Tan0011226.1 (mRNA) Snake gourd v1

Overview


Name	Tan0011226.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	S-protein homolog
Location	LG06: 17066405 .. 17066842 (+)
Sequence length	438
RNA-Seq Expression	Tan0011226.1
Synteny	Tan0011226.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCCAAGTTTCGTTCTTTATCTTGTTTCAATGACTCTATTAATGGTTCAGCCCTTTGTGGCAGCTGTGCCACCTCCAATATACGTTGATAAGTGGCACATTCATGTGGTTAACGGGCTGAGCAATGGCAATTTGTTTGTACACTGCAAATCCAAAGATACCGATGTGGGAGAACACTATATTAACCATGGAGCTGAGATCCAATGGAGCTTTAGTGAAAATGTTTGGGGAACAACGTTGTTTTGGTGCTTTTTTAGAAAACCAAGTGGTGTCTCTGTGTCTTCTGATGTGTTTTGGCATGAAACTGAACATTATTGGCTCCATTATAGGTGCACCACTGAGGGAACTTGCATTTGGACTGCCAAAGATGATGGAATTTACTTGAAAAACATTCCGGATAATCTTGATGAGTTGATTCATAAGTGGAACAGTTAG

mRNA sequence

ATGAGTCCAAGTTTCGTTCTTTATCTTGTTTCAATGACTCTATTAATGGTTCAGCCCTTTGTGGCAGCTGTGCCACCTCCAATATACGTTGATAAGTGGCACATTCATGTGGTTAACGGGCTGAGCAATGGCAATTTGTTTGTACACTGCAAATCCAAAGATACCGATGTGGGAGAACACTATATTAACCATGGAGCTGAGATCCAATGGAGCTTTAGTGAAAATGTTTGGGGAACAACGTTGTTTTGGTGCTTTTTTAGAAAACCAAGTGGTGTCTCTGTGTCTTCTGATGTGTTTTGGCATGAAACTGAACATTATTGGCTCCATTATAGGTGCACCACTGAGGGAACTTGCATTTGGACTGCCAAAGATGATGGAATTTACTTGAAAAACATTCCGGATAATCTTGATGAGTTGATTCATAAGTGGAACAGTTAG

Coding sequence (CDS)

ATGAGTCCAAGTTTCGTTCTTTATCTTGTTTCAATGACTCTATTAATGGTTCAGCCCTTTGTGGCAGCTGTGCCACCTCCAATATACGTTGATAAGTGGCACATTCATGTGGTTAACGGGCTGAGCAATGGCAATTTGTTTGTACACTGCAAATCCAAAGATACCGATGTGGGAGAACACTATATTAACCATGGAGCTGAGATCCAATGGAGCTTTAGTGAAAATGTTTGGGGAACAACGTTGTTTTGGTGCTTTTTTAGAAAACCAAGTGGTGTCTCTGTGTCTTCTGATGTGTTTTGGCATGAAACTGAACATTATTGGCTCCATTATAGGTGCACCACTGAGGGAACTTGCATTTGGACTGCCAAAGATGATGGAATTTACTTGAAAAACATTCCGGATAATCTTGATGAGTTGATTCATAAGTGGAACAGTTAG

Protein sequence

MSPSFVLYLVSMTLLMVQPFVAAVPPPIYVDKWHIHVVNGLSNGNLFVHCKSKDTDVGEHYINHGAEIQWSFSENVWGTTLFWCFFRKPSGVSVSSDVFWHETEHYWLHYRCTTEGTCIWTAKDDGIYLKNIPDNLDELIHKWNS

Homology

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BLAST of Tan0011226.1 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-20
Identity = 48/115 (41.74%), Postives = 68/115 (59.13%), Query Frame = 0


Query: 30  VDKWHIHVVNGLSNG-NLFVHCKSKDTDVGEHYINHGAEIQWSFSENVWGTTLFWCFFRK 89
           + +W + VVNGL+ G  LF+HCKSK+ D+GE  +       W+F EN+  +T FWC+  K
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 90  PSGVSVSSDVFWHETEHYWLHYRCTTEGTCIWTAKDDGIYLKNIPDNLDELIHKW 144
            +G  ++ +VFW +     L +RC  +  CIWTAK DG+YL N     D L  KW
Sbjct: 98  DNG-HMNVNVFWDDV---ILFHRCGWK-NCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Tan0011226.1 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.7e-20
Identity = 47/117 (40.17%), Postives = 68/117 (58.12%), Query Frame = 0


Query: 30  VDKWHIHVVNGLSNG-NLFVHCKSKDTDVGEHYINHGAEIQWSFSENVWGTTLFWCFFRK 89
           + +W + V NGL+ G  LF+HCKSK+ D+G+  +       W+F EN+  +TLFWC+  K
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 90  PSGVSVSSDVFWHETEHYWLHYRCTTEGTCIWTAKDDGIYLKNIPDNLDELIHKWNS 146
             G  ++  VFW +     L +RC  +  C+WTAK+DG+YL N     D L  KW S
Sbjct: 98  DDG-HMNVKVFWDDV---ILFHRCDWK-NCVWTAKNDGLYLWNSAIGEDVLSEKWKS 149

[Close]

BLAST of Tan0011226.1 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.9e-09
Identity = 37/104 (35.58%), Postives = 49/104 (47.12%), Query Frame = 0


Query: 28  IYVDKWHIHVVNGLSNGN---LFVHCKSKDTDVGEHYINHGAEIQWSFSENVWGTTLFWC 87
           +Y  K  I V N L+  N   L VHCKSK+ D+G  Y+  G  + +SF  N WGTT FWC
Sbjct: 19  VYGKKSTITVKNELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWC 78

Query: 88  FFRKPSGVSVSSDVFWHETEHYWLHYRCTTEGTCIWTAKDDGIY 129
              K         +    T +  +        +  W A+DDGIY
Sbjct: 79  NLYKGPDYKRYRGI----TAYQAIGLFAKDGSSYNWLARDDGIY 118

[Close]

BLAST of Tan0011226.1 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07
Identity = 32/98 (32.65%), Postives = 44/98 (44.90%), Query Frame = 0


Query: 46  LFVHCKSKDTDVGEHYINHGAEIQWSFSENVWGTTLFWCFFRKPSGVSVSSDVFWHETEH 105
           L VHCKS+D D G H +  G    W F  N   +TL++C F +        D++    + 
Sbjct: 44  LGVHCKSRDDDHGFHILQKGGLYGWMFYVNFMNSTLYFCGFSQEQVKKGVFDIYKAVRD- 103

Query: 106 YWLHYRCTTEGTCIWTAKDDGIYLKNIPDNLDELIHKW 144
                RC     C W AK+DGIY        + L +KW
Sbjct: 104 ---SSRCR---NCTWEAKEDGIYGYGEIPKKNPLFYKW 134

[Close]

BLAST of Tan0011226.1 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-07
Identity = 31/92 (33.70%), Postives = 42/92 (45.65%), Query Frame = 0


Query: 46  LFVHCKSKDTDVGEHYINHGAEIQWSFSENVWGTTLFWCFFRKPSGVSVSSDVFWHETEH 105
           L +HCKSKD D+G H    G    W F  N   +TL++C F +        D+   E + 
Sbjct: 59  LGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDIDRAERD- 118

Query: 106 YWLHYRCTTEGTCIWTAKDDGIY-LKNIPDNL 137
               YRC     C W AK D +Y   N+P  +
Sbjct: 119 ---FYRCR---NCTWNAKKDSLYGYSNLPQTV 143

[Close]

BLAST of Tan0011226.1 vs. NCBI nr
Match: XP_022143724.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 236.1 bits (601), Expect = 1.9e-58
Identity = 102/145 (70.34%), Postives = 115/145 (79.31%), Query Frame = 0


Query: 1   MSPSFVLYLVSMTLLMVQPFVAAVPPPIYVDKWHIHVVNGLSNGNLFVHCKSKDTDVGEH 60
           M  + VL  V   L + QPFV A+ P  YVDKWH+HVVNGLSN  LF HCKS+DTD+GEH
Sbjct: 1   MGANVVLLAVLAALTVAQPFVEALAPTPYVDKWHVHVVNGLSNATLFAHCKSRDTDLGEH 60

Query: 61  YINHGAEIQWSFSENVWGTTLFWCFFRKPSGVSVSSDVFWHETEHYWLHYRCTTEGTCIW 120
            +N GAEIQWSF ENVWGTTLFWCF +KP G S S DVFW E +H WLHYRCT +GTCIW
Sbjct: 61  NLNRGAEIQWSFKENVWGTTLFWCFLKKPGG-SASFDVFWREVDHLWLHYRCTNDGTCIW 120

Query: 121 TAKDDGIYLKNIPDNLDELIHKWNS 146
           TAKDDGIY++NIPDNLDEL+HKW S
Sbjct: 121 TAKDDGIYIRNIPDNLDELVHKWTS 144

[Close]

BLAST of Tan0011226.1 vs. NCBI nr
Match: XP_038896414.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 234.6 bits (597), Expect = 5.5e-58
Identity = 97/143 (67.83%), Postives = 118/143 (82.52%), Query Frame = 0


Query: 4   SFVLYLVSMTLLMVQP---FVAAVPPPIYVDKWHIHVVNGLSNGNLFVHCKSKDTDVGEH 63
           S+++ L+S+  ++V     FV AV PP +VDKWH+HV+NGLSNG LFVHCKS+DTD+GE 
Sbjct: 6   SYLVVLMSVLFMVVHQQHVFVGAVLPPAFVDKWHVHVINGLSNGKLFVHCKSRDTDIGEQ 65

Query: 64  YINHGAEIQWSFSENVWGTTLFWCFFRKPSGVSVSSDVFWHETEHYWLHYRCTTEGTCIW 123
           YINHGAEIQWSF ENVWGTTLFWCF + P+G   S +VFWHE +HYWLHYRCT +GTC W
Sbjct: 66  YINHGAEIQWSFKENVWGTTLFWCFVKNPNGSFASFEVFWHEAQHYWLHYRCTLQGTCFW 125

Query: 124 TAKDDGIYLKNIPDNLDELIHKW 144
           TAKDDGIYL+NIPD ++E IH+W
Sbjct: 126 TAKDDGIYLRNIPDGIEEKIHEW 148

[Close]

BLAST of Tan0011226.1 vs. NCBI nr
Match: KAE8646235.1 (hypothetical protein Csa_015792, partial [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 4.5e-52
Identity = 89/125 (71.20%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 20  FVAAVPPPIYVDKWHIHVVNGLSNGNLFVHCKSKDTDVGEHYINHGAEIQWSFSENVWGT 79
           FV AV PP  V+KWHIHV+NGLSNG L  HCKS+DTD+GE YI+HG+EIQWSF ENV+G+
Sbjct: 4   FVGAVLPPAIVNKWHIHVINGLSNGKLMAHCKSRDTDIGEQYIDHGSEIQWSFKENVFGS 63

Query: 80  TLFWCFFRKPSGVSVSSDVFWHETEHYWLHYRCT-TEGTCIWTAKDDGIYLKNIPDNLDE 139
           TLFWCF R P+G   S +VFWHET+HYWLHYRCT  +GTC W AKDDGIYL+NIPD++DE
Sbjct: 64  TLFWCFMRTPNGSFSSFEVFWHETQHYWLHYRCTLDQGTCYWIAKDDGIYLRNIPDSIDE 123

Query: 140 LIHKW 144
            IH+W
Sbjct: 124 KIHEW 128

[Close]

BLAST of Tan0011226.1 vs. NCBI nr
Match: XP_022148919.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 179.5 bits (454), Expect = 2.1e-41
Identity = 79/111 (71.17%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 33  WHIHVVNGLSNGNLFVHCKSKDTDVGEHYINHGAEIQWSFSENVWGTTLFWCFFRKPSGV 92
           WHIHVVNGLS  +LFVHCKSKD DVG H +  G EIQWSF ENVWGTTLFWCF RKP G 
Sbjct: 72  WHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKP-GA 131

Query: 93  SVSSDVFWHETEHYWLHYRCTTEGTCIWTAKDDGIYLKNIPDNLDELIHKW 144
           + S DVFW E+ H WLH+RC    TCIW AKDDGIYL+N  D++DELIHKW
Sbjct: 132 TASFDVFWVESRHNWLHHRCAIL-TCIWIAKDDGIYLRNNSDHIDELIHKW 180

[Close]

BLAST of Tan0011226.1 vs. NCBI nr
Match: XP_022155194.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 175.6 bits (444), Expect = 3.0e-40
Identity = 84/142 (59.15%), Postives = 104/142 (73.24%), Query Frame = 0


Query: 6   VLYLVSMTLLMVQPFVAAVPPPIYVDKWHIHVVNGLS-NGNLFVHCKSKDTDVGEHY-IN 65
           VL +  + L++V+P V A+  P+ +DKW+IHVVNGLS N  LFVHCKSKD D+G H+ I 
Sbjct: 2   VLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIG 61

Query: 66  HGAEIQWSFSENVWGTTLFWCFFRKPSGVSVSSDVFWHETEHYWLHYRCTTEGTCIWTAK 125
            G E+QW+F  N W TTL+WCF  KP+   VS D FW E  H WL YRC  +G CIWTAK
Sbjct: 62  RGDELQWTFRINFWKTTLYWCFMHKPN-ADVSFDSFWVEKTHIWLTYRC-KDGICIWTAK 121

Query: 126 DDGIYLKNIPDNLDELIHKWNS 146
           DDGIYL+NIP+N DEL+HKWN+
Sbjct: 122 DDGIYLRNIPNNDDELVHKWNT 141

[Close]

BLAST of Tan0011226.1 vs. ExPASy TrEMBL
Match: A0A6J1CQ65 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013561 PE=3 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.1e-59
Identity = 102/145 (70.34%), Postives = 115/145 (79.31%), Query Frame = 0


Query: 1   MSPSFVLYLVSMTLLMVQPFVAAVPPPIYVDKWHIHVVNGLSNGNLFVHCKSKDTDVGEH 60
           M  + VL  V   L + QPFV A+ P  YVDKWH+HVVNGLSN  LF HCKS+DTD+GEH
Sbjct: 1   MGANVVLLAVLAALTVAQPFVEALAPTPYVDKWHVHVVNGLSNATLFAHCKSRDTDLGEH 60

Query: 61  YINHGAEIQWSFSENVWGTTLFWCFFRKPSGVSVSSDVFWHETEHYWLHYRCTTEGTCIW 120
            +N GAEIQWSF ENVWGTTLFWCF +KP G S S DVFW E +H WLHYRCT +GTCIW
Sbjct: 61  NLNRGAEIQWSFKENVWGTTLFWCFLKKPGG-SASFDVFWREVDHLWLHYRCTNDGTCIW 120

Query: 121 TAKDDGIYLKNIPDNLDELIHKWNS 146
           TAKDDGIY++NIPDNLDEL+HKW S
Sbjct: 121 TAKDDGIYIRNIPDNLDELVHKWTS 144

[Close]

BLAST of Tan0011226.1 vs. ExPASy TrEMBL
Match: A0A6J1D5G6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111017469 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.0e-41
Identity = 79/111 (71.17%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 33  WHIHVVNGLSNGNLFVHCKSKDTDVGEHYINHGAEIQWSFSENVWGTTLFWCFFRKPSGV 92
           WHIHVVNGLS  +LFVHCKSKD DVG H +  G EIQWSF ENVWGTTLFWCF RKP G 
Sbjct: 72  WHIHVVNGLSKDSLFVHCKSKDNDVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKP-GA 131

Query: 93  SVSSDVFWHETEHYWLHYRCTTEGTCIWTAKDDGIYLKNIPDNLDELIHKW 144
           + S DVFW E+ H WLH+RC    TCIW AKDDGIYL+N  D++DELIHKW
Sbjct: 132 TASFDVFWVESRHNWLHHRCAIL-TCIWIAKDDGIYLRNNSDHIDELIHKW 180

[Close]

BLAST of Tan0011226.1 vs. ExPASy TrEMBL
Match: A0A6J1DPJ1 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022329 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.5e-40
Identity = 84/142 (59.15%), Postives = 104/142 (73.24%), Query Frame = 0


Query: 6   VLYLVSMTLLMVQPFVAAVPPPIYVDKWHIHVVNGLS-NGNLFVHCKSKDTDVGEHY-IN 65
           VL +  + L++V+P V A+  P+ +DKW+IHVVNGLS N  LFVHCKSKD D+G H+ I 
Sbjct: 2   VLLVFWVVLVVVRPGVVALHLPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIG 61

Query: 66  HGAEIQWSFSENVWGTTLFWCFFRKPSGVSVSSDVFWHETEHYWLHYRCTTEGTCIWTAK 125
            G E+QW+F  N W TTL+WCF  KP+   VS D FW E  H WL YRC  +G CIWTAK
Sbjct: 62  RGDELQWTFRINFWKTTLYWCFMHKPN-ADVSFDSFWVEKTHIWLTYRC-KDGICIWTAK 121

Query: 126 DDGIYLKNIPDNLDELIHKWNS 146
           DDGIYL+NIP+N DEL+HKWN+
Sbjct: 122 DDGIYLRNIPNNDDELVHKWNT 141

[Close]

BLAST of Tan0011226.1 vs. ExPASy TrEMBL
Match: A0A6J1CRU0 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 3.4e-37
Identity = 75/140 (53.57%), Postives = 96/140 (68.57%), Query Frame = 0


Query: 5   FVLYLVSMTLLMVQPFVAAVPPPIYVDKWHIHVVNGLSNG-NLFVHCKSKDTDVGEHYIN 64
           F+++L+ ++L++++P  A       + KW IHVVNGLSNG  LFVHCKSKD D+GEH +N
Sbjct: 14  FLVFLLVLSLVILEPIEAFSE----LKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLN 73

Query: 65  HGAEIQWSFSENVWGTTLFWCFFRKPSGVSVSSDVFWHETEHYWLHYRCTTEGTCIWTAK 124
            G E  W+F  N+W TTLFWC+  KP G S S DVFW E +  WL YRC     CIWTAK
Sbjct: 74  SGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRC-YHSNCIWTAK 133

Query: 125 DDGIYLKNIPDNLDELIHKW 144
           DDGIYL++ P   D L+H+W
Sbjct: 134 DDGIYLRDNPVQRDILVHEW 148

[Close]

BLAST of Tan0011226.1 vs. ExPASy TrEMBL
Match: A0A6J1CQI8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013653 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 4.4e-37
Identity = 79/142 (55.63%), Postives = 94/142 (66.20%), Query Frame = 0


Query: 6   VLYLVSMTLLMVQPFVAAVPPPIYVDKWHIHVVNGLSNGNLFVHCKSKDTDVGEHYINHG 65
           VL LVS  L+  Q   +  P  +   +WH+HVVN L+N  L VHCKSKD D+G   +  G
Sbjct: 13  VLLLVSAALVGAQTKPSGSPSLLVTQRWHVHVVNNLNNNFLDVHCKSKDDDLGYQRLVRG 72

Query: 66  AEIQWSFSENVWGTTLFWCFFRKPSGVSVSSDVFWHETEHYWLHYRC--TTEGTCIWTAK 125
           A+ QWSF  N WGTTLFWC   KP G  V+ +VFW E+ + WL  RC   TEG CIWTAK
Sbjct: 73  ADFQWSFKVNFWGTTLFWCNLHKP-GAYVTFEVFWPESRNAWLRNRCHNGTEGHCIWTAK 132

Query: 126 DDGIYLKNIPDNLDELIHKWNS 146
           DDGIYL+NIP N +ELIHKW S
Sbjct: 133 DDGIYLRNIPTNSEELIHKWIS 153

[Close]

BLAST of Tan0011226.1 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 100.9 bits (250), Expect = 8.8e-22
Identity = 48/115 (41.74%), Postives = 68/115 (59.13%), Query Frame = 0


Query: 30  VDKWHIHVVNGLSNG-NLFVHCKSKDTDVGEHYINHGAEIQWSFSENVWGTTLFWCFFRK 89
           + +W + VVNGL+ G  LF+HCKSK+ D+GE  +       W+F EN+  +T FWC+  K
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 90  PSGVSVSSDVFWHETEHYWLHYRCTTEGTCIWTAKDDGIYLKNIPDNLDELIHKW 144
            +G  ++ +VFW +     L +RC  +  CIWTAK DG+YL N     D L  KW
Sbjct: 98  DNG-HMNVNVFWDDV---ILFHRCGWK-NCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Tan0011226.1 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 99.0 bits (245), Expect = 3.4e-21
Identity = 47/117 (40.17%), Postives = 68/117 (58.12%), Query Frame = 0


Query: 30  VDKWHIHVVNGLSNG-NLFVHCKSKDTDVGEHYINHGAEIQWSFSENVWGTTLFWCFFRK 89
           + +W + V NGL+ G  LF+HCKSK+ D+G+  +       W+F EN+  +TLFWC+  K
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 90  PSGVSVSSDVFWHETEHYWLHYRCTTEGTCIWTAKDDGIYLKNIPDNLDELIHKWNS 146
             G  ++  VFW +     L +RC  +  C+WTAK+DG+YL N     D L  KW S
Sbjct: 98  DDG-HMNVKVFWDDV---ILFHRCDWK-NCVWTAKNDGLYLWNSAIGEDVLSEKWKS 149

[Close]

BLAST of Tan0011226.1 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-13
Identity = 37/113 (32.74%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 35  IHVVNGL----SNGNLFVHCKSKDTDVGEHYINHGAEIQWSFSENVWGTTLFWCFFRKPS 94
           +H+ N L     + +LFV CKS   D+G+HY+ +G   Q+   +N W TTLFWC FR   
Sbjct: 26  LHIWNDLDPNQKHSDLFVQCKSGKADMGKHYVKYGKIYQFDIRDNFWKTTLFWCTFRHGP 85

Query: 95  GVSVSSDVFWHETEHYWLHYRCTTEGTCIWTAKDDGIYLKNIPDNLDELIHKW 144
                      + + Y         GT  WTA++DGIY + +       +H W
Sbjct: 86  DYRTG-----QQFDVYEYKPGVAQGGTYEWTAREDGIYFR-LNQGTIHKVHNW 132

[Close]

BLAST of Tan0011226.1 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10
Identity = 29/83 (34.94%), Postives = 44/83 (53.01%), Query Frame = 0


Query: 46  LFVHCKSKDTDVGEHYINHGAEIQWSFSENVWGTTLFWCFFRKPSGVSVSSDVFWHETEH 105
           L VHC+SKD D+GEH +  G + +++F +N+W TT F C   +        D   +ET  
Sbjct: 41  LKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETS- 100

Query: 106 YWLHYRCTTEGTCIWTAKDDGIY 129
               +    E +C W  ++DGIY
Sbjct: 101 ----WSKALEASCKWIGREDGIY 118

[Close]

BLAST of Tan0011226.1 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.2 bits (152), Expect = 2.0e-10
Identity = 34/107 (31.78%), Postives = 51/107 (47.66%), Query Frame = 0


Query: 37  VVNGLSNGNLFVHCKSKDTDVGEHYINHGAEIQWSFSENVWGTTLFWCFFRKPSGVSVSS 96
           V N L+N  L V C+SKD ++G+H +  G   + +F +NVW  TLFWC   K  G     
Sbjct: 26  VKNELNNKVLGVRCRSKDDNLGDHILRVGQMTKNNFDDNVWRRTLFWCNLWK--GPDFKL 85

Query: 97  DVFWHETEHYWLHYRCTTEGTCIWTAKDDGIYLKNIPDNLDELIHKW 144
            V +      W   +       +W A++DGIY    P+   +  + W
Sbjct: 86  HVAFDAYRSQW---KADIGPRYLWIAREDGIYYTQHPETPPKKKYDW 127

The following BLAST results are available for this feature:

BLAST of Tan0011226.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.2e-20	41.74	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	4.7e-20	40.17	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
Q9LW22	4.9e-09	35.58	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
F2Q9V4	2.1e-07	32.65	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]
Q9FI84	4.6e-07	33.70	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]

BLAST of Tan0011226.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143724.1	1.9e-58	70.34	S-protein homolog 1-like [Momordica charantia]	[more]
XP_038896414.1	5.5e-58	67.83	S-protein homolog 1-like [Benincasa hispida]	[more]
KAE8646235.1	4.5e-52	71.20	hypothetical protein Csa_015792, partial [Cucumis sativus]	[more]
XP_022148919.1	2.1e-41	71.17	S-protein homolog 1-like [Momordica charantia]	[more]
XP_022155194.1	3.0e-40	59.15	S-protein homolog 1-like [Momordica charantia]	[more]

BLAST of Tan0011226.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQ65	9.1e-59	70.34	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013561 PE=3 SV=1	[more]
A0A6J1D5G6	1.0e-41	71.17	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111017469 PE=3 SV=1	[more]
A0A6J1DPJ1	1.5e-40	59.15	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022329 PE=3 SV=1	[more]
A0A6J1CRU0	3.4e-37	53.57	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1	[more]
A0A6J1CQI8	4.4e-37	55.63	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013653 PE=3 SV=1	[more]

BLAST of Tan0011226.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	8.8e-22	41.74	S-protein homologue 1	[more]
AT4G29035.1	3.4e-21	40.17	Plant self-incompatibility protein S1 family	[more]
AT1G28305.1	2.0e-13	32.74	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	1.2e-10	34.94	Plant self-incompatibility protein S1 family	[more]
AT5G04347.1	2.0e-10	31.78	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 34..143 e-value: 1.5E-24 score: 86.5
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 26..135
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 26..135

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0011226	Tan0011226	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0011226.1-exon	Tan0011226.1-exon-LG06:17066405..17066842	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0011226.1-cds	Tan0011226.1-cds-LG06:17066405..17066842	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0011226.1	Tan0011226.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region