Tan0008895.1 (mRNA) Snake gourd v1

Overview


Name	Tan0008895.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	high mobility group B protein 6-like
Location	LG01: 10883624 .. 10886270 (-)
Sequence length	1805
RNA-Seq Expression	Tan0008895.1
Synteny	Tan0008895.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCAAACCCTCTCTTTCTTCTCCAATTCAATGGCCGATTCCGCCACTGCTGAAATTCCCATCACCGGCGAACCCGCCGGACGGGCAAAGAAACCGAGAAACAGCCGGAAGGCTCTCAAGGACAAAAACTCGTCACCGGAGGGGCCTCAATCTCAACCCATGGTTACGAAGGCATCGCAGCCGTCGGAAGAGGAGGTCCTCTCTCAGAATCAATCATCAGCTAAGAAACCAAAATCGAAAGCTGCGTCGAAGAAGCAGCCAGGGAAGCAGTCCTTCGACAAAGATTTGCAGGAAATGCAGGACATGCTTCAGCAATTGAAGCTCGATAAGGAGAAGACTGAGGAACTCTTGAAAACCAAAGATGAGATGCTTAAGCAGAAGGATGAAGAGCTTAAGACGAGAGATAAAGAACAGGAGAAGCTCCAGAACGAATTGAAGAAGTTGCAGAAATTGAAGGAGTTCAAACCTAATATGGTTCGTTTCTTGATCTTGTTTTGTCTTTGTTTACTGAGAAGAAATGAACAAGAAATTTTTACTTTTCTGTTCGACATAGCTGGAATTAATTAGTATATCGGAAAGGAATCTTCAGATCTGGTTTGGTTTTCATTTCTGATTGTTGAAAATTTTTTCATTCTTAACCAGAACTTCCCTATGATTCAAATTTTGAAAGACAAGGAGCAAGAGAAGAAAGAGAAGAAGAAGTGTGCGGAAAAGAAGAGGCCCTCTCCACCTTACATTTTGTGGTGCACAGATCAGTGGAACGAGGTAGATTATACAGTTGATAATTCTTGATTATGATGACTGATTAAATAATTACTCTTGAAATTTACATTTGCGGCTTGTGTCCTCTGATGCAGATCAAGAAGGAGAATCCAGAGGCGGAGTTCAAAGAAATCTCAAACATTTTGGGCGCAAAATGGAAGGGTGTTACTGCAGAGGAGAAGAAGCCATATGAGGAGAGGTATCAGGCTGAAAAAGAAGCCTATTTGCAGATCACTTCTAAAGAGAAGCGTGAGACTGAGGCAATGAAGCTCTTAGAAGAGGAGCAGAAGCAGAAGACAGCCATGGAGTTGCTTGATCAATACCTCCAGTTCAAAGAGGAAGCAGAGAAGGAGAACAAGAAGAAGAAGTAAGTAGTACCATTTTTATCTCTTTTCTCTCTGTGAAAGTGCTTTGTTAATGAATGCTTGATAAAATGTCTCTCAGGAAAGAGAGAGATCCATTGAAGCCCAAGCAACCCATGTCCGCGTTTTTCCTCTTCTCAAATGAGAGGCGTGCATCCCTTTTTGCTGAGAACAAGAATGTCATAGAGGTTTGATTAACAACTTGCTTTCAATTCTCGAATTGGGATTTCTCTGTGTTTGTGATATTCTATTTGCATTTGCTTTTACTGTCCAATTTGTAACTGTCCACTGCTTTTTTCCATTCAGGTAGCGAAGATAACAGGAGAGGAGTGGAAGAACATGACAGAGGAGCAGAGAGGTCCTTATGAAGAGGTCAGCATTCATCAAAATTTAAGACCAAAAACAGATCTTCTTAATATTTCAACCTATGGATCGATATTTACTAGAACATATGCAGATGGCGAAGAAGAACAAGGAAAAATACATGCAGGAGATGGAAATTTACAAGCAGAAAAAAGAGGAGGAAGCAGCAATCCTCAAGAAGGAAGAGGAAGAGCAAATGAAGCTTCAGAAACATGAAGCATTACTGTTACTGAAGAAGAAAGAGAAAACTGAGACTATTATAAAGGTAAAAGATTGCCTTTATCTGTCAAATCTAAACAGCGCCACAATATTTAGGCTAGTCATTGATATGAGTTTTCTGTCATGTGTAATGACAAACAATAAACAGAAAACGAAGGAGGAGCGCCAAAAGAAGAAGAAGGAAGGGAAGAAGCTTGTTGATCCTAACAAGCCAAAGAAGCCTGCATCCTCTTACATCTTGTTCAGGTTGGACAAAAACAAAACACCCTATAATTACAGAAGAATTCCTTTTATAGAGAAACTTGTTACTGAACTTGTTTCTTGTGTTGATTGCAGCAAAGAAGCAAGGAAAAGTGTAATGGAGGAGAGGCCTGGAGTAAACAATTCCACAGTCAGTGCACTGATATCTGTGAAATGGAAGGTTTGGATTTACTGAACTTGTTTCTATTAGGTACTGTAAGAACATTTTGGAATTCTTGGTTGGTGGCTGATAAATGGTCTGGTTTTCTTCTTTAATTTGGGGTTGAATAGGAACTAAGTGAAGGGGAGAGAAAAATCTGGAATGACAAGGCTGCAGAAGCCATGGAAGCTTACAAAAAGGAAGTGGAGGAATACAACAAAACTGTTGCTGAAATGAAGGGTGAGGAGAAAGCCTGAAGAGAAGGAATTAGGAAAATGTTTCACTGTTCAAGTGTTATTTGAACAGTCCCTTAACAATGACTGAGTTTTGATTAGTTGCTGCTAATCTTGTTTTGTTTCTCTAATTGATTTCTTCTTCTAGCTGCTGTTGGATTGTAATTGGTATAATTTCACAGTGTTAGATTTCTCAGAAGGCTTTGTGTAAGAATGTATAACTGAAATTGGTATTTTGTGTTCTATCATCATTTACAGTGAGAAAGTTCTGTTTGGATTTATGATGACTGAAGAAGTCGTCATCATTG

mRNA sequence

CTTCAAACCCTCTCTTTCTTCTCCAATTCAATGGCCGATTCCGCCACTGCTGAAATTCCCATCACCGGCGAACCCGCCGGACGGGCAAAGAAACCGAGAAACAGCCGGAAGGCTCTCAAGGACAAAAACTCGTCACCGGAGGGGCCTCAATCTCAACCCATGGTTACGAAGGCATCGCAGCCGTCGGAAGAGGAGGTCCTCTCTCAGAATCAATCATCAGCTAAGAAACCAAAATCGAAAGCTGCGTCGAAGAAGCAGCCAGGGAAGCAGTCCTTCGACAAAGATTTGCAGGAAATGCAGGACATGCTTCAGCAATTGAAGCTCGATAAGGAGAAGACTGAGGAACTCTTGAAAACCAAAGATGAGATGCTTAAGCAGAAGGATGAAGAGCTTAAGACGAGAGATAAAGAACAGGAGAAGCTCCAGAACGAATTGAAGAAGTTGCAGAAATTGAAGGAGTTCAAACCTAATATGAACTTCCCTATGATTCAAATTTTGAAAGACAAGGAGCAAGAGAAGAAAGAGAAGAAGAAGTGTGCGGAAAAGAAGAGGCCCTCTCCACCTTACATTTTGTGGTGCACAGATCAGTGGAACGAGATCAAGAAGGAGAATCCAGAGGCGGAGTTCAAAGAAATCTCAAACATTTTGGGCGCAAAATGGAAGGGTGTTACTGCAGAGGAGAAGAAGCCATATGAGGAGAGGTATCAGGCTGAAAAAGAAGCCTATTTGCAGATCACTTCTAAAGAGAAGCGTGAGACTGAGGCAATGAAGCTCTTAGAAGAGGAGCAGAAGCAGAAGACAGCCATGGAGTTGCTTGATCAATACCTCCAGTTCAAAGAGGAAGCAGAGAAGGAGAACAAGAAGAAGAAGAAAGAGAGAGATCCATTGAAGCCCAAGCAACCCATGTCCGCGTTTTTCCTCTTCTCAAATGAGAGGCGTGCATCCCTTTTTGCTGAGAACAAGAATGTCATAGAGGTAGCGAAGATAACAGGAGAGGAGTGGAAGAACATGACAGAGGAGCAGAGAGGTCCTTATGAAGAGATGGCGAAGAAGAACAAGGAAAAATACATGCAGGAGATGGAAATTTACAAGCAGAAAAAAGAGGAGGAAGCAGCAATCCTCAAGAAGGAAGAGGAAGAGCAAATGAAGCTTCAGAAACATGAAGCATTACTGTTACTGAAGAAGAAAGAGAAAACTGAGACTATTATAAAGAAAACGAAGGAGGAGCGCCAAAAGAAGAAGAAGGAAGGGAAGAAGCTTGTTGATCCTAACAAGCCAAAGAAGCCTGCATCCTCTTACATCTTGTTCAGCAAAGAAGCAAGGAAAAGTGTAATGGAGGAGAGGCCTGGAGTAAACAATTCCACAGTCAGTGCACTGATATCTGTGAAATGGAAGGAACTAAGTGAAGGGGAGAGAAAAATCTGGAATGACAAGGCTGCAGAAGCCATGGAAGCTTACAAAAAGGAAGTGGAGGAATACAACAAAACTGTTGCTGAAATGAAGGGTGAGGAGAAAGCCTGAAGAGAAGGAATTAGGAAAATGTTTCACTGTTCAAGTGTTATTTGAACAGTCCCTTAACAATGACTGAGTTTTGATTAGTTGCTGCTAATCTTGTTTTGTTTCTCTAATTGATTTCTTCTTCTAGCTGCTGTTGGATTGTAATTGGTATAATTTCACAGTGTTAGATTTCTCAGAAGGCTTTGTGTAAGAATGTATAACTGAAATTGGTATTTTGTGTTCTATCATCATTTACAGTGAGAAAGTTCTGTTTGGATTTATGATGACTGAAGAAGTCGTCATCATTG

Coding sequence (CDS)

ATGGCCGATTCCGCCACTGCTGAAATTCCCATCACCGGCGAACCCGCCGGACGGGCAAAGAAACCGAGAAACAGCCGGAAGGCTCTCAAGGACAAAAACTCGTCACCGGAGGGGCCTCAATCTCAACCCATGGTTACGAAGGCATCGCAGCCGTCGGAAGAGGAGGTCCTCTCTCAGAATCAATCATCAGCTAAGAAACCAAAATCGAAAGCTGCGTCGAAGAAGCAGCCAGGGAAGCAGTCCTTCGACAAAGATTTGCAGGAAATGCAGGACATGCTTCAGCAATTGAAGCTCGATAAGGAGAAGACTGAGGAACTCTTGAAAACCAAAGATGAGATGCTTAAGCAGAAGGATGAAGAGCTTAAGACGAGAGATAAAGAACAGGAGAAGCTCCAGAACGAATTGAAGAAGTTGCAGAAATTGAAGGAGTTCAAACCTAATATGAACTTCCCTATGATTCAAATTTTGAAAGACAAGGAGCAAGAGAAGAAAGAGAAGAAGAAGTGTGCGGAAAAGAAGAGGCCCTCTCCACCTTACATTTTGTGGTGCACAGATCAGTGGAACGAGATCAAGAAGGAGAATCCAGAGGCGGAGTTCAAAGAAATCTCAAACATTTTGGGCGCAAAATGGAAGGGTGTTACTGCAGAGGAGAAGAAGCCATATGAGGAGAGGTATCAGGCTGAAAAAGAAGCCTATTTGCAGATCACTTCTAAAGAGAAGCGTGAGACTGAGGCAATGAAGCTCTTAGAAGAGGAGCAGAAGCAGAAGACAGCCATGGAGTTGCTTGATCAATACCTCCAGTTCAAAGAGGAAGCAGAGAAGGAGAACAAGAAGAAGAAGAAAGAGAGAGATCCATTGAAGCCCAAGCAACCCATGTCCGCGTTTTTCCTCTTCTCAAATGAGAGGCGTGCATCCCTTTTTGCTGAGAACAAGAATGTCATAGAGGTAGCGAAGATAACAGGAGAGGAGTGGAAGAACATGACAGAGGAGCAGAGAGGTCCTTATGAAGAGATGGCGAAGAAGAACAAGGAAAAATACATGCAGGAGATGGAAATTTACAAGCAGAAAAAAGAGGAGGAAGCAGCAATCCTCAAGAAGGAAGAGGAAGAGCAAATGAAGCTTCAGAAACATGAAGCATTACTGTTACTGAAGAAGAAAGAGAAAACTGAGACTATTATAAAGAAAACGAAGGAGGAGCGCCAAAAGAAGAAGAAGGAAGGGAAGAAGCTTGTTGATCCTAACAAGCCAAAGAAGCCTGCATCCTCTTACATCTTGTTCAGCAAAGAAGCAAGGAAAAGTGTAATGGAGGAGAGGCCTGGAGTAAACAATTCCACAGTCAGTGCACTGATATCTGTGAAATGGAAGGAACTAAGTGAAGGGGAGAGAAAAATCTGGAATGACAAGGCTGCAGAAGCCATGGAAGCTTACAAAAAGGAAGTGGAGGAATACAACAAAACTGTTGCTGAAATGAAGGGTGAGGAGAAAGCCTGA

Protein sequence

MADSATAEIPITGEPAGRAKKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQNQSSAKKPKSKAASKKQPGKQSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEELKTRDKEQEKLQNELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCAEKKRPSPPYILWCTDQWNEIKKENPEAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEKRETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKENKKKKKERDPLKPKQPMSAFFLFSNERRASLFAENKNVIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEEAAILKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPASSYILFSKEARKSVMEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEVEEYNKTVAEMKGEEKA

Homology

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BLAST of Tan0008895.1 vs. ExPASy Swiss-Prot
Match: Q9T012 (High mobility group B protein 13 OS=Arabidopsis thaliana OX=3702 GN=HMGB13 PE=2 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 7.0e-140
Identity = 304/480 (63.33%), Postives = 364/480 (75.83%), Query Frame = 0


Query: 11  ITGEPAGRAKKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQNQSSAKKPKSK 70
           ++ +PA  AKK RNSRKALK KN   E                               S 
Sbjct: 4   VSSDPA-HAKKSRNSRKALKQKNEIVE-------------------------------SS 63

Query: 71  AASKKQPGKQSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEELKTRDKEQEK 130
             S K    +SF+KDL EMQ ML+++K++KEKTE+LLK KDE+L++K       + EQEK
Sbjct: 64  PVSDKGKETKSFEKDLMEMQAMLEKMKIEKEKTEDLLKEKDEILRKK-------EVEQEK 123

Query: 131 LQNELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKK---CAEKKRPSPPYILWCTDQW 190
           L+ ELKKLQK+KEFKPNM F   Q L   E+EKK KKK   CAE KRPS PYILWC D W
Sbjct: 124 LKTELKKLQKMKEFKPNMTFAFSQSLAQTEEEKKGKKKKKDCAETKRPSTPYILWCKDNW 183

Query: 191 NEIKKENPEAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEKRETEAMK 250
           NE+KK+NPEA+FKE SNILGAKWKG++AEEKKPYEE+YQA+KEAYLQ+ +KEKRE EAMK
Sbjct: 184 NEVKKQNPEADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAYLQVITKEKREREAMK 243

Query: 251 LLEEEQKQKTAMELLDQYLQFKEEAEKENKKK-KKERDPLKPKQPMSAFFLFSNERRASL 310
           LL++EQKQKTAMELLDQYL F +EAE +NKKK KK +DPLKPKQP+SA+ +++NERRA+L
Sbjct: 244 LLDDEQKQKTAMELLDQYLHFVQEAEHDNKKKAKKIKDPLKPKQPISAYLIYANERRAAL 303

Query: 311 FAENKNVIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEEAAILKK 370
             ENK+VIEVAK+ GEEWKN++EE++ PY++MAKKNKE Y+QEME YK+ KEEEA   KK
Sbjct: 304 KGENKSVIEVAKMAGEEWKNLSEEKKAPYDQMAKKNKEIYLQEMEGYKRTKEEEAMSQKK 363

Query: 371 EEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPASSYILF 430
           EEEE MKL K EAL LLKKKEKT+ IIKKTKE  + KKK   + VDPNKPKKP SSY LF
Sbjct: 364 EEEEFMKLHKQEALQLLKKKEKTDNIIKKTKETAKNKKK--NENVDPNKPKKPTSSYFLF 423

Query: 431 SKEARKSVMEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEVEEYNKT 487
            K+ARKSV+EE PG+NNSTV+A IS+KW EL E E++++N KAAE MEAYKKEVEEYNKT
Sbjct: 424 CKDARKSVLEEHPGINNSTVTAHISLKWMELGEEEKQVYNSKAAELMEAYKKEVEEYNKT 442

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BLAST of Tan0008895.1 vs. ExPASy Swiss-Prot
Match: Q9SUP7 (High mobility group B protein 6 OS=Arabidopsis thaliana OX=3702 GN=HMGB6 PE=2 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 1.7e-138
Identity = 299/474 (63.08%), Postives = 366/474 (77.22%), Query Frame = 0


Query: 20  KKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQNQSSAKKPKSKAASKKQPGK 79
           KKPRNSRKALK KN   E P S   V                      K K+A       
Sbjct: 11  KKPRNSRKALKQKNELVETPPSPVSV----------------------KGKSA------- 70

Query: 80  QSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEELKTRDKEQEKLQNELKKLQ 139
           +SF++DL EMQ ML+++K++K+KTEELLK KDE+L++K+EEL+TRD EQEKL+ ELKKLQ
Sbjct: 71  KSFEQDLMEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEELETRDAEQEKLKVELKKLQ 130

Query: 140 KLKEFKPNMNFPMIQ-ILKDKEQE---KKEKKKCAEKKRPSPPYILWCTDQWNEIKKENP 199
           K+KEFKPNM F   Q  L   EQE   KK+KK C E KRPS  Y+LWC DQW E+KKENP
Sbjct: 131 KMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPSSSYVLWCKDQWTEVKKENP 190

Query: 200 EAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEKRETEAMKLLEEEQKQ 259
           EA+FKE SNILGAKWK ++AE+KKPYEERYQ EKEAYLQ+ +KEKRE EAMKLLE++QKQ
Sbjct: 191 EADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEAYLQVIAKEKREKEAMKLLEDDQKQ 250

Query: 260 KTAMELLDQYLQFKEEAEKENKKK-KKERDPLKPKQPMSAFFLFSNERRASLFAENKNVI 319
           +TAMELLDQYL F +EAE++NKKK KKE+DPLKPK P+SAF +++NERRA+L  ENK+V+
Sbjct: 251 RTAMELLDQYLNFVQEAEQDNKKKNKKEKDPLKPKHPVSAFLVYANERRAALREENKSVV 310

Query: 320 EVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEEAAILKKEEEEQMKL 379
           EVAKITGEEWKN++++++ PYE++AKKNKE Y+Q ME YK+ KEEEA   KKEEEE +KL
Sbjct: 311 EVAKITGEEWKNLSDKKKAPYEKVAKKNKETYLQAMEEYKRTKEEEALSQKKEEEELLKL 370

Query: 380 QKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPASSYILFSKEARKSV 439
            K EAL +LKKKEKT+ +IKK K  ++KK +     VDPNKPKKPASSY LFSK+ RK +
Sbjct: 371 HKQEALQMLKKKEKTDNLIKKEKATKKKKNEN----VDPNKPKKPASSYFLFSKDERKKL 430

Query: 440 MEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEVEEYNKTVA 489
            EERPG NN+TV+ALIS+KWKELSE E++++N KAA+ MEAYKKEVE YNK  A
Sbjct: 431 TEERPGTNNATVTALISLKWKELSEEEKQVYNGKAAKLMEAYKKEVEAYNKKSA 451

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BLAST of Tan0008895.1 vs. ExPASy Swiss-Prot
Match: P40618 (High mobility group protein B3 OS=Gallus gallus OX=9031 GN=HMGB3 PE=2 SV=3)

HSP 1 Score: 75.9 bits (185), Expect = 1.5e-12
Identity = 59/204 (28.92%), Postives = 88/204 (43.14%), Query Frame = 0


Query: 284 DPLKPKQPMSAFFLFSNERRASLFAENK----NVIEVAKITGEEWKNMTEEQRGPYEEMA 343
           DP KPK  MSA+  F    R     +N     N  E +K   E WK M+ +++  ++EMA
Sbjct: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKAKFDEMA 64

Query: 344 KKNKEKYMQEMEIYKQKKEEEAAILKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEE 403
           K +K +Y +EM+ Y                                              
Sbjct: 65  KADKVRYDREMKDY---------------------------------------------- 124

Query: 404 RQKKKKEGKKLVDPNKPKKPASSYILFSKEARKSVMEERPGVNNSTVSALISVKWKELSE 463
                K GKK  DPN PK+P S + LF  E R  +    PG++   V+  +   W  LS+
Sbjct: 125 --GPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSD 160

Query: 464 GERKIWNDKAAEAMEAYKKEVEEY 484
           GE++ +N+KAA+  E Y+K+V +Y
Sbjct: 185 GEKQPYNNKAAKLKEKYEKDVADY 160

[Close]

BLAST of Tan0008895.1 vs. ExPASy Swiss-Prot
Match: Q32L31 (High mobility group protein B3 OS=Bos taurus OX=9913 GN=HMGB3 PE=2 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 1.4e-10
Identity = 57/204 (27.94%), Postives = 86/204 (42.16%), Query Frame = 0


Query: 284 DPLKPKQPMSAFFLFSNERRASLFAENK----NVIEVAKITGEEWKNMTEEQRGPYEEMA 343
           DP KPK  MSA+  F    R     +N     N  E +K   E WK M+ +++  ++EMA
Sbjct: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKFDEMA 64

Query: 344 KKNKEKYMQEMEIYKQKKEEEAAILKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEE 403
           K +K +Y +EM+ Y                                              
Sbjct: 65  KADKVRYDREMKDY---------------------------------------------- 124

Query: 404 RQKKKKEGKKLVDPNKPKKPASSYILFSKEARKSVMEERPGVNNSTVSALISVKWKELSE 463
                K GKK  DPN PK+P S + LF  E R  +    PG++   V+  +   W  LS+
Sbjct: 125 --GPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSD 160

Query: 464 GERKIWNDKAAEAMEAYKKEVEEY 484
            E++ + +KAA+  E Y+K+V +Y
Sbjct: 185 SEKQPYINKAAKLKEKYEKDVADY 160

[Close]

BLAST of Tan0008895.1 vs. ExPASy Swiss-Prot
Match: O54879 (High mobility group protein B3 OS=Mus musculus OX=10090 GN=Hmgb3 PE=1 SV=3)

HSP 1 Score: 69.3 bits (168), Expect = 1.4e-10
Identity = 57/204 (27.94%), Postives = 85/204 (41.67%), Query Frame = 0


Query: 284 DPLKPKQPMSAFFLFSNERRASLFAENK----NVIEVAKITGEEWKNMTEEQRGPYEEMA 343
           DP KPK  MSA+  F    R     +N     N  E +K   E WK M+ +++  ++EMA
Sbjct: 5   DPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKFDEMA 64

Query: 344 KKNKEKYMQEMEIYKQKKEEEAAILKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEE 403
           K +K +Y +EM+ Y                                              
Sbjct: 65  KADKVRYDREMKDY---------------------------------------------- 124

Query: 404 RQKKKKEGKKLVDPNKPKKPASSYILFSKEARKSVMEERPGVNNSTVSALISVKWKELSE 463
                K GKK  DPN PK+P S + LF  E R  +    PG++   V+  +   W  LS+
Sbjct: 125 --GPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSD 160

Query: 464 GERKIWNDKAAEAMEAYKKEVEEY 484
            E++ +  KAA+  E Y+K+V +Y
Sbjct: 185 NEKQPYVTKAAKLKEKYEKDVADY 160

[Close]

BLAST of Tan0008895.1 vs. NCBI nr
Match: XP_022942886.1 (high mobility group B protein 6-like [Cucurbita moschata])

HSP 1 Score: 793.5 bits (2048), Expect = 1.0e-225
Identity = 455/496 (91.73%), Postives = 466/496 (93.95%), Query Frame = 0


Query: 1   MADSATAEIPITGEPAGRAKKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQN 60
           MA SATAE+ +TGEP GR KKPRNSRKALKDKNSSPE  +SQ MVTK +QPSEEE LSQN
Sbjct: 1   MASSATAEVLVTGEPVGRTKKPRNSRKALKDKNSSPE--ESQSMVTKVTQPSEEENLSQN 60

Query: 61  QSSAKKPKSKAASKKQPGKQSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEE 120
           Q     PK KAA KKQP KQSFDKDLQEMQDMLQQL+LDKEKTEELLK KDEMLKQKDEE
Sbjct: 61  Q-----PKPKAAQKKQPAKQSFDKDLQEMQDMLQQLRLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQNELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCAEKKRPSPPYI 180
           LKTRDKEQEKLQ ELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKC+EKKRPSPPYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCSEKKRPSPPYI 180

Query: 181 LWCTDQWNEIKKENPEAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEK 240
           LWC DQWNEIKKENPEAEFKEISNILGAKWK VTAEEKKPYEERYQAEKEAYLQITSKEK
Sbjct: 181 LWCKDQWNEIKKENPEAEFKEISNILGAKWKSVTAEEKKPYEERYQAEKEAYLQITSKEK 240

Query: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKENKKKKKERDPLKPKQPMSAFFLFSN 300
           RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEK+NKKKKKERDPLKPKQPMSAFFLFSN
Sbjct: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKDNKKKKKERDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLFAENKNVIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360
           ERR SLFAENKNV+EVAKITG EWKNMTEEQRGPYEEMAKK KEKYMQEME YKQKKEEE
Sbjct: 301 ERRGSLFAENKNVLEVAKITGGEWKNMTEEQRGPYEEMAKKKKEKYMQEMETYKQKKEEE 360

Query: 361 AAILKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPA 420
           AA LKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKK VDPNKPKKPA
Sbjct: 361 AANLKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKNVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEV 480
           SSYILFSKEARK VMEE+PGVNNSTV+ALISVKWKELSEGERKIWNDKAAEAMEAYKKEV
Sbjct: 421 SSYILFSKEARKVVMEEKPGVNNSTVNALISVKWKELSEGERKIWNDKAAEAMEAYKKEV 480

Query: 481 EEYNKTVAE-MKGEEK 496
           EEYNKTVAE  KGEE+
Sbjct: 481 EEYNKTVAETTKGEEE 489

[Close]

BLAST of Tan0008895.1 vs. NCBI nr
Match: XP_023522074.1 (high mobility group B protein 6-like [Cucurbita pepo subsp. pepo] >XP_023528015.1 high mobility group B protein 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 791.6 bits (2043), Expect = 4.0e-225
Identity = 453/496 (91.33%), Postives = 467/496 (94.15%), Query Frame = 0


Query: 1   MADSATAEIPITGEPAGRAKKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQN 60
           MA SATAE+ +TGEP GR KKPRNSRKALKDKNSSPE  +SQ MVTK +QPSEEE LS N
Sbjct: 1   MASSATAEVLVTGEPVGRTKKPRNSRKALKDKNSSPE--ESQSMVTKVTQPSEEENLSLN 60

Query: 61  QSSAKKPKSKAASKKQPGKQSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEE 120
           Q     PK KAA KKQP KQSFDKDLQEMQDMLQQL+LDKEKTEELLK KDEMLKQKDEE
Sbjct: 61  Q-----PKPKAAQKKQPVKQSFDKDLQEMQDMLQQLRLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQNELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCAEKKRPSPPYI 180
           LKTRDKEQEKLQ ELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKC+EKKRPSPPYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCSEKKRPSPPYI 180

Query: 181 LWCTDQWNEIKKENPEAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEK 240
           LWC DQWNEIKKENPEAEFKEISNILGAKWK VTAEEKKPYEERYQAEKEAYLQITSKEK
Sbjct: 181 LWCKDQWNEIKKENPEAEFKEISNILGAKWKSVTAEEKKPYEERYQAEKEAYLQITSKEK 240

Query: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKENKKKKKERDPLKPKQPMSAFFLFSN 300
           RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEK+NKKKKKERDPLKPKQPMSAFFLFSN
Sbjct: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKDNKKKKKERDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLFAENKNVIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360
           ERR SLFAENKNV+EVAKITGEEWKNMTEEQRGPYEEMAKK KEKYMQEMEIYKQKKEEE
Sbjct: 301 ERRGSLFAENKNVLEVAKITGEEWKNMTEEQRGPYEEMAKKKKEKYMQEMEIYKQKKEEE 360

Query: 361 AAILKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPA 420
           AA LKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKK+KEGKK VDPNKPKKPA
Sbjct: 361 AANLKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKRKEGKKNVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEV 480
           SSYILFSKEARK +MEE+PGVNNSTV+ALISVKWKELSEGERK+WNDKAAEAMEAYKKEV
Sbjct: 421 SSYILFSKEARKVIMEEKPGVNNSTVNALISVKWKELSEGERKMWNDKAAEAMEAYKKEV 480

Query: 481 EEYNKTVAE-MKGEEK 496
           EEYNKTVAE  KGEE+
Sbjct: 481 EEYNKTVAETTKGEEE 489

[Close]

BLAST of Tan0008895.1 vs. NCBI nr
Match: KAG7031168.1 (High mobility group B protein 13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 790.0 bits (2039), Expect = 1.2e-224
Identity = 452/496 (91.13%), Postives = 466/496 (93.95%), Query Frame = 0


Query: 1   MADSATAEIPITGEPAGRAKKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQN 60
           MA SATAE+ +TGEP GR KKPRNSRKALKDKNSSPE  +SQ MVTK +QPSEEE LSQN
Sbjct: 1   MASSATAEVLVTGEPVGRTKKPRNSRKALKDKNSSPE--ESQSMVTKVTQPSEEENLSQN 60

Query: 61  QSSAKKPKSKAASKKQPGKQSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEE 120
           Q     PK KAA KKQP KQSFDKDLQEMQDMLQQL+LDKEKTEELLK KDEMLKQKDEE
Sbjct: 61  Q-----PKPKAAQKKQPAKQSFDKDLQEMQDMLQQLRLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQNELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCAEKKRPSPPYI 180
           LKTRDKEQEKLQ ELKKLQKLKEFKPNMNFPMIQILKDKEQ+KKEKKKC+EKKRPSPPYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPNMNFPMIQILKDKEQDKKEKKKCSEKKRPSPPYI 180

Query: 181 LWCTDQWNEIKKENPEAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEK 240
           LWC DQWNEIKKENPEAEFKEISNILGAKWK VTAEEKKPYEERYQAEKEAYLQITSKEK
Sbjct: 181 LWCKDQWNEIKKENPEAEFKEISNILGAKWKSVTAEEKKPYEERYQAEKEAYLQITSKEK 240

Query: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKENKKKKKERDPLKPKQPMSAFFLFSN 300
           RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEK+NKKKKKERDPLKPKQPMSAFFL+SN
Sbjct: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKDNKKKKKERDPLKPKQPMSAFFLYSN 300

Query: 301 ERRASLFAENKNVIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360
           ERR SLFAENKNV+EVAKITGEEWKNMTEEQRG YEEMAKK KEKYMQEMEIYKQKKEEE
Sbjct: 301 ERRGSLFAENKNVLEVAKITGEEWKNMTEEQRGHYEEMAKKKKEKYMQEMEIYKQKKEEE 360

Query: 361 AAILKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPA 420
           AA LKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKK VDPNKPKKPA
Sbjct: 361 AANLKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKNVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEV 480
           SSYILFSKEARK +MEE+PGVNNSTV+ALISVKWKELSEG RKIWNDKAAEAMEAYKKEV
Sbjct: 421 SSYILFSKEARKVIMEEKPGVNNSTVNALISVKWKELSEGNRKIWNDKAAEAMEAYKKEV 480

Query: 481 EEYNKTVAE-MKGEEK 496
           EEYNKTVAE  KGEE+
Sbjct: 481 EEYNKTVAETTKGEEE 489

[Close]

BLAST of Tan0008895.1 vs. NCBI nr
Match: KAG6600529.1 (High mobility group B protein 13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 788.1 bits (2034), Expect = 4.4e-224
Identity = 451/496 (90.93%), Postives = 466/496 (93.95%), Query Frame = 0


Query: 1   MADSATAEIPITGEPAGRAKKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQN 60
           MA SATAE+ +TGEP GR KKPRNSRKALKDKNSSPE  +SQ MVTK + PSEEE LSQN
Sbjct: 1   MASSATAEVLVTGEPVGRTKKPRNSRKALKDKNSSPE--ESQSMVTKVTHPSEEENLSQN 60

Query: 61  QSSAKKPKSKAASKKQPGKQSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEE 120
           Q     PK KAA KKQP KQSFDKDLQEMQDMLQQL+LDKEKTEELLK KDEMLKQKDEE
Sbjct: 61  Q-----PKPKAAQKKQPEKQSFDKDLQEMQDMLQQLRLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQNELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCAEKKRPSPPYI 180
           LKTRDKEQEKLQ ELKKLQKLKEFKPNMNFPMIQILKDKEQ+KKEKKKC+EKKRPSPPYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPNMNFPMIQILKDKEQDKKEKKKCSEKKRPSPPYI 180

Query: 181 LWCTDQWNEIKKENPEAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEK 240
           LWC DQWNEIKKENPEAEFKEISNILGAKWK VTAEEKKPYEERYQAEKEAYLQITSKEK
Sbjct: 181 LWCKDQWNEIKKENPEAEFKEISNILGAKWKSVTAEEKKPYEERYQAEKEAYLQITSKEK 240

Query: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKENKKKKKERDPLKPKQPMSAFFLFSN 300
           RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEK+NKKKKKERDPLKPKQPMSAFFL+SN
Sbjct: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKDNKKKKKERDPLKPKQPMSAFFLYSN 300

Query: 301 ERRASLFAENKNVIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360
           ERR SLFAENKNV+EVAKITGEEWKNMTEEQRG YEEMAKK KEKYMQEMEIYKQKKEEE
Sbjct: 301 ERRGSLFAENKNVLEVAKITGEEWKNMTEEQRGHYEEMAKKKKEKYMQEMEIYKQKKEEE 360

Query: 361 AAILKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPA 420
           AA LKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKK VDPNKPKKPA
Sbjct: 361 AANLKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKNVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEV 480
           SSYILFSKEARK +MEE+PGVNNSTV+ALISVKWKELSEG+RKIWNDKAAEAMEAYKKEV
Sbjct: 421 SSYILFSKEARKVIMEEKPGVNNSTVNALISVKWKELSEGDRKIWNDKAAEAMEAYKKEV 480

Query: 481 EEYNKTVAE-MKGEEK 496
           EEYNKTVAE  KGEE+
Sbjct: 481 EEYNKTVAETTKGEEE 489

[Close]

BLAST of Tan0008895.1 vs. NCBI nr
Match: XP_008451961.1 (PREDICTED: high mobility group B protein 6 [Cucumis melo])

HSP 1 Score: 787.3 bits (2032), Expect = 7.5e-224
Identity = 440/494 (89.07%), Postives = 468/494 (94.74%), Query Frame = 0


Query: 1   MADSATAEIPITGEPAGRAKKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQN 60
           MADS T E+P++G PA   KKPRNSRKALKDKNSSPE PQSQ MVTK + PSE E+LSQN
Sbjct: 1   MADSTTVELPVSGAPAVPTKKPRNSRKALKDKNSSPEVPQSQSMVTKVTTPSEGEILSQN 60

Query: 61  QSSAKKPKSKAASKKQPGKQSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEE 120
           QSSAKKPKSKAA+KKQP KQSFDKDLQEMQDMLQQLKLDKEKTEELLK KDEMLKQKDEE
Sbjct: 61  QSSAKKPKSKAAAKKQPAKQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQNELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCAEKKRPSPPYI 180
           LKTRDKEQEKLQ ELKKLQKLKEFKP MNFPMIQILKDKEQ+KKEKKKCAEKKRP+ PYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQILKDKEQDKKEKKKCAEKKRPAQPYI 180

Query: 181 LWCTDQWNEIKKENPEAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEK 240
           LWC DQWNEIKKENPEA+FKE SNILGAKWK + AEEKKPYEE+YQAEKE YL+ITS+EK
Sbjct: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTIPAEEKKPYEEKYQAEKETYLRITSREK 240

Query: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKENKKKKKERDPLKPKQPMSAFFLFSN 300
           RE+EAMKLLEEEQKQKTAMELL+QYLQFKEEAEKENKKKKKE+DPLKPKQPMSAFFLFSN
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLFAENKNVIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360
           ERRASL AENKN++E+AKI GEEWKNMTEEQ+GPYEEMAKKNKEKYMQEMEIYKQKKEEE
Sbjct: 301 ERRASLVAENKNIVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360

Query: 361 AAILKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPA 420
           AAILKKEEEEQMK+QKHEALLLLKKKEKTETIIKK+KEERQKKKKEGK  VDPNKPKKPA
Sbjct: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEV 480
           SSYILFSKEARKSVMEE+PGV+NSTV+ALISVKWKELSE ERKIWNDKAAEAMEAYKKEV
Sbjct: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEAYKKEV 480

Query: 481 EEYNKTVAEMKGEE 495
           EEYNK+VAEMKG++
Sbjct: 481 EEYNKSVAEMKGDD 494

[Close]

BLAST of Tan0008895.1 vs. ExPASy TrEMBL
Match: A0A6J1FQ69 (high mobility group B protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111447782 PE=4 SV=1)

HSP 1 Score: 793.5 bits (2048), Expect = 5.1e-226
Identity = 455/496 (91.73%), Postives = 466/496 (93.95%), Query Frame = 0


Query: 1   MADSATAEIPITGEPAGRAKKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQN 60
           MA SATAE+ +TGEP GR KKPRNSRKALKDKNSSPE  +SQ MVTK +QPSEEE LSQN
Sbjct: 1   MASSATAEVLVTGEPVGRTKKPRNSRKALKDKNSSPE--ESQSMVTKVTQPSEEENLSQN 60

Query: 61  QSSAKKPKSKAASKKQPGKQSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEE 120
           Q     PK KAA KKQP KQSFDKDLQEMQDMLQQL+LDKEKTEELLK KDEMLKQKDEE
Sbjct: 61  Q-----PKPKAAQKKQPAKQSFDKDLQEMQDMLQQLRLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQNELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCAEKKRPSPPYI 180
           LKTRDKEQEKLQ ELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKC+EKKRPSPPYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCSEKKRPSPPYI 180

Query: 181 LWCTDQWNEIKKENPEAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEK 240
           LWC DQWNEIKKENPEAEFKEISNILGAKWK VTAEEKKPYEERYQAEKEAYLQITSKEK
Sbjct: 181 LWCKDQWNEIKKENPEAEFKEISNILGAKWKSVTAEEKKPYEERYQAEKEAYLQITSKEK 240

Query: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKENKKKKKERDPLKPKQPMSAFFLFSN 300
           RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEK+NKKKKKERDPLKPKQPMSAFFLFSN
Sbjct: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKDNKKKKKERDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLFAENKNVIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360
           ERR SLFAENKNV+EVAKITG EWKNMTEEQRGPYEEMAKK KEKYMQEME YKQKKEEE
Sbjct: 301 ERRGSLFAENKNVLEVAKITGGEWKNMTEEQRGPYEEMAKKKKEKYMQEMETYKQKKEEE 360

Query: 361 AAILKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPA 420
           AA LKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKK VDPNKPKKPA
Sbjct: 361 AANLKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKNVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEV 480
           SSYILFSKEARK VMEE+PGVNNSTV+ALISVKWKELSEGERKIWNDKAAEAMEAYKKEV
Sbjct: 421 SSYILFSKEARKVVMEEKPGVNNSTVNALISVKWKELSEGERKIWNDKAAEAMEAYKKEV 480

Query: 481 EEYNKTVAE-MKGEEK 496
           EEYNKTVAE  KGEE+
Sbjct: 481 EEYNKTVAETTKGEEE 489

[Close]

BLAST of Tan0008895.1 vs. ExPASy TrEMBL
Match: A0A1S3BS50 (high mobility group B protein 6 OS=Cucumis melo OX=3656 GN=LOC103493110 PE=4 SV=1)

HSP 1 Score: 787.3 bits (2032), Expect = 3.6e-224
Identity = 440/494 (89.07%), Postives = 468/494 (94.74%), Query Frame = 0


Query: 1   MADSATAEIPITGEPAGRAKKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQN 60
           MADS T E+P++G PA   KKPRNSRKALKDKNSSPE PQSQ MVTK + PSE E+LSQN
Sbjct: 1   MADSTTVELPVSGAPAVPTKKPRNSRKALKDKNSSPEVPQSQSMVTKVTTPSEGEILSQN 60

Query: 61  QSSAKKPKSKAASKKQPGKQSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEE 120
           QSSAKKPKSKAA+KKQP KQSFDKDLQEMQDMLQQLKLDKEKTEELLK KDEMLKQKDEE
Sbjct: 61  QSSAKKPKSKAAAKKQPAKQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQNELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCAEKKRPSPPYI 180
           LKTRDKEQEKLQ ELKKLQKLKEFKP MNFPMIQILKDKEQ+KKEKKKCAEKKRP+ PYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQILKDKEQDKKEKKKCAEKKRPAQPYI 180

Query: 181 LWCTDQWNEIKKENPEAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEK 240
           LWC DQWNEIKKENPEA+FKE SNILGAKWK + AEEKKPYEE+YQAEKE YL+ITS+EK
Sbjct: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTIPAEEKKPYEEKYQAEKETYLRITSREK 240

Query: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKENKKKKKERDPLKPKQPMSAFFLFSN 300
           RE+EAMKLLEEEQKQKTAMELL+QYLQFKEEAEKENKKKKKE+DPLKPKQPMSAFFLFSN
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLFAENKNVIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360
           ERRASL AENKN++E+AKI GEEWKNMTEEQ+GPYEEMAKKNKEKYMQEMEIYKQKKEEE
Sbjct: 301 ERRASLVAENKNIVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360

Query: 361 AAILKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPA 420
           AAILKKEEEEQMK+QKHEALLLLKKKEKTETIIKK+KEERQKKKKEGK  VDPNKPKKPA
Sbjct: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEV 480
           SSYILFSKEARKSVMEE+PGV+NSTV+ALISVKWKELSE ERKIWNDKAAEAMEAYKKEV
Sbjct: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEAYKKEV 480

Query: 481 EEYNKTVAEMKGEE 495
           EEYNK+VAEMKG++
Sbjct: 481 EEYNKSVAEMKGDD 494

[Close]

BLAST of Tan0008895.1 vs. ExPASy TrEMBL
Match: A0A6J1IZC2 (high mobility group B protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111479826 PE=4 SV=1)

HSP 1 Score: 784.3 bits (2024), Expect = 3.1e-223
Identity = 447/496 (90.12%), Postives = 465/496 (93.75%), Query Frame = 0


Query: 1   MADSATAEIPITGEPAGRAKKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQN 60
           MA SATAE+ +TGEP GR KKPRNSRKALKDKNSSPE  +SQ MVTK +QPSEEE LS N
Sbjct: 1   MASSATAEVLVTGEPVGRTKKPRNSRKALKDKNSSPE--ESQSMVTKVTQPSEEEDLSLN 60

Query: 61  QSSAKKPKSKAASKKQPGKQSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEE 120
           Q     PK KAA KKQP KQSFDKDLQEMQDMLQQL+L+KEKTEELLK KDEMLKQKDEE
Sbjct: 61  Q-----PKPKAAQKKQPAKQSFDKDLQEMQDMLQQLRLEKEKTEELLKAKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQNELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCAEKKRPSPPYI 180
           LKT+DKEQEKLQ ELKKLQKLKEFKPNMNFPMIQILKDKEQ+KKEKKKC+EKKRPSPPYI
Sbjct: 121 LKTKDKEQEKLQIELKKLQKLKEFKPNMNFPMIQILKDKEQDKKEKKKCSEKKRPSPPYI 180

Query: 181 LWCTDQWNEIKKENPEAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEK 240
           LWC DQWNEIKKENPEAEFKEISNILGAKWK VTAEEKKPYEERYQAEKEAYLQITSKEK
Sbjct: 181 LWCKDQWNEIKKENPEAEFKEISNILGAKWKSVTAEEKKPYEERYQAEKEAYLQITSKEK 240

Query: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKENKKKKKERDPLKPKQPMSAFFLFSN 300
           RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEK++KKKKKERDPLKPKQPMSAFFLFSN
Sbjct: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKDSKKKKKERDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLFAENKNVIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360
           ERR SLFAENKNV+EVAKITGEEWKNMTEEQRGPYEEMAKK KEKYMQEME YKQKKEEE
Sbjct: 301 ERRGSLFAENKNVLEVAKITGEEWKNMTEEQRGPYEEMAKKKKEKYMQEMEFYKQKKEEE 360

Query: 361 AAILKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPA 420
           AA LKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKK  DPNKPKKPA
Sbjct: 361 AANLKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKNTDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEV 480
           SSYILFSKEARK +MEE+PGVNNSTV+ALISVKWKELSEGERK+WNDKAAEAMEAYKK+V
Sbjct: 421 SSYILFSKEARKVIMEEKPGVNNSTVNALISVKWKELSEGERKMWNDKAAEAMEAYKKQV 480

Query: 481 EEYNKTVAE-MKGEEK 496
           EEYNKTVAE  KGEE+
Sbjct: 481 EEYNKTVAETTKGEEE 489

[Close]

BLAST of Tan0008895.1 vs. ExPASy TrEMBL
Match: A0A0A0KZT4 (Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_4G051430 PE=4 SV=1)

HSP 1 Score: 784.3 bits (2024), Expect = 3.1e-223
Identity = 438/494 (88.66%), Postives = 466/494 (94.33%), Query Frame = 0


Query: 1   MADSATAEIPITGEPAGRAKKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQN 60
           MADS T + P+TG PAG  KKPRNSRKALKDKNSSPE PQSQ MV K + PSE E+LSQN
Sbjct: 1   MADSTTLQPPVTGAPAGPTKKPRNSRKALKDKNSSPEVPQSQSMVPKVTAPSEGEILSQN 60

Query: 61  QSSAKKPKSKAASKKQPGKQSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEE 120
           Q+SAKKPKSKAA+KKQP  QSFDKDLQEMQDMLQQLKLDKEKTEELLK KDEMLKQKDEE
Sbjct: 61  QTSAKKPKSKAAAKKQPANQSFDKDLQEMQDMLQQLKLDKEKTEELLKEKDEMLKQKDEE 120

Query: 121 LKTRDKEQEKLQNELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCAEKKRPSPPYI 180
           LKTRDKEQEKLQ ELKKLQKLKEFKP MNFPMIQI KDKEQ+KKEKKKCAEKKRP+PPYI
Sbjct: 121 LKTRDKEQEKLQIELKKLQKLKEFKPTMNFPMIQIFKDKEQDKKEKKKCAEKKRPAPPYI 180

Query: 181 LWCTDQWNEIKKENPEAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEK 240
           LWC DQWNEIKKENPEA+FKE SNILGAKWK ++AEEKKPYEE+YQAEKE YL+ITSKEK
Sbjct: 181 LWCKDQWNEIKKENPEADFKETSNILGAKWKTISAEEKKPYEEKYQAEKETYLRITSKEK 240

Query: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKENKKKKKERDPLKPKQPMSAFFLFSN 300
           RE+EAMKLLEEEQKQKTAMELL+QYLQFKEEAEKENKKKKKE+DPLKPKQPMSAFFLFSN
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKEEAEKENKKKKKEKDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLFAENKNVIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360
           ERRASL AENKNV+E+AKI GEEWKNMTEEQ+GPYEEMAKKNKEKYMQEMEIY+QKKEEE
Sbjct: 301 ERRASLVAENKNVVELAKIAGEEWKNMTEEQKGPYEEMAKKNKEKYMQEMEIYEQKKEEE 360

Query: 361 AAILKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPA 420
           AAILKKEEEEQMK+QKHEALLLLKKKEKTETIIKK+KEERQKKKKEGK  VDPNKPKKPA
Sbjct: 361 AAILKKEEEEQMKVQKHEALLLLKKKEKTETIIKKSKEERQKKKKEGKNPVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEV 480
           SSYILFSKEARKSVMEE+PGV+NSTV+ALISVKWKELSE ERKIWNDKAAEAME YKKEV
Sbjct: 421 SSYILFSKEARKSVMEEKPGVSNSTVNALISVKWKELSEEERKIWNDKAAEAMEGYKKEV 480

Query: 481 EEYNKTVAEMKGEE 495
           EEYNK+VAEMKG++
Sbjct: 481 EEYNKSVAEMKGDD 494

[Close]

BLAST of Tan0008895.1 vs. ExPASy TrEMBL
Match: A0A6J1C6T7 (high mobility group B protein 13 OS=Momordica charantia OX=3673 GN=LOC111008505 PE=4 SV=1)

HSP 1 Score: 769.6 bits (1986), Expect = 7.9e-219
Identity = 438/496 (88.31%), Postives = 459/496 (92.54%), Query Frame = 0


Query: 1   MADSATAEIPITGEPAGRAKKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQN 60
           MADSATAEIPI GEPAGR KKPRNSRKALKDKNSSPE PQSQ MVTK +Q S EE LSQN
Sbjct: 1   MADSATAEIPINGEPAGRTKKPRNSRKALKDKNSSPEEPQSQSMVTKVTQSSVEESLSQN 60

Query: 61  QSSAKKPKSKAASKKQPGKQSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEE 120
            SS KK KSKAA KKQ  K SFDK+LQEMQDMLQQL+LDKEKTEELLK KDE+LKQKDEE
Sbjct: 61  LSSPKKSKSKAAPKKQQAKPSFDKELQEMQDMLQQLRLDKEKTEELLKAKDEILKQKDEE 120

Query: 121 LKTRDKEQEKLQNELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKKCAEKKRPSPPYI 180
           LKTRDKEQEKL  ELKKLQKLKEFKP MNFPM+QI KDKEQEKKEKKKC EKKRPSPPYI
Sbjct: 121 LKTRDKEQEKLHIELKKLQKLKEFKPTMNFPMVQIYKDKEQEKKEKKKCPEKKRPSPPYI 180

Query: 181 LWCTDQWNEIKKENPEAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEK 240
           LWC DQWNEIKKENPEAEFKEISNILGAKWK +TA+EKKPYE RYQAEKEA+LQITSKEK
Sbjct: 181 LWCKDQWNEIKKENPEAEFKEISNILGAKWKTITADEKKPYEGRYQAEKEAFLQITSKEK 240

Query: 241 RETEAMKLLEEEQKQKTAMELLDQYLQFKEEAEKENKKKKKERDPLKPKQPMSAFFLFSN 300
           RE+EAMKLLEEEQKQKTAMELL+QYLQFK EAEKEN KKKKE+DPLKPKQPMSAFFLFSN
Sbjct: 241 RESEAMKLLEEEQKQKTAMELLEQYLQFKGEAEKEN-KKKKEKDPLKPKQPMSAFFLFSN 300

Query: 301 ERRASLFAENKNVIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEE 360
           ERRA+L AENKN++EVAK+ GEEWKNMTEEQR PYEEMAKKN++KY QEMEIYKQKKEEE
Sbjct: 301 ERRATLLAENKNILEVAKLAGEEWKNMTEEQRVPYEEMAKKNRDKYTQEMEIYKQKKEEE 360

Query: 361 AAILKKEEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPA 420
           AAILKKEEEEQMKLQKHEAL+LLKKKEK ETIIKKTKEERQKKKKEGKK VDPNKPKKPA
Sbjct: 361 AAILKKEEEEQMKLQKHEALMLLKKKEKNETIIKKTKEERQKKKKEGKKNVDPNKPKKPA 420

Query: 421 SSYILFSKEARKSVMEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEV 480
           SSYILFSKEARK+VMEERPGVNNSTV+ALISVKWKELSEGERKIWND+AAEAME YKKEV
Sbjct: 421 SSYILFSKEARKTVMEERPGVNNSTVNALISVKWKELSEGERKIWNDRAAEAMEGYKKEV 480

Query: 481 EEYNKTVAEMKGEEKA 497
           EEYNKTVAEMK    A
Sbjct: 481 EEYNKTVAEMKNAADA 495

[Close]

BLAST of Tan0008895.1 vs. TAIR 10
Match: AT4G11080.1 (HMG (high mobility group) box protein )

HSP 1 Score: 498.8 bits (1283), Expect = 5.0e-141
Identity = 304/480 (63.33%), Postives = 364/480 (75.83%), Query Frame = 0


Query: 11  ITGEPAGRAKKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQNQSSAKKPKSK 70
           ++ +PA  AKK RNSRKALK KN   E                               S 
Sbjct: 4   VSSDPA-HAKKSRNSRKALKQKNEIVE-------------------------------SS 63

Query: 71  AASKKQPGKQSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEELKTRDKEQEK 130
             S K    +SF+KDL EMQ ML+++K++KEKTE+LLK KDE+L++K       + EQEK
Sbjct: 64  PVSDKGKETKSFEKDLMEMQAMLEKMKIEKEKTEDLLKEKDEILRKK-------EVEQEK 123

Query: 131 LQNELKKLQKLKEFKPNMNFPMIQILKDKEQEKKEKKK---CAEKKRPSPPYILWCTDQW 190
           L+ ELKKLQK+KEFKPNM F   Q L   E+EKK KKK   CAE KRPS PYILWC D W
Sbjct: 124 LKTELKKLQKMKEFKPNMTFAFSQSLAQTEEEKKGKKKKKDCAETKRPSTPYILWCKDNW 183

Query: 191 NEIKKENPEAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEKRETEAMK 250
           NE+KK+NPEA+FKE SNILGAKWKG++AEEKKPYEE+YQA+KEAYLQ+ +KEKRE EAMK
Sbjct: 184 NEVKKQNPEADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAYLQVITKEKREREAMK 243

Query: 251 LLEEEQKQKTAMELLDQYLQFKEEAEKENKKK-KKERDPLKPKQPMSAFFLFSNERRASL 310
           LL++EQKQKTAMELLDQYL F +EAE +NKKK KK +DPLKPKQP+SA+ +++NERRA+L
Sbjct: 244 LLDDEQKQKTAMELLDQYLHFVQEAEHDNKKKAKKIKDPLKPKQPISAYLIYANERRAAL 303

Query: 311 FAENKNVIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEEAAILKK 370
             ENK+VIEVAK+ GEEWKN++EE++ PY++MAKKNKE Y+QEME YK+ KEEEA   KK
Sbjct: 304 KGENKSVIEVAKMAGEEWKNLSEEKKAPYDQMAKKNKEIYLQEMEGYKRTKEEEAMSQKK 363

Query: 371 EEEEQMKLQKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPASSYILF 430
           EEEE MKL K EAL LLKKKEKT+ IIKKTKE  + KKK   + VDPNKPKKP SSY LF
Sbjct: 364 EEEEFMKLHKQEALQLLKKKEKTDNIIKKTKETAKNKKK--NENVDPNKPKKPTSSYFLF 423

Query: 431 SKEARKSVMEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEVEEYNKT 487
            K+ARKSV+EE PG+NNSTV+A IS+KW EL E E++++N KAAE MEAYKKEVEEYNKT
Sbjct: 424 CKDARKSVLEEHPGINNSTVTAHISLKWMELGEEEKQVYNSKAAELMEAYKKEVEEYNKT 442

[Close]

BLAST of Tan0008895.1 vs. TAIR 10
Match: AT4G23800.1 (HMG (high mobility group) box protein )

HSP 1 Score: 494.2 bits (1271), Expect = 1.2e-139
Identity = 299/474 (63.08%), Postives = 366/474 (77.22%), Query Frame = 0


Query: 20  KKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQNQSSAKKPKSKAASKKQPGK 79
           KKPRNSRKALK KN   E P S   V                      K K+A       
Sbjct: 11  KKPRNSRKALKQKNELVETPPSPVSV----------------------KGKSA------- 70

Query: 80  QSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEELKTRDKEQEKLQNELKKLQ 139
           +SF++DL EMQ ML+++K++K+KTEELLK KDE+L++K+EEL+TRD EQEKL+ ELKKLQ
Sbjct: 71  KSFEQDLMEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEELETRDAEQEKLKVELKKLQ 130

Query: 140 KLKEFKPNMNFPMIQ-ILKDKEQE---KKEKKKCAEKKRPSPPYILWCTDQWNEIKKENP 199
           K+KEFKPNM F   Q  L   EQE   KK+KK C E KRPS  Y+LWC DQW E+KKENP
Sbjct: 131 KMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPSSSYVLWCKDQWTEVKKENP 190

Query: 200 EAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEKRETEAMKLLEEEQKQ 259
           EA+FKE SNILGAKWK ++AE+KKPYEERYQ EKEAYLQ+ +KEKRE EAMKLLE++QKQ
Sbjct: 191 EADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEAYLQVIAKEKREKEAMKLLEDDQKQ 250

Query: 260 KTAMELLDQYLQFKEEAEKENKKK-KKERDPLKPKQPMSAFFLFSNERRASLFAENKNVI 319
           +TAMELLDQYL F +EAE++NKKK KKE+DPLKPK P+SAF +++NERRA+L  ENK+V+
Sbjct: 251 RTAMELLDQYLNFVQEAEQDNKKKNKKEKDPLKPKHPVSAFLVYANERRAALREENKSVV 310

Query: 320 EVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEEAAILKKEEEEQMKL 379
           EVAKITGEEWKN++++++ PYE++AKKNKE Y+Q ME YK+ KEEEA   KKEEEE +KL
Sbjct: 311 EVAKITGEEWKNLSDKKKAPYEKVAKKNKETYLQAMEEYKRTKEEEALSQKKEEEELLKL 370

Query: 380 QKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPASSYILFSKEARKSV 439
            K EAL +LKKKEKT+ +IKK K  ++KK +     VDPNKPKKPASSY LFSK+ RK +
Sbjct: 371 HKQEALQMLKKKEKTDNLIKKEKATKKKKNEN----VDPNKPKKPASSYFLFSKDERKKL 430

Query: 440 MEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEVEEYNKTVA 489
            EERPG NN+TV+ALIS+KWKELSE E++++N KAA+ MEAYKKEVE YNK  A
Sbjct: 431 TEERPGTNNATVTALISLKWKELSEEEKQVYNGKAAKLMEAYKKEVEAYNKKSA 451

[Close]

BLAST of Tan0008895.1 vs. TAIR 10
Match: AT4G23800.2 (HMG (high mobility group) box protein )

HSP 1 Score: 493.0 bits (1268), Expect = 2.7e-139
Identity = 298/474 (62.87%), Postives = 362/474 (76.37%), Query Frame = 0


Query: 20  KKPRNSRKALKDKNSSPEGPQSQPMVTKASQPSEEEVLSQNQSSAKKPKSKAASKKQPGK 79
           KKPRNSRKALK KN   E P S   V                      K K+A       
Sbjct: 11  KKPRNSRKALKQKNELVETPPSPVSV----------------------KGKSA------- 70

Query: 80  QSFDKDLQEMQDMLQQLKLDKEKTEELLKTKDEMLKQKDEELKTRDKEQEKLQNELKKLQ 139
           +SF++DL EMQ ML+++K++K+KTEELLK KDE+L++K+EEL+TRD EQEKL+ ELKKLQ
Sbjct: 71  KSFEQDLMEMQTMLEKMKIEKDKTEELLKEKDEILRKKEEELETRDAEQEKLKVELKKLQ 130

Query: 140 KLKEFKPNMNFPMIQ-ILKDKEQE---KKEKKKCAEKKRPSPPYILWCTDQWNEIKKENP 199
           K+KEFKPNM F   Q  L   EQE   KK+KK C E KRPS  Y+LWC DQW E+KKENP
Sbjct: 131 KMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPSSSYVLWCKDQWTEVKKENP 190

Query: 200 EAEFKEISNILGAKWKGVTAEEKKPYEERYQAEKEAYLQITSKEKRETEAMKLLEEEQKQ 259
           EA+FKE SNILGAKWK ++AE+KKPYEERYQ EKEAYLQ+ +KEKRE EAMKLLE++QKQ
Sbjct: 191 EADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEAYLQVIAKEKREKEAMKLLEDDQKQ 250

Query: 260 KTAMELLDQYLQFKEEAEKENKKK-KKERDPLKPKQPMSAFFLFSNERRASLFAENKNVI 319
           +TAMELLDQYL F +EAE++NKKK KKE+DPLKPK P+SAF +++NERRA+L  ENK+V+
Sbjct: 251 RTAMELLDQYLNFVQEAEQDNKKKNKKEKDPLKPKHPVSAFLVYANERRAALREENKSVV 310

Query: 320 EVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEIYKQKKEEEAAILKKEEEEQMKL 379
           EVAKITGEEWKN++++++ PYE++AKKNKE Y+Q ME YK+ KEEEA   KKEEEE +KL
Sbjct: 311 EVAKITGEEWKNLSDKKKAPYEKVAKKNKETYLQAMEEYKRTKEEEALSQKKEEEELLKL 370

Query: 380 QKHEALLLLKKKEKTETIIKKTKEERQKKKKEGKKLVDPNKPKKPASSYILFSKEARKSV 439
            K EAL +LKKKEKT+ +IKK K E           VDPNKPKKPASSY LFSK+ RK +
Sbjct: 371 HKQEALQMLKKKEKTDNLIKKKKNEN----------VDPNKPKKPASSYFLFSKDERKKL 430

Query: 440 MEERPGVNNSTVSALISVKWKELSEGERKIWNDKAAEAMEAYKKEVEEYNKTVA 489
            EERPG NN+TV+ALIS+KWKELSE E++++N KAA+ MEAYKKEVE YNK  A
Sbjct: 431 TEERPGTNNATVTALISLKWKELSEEEKQVYNGKAAKLMEAYKKEVEAYNKKSA 445

[Close]

BLAST of Tan0008895.1 vs. TAIR 10
Match: AT3G51880.1 (high mobility group B1 )

HSP 1 Score: 50.8 bits (120), Expect = 3.6e-06
Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 238 KEKRETEAMKLLEEEQ--KQKTAMELLDQYLQFKEEAEKENKKKKKERDPLKPKQPMSAF 297
           K K   EA+K +++ +  K+K   E        K    +  K+KK ++DP KPK+  SAF
Sbjct: 9   KVKTTKEALKPVDDRKVGKRKAPAE--------KPTKRETRKEKKAKKDPNKPKRAPSAF 68

Query: 298 FLFSNERRASLFAENKN---VIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEI 357
           F+F  + R +   EN N   V  V K  G++WK+M++ ++ PYEE A K K +Y ++M+ 
Sbjct: 69  FVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDA 128

Query: 358 YKQKKEEEAAILKKEEEE 371
           Y +  EE +   +K   E
Sbjct: 129 YNKNLEEGSDESEKSRSE 138

[Close]

BLAST of Tan0008895.1 vs. TAIR 10
Match: AT3G51880.2 (high mobility group B1 )

HSP 1 Score: 50.8 bits (120), Expect = 3.6e-06
Identity = 47/138 (34.06%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 238 KEKRETEAMKLLEEEQ--KQKTAMELLDQYLQFKEEAEKENKKKKKERDPLKPKQPMSAF 297
           K K   EA+K +++ +  K+K   E        K    +  K+KK ++DP KPK+  SAF
Sbjct: 9   KVKTTKEALKPVDDRKVGKRKAPAE--------KPTKRETRKEKKAKKDPNKPKRAPSAF 68

Query: 298 FLFSNERRASLFAENKN---VIEVAKITGEEWKNMTEEQRGPYEEMAKKNKEKYMQEMEI 357
           F+F  + R +   EN N   V  V K  G++WK+M++ ++ PYEE A K K +Y ++M+ 
Sbjct: 69  FVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDA 128

Query: 358 YKQKKEEEAAILKKEEEE 371
           Y +  EE +   +K   E
Sbjct: 129 YNKNLEEGSDESEKSRSE 138

The following BLAST results are available for this feature:

BLAST of Tan0008895.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T012	7.0e-140	63.33	High mobility group B protein 13 OS=Arabidopsis thaliana OX=3702 GN=HMGB13 PE=2 ...	[more]
Q9SUP7	1.7e-138	63.08	High mobility group B protein 6 OS=Arabidopsis thaliana OX=3702 GN=HMGB6 PE=2 SV...	[more]
P40618	1.5e-12	28.92	High mobility group protein B3 OS=Gallus gallus OX=9031 GN=HMGB3 PE=2 SV=3	[more]
Q32L31	1.4e-10	27.94	High mobility group protein B3 OS=Bos taurus OX=9913 GN=HMGB3 PE=2 SV=2	[more]
O54879	1.4e-10	27.94	High mobility group protein B3 OS=Mus musculus OX=10090 GN=Hmgb3 PE=1 SV=3	[more]

BLAST of Tan0008895.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942886.1	1.0e-225	91.73	high mobility group B protein 6-like [Cucurbita moschata]	[more]
XP_023522074.1	4.0e-225	91.33	high mobility group B protein 6-like [Cucurbita pepo subsp. pepo] >XP_023528015....	[more]
KAG7031168.1	1.2e-224	91.13	High mobility group B protein 13, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6600529.1	4.4e-224	90.93	High mobility group B protein 13, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_008451961.1	7.5e-224	89.07	PREDICTED: high mobility group B protein 6 [Cucumis melo]	[more]

BLAST of Tan0008895.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FQ69	5.1e-226	91.73	high mobility group B protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC1114477...	[more]
A0A1S3BS50	3.6e-224	89.07	high mobility group B protein 6 OS=Cucumis melo OX=3656 GN=LOC103493110 PE=4 SV=...	[more]
A0A6J1IZC2	3.1e-223	90.12	high mobility group B protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111479826...	[more]
A0A0A0KZT4	3.1e-223	88.66	Transcription factor OS=Cucumis sativus OX=3659 GN=Csa_4G051430 PE=4 SV=1	[more]
A0A6J1C6T7	7.9e-219	88.31	high mobility group B protein 13 OS=Momordica charantia OX=3673 GN=LOC111008505 ...	[more]

BLAST of Tan0008895.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11080.1	5.0e-141	63.33	HMG (high mobility group) box protein	[more]
AT4G23800.1	1.2e-139	63.08	HMG (high mobility group) box protein	[more]
AT4G23800.2	2.7e-139	62.87	HMG (high mobility group) box protein	[more]
AT3G51880.1	3.6e-06	34.06	high mobility group B1	[more]
AT3G51880.2	3.6e-06	34.06	high mobility group B1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 386..406
None	No IPR available	COILS	Coil	Coil	coord: 79..144
None	No IPR available	COILS	Coil	Coil	coord: 153..173
None	No IPR available	COILS	Coil	Coil	coord: 466..493
None	No IPR available	COILS	Coil	Coil	coord: 258..282
None	No IPR available	COILS	Coil	Coil	coord: 336..374
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 393..415
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 393..424
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..128
None	No IPR available	PANTHER	PTHR46912:SF1	HIGH MOBILITY GROUP B PROTEIN 13	coord: 19..492
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 288..351 e-value: 4.40872E-14 score: 64.9565
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 416..481 e-value: 1.07473E-12 score: 61.1045
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 174..232 e-value: 5.6027E-12 score: 59.1785
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 415..485 e-value: 4.7E-19 score: 79.3 coord: 287..355 e-value: 1.4E-23 score: 94.3 coord: 171..241 e-value: 1.6E-16 score: 70.9
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 173..234 e-value: 2.7E-17 score: 63.0 coord: 288..354 e-value: 6.5E-18 score: 64.9 coord: 416..484 e-value: 6.1E-17 score: 61.8
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 172..240 score: 16.018221
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 416..484 score: 17.818676
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 288..354 score: 19.172863
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 395..495 e-value: 1.2E-23 score: 85.3 coord: 271..369 e-value: 3.4E-23 score: 83.8
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 170..238 e-value: 2.0E-18 score: 68.8
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 275..361
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 161..234
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 407..489
IPR044601	3xHMG-box protein HMGB6/HMGB13	PANTHER	PTHR46912	HIGH MOBILITY GROUP B PROTEIN 13	coord: 19..492

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0008895	Tan0008895	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0008895.1-exon	Tan0008895.1-exon-LG01:10883624..10884033	exon
Tan0008895.1-exon	Tan0008895.1-exon-LG01:10884144..10884228	exon
Tan0008895.1-exon	Tan0008895.1-exon-LG01:10884319..10884416	exon
Tan0008895.1-exon	Tan0008895.1-exon-LG01:10884519..10884689	exon
Tan0008895.1-exon	Tan0008895.1-exon-LG01:10884775..10884840	exon
Tan0008895.1-exon	Tan0008895.1-exon-LG01:10884959..10885064	exon
Tan0008895.1-exon	Tan0008895.1-exon-LG01:10885142..10885413	exon
Tan0008895.1-exon	Tan0008895.1-exon-LG01:10885506..10885628	exon
Tan0008895.1-exon	Tan0008895.1-exon-LG01:10885797..10886270	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0008895.1-three_prime_utr	Tan0008895.1-three_prime_utr-LG01:10883624..10883907	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0008895.1-cds	Tan0008895.1-cds-LG01:10883908..10884033	CDS
Tan0008895.1-cds	Tan0008895.1-cds-LG01:10884144..10884228	CDS
Tan0008895.1-cds	Tan0008895.1-cds-LG01:10884319..10884416	CDS
Tan0008895.1-cds	Tan0008895.1-cds-LG01:10884519..10884689	CDS
Tan0008895.1-cds	Tan0008895.1-cds-LG01:10884775..10884840	CDS
Tan0008895.1-cds	Tan0008895.1-cds-LG01:10884959..10885064	CDS
Tan0008895.1-cds	Tan0008895.1-cds-LG01:10885142..10885413	CDS
Tan0008895.1-cds	Tan0008895.1-cds-LG01:10885506..10885628	CDS
Tan0008895.1-cds	Tan0008895.1-cds-LG01:10885797..10886240	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0008895.1-five_prime_utr	Tan0008895.1-five_prime_utr-LG01:10886241..10886270	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0008895.1	Tan0008895.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding