Tan0012908.1 (mRNA) Snake gourd v1

Overview


Name	Tan0012908.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	C2H2-type domain-containing protein
Location	LG07: 6434503 .. 6434916 (-)
Sequence length	414
RNA-Seq Expression	Tan0012908.1
Synteny	Tan0012908.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTCAAAAGAACAAAGTGGTGGGAGTCAATCAACAATAACTAAGTCCCATGAGTGTACTTTTTGCAAGAAGGGCTTCAGAAATGGAAAAGCTTTAGGAGGCCATATGAGGCTACATAGAAAAGAGGTAGCTGAGCTCAAACAATCAACATCAATGTCGTCGTTGTCATTGAACGAGATGAATATTATTGTTGACACTTCGAAAACGATTCGAAATACGACTTCAACCATAGAAGAAACCAAAATTCATGAACTACGAGAACTCTCACTTTTTGTCCAGAAACACTCAGATATGGTGTCGTCGTCTCAACATGGTGTCTCCGAGCTGGATCTTGAACTTAGATTAGGACATGAGCCACAAAACTCAACTTCATCATCAACCTCAATGGCTACTACTAGACATTTCTTTTGA

mRNA sequence

ATGAACTCAAAAGAACAAAGTGGTGGGAGTCAATCAACAATAACTAAGTCCCATGAGTGTACTTTTTGCAAGAAGGGCTTCAGAAATGGAAAAGCTTTAGGAGGCCATATGAGGCTACATAGAAAAGAGGTAGCTGAGCTCAAACAATCAACATCAATGTCGTCGTTGTCATTGAACGAGATGAATATTATTGTTGACACTTCGAAAACGATTCGAAATACGACTTCAACCATAGAAGAAACCAAAATTCATGAACTACGAGAACTCTCACTTTTTGTCCAGAAACACTCAGATATGGTGTCGTCGTCTCAACATGGTGTCTCCGAGCTGGATCTTGAACTTAGATTAGGACATGAGCCACAAAACTCAACTTCATCATCAACCTCAATGGCTACTACTAGACATTTCTTTTGA

Coding sequence (CDS)

ATGAACTCAAAAGAACAAAGTGGTGGGAGTCAATCAACAATAACTAAGTCCCATGAGTGTACTTTTTGCAAGAAGGGCTTCAGAAATGGAAAAGCTTTAGGAGGCCATATGAGGCTACATAGAAAAGAGGTAGCTGAGCTCAAACAATCAACATCAATGTCGTCGTTGTCATTGAACGAGATGAATATTATTGTTGACACTTCGAAAACGATTCGAAATACGACTTCAACCATAGAAGAAACCAAAATTCATGAACTACGAGAACTCTCACTTTTTGTCCAGAAACACTCAGATATGGTGTCGTCGTCTCAACATGGTGTCTCCGAGCTGGATCTTGAACTTAGATTAGGACATGAGCCACAAAACTCAACTTCATCATCAACCTCAATGGCTACTACTAGACATTTCTTTTGA

Protein sequence

MNSKEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIVDTSKTIRNTTSTIEETKIHELRELSLFVQKHSDMVSSSQHGVSELDLELRLGHEPQNSTSSSTSMATTRHFF

Homology

[Close]

BLAST of Tan0012908.1 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 6.9e-05
Identity = 41/133 (30.83%), Postives = 65/133 (48.87%), Query Frame = 0


Query: 15  TKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQ---------------STSMSSLSLN 74
           ++S+ C+FC +GF N +ALGGHM +HR++ A+L+Q               ++ + SL LN
Sbjct: 32  SRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKLMEDNKDDVVAESDASEVVSLDLN 91

Query: 75  EMN-------IIVDTSKTIRNTTST-------IEETKIHELRELSLFVQKHSDMVSSSQH 118
           E            D  + + N  S        ++E+K+ +  +     +   D  SSS H
Sbjct: 92  EQQQQQGEALTCDDHDQYVDNDISPKQKLEFWVQESKL-DTNDHGKVTEASIDGSSSSHH 151

[Close]

BLAST of Tan0012908.1 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-04
Identity = 21/42 (50.00%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 16 KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLS 58
          +S+ C+FCK+ FR+ +ALGGHM +HR++ A L+   S SS S
Sbjct: 45 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSS 86

[Close]

BLAST of Tan0012908.1 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.4e-04
Identity = 17/35 (48.57%), Postives = 29/35 (82.86%), Query Frame = 0


Query: 16 KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQS 51
          +S+ C+FC++ F++ +ALGGHM +HR++ A LKQ+
Sbjct: 37 RSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQA 71

[Close]

BLAST of Tan0012908.1 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 45.1 bits (105), Expect = 7.6e-04
Identity = 21/51 (41.18%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 3  SKEQSGGSQSTI--TKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQST 52
          S E+ GG    +   +S+ C+FC + F++ +ALGGHM +HR++ A LKQ +
Sbjct: 38 SAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQS 88

[Close]

BLAST of Tan0012908.1 vs. NCBI nr
Match: XP_004145329.1 (transcriptional regulator TAC1 [Cucumis sativus] >KGN65749.1 hypothetical protein Csa_019602 [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 2.8e-19
Identity = 78/178 (43.82%), Postives = 100/178 (56.18%), Query Frame = 0


Query: 4   KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNI 63
           +EQSG +QST+ +S+EC FCK+GF N +ALGGHM +HRKE A+LKQS + SSLS +   +
Sbjct: 15  EEQSGVNQSTV-RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNKM 74

Query: 64  IVDTSKTIRNTT-------------------STIEETKI-HELRELSLFVQKH------- 123
           +VDT K +   T                     +EET I  E ++L LFV+ +       
Sbjct: 75  VVDTPKMMSTPTRLPWVVISPSTRKEHGRSKGGLEETLISEEFQQLPLFVENNPSNMDQN 134

Query: 124 --------------SDMVSSSQHG--VSELDLELRLGHEPQNSTSSST-SMATTRHFF 138
                         S + S S+HG  VSELDLELRLG EPQNSTSSS+     T HFF
Sbjct: 135 LEIRQVLPIDVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTSSSSLPTGRTTHFF 191

[Close]

BLAST of Tan0012908.1 vs. NCBI nr
Match: XP_038895788.1 (transcriptional regulator TAC1-like [Benincasa hispida])

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-18
Identity = 74/177 (41.81%), Postives = 93/177 (52.54%), Query Frame = 0


Query: 4   KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNI 63
           +E+  G   +  +S+EC FCK+GF N +ALGGHM +HRKE A+LKQS S  SLS +   +
Sbjct: 13  QEEQSGVNKSAARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSISSPSLSSSSNKM 72

Query: 64  IVDTSKTIRNTT--------------------STIEETKI-HELRELSLFVQKHSDM--- 123
           +VD  K I  TT                       EET I  E+++L LFV+  S+M   
Sbjct: 73  VVDIPKMIPRTTPPQLPWVVSPSMSEGHRRSGGGREETLISEEVQQLPLFVKNTSNMDQN 132

Query: 124 -----------------VSSSQHG--VSELDLELRLGHEPQNSTSSSTSMATTRHFF 138
                             SS +HG  +SELDLELRLG EPQNST SS S   T HFF
Sbjct: 133 LKIHQVLPIEVASDPKLGSSFRHGSSISELDLELRLGPEPQNSTPSSLSTGRTTHFF 189

[Close]

BLAST of Tan0012908.1 vs. NCBI nr
Match: XP_008457447.1 (PREDICTED: transcriptional regulator TAC1-like [Cucumis melo] >KAA0067767.1 transcriptional regulator TAC1-like [Cucumis melo var. makuwa] >TYJ97379.1 transcriptional regulator TAC1-like [Cucumis melo var. makuwa])

HSP 1 Score: 102.4 bits (254), Expect = 3.1e-18
Identity = 77/179 (43.02%), Postives = 99/179 (55.31%), Query Frame = 0


Query: 4   KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNI 63
           +EQSG +QST  +S+EC FCK+GF N +ALGGHM +HRKE A+LKQS + SSLS +   +
Sbjct: 14  QEQSGVNQST-ARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNKM 73

Query: 64  IVDTSKTI--------------------RNTTSTIEETKI-HELRELSLFVQKH------ 123
           +VDT K +                    R+    +EET I  E ++L LFV+ +      
Sbjct: 74  VVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEFQQLPLFVENNPSNIDQ 133

Query: 124 ---------------SDMVSSSQHG--VSELDLELRLGHEPQNST-SSSTSMATTRHFF 138
                          S + S S+HG  VSELDLELRLG EPQNST S+S     T HFF
Sbjct: 134 NLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTPSTSLPTGRTTHFF 191

[Close]

BLAST of Tan0012908.1 vs. NCBI nr
Match: XP_022141797.1 (transcriptional regulator TAC1-like [Momordica charantia])

HSP 1 Score: 100.5 bits (249), Expect = 1.2e-17
Identity = 73/172 (42.44%), Postives = 94/172 (54.65%), Query Frame = 0


Query: 16  KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIV-DTSKTIRN- 75
           +S+ECTFCK+GF N +ALGGHM +HRK+ A++KQS S SSLS++   + V D SK I   
Sbjct: 26  RSYECTFCKRGFTNAQALGGHMNIHRKDKAKMKQSASSSSLSMSSNKMPVDDISKIISTP 85

Query: 76  ---------------------------TTSTIEETKIHELRELSLF-------------- 135
                                      T+ST+EET   ++++L LF              
Sbjct: 86  ARLPWVIPSTTTEGRGRGEDRGEIGEITSSTMEETLKGKVQQLQLFEKSSNMDQKFRVHQ 145

Query: 136 ---VQKHSD--MVSSSQHG--VSELDLELRLGHEPQNSTSSSTSMATTRHFF 138
              ++  SD  MV   QHG  VSELDLELRLG EPQNST SST   ++RHFF
Sbjct: 146 VLPLEASSDQKMVPPFQHGSTVSELDLELRLGPEPQNSTPSSTPTGSSRHFF 197

[Close]

BLAST of Tan0012908.1 vs. NCBI nr
Match: XP_031254022.1 (transcriptional regulator TAC1-like [Pistacia vera])

HSP 1 Score: 84.7 bits (208), Expect = 6.6e-13
Identity = 65/173 (37.57%), Postives = 99/173 (57.23%), Query Frame = 0


Query: 1   MNSKEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQ-STSMSSLSLN 60
           + S EQ+    S + +S++CTFCK+GF N +ALGGHM +HRK+ A+LKQ S+S + L ++
Sbjct: 15  VTSDEQAADGASPV-RSYDCTFCKRGFSNAQALGGHMNIHRKDKAKLKQTSSSKNQLDIS 74

Query: 61  EMN------------IIVDTSKTIRNT-------------TSTIEETKIHELRELSLF-- 120
           ++N             +V T+   R++             TS  ++T + E+R+L LF  
Sbjct: 75  KINQPPYYFTQPPSKDVVATTTQDRSSSKRPWILGEENDATSNTDKTHVREVRQLPLFSE 134

Query: 121 -------VQKHSDMV-SSSQHGVSELDLELRLGHEPQNSTSSSTSMATTRHFF 138
                  V +++++V SSS    SELDLELRLG EPQ+S S+    A T+ FF
Sbjct: 135 RPLISSQVHENTEIVLSSSSSSGSELDLELRLGPEPQDSASA----AATKKFF 182

[Close]

BLAST of Tan0012908.1 vs. ExPASy TrEMBL
Match: A0A0A0LXG2 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G524710 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.3e-19
Identity = 78/178 (43.82%), Postives = 100/178 (56.18%), Query Frame = 0


Query: 4   KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNI 63
           +EQSG +QST+ +S+EC FCK+GF N +ALGGHM +HRKE A+LKQS + SSLS +   +
Sbjct: 15  EEQSGVNQSTV-RSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNKM 74

Query: 64  IVDTSKTIRNTT-------------------STIEETKI-HELRELSLFVQKH------- 123
           +VDT K +   T                     +EET I  E ++L LFV+ +       
Sbjct: 75  VVDTPKMMSTPTRLPWVVISPSTRKEHGRSKGGLEETLISEEFQQLPLFVENNPSNMDQN 134

Query: 124 --------------SDMVSSSQHG--VSELDLELRLGHEPQNSTSSST-SMATTRHFF 138
                         S + S S+HG  VSELDLELRLG EPQNSTSSS+     T HFF
Sbjct: 135 LEIRQVLPIDVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTSSSSLPTGRTTHFF 191

[Close]

BLAST of Tan0012908.1 vs. ExPASy TrEMBL
Match: A0A5A7VKP9 (Transcriptional regulator TAC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001930 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-18
Identity = 77/179 (43.02%), Postives = 99/179 (55.31%), Query Frame = 0


Query: 4   KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNI 63
           +EQSG +QST  +S+EC FCK+GF N +ALGGHM +HRKE A+LKQS + SSLS +   +
Sbjct: 14  QEQSGVNQST-ARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNKM 73

Query: 64  IVDTSKTI--------------------RNTTSTIEETKI-HELRELSLFVQKH------ 123
           +VDT K +                    R+    +EET I  E ++L LFV+ +      
Sbjct: 74  VVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEFQQLPLFVENNPSNIDQ 133

Query: 124 ---------------SDMVSSSQHG--VSELDLELRLGHEPQNST-SSSTSMATTRHFF 138
                          S + S S+HG  VSELDLELRLG EPQNST S+S     T HFF
Sbjct: 134 NLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTPSTSLPTGRTTHFF 191

[Close]

BLAST of Tan0012908.1 vs. ExPASy TrEMBL
Match: A0A1S3C679 (transcriptional regulator TAC1-like OS=Cucumis melo OX=3656 GN=LOC103497134 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-18
Identity = 77/179 (43.02%), Postives = 99/179 (55.31%), Query Frame = 0


Query: 4   KEQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNI 63
           +EQSG +QST  +S+EC FCK+GF N +ALGGHM +HRKE A+LKQS + SSLS +   +
Sbjct: 14  QEQSGVNQST-ARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQSITTSSLSSSPNKM 73

Query: 64  IVDTSKTI--------------------RNTTSTIEETKI-HELRELSLFVQKH------ 123
           +VDT K +                    R+    +EET I  E ++L LFV+ +      
Sbjct: 74  VVDTPKMMSTPTRFPWVVISPSTREEHGRSNRCGLEETLISEEFQQLPLFVENNPSNIDQ 133

Query: 124 ---------------SDMVSSSQHG--VSELDLELRLGHEPQNST-SSSTSMATTRHFF 138
                          S + S S+HG  VSELDLELRLG EPQNST S+S     T HFF
Sbjct: 134 NLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNSTPSTSLPTGRTTHFF 191

[Close]

BLAST of Tan0012908.1 vs. ExPASy TrEMBL
Match: A0A6J1CKV7 (transcriptional regulator TAC1-like OS=Momordica charantia OX=3673 GN=LOC111012082 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 5.7e-18
Identity = 73/172 (42.44%), Postives = 94/172 (54.65%), Query Frame = 0


Query: 16  KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNIIV-DTSKTIRN- 75
           +S+ECTFCK+GF N +ALGGHM +HRK+ A++KQS S SSLS++   + V D SK I   
Sbjct: 26  RSYECTFCKRGFTNAQALGGHMNIHRKDKAKMKQSASSSSLSMSSNKMPVDDISKIISTP 85

Query: 76  ---------------------------TTSTIEETKIHELRELSLF-------------- 135
                                      T+ST+EET   ++++L LF              
Sbjct: 86  ARLPWVIPSTTTEGRGRGEDRGEIGEITSSTMEETLKGKVQQLQLFEKSSNMDQKFRVHQ 145

Query: 136 ---VQKHSD--MVSSSQHG--VSELDLELRLGHEPQNSTSSSTSMATTRHFF 138
              ++  SD  MV   QHG  VSELDLELRLG EPQNST SST   ++RHFF
Sbjct: 146 VLPLEASSDQKMVPPFQHGSTVSELDLELRLGPEPQNSTPSSTPTGSSRHFF 197

[Close]

BLAST of Tan0012908.1 vs. ExPASy TrEMBL
Match: I1LJY1 (C2H2-type domain-containing protein OS=Glycine max OX=3847 GN=102667172 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 7.2e-13
Identity = 56/151 (37.09%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 5   EQSGGSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNEMNII 64
           E+ G S  T ++S EC FC++GF N +ALGGHM +HRK+ A+LKQ  S + +  ++    
Sbjct: 22  EEQGASHVT-SRSFECNFCRRGFSNAQALGGHMNIHRKDKAKLKQQQSSNQIQQDQAKSY 81

Query: 65  -VDTSKTIRNTTSTIEETKIHELRELSLFVQKHSDMVS-----------------SSQHG 124
             D++K   N   +++E  IH+ ++L LF +  +   +                 S+Q  
Sbjct: 82  GEDSNKQKWNWNVSLQEHAIHKRQQLPLFAESPTSSETQKPQQGQTQTTTEQASLSTQDS 141

Query: 125 VSELDLELRLGHEPQNSTSSSTSMATTRHFF 138
            SELDLELRLG EPQ+S+++ T    TR+FF
Sbjct: 142 SSELDLELRLGPEPQDSSAAETG---TRNFF 168

[Close]

BLAST of Tan0012908.1 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 6.9e-08
Identity = 42/126 (33.33%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 4   KEQSGGSQSTIT-KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLSLNE-- 63
           +  S  S ST+T + +ECTFCK+GF N +ALGGHM +HR++     +  + + ++L++  
Sbjct: 20  RRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDRLNKAKVQNDADVALSQTH 79

Query: 64  --MNIIVD-------TSKTIRNTTSTIEETKIHELRELSLFVQKHSDMVSSSQHGVSELD 118
              ++  D        S  +R TTS      I  LR  S+  ++ + +V       +E+D
Sbjct: 80  RCFHVASDLGGYEQVDSVVLRTTTSNY----IQHLRIGSMATRRENVVVEG-----NEID 136

[Close]

BLAST of Tan0012908.1 vs. TAIR 10
Match: AT3G53820.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 3.8e-06
Identity = 39/136 (28.68%), Postives = 65/136 (47.79%), Query Frame = 0


Query: 9   GSQSTITKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQ---------------STSM 68
           GSQ+   + + C FC++GF N +ALGGHM +HRK+ A+L+Q               S + 
Sbjct: 15  GSQA---RPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQANLKEEDSEDAICTTSRNR 74

Query: 69  SSLSLNEMNIIVDTSKTIRNTTSTIEETKIHELRELSLFVQKHSDMVSSSQHGVSELDLE 128
               L E+   VDT    R       E  + +  + ++ +     +  +       +DLE
Sbjct: 75  FGQELIELPFFVDTVGPRRKGEDDKSEKGLGDEEKKNMRI-----LQKALSQSADVIDLE 134

Query: 129 LRLGHEPQNSTSSSTS 130
           LRLG +P   T+S+++
Sbjct: 135 LRLGLDPYKKTTSTST 142

[Close]

BLAST of Tan0012908.1 vs. TAIR 10
Match: AT3G09290.1 (telomerase activator1 )

HSP 1 Score: 48.5 bits (114), Expect = 4.9e-06
Identity = 41/133 (30.83%), Postives = 65/133 (48.87%), Query Frame = 0


Query: 15  TKSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQ---------------STSMSSLSLN 74
           ++S+ C+FC +GF N +ALGGHM +HR++ A+L+Q               ++ + SL LN
Sbjct: 32  SRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQKLMEDNKDDVVAESDASEVVSLDLN 91

Query: 75  EMN-------IIVDTSKTIRNTTST-------IEETKIHELRELSLFVQKHSDMVSSSQH 118
           E            D  + + N  S        ++E+K+ +  +     +   D  SSS H
Sbjct: 92  EQQQQQGEALTCDDHDQYVDNDISPKQKLEFWVQESKL-DTNDHGKVTEASIDGSSSSHH 151

[Close]

BLAST of Tan0012908.1 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 8.4e-06
Identity = 21/42 (50.00%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 16 KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQSTSMSSLS 58
          +S+ C+FCK+ FR+ +ALGGHM +HR++ A L+   S SS S
Sbjct: 45 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSS 86

[Close]

BLAST of Tan0012908.1 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 46.2 bits (108), Expect = 2.4e-05
Identity = 17/35 (48.57%), Postives = 29/35 (82.86%), Query Frame = 0


Query: 16 KSHECTFCKKGFRNGKALGGHMRLHRKEVAELKQS 51
          +S+ C+FC++ F++ +ALGGHM +HR++ A LKQ+
Sbjct: 37 RSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQA 71

The following BLAST results are available for this feature:

BLAST of Tan0012908.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR34	6.9e-05	30.83	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]
Q38895	1.2e-04	50.00	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
O80942	3.4e-04	48.57	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q9LHS9	7.6e-04	41.18	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Tan0012908.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145329.1	2.8e-19	43.82	transcriptional regulator TAC1 [Cucumis sativus] >KGN65749.1 hypothetical protei...	[more]
XP_038895788.1	1.4e-18	41.81	transcriptional regulator TAC1-like [Benincasa hispida]	[more]
XP_008457447.1	3.1e-18	43.02	PREDICTED: transcriptional regulator TAC1-like [Cucumis melo] >KAA0067767.1 tran...	[more]
XP_022141797.1	1.2e-17	42.44	transcriptional regulator TAC1-like [Momordica charantia]	[more]
XP_031254022.1	6.6e-13	37.57	transcriptional regulator TAC1-like [Pistacia vera]	[more]

BLAST of Tan0012908.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXG2	1.3e-19	43.82	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G524710 P...	[more]
A0A5A7VKP9	1.5e-18	43.02	Transcriptional regulator TAC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C679	1.5e-18	43.02	transcriptional regulator TAC1-like OS=Cucumis melo OX=3656 GN=LOC103497134 PE=4...	[more]
A0A6J1CKV7	5.7e-18	42.44	transcriptional regulator TAC1-like OS=Momordica charantia OX=3673 GN=LOC1110120...	[more]
I1LJY1	7.2e-13	37.09	C2H2-type domain-containing protein OS=Glycine max OX=3847 GN=102667172 PE=4 SV=...	[more]

BLAST of Tan0012908.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43540.1	6.9e-08	33.33	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G53820.1	3.8e-06	28.68	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G09290.1	4.9e-06	30.83	telomerase activator1	[more]
AT3G23130.1	8.4e-06	50.00	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	2.4e-05	48.57	zinc-finger protein 10	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 3..85 e-value: 1.9E-7 score: 32.7
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 18..43 e-value: 6.8E-8 score: 32.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..137
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 93..125 coord: 3..80
None	No IPR available	PANTHER	PTHR45801:SF58	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 3..80 coord: 93..125
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 20..40
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 18..45 score: 10.470842
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 15..43

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0012908	Tan0012908	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0012908.1-cds	Tan0012908.1-cds-LG07:6434503..6434916	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0012908.1-exon	Tan0012908.1-exon-LG07:6434503..6434916	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0012908.1	Tan0012908.1-protein	polypeptide