Tan0009460.1 (mRNA) Snake gourd v1

Overview


Name	Tan0009460.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	S-protein homolog
Location	LG06: 16832158 .. 16832577 (+)
Sequence length	420
RNA-Seq Expression	Tan0009460.1
Synteny	Tan0009460.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAGCACTTTTCGGTTTTCATGATTGTCTTGTCGTTGGCAATGCTTGAGTCAGCAAGGGCTGCCGAGCTGAAAAAATGGCACATCCACGTTATGAATGGGCTAAGCAATAGCCAAATGTTGTTGGTGCACTGCAAGTCTAAGGACGATGATCTAGGCGAACACAATATCAGCGTTGGAACTGAATTCGATTGGACTTTTAGAGTAAACTTTTGGAACACAACGTTGTTTTGGTGTTACTTGAAAAAGCCAAATGCTCAATTTGTTTCATTTGAAGCTTTTTGGATCGAGAGCAGATCTGTTTGGCTTTTTCATAAATGCTTTGATTCTAATTGCATTTGGACAGCAAAAGATGATGGAATCTATTTGAAAGACAACATGACTAAAGTAGATGTTTTGATTCATCAATGGAAATAA

mRNA sequence

ATGGAAAAGCACTTTTCGGTTTTCATGATTGTCTTGTCGTTGGCAATGCTTGAGTCAGCAAGGGCTGCCGAGCTGAAAAAATGGCACATCCACGTTATGAATGGGCTAAGCAATAGCCAAATGTTGTTGGTGCACTGCAAGTCTAAGGACGATGATCTAGGCGAACACAATATCAGCGTTGGAACTGAATTCGATTGGACTTTTAGAGTAAACTTTTGGAACACAACGTTGTTTTGGTGTTACTTGAAAAAGCCAAATGCTCAATTTGTTTCATTTGAAGCTTTTTGGATCGAGAGCAGATCTGTTTGGCTTTTTCATAAATGCTTTGATTCTAATTGCATTTGGACAGCAAAAGATGATGGAATCTATTTGAAAGACAACATGACTAAAGTAGATGTTTTGATTCATCAATGGAAATAA

Coding sequence (CDS)

ATGGAAAAGCACTTTTCGGTTTTCATGATTGTCTTGTCGTTGGCAATGCTTGAGTCAGCAAGGGCTGCCGAGCTGAAAAAATGGCACATCCACGTTATGAATGGGCTAAGCAATAGCCAAATGTTGTTGGTGCACTGCAAGTCTAAGGACGATGATCTAGGCGAACACAATATCAGCGTTGGAACTGAATTCGATTGGACTTTTAGAGTAAACTTTTGGAACACAACGTTGTTTTGGTGTTACTTGAAAAAGCCAAATGCTCAATTTGTTTCATTTGAAGCTTTTTGGATCGAGAGCAGATCTGTTTGGCTTTTTCATAAATGCTTTGATTCTAATTGCATTTGGACAGCAAAAGATGATGGAATCTATTTGAAAGACAACATGACTAAAGTAGATGTTTTGATTCATCAATGGAAATAA

Protein sequence

MEKHFSVFMIVLSLAMLESARAAELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNISVGTEFDWTFRVNFWNTTLFWCYLKKPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDDGIYLKDNMTKVDVLIHQWK

Homology

[Close]

BLAST of Tan0009460.1 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.7e-25
Identity = 50/116 (43.10%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 24  ELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNISVGTEFDWTFRVNFWNTTLFWCYLK 83
           ++ +W + V+NGL+  + L +HCKSK+DDLGE N+     F W F  N  ++T FWCY+ 
Sbjct: 37  KISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMN 96

Query: 84  KPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDDGIYLKDNMTKVDVLIHQWK 140
           K N   ++   FW +   V LFH+C   NCIWTAK DG+YL ++ +  DVL  +W+
Sbjct: 97  KDNGH-MNVNVFWDD---VILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]

BLAST of Tan0009460.1 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.7e-24
Identity = 48/116 (41.38%), Postives = 74/116 (63.79%), Query Frame = 0


Query: 24  ELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNISVGTEFDWTFRVNFWNTTLFWCYLK 83
           ++ +W + V NGL+  + L +HCKSK++DLG+ N+     F W F  N  ++TLFWCY+ 
Sbjct: 37  KISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMS 96

Query: 84  KPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDDGIYLKDNMTKVDVLIHQWK 140
           K +   ++ + FW +   V LFH+C   NC+WTAK+DG+YL ++    DVL  +WK
Sbjct: 97  KDDGH-MNVKVFWDD---VILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Tan0009460.1 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 7.0e-13
Identity = 48/131 (36.64%), Postives = 73/131 (55.73%), Query Frame = 0


Query: 3   KHFSVFMIVLSLAMLESARAAELKKWHIHVMNGLS--NSQMLLVHCKSKDDDLGEHNISV 62
           K+ S+F+ V+ L M+        KK  I V N L+  N  +L VHCKSK++D+G   + +
Sbjct: 2   KNLSIFLFVVGLCMISDVYG---KKSTITVKNELNPKNKNILKVHCKSKNNDIGVKYLKI 61

Query: 63  GTEFDWTFRVNFWNTTLFWCYLKK--PNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAK 122
           G    ++F+ NFW TT FWC L K     ++    A+    +++ LF K   S+  W A+
Sbjct: 62  GEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRGITAY----QAIGLFAK-DGSSYNWLAR 121

Query: 123 DDGIYL-KDNM 129
           DDGIY  KD++
Sbjct: 122 DDGIYFHKDSL 124

[Close]

BLAST of Tan0009460.1 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-12
Identity = 47/138 (34.06%), Postives = 71/138 (51.45%), Query Frame = 0


Query: 5   FSVFMIVLSLAMLESARAAELK---KWHI-HVMNGLSNSQMLLVHCKSKDDDLGEHNISV 64
           F V ++V+SL   E+ +  E K   + H+  V     N  +L +HCKS+DDDLG H ++ 
Sbjct: 17  FIVSIVVISLICSEALQIQEAKEPIRGHLTRVTIQNDNDYLLGIHCKSRDDDLGFHILAK 76

Query: 65  GTEFDWTFRVNFWNTTLFWCYLKKPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDD 124
           G  F W F VNF  +TL++C   +   +   FE +    R+   F++C  +NC W A+ D
Sbjct: 77  GELFGWKFHVNFCYSTLYFCGFSQGQMKKGVFEIY----RANRDFYRC--ANCTWKAEKD 136

Query: 125 GIYLKDNMTKVDVLIHQW 139
           GIY          L + W
Sbjct: 137 GIYGYSEDPVKGYLFYNW 148

[Close]

BLAST of Tan0009460.1 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 5.9e-12
Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 0


Query: 7   VFMIVLSLAMLES----ARAAELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNISVGT 66
           +F++++SL   E+     +   +K     V+    N  +L VHCKS+DDD G H +  G 
Sbjct: 5   IFIVLISLIGCETLQHDGKVFPMKGPLTRVVIYNDNDYLLGVHCKSRDDDHGFHILQKGG 64

Query: 67  EFDWTFRVNFWNTTLFWCYLKKPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDDGI 126
            + W F VNF N+TL++C   +   +   F+ +    ++V    +C   NC W AK+DGI
Sbjct: 65  LYGWMFYVNFMNSTLYFCGFSQEQVKKGVFDIY----KAVRDSSRC--RNCTWEAKEDGI 124

Query: 127 YLKDNMTKVDVLIHQW 139
           Y    + K + L ++W
Sbjct: 125 YGYGEIPKKNPLFYKW 134

[Close]

BLAST of Tan0009460.1 vs. NCBI nr
Match: XP_038896594.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 221.9 bits (564), Expect = 3.5e-54
Identity = 98/139 (70.50%), Postives = 113/139 (81.29%), Query Frame = 0


Query: 1   MEKHFSVFMIVLSLAMLESARAAELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNISV 60
           M K   V   VL LAML+  +AAEL KW IHV+NGLSN Q+L VHCKSKD+DLGEH +SV
Sbjct: 6   MTKQCVVLFFVLCLAMLDENKAAELAKWQIHVVNGLSNGQILFVHCKSKDNDLGEHKLSV 65

Query: 61  GTEFDWTFRVNFWNTTLFWCYLKKPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDD 120
           G EF+W FRVNFWNTTLFWCYL+KPNAQ  SF+AFWIES SVWL++ C+DSNCIW AKDD
Sbjct: 66  GNEFNWRFRVNFWNTTLFWCYLQKPNAQHSSFQAFWIESTSVWLYNMCYDSNCIWIAKDD 125

Query: 121 GIYLKDNMTKVDVLIHQWK 140
           G+YLKDN    DVLIH+W+
Sbjct: 126 GVYLKDNTNHEDVLIHKWE 144

[Close]

BLAST of Tan0009460.1 vs. NCBI nr
Match: XP_022143772.1 (S-protein homolog 74-like [Momordica charantia])

HSP 1 Score: 221.1 bits (562), Expect = 6.0e-54
Identity = 93/139 (66.91%), Postives = 117/139 (84.17%), Query Frame = 0


Query: 2   EKHFSVFMIVLSLAMLESARA-AELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNISV 61
           +KHF VF++VLSL +LE   A +ELKKW IHV+NGLSN Q L VHCKSKD+DLGEHN++ 
Sbjct: 11  KKHFLVFLLVLSLVILEPIEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNS 70

Query: 62  GTEFDWTFRVNFWNTTLFWCYLKKPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDD 121
           GTEF+WTFRVN WNTTLFWCYL KP+ +  SF+ FW+E +S+WLF++C+ SNCIWTAKDD
Sbjct: 71  GTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDD 130

Query: 122 GIYLKDNMTKVDVLIHQWK 140
           GIYL+DN  + D+L+H+WK
Sbjct: 131 GIYLRDNPVQRDILVHEWK 149

[Close]

BLAST of Tan0009460.1 vs. NCBI nr
Match: XP_031745090.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 3.0e-53
Identity = 97/140 (69.29%), Postives = 114/140 (81.43%), Query Frame = 0


Query: 1   MEKHFSVFMIVLSLAMLESARAAELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNISV 60
           M+K   V + VL LA+LE  +A EL+KWHIHV+NGLSN Q+LL HCKSKD+DLGE  +  
Sbjct: 12  MKKQCVVLLFVLCLAILEETKAVELEKWHIHVVNGLSNGQILLAHCKSKDNDLGERRLIA 71

Query: 61  GTEFDWTFRVNFWNTTLFWCYLKKPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDD 120
           GTEF+W FRVNFWNTTLFWCYL+KPN Q  SFE+FWIESRSVWL+  CF+ NCIWTAKDD
Sbjct: 72  GTEFNWRFRVNFWNTTLFWCYLQKPNGQHSSFESFWIESRSVWLYTMCFEKNCIWTAKDD 131

Query: 121 GIYLKDNM-TKVDVLIHQWK 140
           GIYLKDN  T  D+LIH+W+
Sbjct: 132 GIYLKDNFDTHKDILIHKWE 151

[Close]

BLAST of Tan0009460.1 vs. NCBI nr
Match: XP_016902699.1 (PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo])

HSP 1 Score: 217.6 bits (553), Expect = 6.7e-53
Identity = 92/140 (65.71%), Postives = 117/140 (83.57%), Query Frame = 0


Query: 1   MEKHFSV--FMIVLSLAMLESARAAELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNI 60
           M+ HF V  F+ VLSLA+++  +A  L++WHIH++NGLSN Q L VHC+SKDDDLG+  +
Sbjct: 32  MKNHFLVFCFLFVLSLAIVKPTKAIGLERWHIHIVNGLSNDQNLFVHCQSKDDDLGKRYL 91

Query: 61  SVGTEFDWTFRVNFWNTTLFWCYLKKPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAK 120
           SVGTEF+WTF++NFW+TTLFWCYL+KPNA+ VSFEAFW+E +S+WLF++CF SNCIWTAK
Sbjct: 92  SVGTEFNWTFKINFWDTTLFWCYLQKPNAESVSFEAFWVERKSIWLFYRCFKSNCIWTAK 151

Query: 121 DDGIYLKDNMTKVDVLIHQW 139
           DDGIYLKDN    D L+H W
Sbjct: 152 DDGIYLKDNPANRDALVHNW 171

[Close]

BLAST of Tan0009460.1 vs. NCBI nr
Match: XP_022143780.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 209.9 bits (533), Expect = 1.4e-50
Identity = 89/136 (65.44%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 3   KHFSVFMIVLSLAMLESARAAELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNISVGT 62
           KHF VF+ V SLA++E   A  L KW IHV N LSN+QML VHCKSK+DDLGEHN+SVGT
Sbjct: 7   KHFLVFLFVSSLAIVEQIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGT 66

Query: 63  EFDWTFRVNFWNTTLFWCYLKKPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDDGI 122
           EF+W FRVN W+TTL+WCYL+KPN Q VSF+AFW+E  S+WL++KC +SNC W AKDDGI
Sbjct: 67  EFNWRFRVNIWDTTLYWCYLQKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGI 126

Query: 123 YLKDNMTKVDVLIHQW 139
           YL++N    DV +H+W
Sbjct: 127 YLRNNPDGRDVFVHKW 142

[Close]

BLAST of Tan0009460.1 vs. ExPASy TrEMBL
Match: A0A6J1CRU0 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.9e-54
Identity = 93/139 (66.91%), Postives = 117/139 (84.17%), Query Frame = 0


Query: 2   EKHFSVFMIVLSLAMLESARA-AELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNISV 61
           +KHF VF++VLSL +LE   A +ELKKW IHV+NGLSN Q L VHCKSKD+DLGEHN++ 
Sbjct: 11  KKHFLVFLLVLSLVILEPIEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEHNLNS 70

Query: 62  GTEFDWTFRVNFWNTTLFWCYLKKPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDD 121
           GTEF+WTFRVN WNTTLFWCYL KP+ +  SF+ FW+E +S+WLF++C+ SNCIWTAKDD
Sbjct: 71  GTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWTAKDD 130

Query: 122 GIYLKDNMTKVDVLIHQWK 140
           GIYL+DN  + D+L+H+WK
Sbjct: 131 GIYLRDNPVQRDILVHEWK 149

[Close]

BLAST of Tan0009460.1 vs. ExPASy TrEMBL
Match: A0A1S4E390 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.2e-53
Identity = 92/140 (65.71%), Postives = 117/140 (83.57%), Query Frame = 0


Query: 1   MEKHFSV--FMIVLSLAMLESARAAELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNI 60
           M+ HF V  F+ VLSLA+++  +A  L++WHIH++NGLSN Q L VHC+SKDDDLG+  +
Sbjct: 32  MKNHFLVFCFLFVLSLAIVKPTKAIGLERWHIHIVNGLSNDQNLFVHCQSKDDDLGKRYL 91

Query: 61  SVGTEFDWTFRVNFWNTTLFWCYLKKPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAK 120
           SVGTEF+WTF++NFW+TTLFWCYL+KPNA+ VSFEAFW+E +S+WLF++CF SNCIWTAK
Sbjct: 92  SVGTEFNWTFKINFWDTTLFWCYLQKPNAESVSFEAFWVERKSIWLFYRCFKSNCIWTAK 151

Query: 121 DDGIYLKDNMTKVDVLIHQW 139
           DDGIYLKDN    D L+H W
Sbjct: 152 DDGIYLKDNPANRDALVHNW 171

[Close]

BLAST of Tan0009460.1 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.7e-51
Identity = 89/136 (65.44%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 3   KHFSVFMIVLSLAMLESARAAELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNISVGT 62
           KHF VF+ V SLA++E   A  L KW IHV N LSN+QML VHCKSK+DDLGEHN+SVGT
Sbjct: 7   KHFLVFLFVSSLAIVEQIEAVPLSKWQIHVRNELSNTQMLFVHCKSKNDDLGEHNLSVGT 66

Query: 63  EFDWTFRVNFWNTTLFWCYLKKPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDDGI 122
           EF+W FRVN W+TTL+WCYL+KPN Q VSF+AFW+E  S+WL++KC +SNC W AKDDGI
Sbjct: 67  EFNWRFRVNIWDTTLYWCYLQKPNGQSVSFDAFWVEKDSIWLYYKCLESNCTWKAKDDGI 126

Query: 123 YLKDNMTKVDVLIHQW 139
           YL++N    DV +H+W
Sbjct: 127 YLRNNPDGRDVFVHKW 142

[Close]

BLAST of Tan0009460.1 vs. ExPASy TrEMBL
Match: A0A6J1CQH6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 4.4e-50
Identity = 85/139 (61.15%), Postives = 116/139 (83.45%), Query Frame = 0


Query: 1   MEKHFSVFMIVLSLAMLESARAAELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNISV 60
           ++KHF V ++ LSLA++E   + ELK+W+IHV+NGL N ++L VHCKS+DDDLGE N+  
Sbjct: 6   LKKHFLVVLLFLSLAIVEPDTSIELKRWNIHVVNGLGNGRLLFVHCKSRDDDLGEQNLYD 65

Query: 61  GTEFDWTFRVNFWNTTLFWCYLKKPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDD 120
           G EF WTFRVN  +TTLFWC+L+KP+AQ VSF+AFW+E  S+WLF++C+D+NCIWTAKDD
Sbjct: 66  GAEFSWTFRVNVIDTTLFWCFLRKPDAQSVSFDAFWVEKTSIWLFYRCYDANCIWTAKDD 125

Query: 121 GIYLKDNMTKVDVLIHQWK 140
           G+YL+DN  + DVL+H+W+
Sbjct: 126 GVYLRDNPVQRDVLVHKWQ 144

[Close]

BLAST of Tan0009460.1 vs. ExPASy TrEMBL
Match: A0A6J1CPC6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013506 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40
Identity = 82/129 (63.57%), Postives = 96/129 (74.42%), Query Frame = 0


Query: 11  VLSLAMLESARAAELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHN-ISVGTEFDWTFR 70
           VL L    S  +A L KWHIHV+NGLS    L VHCKSKDDDLG HN ++ G EF WTF+
Sbjct: 21  VLQLGTAASLSSALLPKWHIHVVNGLS-KVTLFVHCKSKDDDLGVHNLVTRGDEFQWTFQ 80

Query: 71  VNFWNTTLFWCYLKKPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDDGIYLKDNMT 130
           VNFW TTL+WCYLKKPNA  VSFE+FW+E   +WL ++C D NCIWTAKDDGIYL++N  
Sbjct: 81  VNFWATTLYWCYLKKPNAD-VSFESFWVEQTHMWLQYRCTDKNCIWTAKDDGIYLRNNPD 140

Query: 131 KVDVLIHQW 139
            VD  IH+W
Sbjct: 141 GVDERIHEW 147

[Close]

BLAST of Tan0009460.1 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 115.5 bits (288), Expect = 3.3e-26
Identity = 50/116 (43.10%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 24  ELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNISVGTEFDWTFRVNFWNTTLFWCYLK 83
           ++ +W + V+NGL+  + L +HCKSK+DDLGE N+     F W F  N  ++T FWCY+ 
Sbjct: 37  KISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMN 96

Query: 84  KPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDDGIYLKDNMTKVDVLIHQWK 140
           K N   ++   FW +   V LFH+C   NCIWTAK DG+YL ++ +  DVL  +W+
Sbjct: 97  KDNGH-MNVNVFWDD---VILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]

BLAST of Tan0009460.1 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 111.7 bits (278), Expect = 4.8e-25
Identity = 48/116 (41.38%), Postives = 74/116 (63.79%), Query Frame = 0


Query: 24  ELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNISVGTEFDWTFRVNFWNTTLFWCYLK 83
           ++ +W + V NGL+  + L +HCKSK++DLG+ N+     F W F  N  ++TLFWCY+ 
Sbjct: 37  KISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMS 96

Query: 84  KPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDDGIYLKDNMTKVDVLIHQWK 140
           K +   ++ + FW +   V LFH+C   NC+WTAK+DG+YL ++    DVL  +WK
Sbjct: 97  KDDGH-MNVKVFWDD---VILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWK 148

[Close]

BLAST of Tan0009460.1 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-17
Identity = 43/126 (34.13%), Postives = 70/126 (55.56%), Query Frame = 0


Query: 7   VFMIVLSLAMLESARAAELKKWHIHVMNGLSNSQMLLVHCKSKDDDLGEHNISVGTEFDW 66
           +F IV+ L +  S    E+ +  + + N L +S++L VHC+SKDDDLGEH + +G ++++
Sbjct: 6   IFSIVIGLCIGVSNAFHEIGESKVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEF 65

Query: 67  TFRVNFWNTTLFWCYLK-----KPNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAKDDG 126
           TF  N W TT F C +      K +  FV++E  W          K  +++C W  ++DG
Sbjct: 66  TFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETSW---------SKALEASCKWIGREDG 122

Query: 127 IYLKDN 128
           IY   +
Sbjct: 126 IYFSQD 122

[Close]

BLAST of Tan0009460.1 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 75.1 bits (183), Expect = 5.0e-14
Identity = 48/131 (36.64%), Postives = 73/131 (55.73%), Query Frame = 0


Query: 3   KHFSVFMIVLSLAMLESARAAELKKWHIHVMNGLS--NSQMLLVHCKSKDDDLGEHNISV 62
           K+ S+F+ V+ L M+        KK  I V N L+  N  +L VHCKSK++D+G   + +
Sbjct: 2   KNLSIFLFVVGLCMISDVYG---KKSTITVKNELNPKNKNILKVHCKSKNNDIGVKYLKI 61

Query: 63  GTEFDWTFRVNFWNTTLFWCYLKK--PNAQFVSFEAFWIESRSVWLFHKCFDSNCIWTAK 122
           G    ++F+ NFW TT FWC L K     ++    A+    +++ LF K   S+  W A+
Sbjct: 62  GEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRGITAY----QAIGLFAK-DGSSYNWLAR 121

Query: 123 DDGIYL-KDNM 129
           DDGIY  KD++
Sbjct: 122 DDGIYFHKDSL 124

[Close]

BLAST of Tan0009460.1 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12
Identity = 36/102 (35.29%), Postives = 52/102 (50.98%), Query Frame = 0


Query: 37  SNSQMLLVHCKSKDDDLGEHNISVGTEFDWTFRVNFWNTTLFWCYLKKPNAQFVSFEAFW 96
           +N  +L +HCKSKDDDLG H    G  + W F VNF N+TL++C   +       F+   
Sbjct: 54  NNDYLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDI-- 113

Query: 97  IESRSVWLFHKCFDSNCIWTAKDDGIYLKDNMTKVDVLIHQW 139
              R+   F++C   NC W AK D +Y   N+ +      +W
Sbjct: 114 --DRAERDFYRC--RNCTWNAKKDSLYGYSNLPQTVTWFFKW 149

The following BLAST results are available for this feature:

BLAST of Tan0009460.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	4.7e-25	43.10	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	6.7e-24	41.38	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
Q9LW22	7.0e-13	36.64	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
P0DN92	1.6e-12	34.06	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
F2Q9V4	5.9e-12	31.62	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]

BLAST of Tan0009460.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896594.1	3.5e-54	70.50	S-protein homolog 1-like [Benincasa hispida]	[more]
XP_022143772.1	6.0e-54	66.91	S-protein homolog 74-like [Momordica charantia]	[more]
XP_031745090.1	3.0e-53	69.29	S-protein homolog 1-like [Cucumis sativus]	[more]
XP_016902699.1	6.7e-53	65.71	PREDICTED: uncharacterized protein LOC107991826 [Cucumis melo]	[more]
XP_022143780.1	1.4e-50	65.44	S-protein homolog 1-like [Momordica charantia]	[more]

BLAST of Tan0009460.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRU0	2.9e-54	66.91	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1	[more]
A0A1S4E390	3.2e-53	65.71	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC107991826 PE=3 SV=1	[more]
A0A6J1CPR8	6.7e-51	65.44	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1	[more]
A0A6J1CQH6	4.4e-50	61.15	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013643 PE=3 SV=1	[more]
A0A6J1CPC6	1.1e-40	63.57	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013506 PE=3 SV=1	[more]

BLAST of Tan0009460.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	3.3e-26	43.10	S-protein homologue 1	[more]
AT4G29035.1	4.8e-25	41.38	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	4.8e-17	34.13	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	5.0e-14	36.64	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	1.2e-12	35.29	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 29..138 e-value: 5.1E-27 score: 94.4
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 8..138
None	No IPR available	PANTHER	PTHR31232:SF99	SUBFAMILY NOT NAMED	coord: 8..138

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0009460	Tan0009460	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0009460.1-exon	Tan0009460.1-exon-LG06:16832158..16832577	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0009460.1-cds	Tan0009460.1-cds-LG06:16832158..16832577	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0009460.1	Tan0009460.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane