Tan0009467.1 (mRNA) Snake gourd v1

Overview


Name	Tan0009467.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Non-specific lipid-transfer protein
Location	LG08: 73861392 .. 73862676 (-)
Sequence length	876
RNA-Seq Expression	Tan0009467.1
Synteny	Tan0009467.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCTCGAGTGAGAGAGGCTCAACTACCAACAACCCCCATCGCCCATCGGGCTTGCCTCATAAATGATTCGTTGAATGGCTATAAAAACAGCAACACCCAGTACCGTTTGATCCACAGAGCTAGCGAAGGTAAATCAGTAAAGAGAGAAAAAAAGAAAGAAAGTTAAAAAAAAAAAGAGGAAATTATTAATCGAATTAGATGGAAAAGAGCATGAAGATGAAGATGATTGTGGGGATGTTGATGATGTGGATGGTTGTGGGTGAAGCGGCGATTGCCTGCGGCTCAGTGGCCAGCGCAGTGGCGCCGTGCATGGGATATTTGACAGGCCAAGTATCAGTCGTGCCCTCTGCTTGTTGCGTTGGTGTTAAGAGACTCAACGACCAAGCTACCACAACCGTCGATCGCCGCGCCGTTTGCGGCTGCTTGAAATCTGCCGCCGGTAGTATCAAAGACATCAAAACTGCCCTCGCCGCAGGCCTTCCCTCCGAATGTGGCGTCAGCATTCCTTATAAGATCAGCCCCAGCACCGACTGCAACACGTATATATTCATACCTCTCTACTCTATTTTACTTTCCTTTTTTTTATTTTTTTTTATTTCTCATCATTATTTCTCCAAAAATAGGCTGTGGTGTCTAACTTTAATTTGTTTACAGGAAAATATTTAGGTATTGATCAGGGGGCACCCATATATTTTACTTCCCCCTTGATAACTACATTTTTTTTCTTAATTTTTTTGTAAAAAAAAACTTAGGAATTAAAAGAGGGTGAACATTTAGGTGTTGATTTTTTAAACAGAAAATCTGTGGTTCAAAATTGGGCAGCACACAAACAAGATTGCACTATTTACTTACCTCTACTGGTCAAAATAATAGATCGGTGTCTTGTCTAGTATTTTTCTTATTTCTCACTTCTCTTTTTAATTTTAATTTCTTTATTTATATATGCAGAGTCAACTAGAAGATCCACCAGATCATCATCATCATCATCATCTAAATTTAGCTGCCTTAATATATTAATCCATAGCAATTAATATCTGAATAAAAAGCATGAGACGGCGCTTTGGAGATTTCTCATGCCGGGATCCGCTCTTTTGCCACTCATCAGTTTCATGTCTTCTTATTTTGGTTCGCTTCATGTTCATGCAGTGACAGTCTCTTTTTGTTCTTCTTCTTTCGTCAACTTTTGTTTTTCTTAGATTATGTAGTAGTCTGTCAGATTTCCAAATGACACGTGTCATTGCGAATTCTAATATCATATAATATATCTATTTCCTCATTTTCTCC

mRNA sequence

TCCCTCGAGTGAGAGAGGCTCAACTACCAACAACCCCCATCGCCCATCGGGCTTGCCTCATAAATGATTCGTTGAATGGCTATAAAAACAGCAACACCCAGTACCGTTTGATCCACAGAGCTAGCGAAGGTAAATCAGTAAAGAGAGAAAAAAAGAAAGAAAGTTAAAAAAAAAAAGAGGAAATTATTAATCGAATTAGATGGAAAAGAGCATGAAGATGAAGATGATTGTGGGGATGTTGATGATGTGGATGGTTGTGGGTGAAGCGGCGATTGCCTGCGGCTCAGTGGCCAGCGCAGTGGCGCCGTGCATGGGATATTTGACAGGCCAAGTATCAGTCGTGCCCTCTGCTTGTTGCGTTGGTGTTAAGAGACTCAACGACCAAGCTACCACAACCGTCGATCGCCGCGCCGTTTGCGGCTGCTTGAAATCTGCCGCCGGTAGTATCAAAGACATCAAAACTGCCCTCGCCGCAGGCCTTCCCTCCGAATGTGGCGTCAGCATTCCTTATAAGATCAGCCCCAGCACCGACTGCAACACAGTCAACTAGAAGATCCACCAGATCATCATCATCATCATCATCTAAATTTAGCTGCCTTAATATATTAATCCATAGCAATTAATATCTGAATAAAAAGCATGAGACGGCGCTTTGGAGATTTCTCATGCCGGGATCCGCTCTTTTGCCACTCATCAGTTTCATGTCTTCTTATTTTGGTTCGCTTCATGTTCATGCAGTGACAGTCTCTTTTTGTTCTTCTTCTTTCGTCAACTTTTGTTTTTCTTAGATTATGTAGTAGTCTGTCAGATTTCCAAATGACACGTGTCATTGCGAATTCTAATATCATATAATATATCTATTTCCTCATTTTCTCC

Coding sequence (CDS)

ATGGAAAAGAGCATGAAGATGAAGATGATTGTGGGGATGTTGATGATGTGGATGGTTGTGGGTGAAGCGGCGATTGCCTGCGGCTCAGTGGCCAGCGCAGTGGCGCCGTGCATGGGATATTTGACAGGCCAAGTATCAGTCGTGCCCTCTGCTTGTTGCGTTGGTGTTAAGAGACTCAACGACCAAGCTACCACAACCGTCGATCGCCGCGCCGTTTGCGGCTGCTTGAAATCTGCCGCCGGTAGTATCAAAGACATCAAAACTGCCCTCGCCGCAGGCCTTCCCTCCGAATGTGGCGTCAGCATTCCTTATAAGATCAGCCCCAGCACCGACTGCAACACAGTCAACTAG

Protein sequence

MEKSMKMKMIVGMLMMWMVVGEAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLNDQATTTVDRRAVCGCLKSAAGSIKDIKTALAAGLPSECGVSIPYKISPSTDCNTVN

Homology

[Close]

BLAST of Tan0009467.1 vs. ExPASy Swiss-Prot
Match: P19656 (Non-specific lipid-transfer protein OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-24
Identity = 56/107 (52.34%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 10  IVGMLMMWMVVGEAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLNDQATTTVDR 69
           +V ++++     EAAI+CG VASA+APC+ Y  GQ S   + CC GV+ LN+ A TT DR
Sbjct: 14  VVALVLLAAATSEAAISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADR 73

Query: 70  RAVCGCLKSAAGSIKDIKTALAAGLPSECGVSIPYKISPSTDCNTVN 117
           RA C CLK+AA  +  +    AA +PS+CGVSIPY IS STDC+ VN
Sbjct: 74  RAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN 120

[Close]

BLAST of Tan0009467.1 vs. ExPASy Swiss-Prot
Match: P27631 (Non-specific lipid-transfer protein OS=Daucus carota OX=4039 GN=EP2 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 5.6e-24
Identity = 58/111 (52.25%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 11  VGMLMMWMVV-----GEAAIACGSVASAVAPCMGYLTGQVSV-VPSACCVGVKRLNDQAT 70
           V M++M+MV+      EA + CG V  A+APC+GYL  QV+V VP  CC  V+ LN+ A 
Sbjct: 9   VAMMVMYMVLATTPNAEAVLTCGQVTGALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAAR 68

Query: 71  TTVDRRAVCGCLKSAAGSIKDIKTALAAGLPSECGVSIPYKISPSTDCNTV 116
           TT+D+R  CGCLK  A ++  +    AAGLP+ CGV+IPYKISP+TDCN V
Sbjct: 69  TTLDKRTACGCLKQTANAVTGLNLNAAAGLPARCGVNIPYKISPTTDCNRV 119

[Close]

BLAST of Tan0009467.1 vs. ExPASy Swiss-Prot
Match: P85894 (Non-specific lipid-transfer protein 1 OS=Morus nigra OX=85232 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-23
Identity = 55/91 (60.44%), Postives = 67/91 (73.63%), Query Frame = 0


Query: 25  IACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLNDQATTTVDRRAVCGCLKSAAGSIK 84
           I CG V+S++APC+ YL     VVP+ CC GV+ LN+ A TT DR+A C CLKSA  SIK
Sbjct: 1   ITCGQVSSSLAPCINYLRAG-GVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIK 60

Query: 85  DIKTALAAGLPSECGVSIPYKISPSTDCNTV 116
            +   LAAGLP +CGVS+PYKISPSTDC +V
Sbjct: 61  GLNLNLAAGLPGKCGVSVPYKISPSTDCKSV 90

[Close]

BLAST of Tan0009467.1 vs. ExPASy Swiss-Prot
Match: A0A0B4JDK1 (Non-specific lipid-transfer protein OS=Anethum graveolens OX=40922 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.1e-23
Identity = 60/113 (53.10%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 11  VGMLMMWMVVGEA-------AIACGSVASAVAPCMGYLTGQVSV-VPSACCVGVKRLNDQ 70
           V M++++MVV          A+ CG V  A+APC+GYL    SV VP  CC GV+ LN+ 
Sbjct: 9   VVMVVVYMVVAATPNVKLAEALTCGQVTGALAPCLGYLRTAGSVPVPLTCCNGVRGLNNA 68

Query: 71  ATTTVDRRAVCGCLKSAAGSIKDIKTALAAGLPSECGVSIPYKISPSTDCNTV 116
           A TT+DRR  C CLK  A +I D+    AAGLP++CGV+IPYKISPSTDCN V
Sbjct: 69  ARTTIDRRTACNCLKQTANAIADLNLNAAAGLPAKCGVNIPYKISPSTDCNRV 121

[Close]

BLAST of Tan0009467.1 vs. ExPASy Swiss-Prot
Match: A0A161AT60 (Non-specific lipid-transfer protein 1 OS=Pisum sativum OX=3888 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-22
Identity = 61/118 (51.69%), Postives = 82/118 (69.49%), Query Frame = 0


Query: 1   MEKSMKMKMIVGMLMMWMV--VGEAAIACGSVASAVAPCMGYLTGQVSV-VPSACCVGVK 60
           M +SMK+  +  ++ M ++  + EAA++CG+V++ +APC+ YL    +   P  CC GVK
Sbjct: 1   MARSMKLACVALVICMVVIAPMAEAALSCGTVSADMAPCVTYLQAPNNASPPPPCCAGVK 60

Query: 61  RLNDQATTTVDRRAVCGCLKSAAGSIKDIKTALAAGLPSECGVSIPYKISPSTDCNTV 116
           +L   ATTT DR+A C CLKSAAGSI  + T  AA LP +CGVSIPYKIS ST+CNTV
Sbjct: 61  KLLAAATTTPDRQAACNCLKSAAGSIPKLNTNNAAALPGKCGVSIPYKISTSTNCNTV 118

[Close]

BLAST of Tan0009467.1 vs. NCBI nr
Match: XP_023528122.1 (non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 145.2 bits (365), Expect = 3.5e-31
Identity = 76/116 (65.52%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 1   MEKSMKMKMIVGMLMMWMVVGEAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLN 60
           ME+SMKM +IVG+++M MVVGEAAI CG+VAS+VAPC+ YL    S VP+ACC G++ LN
Sbjct: 1   MERSMKMAIIVGVVLMCMVVGEAAITCGAVASSVAPCIPYLKNPSSGVPAACCNGIRSLN 60

Query: 61  DQATTTVDRRAVCGCLKSAAGSIKDIKTALAAGLPSECGVSIPYKISPSTDCNTVN 117
            QA+T+VDRR  C CLKSAA SI  I    A+ LPS+CGV IPYKISPSTDCN VN
Sbjct: 61  SQASTSVDRRTACTCLKSAASSIPGINFNAASSLPSQCGVRIPYKISPSTDCNKVN 116

[Close]

BLAST of Tan0009467.1 vs. NCBI nr
Match: XP_022982607.1 (non-specific lipid-transfer protein 1-like [Cucurbita maxima])

HSP 1 Score: 144.1 bits (362), Expect = 7.8e-31
Identity = 72/116 (62.07%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 1   MEKSMKMKMIVGMLMMWMVVGEAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLN 60
           ME+SMKM ++VG+++M MVVGEAAI+CG+VAS+VAPC+ YL    + +P+ACC G++ LN
Sbjct: 1   MERSMKMAIVVGVVLMCMVVGEAAISCGTVASSVAPCIPYLRNPSTGLPAACCSGIRSLN 60

Query: 61  DQATTTVDRRAVCGCLKSAAGSIKDIKTALAAGLPSECGVSIPYKISPSTDCNTVN 117
            QA+T+ DRR  C CLKSAA S+  I    A+ LPS+CGVSIPYKISPSTDCN VN
Sbjct: 61  SQASTSADRRTACNCLKSAANSVSGINYNAASSLPSKCGVSIPYKISPSTDCNKVN 116

[Close]

BLAST of Tan0009467.1 vs. NCBI nr
Match: XP_038902996.1 (non-specific lipid-transfer protein 1-like [Benincasa hispida])

HSP 1 Score: 144.1 bits (362), Expect = 7.8e-31
Identity = 74/116 (63.79%), Postives = 88/116 (75.86%), Query Frame = 0


Query: 1   MEKSMKMKMIVGMLMMWMVVGEAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLN 60
           ME+SMK+ MIVG++MM MVV EAAI+CG+VA AV PC+GYL     + P ACC GV+ L 
Sbjct: 3   MERSMKVMMIVGVVMMCMVVSEAAISCGAVAGAVGPCIGYLKAPTGIPPPACCNGVRNLK 62

Query: 61  DQATTTVDRRAVCGCLKSAAGSIKDIKTALAAGLPSECGVSIPYKISPSTDCNTVN 117
            QA+T  DRRA C CLK+AA SI+ I    AAGLPS+CGVSIPYKISP+TDC  VN
Sbjct: 63  SQASTPADRRAACYCLKNAANSIRGIDVGAAAGLPSKCGVSIPYKISPNTDCTKVN 118

[Close]

BLAST of Tan0009467.1 vs. NCBI nr
Match: KAG7017187.1 (hypothetical protein SDJN02_19049 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30
Identity = 74/116 (63.79%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 1   MEKSMKMKMIVGMLMMWMVVGEAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLN 60
           ME+SMKM +IVG+++M MVVGEAAI CG+V +++APC+ YL    S VP+ACC G++ LN
Sbjct: 1   MERSMKMAIIVGVVLMCMVVGEAAITCGAVVNSLAPCIPYLKNPSSGVPAACCNGIRSLN 60

Query: 61  DQATTTVDRRAVCGCLKSAAGSIKDIKTALAAGLPSECGVSIPYKISPSTDCNTVN 117
            QA+T+VDRRA C CLKSAA SI  I    A+ LPS+CGV IPYKISPSTDCN VN
Sbjct: 61  SQASTSVDRRAACTCLKSAANSISGINFNAASNLPSQCGVRIPYKISPSTDCNKVN 116

[Close]

BLAST of Tan0009467.1 vs. NCBI nr
Match: XP_022935125.1 (non-specific lipid-transfer protein 1-like [Cucurbita moschata])

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30
Identity = 74/116 (63.79%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 1   MEKSMKMKMIVGMLMMWMVVGEAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLN 60
           ME+SMKM +IVG+++M MVVGEAAI+CG+VA +V+PC+ YL    S VP+ACC G++ LN
Sbjct: 1   MERSMKMAIIVGVVLMCMVVGEAAISCGTVARSVSPCISYLKNPSSGVPAACCNGIRSLN 60

Query: 61  DQATTTVDRRAVCGCLKSAAGSIKDIKTALAAGLPSECGVSIPYKISPSTDCNTVN 117
            QA+T+VDRR  C CLKSAA SI  I    A+ LPS+CGVSIPYKISPSTDC+ VN
Sbjct: 61  SQASTSVDRRTACTCLKSAANSISGINFNAASSLPSKCGVSIPYKISPSTDCSKVN 116

[Close]

BLAST of Tan0009467.1 vs. ExPASy TrEMBL
Match: A0A6J1IX25 (Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111481432 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.8e-31
Identity = 72/116 (62.07%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 1   MEKSMKMKMIVGMLMMWMVVGEAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLN 60
           ME+SMKM ++VG+++M MVVGEAAI+CG+VAS+VAPC+ YL    + +P+ACC G++ LN
Sbjct: 1   MERSMKMAIVVGVVLMCMVVGEAAISCGTVASSVAPCIPYLRNPSTGLPAACCSGIRSLN 60

Query: 61  DQATTTVDRRAVCGCLKSAAGSIKDIKTALAAGLPSECGVSIPYKISPSTDCNTVN 117
            QA+T+ DRR  C CLKSAA S+  I    A+ LPS+CGVSIPYKISPSTDCN VN
Sbjct: 61  SQASTSADRRTACNCLKSAANSVSGINYNAASSLPSKCGVSIPYKISPSTDCNKVN 116

[Close]

BLAST of Tan0009467.1 vs. ExPASy TrEMBL
Match: A0A6J1F9Q5 (Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC111442087 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.4e-31
Identity = 74/116 (63.79%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 1   MEKSMKMKMIVGMLMMWMVVGEAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLN 60
           ME+SMKM +IVG+++M MVVGEAAI+CG+VA +V+PC+ YL    S VP+ACC G++ LN
Sbjct: 1   MERSMKMAIIVGVVLMCMVVGEAAISCGTVARSVSPCISYLKNPSSGVPAACCNGIRSLN 60

Query: 61  DQATTTVDRRAVCGCLKSAAGSIKDIKTALAAGLPSECGVSIPYKISPSTDCNTVN 117
            QA+T+VDRR  C CLKSAA SI  I    A+ LPS+CGVSIPYKISPSTDC+ VN
Sbjct: 61  SQASTSVDRRTACTCLKSAANSISGINFNAASSLPSKCGVSIPYKISPSTDCSKVN 116

[Close]

BLAST of Tan0009467.1 vs. ExPASy TrEMBL
Match: A0A6J1DW01 (Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC111024014 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.5e-30
Identity = 75/116 (64.66%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 1   MEKSMKMKMIVGMLMMWMVVGEAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLN 60
           ME S KM ++ GM+MMWMVVG AAI+CGSV  AVAPC+ YL     V+  ACC GVK LN
Sbjct: 1   MEMSRKMMIVAGMVMMWMVVGGAAISCGSVNGAVAPCISYLR-PGGVLSPACCSGVKNLN 60

Query: 61  DQATTTVDRRAVCGCLKSAAGSIKDIKTALAAGLPSECGVSIPYKISPSTDCNTVN 117
            QA+TT DR+AVC CLKSAAG+I+ I    AAGLP +CGVS+PYKISPSTDC+ V+
Sbjct: 61  SQASTTADRQAVCQCLKSAAGAIQGIDLGRAAGLPGKCGVSVPYKISPSTDCSKVH 115

[Close]

BLAST of Tan0009467.1 vs. ExPASy TrEMBL
Match: A0A7N0ZQT0 (Non-specific lipid-transfer protein OS=Kalanchoe fedtschenkoi OX=63787 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 4.3e-27
Identity = 63/94 (67.02%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 22  EAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLNDQATTTVDRRAVCGCLKSAAG 81
           EAA+ CG+VAS++ PC+GYL G V+ VP ACC G+K LN  A+TT DR+  C CLKSAA 
Sbjct: 29  EAAVTCGTVASSINPCLGYLKGSVAAVPGACCSGIKSLNAAASTTPDRQTACKCLKSAAS 88

Query: 82  SIKDIKTALAAGLPSECGVSIPYKISPSTDCNTV 116
           SI  I  ALAAGLP +CGVSIPYKISPSTDCN V
Sbjct: 89  SISGINLALAAGLPGKCGVSIPYKISPSTDCNQV 122

[Close]

BLAST of Tan0009467.1 vs. ExPASy TrEMBL
Match: A0A5D3DMS3 (Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00250 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.8e-26
Identity = 69/117 (58.97%), Postives = 83/117 (70.94%), Query Frame = 0


Query: 1   MEKSMKMKMIVGMLMMWMVV-GEAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRL 60
           ME  +K  MIVG++MM MVV GEAA+ CGSVA+A+ PC+ YL    + VP+ CC G++ L
Sbjct: 1   MEMKLKGLMIVGIVMMCMVVLGEAAVTCGSVATAMGPCIPYLRSPSASVPAGCCSGIRSL 60

Query: 61  NDQATTTVDRRAVCGCLKSAAGSIKDIKTALAAGLPSECGVSIPYKISPSTDCNTVN 117
           N QA TT DRR  C CLKSAA SI  I    AAGLP +CGVSI Y ISP+TDC+ VN
Sbjct: 61  NGQAATTADRRTACNCLKSAAKSISGINYKAAAGLPGKCGVSISYPISPNTDCSRVN 117

[Close]

BLAST of Tan0009467.1 vs. TAIR 10
Match: AT5G59310.1 (lipid transfer protein 4 )

HSP 1 Score: 103.6 bits (257), Expect = 1.1e-22
Identity = 53/94 (56.38%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 22  EAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLNDQATTTVDRRAVCGCLKSAAG 81
           +AAI CG+VAS+++PC+GYL+ +  VVP  CC GVK+LN  A TT DR+  C CL+SAA 
Sbjct: 22  DAAITCGTVASSLSPCLGYLS-KGGVVPPPCCAGVKKLNGMAQTTPDRQQACRCLQSAA- 81

Query: 82  SIKDIKTALAAGLPSECGVSIPYKISPSTDCNTV 116
             K +  +LA+GLP +CGVSIPY IS ST+C T+
Sbjct: 82  --KGVNPSLASGLPGKCGVSIPYPISTSTNCATI 111

[Close]

BLAST of Tan0009467.1 vs. TAIR 10
Match: AT5G59320.1 (lipid transfer protein 3 )

HSP 1 Score: 101.7 bits (252), Expect = 4.1e-22
Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 22  EAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLNDQATTTVDRRAVCGCLKSAAG 81
           +AAI+CG+VA ++APC  YL+ +  +VP +CC GVK LN  A TT DR+  C C++S A 
Sbjct: 22  DAAISCGTVAGSLAPCATYLS-KGGLVPPSCCAGVKTLNSMAKTTPDRQQACRCIQSTAK 81

Query: 82  SIKDIKTALAAGLPSECGVSIPYKISPSTDCNTV 116
           SI  +  +LA+GLP +CGVSIPY IS ST+CN +
Sbjct: 82  SISGLNPSLASGLPGKCGVSIPYPISMSTNCNNI 114

[Close]

BLAST of Tan0009467.1 vs. TAIR 10
Match: AT3G51590.1 (lipid transfer protein 12 )

HSP 1 Score: 94.4 bits (233), Expect = 6.6e-20
Identity = 50/95 (52.63%), Postives = 63/95 (66.32%), Query Frame = 0


Query: 22  EAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLNDQATTTVDRRAVCGCLKSAAG 81
           E+ I CG+V S +A C+ YLT     +PS CCVGVK L   A TT DR+ VC CLK A  
Sbjct: 23  ESTIQCGTVTSTLAQCLTYLTNS-GPLPSQCCVGVKSLYQLAQTTPDRKQVCECLKLAGK 82

Query: 82  SIKDIKTALAAGLPSECGVSIPYKISPSTDCNTVN 117
            IK + T L A LP+ CGVSIPY IS ST+C++++
Sbjct: 83  EIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSIS 116

[Close]

BLAST of Tan0009467.1 vs. TAIR 10
Match: AT2G38540.1 (lipid transfer protein 1 )

HSP 1 Score: 92.4 bits (228), Expect = 2.5e-19
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 9   MIVGMLMMWMVVGEAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLNDQATTTVD 68
           ++  M++   +   AA++CGSV S +A C+GY+  Q  V+P ACC GVK LN  A TT D
Sbjct: 11  LLACMIVAGPITSNAALSCGSVNSNLAACIGYVL-QGGVIPPACCSGVKNLNSIAKTTPD 70

Query: 69  RRAVCGCLKSAAGSI-KDIKTALAAGLPSECGVSIPYKISPSTDCNTV 116
           R+  C C++ AA ++   +    AAG+P  CGV+IPYKIS ST+C TV
Sbjct: 71  RQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTV 117

[Close]

BLAST of Tan0009467.1 vs. TAIR 10
Match: AT3G08770.1 (lipid transfer protein 6 )

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-18
Identity = 50/115 (43.48%), Postives = 76/115 (66.09%), Query Frame = 0


Query: 5   MKMKMIVGMLMMWMVVGEAAIACGSVASAVAPCMGYLTGQVSVVPSACCVGVKRLNDQAT 64
           M+  ++   L++ +  GEAA++C +V + + PC+ Y+T Q   VP+ CC G+  L  QA 
Sbjct: 1   MRSLLLAVCLVLALHCGEAAVSCNTVIADLYPCLSYVT-QGGPVPTLCCNGLTTLKSQAQ 60

Query: 65  TTVDRRAVCGCLKSAAGSI----KDIKTALAAGLPSECGVSIPYKISPSTDCNTV 116
           T+VDR+ VC C+KSA G +    + I+ AL   LPS+CGV +PYK SPSTDC+++
Sbjct: 61  TSVDRQGVCRCIKSAIGGLTLSPRTIQNALE--LPSKCGVDLPYKFSPSTDCDSI 112

The following BLAST results are available for this feature:

BLAST of Tan0009467.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19656	1.9e-24	52.34	Non-specific lipid-transfer protein OS=Zea mays OX=4577 PE=1 SV=1	[more]
P27631	5.6e-24	52.25	Non-specific lipid-transfer protein OS=Daucus carota OX=4039 GN=EP2 PE=2 SV=1	[more]
P85894	1.3e-23	60.44	Non-specific lipid-transfer protein 1 OS=Morus nigra OX=85232 PE=1 SV=1	[more]
A0A0B4JDK1	2.1e-23	53.10	Non-specific lipid-transfer protein OS=Anethum graveolens OX=40922 PE=1 SV=1	[more]
A0A161AT60	1.4e-22	51.69	Non-specific lipid-transfer protein 1 OS=Pisum sativum OX=3888 PE=1 SV=1	[more]

BLAST of Tan0009467.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023528122.1	3.5e-31	65.52	non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022982607.1	7.8e-31	62.07	non-specific lipid-transfer protein 1-like [Cucurbita maxima]	[more]
XP_038902996.1	7.8e-31	63.79	non-specific lipid-transfer protein 1-like [Benincasa hispida]	[more]
KAG7017187.1	1.3e-30	63.79	hypothetical protein SDJN02_19049 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022935125.1	1.3e-30	63.79	non-specific lipid-transfer protein 1-like [Cucurbita moschata]	[more]

BLAST of Tan0009467.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IX25	3.8e-31	62.07	Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111481432 ...	[more]
A0A6J1F9Q5	6.4e-31	63.79	Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC11144208...	[more]
A0A6J1DW01	2.5e-30	64.66	Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC1110240...	[more]
A0A7N0ZQT0	4.3e-27	67.02	Non-specific lipid-transfer protein OS=Kalanchoe fedtschenkoi OX=63787 PE=3 SV=1	[more]
A0A5D3DMS3	4.8e-26	58.97	Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Tan0009467.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59310.1	1.1e-22	56.38	lipid transfer protein 4	[more]
AT5G59320.1	4.1e-22	53.19	lipid transfer protein 3	[more]
AT3G51590.1	6.6e-20	52.63	lipid transfer protein 12	[more]
AT2G38540.1	2.5e-19	46.30	lipid transfer protein 1	[more]
AT3G08770.1	2.1e-18	43.48	lipid transfer protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 26..42 score: 48.78 coord: 47..61 score: 44.82 coord: 85..102 score: 45.98 coord: 103..114 score: 61.28 coord: 68..83 score: 55.19
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 3..113
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PROSITE	PS00597	PLANT_LTP	coord: 94..115
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 27..112 e-value: 2.2E-13 score: 60.5
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 27..112 e-value: 1.8E-9 score: 37.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 24..116 e-value: 6.1E-30 score: 105.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 24..115
None	No IPR available	PANTHER	PTHR33076:SF76	NON-SPECIFIC LIPID-TRANSFER PROTEIN 1-RELATED	coord: 3..113
None	No IPR available	CDD	cd01960	nsLTP1	coord: 25..113 e-value: 5.98659E-39 score: 123.999

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0009467	Tan0009467	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0009467.1-exon	Tan0009467.1-exon-LG08:73861392..73861727	exon
Tan0009467.1-exon	Tan0009467.1-exon-LG08:73862137..73862676	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0009467.1-three_prime_utr	Tan0009467.1-three_prime_utr-LG08:73861392..73861717	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0009467.1-cds	Tan0009467.1-cds-LG08:73861718..73861727	CDS
Tan0009467.1-cds	Tan0009467.1-cds-LG08:73862137..73862477	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0009467.1-five_prime_utr	Tan0009467.1-five_prime_utr-LG08:73862478..73862676	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0009467.1	Tan0009467.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding