNAHDVLEMKTKESFDACNFTNSDNDIERTGPVIERLDELGMHYFVCTVGTHCSSGQK 123

Query: 123 LSIN-VSATGA-----SGPMSPSSPRPPSSSLPPPSPSSSNAVMASLYVTLLSAIVMSLF 175
           L+IN VSAT        GPMSPSSP PPSS +PPPSPSSSNA+MA+L +T  + +VM+ F
Sbjct: 124 LAINVVSATAGGPMSPGGPMSPSSPSPPSSVMPPPSPSSSNALMATLPLTFFALLVMTFF 182

[Close]

BLAST of Tan0016245.1 vs. NCBI nr
Match: XP_038896386.1 (cucumber peeling cupredoxin-like [Benincasa hispida])

HSP 1 Score: 208.0 bits (528), Expect = 6.6e-50
Identity = 114/177 (64.41%), Postives = 138/177 (77.97%), Query Frame = 0


Query: 1   MAAGVGLV--LFAVVFLPLAAAQTVHDVGGSAGWSVPQS-TPAFYSNWAADKTFLLGDSL 60
           MAAGVG V  L A+VFL  A AQTVHDVGG+ GW+VP S  PAFYS+WAA+K F +GDSL
Sbjct: 1   MAAGVGFVLGLVALVFLHHATAQTVHDVGGTTGWTVPPSGGPAFYSDWAANKIFRVGDSL 60

Query: 61  RFTFPANAHDVLELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSL 120
           RF F  N HDV E+ +KE FD+C+FN  D+DI R  P  V+L+D  MHYFVCT+GPHCSL
Sbjct: 61  RFNFQTNNHDVFEV-SKESFDSCTFNPTDDDIIRAGPATVTLNDTEMHYFVCTVGPHCSL 120

Query: 121 GQKLSINVSATGASGPMSPSSPRPPSSSLPPPSPSSSNAVMASLYVTLLSAIVMSLF 175
           GQKLSINV +  A GP+SPSSP PPS+ LPPPSPSSSN++ A+LY++  SAI+M+ F
Sbjct: 121 GQKLSINVVSAAAGGPISPSSPAPPSTVLPPPSPSSSNSLSATLYLS-FSAILMTFF 175

[Close]

BLAST of Tan0016245.1 vs. NCBI nr
Match: KAA0058749.1 (cucumber peeling cupredoxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 199.9 bits (507), Expect = 1.8e-47
Identity = 104/159 (65.41%), Postives = 124/159 (77.99%), Query Frame = 0


Query: 22  TVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFTFPANAHDVLELETKELFDACS 81
           TVH VG S GW+VP S P FYS WAA KTF LG+S++F FP NAHDVLE++TKE FDAC+
Sbjct: 322 TVHIVGDSTGWTVPPS-PTFYSEWAAGKTFRLGESIQFNFPTNAHDVLEMKTKESFDACN 381

Query: 82  FNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQKLSIN-VSATGA-----SGPMS 141
           F N+DNDI+RT PV+  LD+ GMHYFVCT+G HCS GQKL+IN VSAT        GPMS
Sbjct: 382 FTNSDNDIERTGPVIERLDELGMHYFVCTVGTHCSSGQKLAINVVSATAGGPMSPGGPMS 441

Query: 142 PSSPRPPSSSLPPPSPSSSNAVMASLYVTLLSAIVMSLF 175
           PSSP PPSS +PPPSPSSSNA+MA+L +T  + +VM+ F
Sbjct: 442 PSSPSPPSSVMPPPSPSSSNALMATLPLTFFALLVMTFF 479

[Close]

BLAST of Tan0016245.1 vs. NCBI nr
Match: NP_001267496.1 (cucumber peeling cupredoxin-like precursor [Cucumis sativus] >AAC32421.1 stellacyanin [Cucumis sativus] >KGN45265.1 hypothetical protein Csa_016611 [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 2.3e-47
Identity = 114/183 (62.30%), Postives = 136/183 (74.32%), Query Frame = 0


Query: 1   MAAG---VGLVLFAVVFL-PLAAAQTVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDS 60
           MAAG     L L AVVFL P  A  TVH VG + GWSVP S+P FYS WAA KTF +GDS
Sbjct: 1   MAAGSVAFVLGLIAVVFLHPATAQSTVHIVGDNTGWSVP-SSPNFYSQWAAGKTFRVGDS 60

Query: 61  LRFTFPANAHDVLELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCS 120
           L+F FPANAH+V E+ETK+ FDAC+F N+DND++RTSPV+  LD+ GMHYFVCT+G HCS
Sbjct: 61  LQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCS 120

Query: 121 LGQKLSINVSATGASGPMSPSSPRPPSSS-----LPPPSPSSSNAVMASLYVTLLSAIVM 175
            GQKLSINV A  A+  M P S  PPSSS     +PPPSPSSSNA+MA+LY+T  + +VM
Sbjct: 121 NGQKLSINVVAANATVSMPPPSSSPPSSSPPSSVMPPPSPSSSNALMATLYLTFSALLVM 180

[Close]

BLAST of Tan0016245.1 vs. NCBI nr
Match: XP_023547709.1 (cucumber peeling cupredoxin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195.3 bits (495), Expect = 4.4e-46
Identity = 102/166 (61.45%), Postives = 122/166 (73.49%), Query Frame = 0


Query: 9   LFAVVFLPLAAAQTVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFTFPANAHDV 68
           L AV+FL  A AQT HDVGGS GW+VP S  AFYS+WAA  TF +GDSLRF F   +H V
Sbjct: 15  LLAVLFLQHATAQTTHDVGGSTGWTVPPSGAAFYSDWAAKNTFSVGDSLRFAFTTGSHSV 74

Query: 69  LELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQKLSINVSAT 128
           L++ +KE F+ C F N D DI  T PV V+L+  GMHYF+CTIG HCSLGQK++INV AT
Sbjct: 75  LKVSSKESFEGCKFENGDRDIMTTGPVTVALNSTGMHYFICTIGTHCSLGQKVAINVGAT 134

Query: 129 GASGPMSPSSPRPPSSSLPPPSPSSSNAVMASLYVTLLSAIVMSLF 175
            A GPMSP     P+S  PPPSPSS+NAV A+LY+T  SA+VM+LF
Sbjct: 135 AAGGPMSPP---VPASQSPPPSPSSANAVTATLYLT-FSAVVMALF 176

[Close]

BLAST of Tan0016245.1 vs. ExPASy TrEMBL
Match: A0A5D3CF84 (Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001960 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.9e-51
Identity = 116/180 (64.44%), Postives = 137/180 (76.11%), Query Frame = 0


Query: 3   AGVGLV--LFAVVFLPLAAAQTVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFT 62
           AGV  V  L AVVF+  A AQTVH VG S GW+VP S P FYS WAA KTF LG+S++F 
Sbjct: 4   AGVAFVLGLIAVVFIHPATAQTVHIVGDSTGWTVPPS-PTFYSEWAAGKTFRLGESIQFN 63

Query: 63  FPANAHDVLELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQK 122
           FP NAHDVLE++TKE FDAC+F N+DNDI+RT PV+  LD+ GMHYFVCT+G HCS GQK
Sbjct: 64  FPTNAHDVLEMKTKESFDACNFTNSDNDIERTGPVIERLDELGMHYFVCTVGTHCSSGQK 123

Query: 123 LSIN-VSATGA-----SGPMSPSSPRPPSSSLPPPSPSSSNAVMASLYVTLLSAIVMSLF 175
           L+IN VSAT        GPMSPSSP PPSS +PPPSPSSSNA+MA+L +T  + +VM+ F
Sbjct: 124 LAINVVSATAGGPMSPGGPMSPSSPSPPSSVMPPPSPSSSNALMATLPLTFFALLVMTFF 182

[Close]

BLAST of Tan0016245.1 vs. ExPASy TrEMBL
Match: A0A1S3CDJ1 (cucumber peeling cupredoxin-like OS=Cucumis melo OX=3656 GN=LOC103499805 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.9e-51
Identity = 116/180 (64.44%), Postives = 137/180 (76.11%), Query Frame = 0


Query: 3   AGVGLV--LFAVVFLPLAAAQTVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFT 62
           AGV  V  L AVVF+  A AQTVH VG S GW+VP S P FYS WAA KTF LG+S++F 
Sbjct: 4   AGVAFVLGLIAVVFIHPATAQTVHIVGDSTGWTVPPS-PTFYSEWAAGKTFRLGESIQFN 63

Query: 63  FPANAHDVLELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQK 122
           FP NAHDVLE++TKE FDAC+F N+DNDI+RT PV+  LD+ GMHYFVCT+G HCS GQK
Sbjct: 64  FPTNAHDVLEMKTKESFDACNFTNSDNDIERTGPVIERLDELGMHYFVCTVGTHCSSGQK 123

Query: 123 LSIN-VSATGA-----SGPMSPSSPRPPSSSLPPPSPSSSNAVMASLYVTLLSAIVMSLF 175
           L+IN VSAT        GPMSPSSP PPSS +PPPSPSSSNA+MA+L +T  + +VM+ F
Sbjct: 124 LAINVVSATAGGPMSPGGPMSPSSPSPPSSVMPPPSPSSSNALMATLPLTFFALLVMTFF 182

[Close]

BLAST of Tan0016245.1 vs. ExPASy TrEMBL
Match: A0A5A7UZ00 (Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002210 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 8.7e-48
Identity = 104/159 (65.41%), Postives = 124/159 (77.99%), Query Frame = 0


Query: 22  TVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFTFPANAHDVLELETKELFDACS 81
           TVH VG S GW+VP S P FYS WAA KTF LG+S++F FP NAHDVLE++TKE FDAC+
Sbjct: 322 TVHIVGDSTGWTVPPS-PTFYSEWAAGKTFRLGESIQFNFPTNAHDVLEMKTKESFDACN 381

Query: 82  FNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQKLSIN-VSATGA-----SGPMS 141
           F N+DNDI+RT PV+  LD+ GMHYFVCT+G HCS GQKL+IN VSAT        GPMS
Sbjct: 382 FTNSDNDIERTGPVIERLDELGMHYFVCTVGTHCSSGQKLAINVVSATAGGPMSPGGPMS 441

Query: 142 PSSPRPPSSSLPPPSPSSSNAVMASLYVTLLSAIVMSLF 175
           PSSP PPSS +PPPSPSSSNA+MA+L +T  + +VM+ F
Sbjct: 442 PSSPSPPSSVMPPPSPSSSNALMATLPLTFFALLVMTFF 479

[Close]

BLAST of Tan0016245.1 vs. ExPASy TrEMBL
Match: Q96403 (Stellacyanin OS=Cucumis sativus OX=3659 GN=Csa_7G432470 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.1e-47
Identity = 114/183 (62.30%), Postives = 136/183 (74.32%), Query Frame = 0


Query: 1   MAAG---VGLVLFAVVFL-PLAAAQTVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDS 60
           MAAG     L L AVVFL P  A  TVH VG + GWSVP S+P FYS WAA KTF +GDS
Sbjct: 1   MAAGSVAFVLGLIAVVFLHPATAQSTVHIVGDNTGWSVP-SSPNFYSQWAAGKTFRVGDS 60

Query: 61  LRFTFPANAHDVLELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCS 120
           L+F FPANAH+V E+ETK+ FDAC+F N+DND++RTSPV+  LD+ GMHYFVCT+G HCS
Sbjct: 61  LQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCS 120

Query: 121 LGQKLSINVSATGASGPMSPSSPRPPSSS-----LPPPSPSSSNAVMASLYVTLLSAIVM 175
            GQKLSINV A  A+  M P S  PPSSS     +PPPSPSSSNA+MA+LY+T  + +VM
Sbjct: 121 NGQKLSINVVAANATVSMPPPSSSPPSSSPPSSVMPPPSPSSSNALMATLYLTFSALLVM 180

[Close]

BLAST of Tan0016245.1 vs. ExPASy TrEMBL
Match: A0A6J1GPD3 (cucumber peeling cupredoxin-like OS=Cucurbita moschata OX=3662 GN=LOC111456235 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.8e-45
Identity = 102/166 (61.45%), Postives = 122/166 (73.49%), Query Frame = 0


Query: 9   LFAVVFLPLAAAQTVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFTFPANAHDV 68
           L AV+ L  A AQT HDVGGS GW+VP    AFYS+WAA KTF +GDSLRF F   +H V
Sbjct: 14  LLAVLLLQHATAQTTHDVGGSTGWTVPTGGAAFYSDWAAGKTFSVGDSLRFAFATGSHSV 73

Query: 69  LELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQKLSINVSAT 128
           L++ +KE F+ C F N D+DI  T P  V+L+  GMHYF+CTIG HCSLGQK++INV AT
Sbjct: 74  LKVSSKESFEGCRFENGDSDIMTTGPATVALNSTGMHYFICTIGTHCSLGQKVAINVGAT 133

Query: 129 GASGPMSPSSPRPPSSSLPPPSPSSSNAVMASLYVTLLSAIVMSLF 175
            A GPMSP  P P S S PPPSPSS+NAV A+LY+T  SA+VM+LF
Sbjct: 134 AAGGPMSP--PMPASQS-PPPSPSSANAVTATLYLT-FSAVVMALF 175

[Close]

BLAST of Tan0016245.1 vs. TAIR 10
Match: AT5G20230.1 (blue-copper-binding protein )

HSP 1 Score: 87.8 bits (216), Expect = 9.3e-18
Identity = 56/146 (38.36%), Postives = 74/146 (50.68%), Query Frame = 0


Query: 8   VLFAVVFLPLAAAQTV-----HDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFTFP 67
           V   V FL L  A  V     +DVG    W+ P   P FY+ WA  KTF +GD L F F 
Sbjct: 4   VFKTVTFLVLVFAAVVVFAEDYDVGDDTEWTRPMD-PEFYTTWATGKTFRVGDELEFDFA 63

Query: 68  ANAHDVLELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQKLS 127
           A  HDV  + ++  F+ C      + +    PV + L+  G  YF+CT+G HC  GQKLS
Sbjct: 64  AGRHDV-AVVSEAAFENCEKEKPISHM-TVPPVKIMLNTTGPQYFICTVGDHCRFGQKLS 123

Query: 128 INVSATGASGPMSPSSPRPPSSSLPP 149
           I V A GA+G  +P +   P+    P
Sbjct: 124 ITVVAAGATGGATPGAGATPAPGSTP 146

[Close]

BLAST of Tan0016245.1 vs. TAIR 10
Match: AT2G32300.1 (uclacyanin 1 )

HSP 1 Score: 82.0 bits (201), Expect = 5.1e-16
Identity = 58/159 (36.48%), Postives = 83/159 (52.20%), Query Frame = 0


Query: 1   MAAGVGLVLFAVVFLPL--AAAQTVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLR 60
           MA+   L++ +V+   L      T H +GG +GW+V  S       WAA +TF +GD+L 
Sbjct: 1   MASREMLIIISVLATTLIGLTVATDHTIGGPSGWTVGAS----LRTWAAGQTFAVGDNLV 60

Query: 61  FTFPANAHDVLELETKELFDAC-------SFNNNDNDIKRTSPVVVSLDDPGMHYFVCTI 120
           F++PA  HDV+E+ TK  FD+C       +F N ++        +V L  PG  YF+C +
Sbjct: 61  FSYPAAFHDVVEV-TKPEFDSCQAVKPLITFANGNS--------LVPLTTPGKRYFICGM 120

Query: 121 GPHCSLGQKLSINVSATGASGPMSPSSPRPPSSSLPPPS 151
             HCS G KL +NV  T    P +P     PS + P PS
Sbjct: 121 PGHCSQGMKLEVNVVPTATVAPTAPLPNTVPSLNAPSPS 146

[Close]

BLAST of Tan0016245.1 vs. TAIR 10
Match: AT2G31050.1 (Cupredoxin superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 6.9e-13
Identity = 53/153 (34.64%), Postives = 78/153 (50.98%), Query Frame = 0


Query: 8   VLFAVVFLPLAAAQTVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFTFPANAHD 67
           +L  V    ++   TVH VG S GW++       Y  WA+  TF +GDSL F +  + HD
Sbjct: 13  LLILVALFGISVGGTVHKVGDSDGWTIMSVN---YETWASTITFQVGDSLVFKYNKDFHD 72

Query: 68  VLELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQKLSINV-- 127
           V E+ T   ++ C  +      +  S +V+ L  PG+ +F+C    HC +GQKL I+V  
Sbjct: 73  VTEV-THNDYEMCEPSKPLARYETGSDIVI-LTKPGLQHFICGFPGHCDMGQKLQIHVLP 132

Query: 128 SATGASGPMSPSSPRPPSS-SLPPPSPSSSNAV 158
           ++ G      P   RPPSS S P  SP + + V
Sbjct: 133 ASLGPVAAPVPGPVRPPSSFSSPSQSPLAESPV 160

[Close]

BLAST of Tan0016245.1 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 5.8e-12
Identity = 57/180 (31.67%), Postives = 92/180 (51.11%), Query Frame = 0


Query: 1   MAAGVGLVLFAVVFLPLAAAQTVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFT 60
           MAA +   L  +V +   +   V+ VG SAGW+   +    Y  WA+ KTF +GD++ F 
Sbjct: 1   MAAIIVAALACIVVMLRLSEAAVYKVGDSAGWTTIANVD--YKLWASTKTFHIGDTVLFE 60

Query: 61  FPANAHDVLELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQK 120
           +    H+V+ + T  ++ +C+ +   +    T    ++L + G H+F C +  HC  GQK
Sbjct: 61  YNPQFHNVMRV-THPMYRSCNTSKPISTF-TTGNDSITLTNHGHHFFFCGVPGHCLAGQK 120

Query: 121 LSINV----SATGASGPMSPSSPRPPSSSLPP---PSPSSSNAVMASLYVTLLSAIVMSL 174
           L ++V    S+T  S P + SS  PPS+++P    P PS S A      VT     V++L
Sbjct: 121 LDLHVLLPASSTPLSDPPTSSSSSPPSTTIPAAGVPGPSPSLAASLPSMVTAQIVAVVTL 176

[Close]

BLAST of Tan0016245.1 vs. TAIR 10
Match: AT2G26720.1 (Cupredoxin superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-11
Identity = 58/179 (32.40%), Postives = 84/179 (46.93%), Query Frame = 0


Query: 7   LVLFAVVFLPLAAAQTVHDVGGSAGWSVPQSTPAFYSNWAADKTFLLGDSLRFTFPANAH 66
           L++F  +F  +A   TVH VG + GW++       Y  WA+ + F +GD+L F +  + H
Sbjct: 13  LLIFVTLF-GVAVGGTVHKVGNTKGWTM---IGGDYEAWASSRVFQVGDTLVFAYNKDYH 72

Query: 67  DVLELETKELFDACSFNNNDNDIKRTSPVVVSLDDPGMHYFVCTIGPHCSLGQKLSINV- 126
           DV E+ T   F+ C  +      K T    +SL  PG+ +F+C +  HC  GQKL I+V 
Sbjct: 73  DVTEV-THNDFEMCESSKPLRRYK-TGSDSISLTKPGLQHFICGVPGHCKKGQKLQIHVL 132

Query: 127 ------SATGASGPM----SPSSPRPPSSSLPP----------PSPSSSNAVMASLYVT 165
                  A    GP+    S SSP P     PP          P+P+S +A  A    T
Sbjct: 133 PASLGHVAVPVPGPVRSQSSSSSPSPSPLVDPPVNNAPQYQMGPTPASHSAASADFIFT 185

The following BLAST results are available for this feature:

BLAST of Tan0016245.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29602	4.0e-42	66.41	Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3	[more]
P42849	2.2e-19	46.55	Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1	[more]
Q07488	1.3e-16	38.36	Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2	[more]
O82081	7.2e-15	36.48	Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1	[more]
Q41001	6.1e-14	34.46	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]

BLAST of Tan0016245.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461124.1	6.0e-51	64.44	PREDICTED: cucumber peeling cupredoxin-like [Cucumis melo] >TYK10543.1 cucumber ...	[more]
XP_038896386.1	6.6e-50	64.41	cucumber peeling cupredoxin-like [Benincasa hispida]	[more]
KAA0058749.1	1.8e-47	65.41	cucumber peeling cupredoxin-like [Cucumis melo var. makuwa]	[more]
NP_001267496.1	2.3e-47	62.30	cucumber peeling cupredoxin-like precursor [Cucumis sativus] >AAC32421.1 stellac...	[more]
XP_023547709.1	4.4e-46	61.45	cucumber peeling cupredoxin-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0016245.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CF84	2.9e-51	64.44	Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CDJ1	2.9e-51	64.44	cucumber peeling cupredoxin-like OS=Cucumis melo OX=3656 GN=LOC103499805 PE=4 SV...	[more]
A0A5A7UZ00	8.7e-48	65.41	Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
Q96403	1.1e-47	62.30	Stellacyanin OS=Cucumis sativus OX=3659 GN=Csa_7G432470 PE=2 SV=1	[more]
A0A6J1GPD3	1.8e-45	61.45	cucumber peeling cupredoxin-like OS=Cucurbita moschata OX=3662 GN=LOC111456235 P...	[more]

BLAST of Tan0016245.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20230.1	9.3e-18	38.36	blue-copper-binding protein	[more]
AT2G32300.1	5.1e-16	36.48	uclacyanin 1	[more]
AT2G31050.1	6.9e-13	34.64	Cupredoxin superfamily protein	[more]
AT5G26330.1	5.8e-12	31.67	Cupredoxin superfamily protein	[more]
AT2G26720.1	1.7e-11	32.40	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 32..119 e-value: 9.3E-19 score: 67.2
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 22..127 score: 35.954918
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 19..128 e-value: 2.0E-33 score: 116.9
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 22..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..151
None	No IPR available	PANTHER	PTHR33021:SF189	STELLACYANIN	coord: 7..157
None	No IPR available	CDD	cd13920	Stellacyanin	coord: 22..125 e-value: 1.04342E-46 score: 146.304
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 7..157
IPR028871	Blue (type 1) copper protein, binding site	PROSITE	PS00196	COPPER_BLUE	coord: 103..119

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0016245	Tan0016245	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0016245.1-five_prime_utr	Tan0016245.1-five_prime_utr-LG06:3110823..3111039	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0016245.1-exon	Tan0016245.1-exon-LG06:3110823..3111211	exon
Tan0016245.1-exon	Tan0016245.1-exon-LG06:3112219..3112679	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0016245.1-cds	Tan0016245.1-cds-LG06:3111040..3111211	CDS
Tan0016245.1-cds	Tan0016245.1-cds-LG06:3112219..3112571	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0016245.1-three_prime_utr	Tan0016245.1-three_prime_utr-LG06:3112572..3112679	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0016245.1	Tan0016245.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding