
Tan0008147.5 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGGTGAATAAAAATTAGAAAAAAAAAGAAAAAATTGGAAACGGACAATTCCCCAAGCATGGCGACACGAGTATGTTCCCGATCGCTCTTCAACTCTTCAGCACTTGGAGCAATTCGACCTTTTCTTAAACCCTAAATATCCAATTTACAATTTGATCGATATCATTTGATTTGTACGTATACGCTTCTCTGTCTTCTCTGTGCATTTCATTTTGTTCTATCCTGTTTGGTTCCCGAGAAAACCAGGGGAAGAAAAAGAAACTGAAAATGAAAGTAAATAAGTCTTTTTGGAAACTGGGAACTTGTGAAAATACATCCAATTTTGTTGGAGAGATTGGCCTCATATGAGTTCATTGAAACCCTGAAACTCAAACTTGTATTAATTTTGGAGGTGGGGTTGTTTGGAACTATTGTTCGGTGCTGTCTTGCTGAGGAAACAGAGAAAATGCTGGCAGAAGATGATTTCAACTTCTAAACTTATGTATTTCATTATGGTTTTGATCCCATTGTTTTTTTTTTTTTTTTTATATTTCAACTCAGGTATGCAACTGGAGATGGTTCTGGTGACTTAAAAACTTGTGGTGTTATTTGTTTCAGAGTTGATTTGTTTCTGTGCTTATTTTGGATGTGAAGATGGATGTGGAGGAAGGTAGACATAAAGTAGAACTAAGTGATGTATGTAAGTGCTGTGATTTGAAATTGAGGTGTGAAAGAGCTGAAGAAAAATGTGAAGACTTAGAATTGAAGATTCAGATAAAGAAAATCGAGTGTGAATTACTTCAAAGCCAATTGAAGAAATTGGAGTCAGAAAAGTCAGCAATCGAAGAAGAGCTAAAAGTTTGGATGGAGAAGGGTCGTGAACCTGGACAGCAGGTTAGTTGTGCTGAAGATGGAAAGAAGCTTTGTTTTGAGGAGGGAAAGAAAGGAGTTGTGAATTTAATTGATAAGAATGATGTGGAAGATGAGGTTGTTCAGCTTCTGATTGAGAATAATGTTTTGGCTGTTGAGAAGAAGAAGGCTGAAACTGAGGCTAAGATGTGGAAAGATAAGTTCAAAAAATTGGAGATTCAGATCTCGAAGTTGGATGAAAGTTTCGTTGTGAAATCTGACGAGCCAGTGCTTTCTGGGAGGTTTGAAGGGGGAATTGGATCACCATTGAGTCCCGAAGCTCACCTTTCGGATGGTGTAGCCTCTAACCATCATTCCCTTAGTAAAGAAATTAGAGACTTGCAAACAGGTATTCTTTTCTTTATCTTGTCTTTGTTTTTTCCTCGTAATACCATATAAGAAGACAACCGCCCAACACTTCAATGATACGTCGGATTGAATCATATTATATTTAATATCTTAGATGAGTAGTCATGAAGACTTTAACCTATCACACGTGCAGTTATTTAAAAAAAGTGTTTTACACTAAATAAATTACATGTTACTTTTTACCTGATTAATTCAGATTGACTGTTTTCTAACAATTTCCTTTTGCGTTTGGTGGATATGCTCTAATGATAGGAACACCTCCAAATGGTTCACCACACATTCAAACTGTTTCCCTCGGGCGAGGGAAGAAATTCCGTTGTCTAGAATCTTATTTCAAGCATGGAAATCAAGTTAGAAAACAGTTGAATTTTGAAGAAGAGAGCCCCAGCAAAAAGATAGCCCCATTAACTCCAGCTGTTTCTAGACCTTTACATGGCATCATTAACATTGATGATAGTGATGATGAACTGATTATTGCCAAATTGCCCTCTTCTCATAATCAGAAAAAGAGTGAGGTCCGTGTTTCAGCAGCTCTAGATTTAAGTGGATGTGGATCTATTTGTTCCGAGGATAAAATACGCAATGTGGAAAATATGGAAGCTTTTAGTGATGGTTTTATCTTTAATTCAACACCCAAAAGGAAACGGGCTTCTAATATTATAACTAGTGACACTGAAACTGATGATGACGATAATGTTCCAATCTGCAAACTGAAAAGAATGCCTCTTCAGAAAACAAATCGTACACAAGTAAGTTTAGAATTGAACGATAGCCCTGCTACTTCTGTATGTGACAAAGTTGTGGATAGTGCAACCCCTACAAGGAGGCGTTTAGTGTCATTAAGAAATTGCTACGAGAAAGGAAGTGGAAAGAAAAATTCTTCAAGTCAGATCATTGAGATCAAAGATGGAATGAAGGATGTTGGGTCAGAGTATGAGACCGAGAGTGAAAGCTTGGATCAATTTATTGTTGACAGCTCTGATGTTTCGAATGTTGGAAGCTCTTCTCAGTCTGAAGATTTATCAAATGACAGTGAAGGATATGAGGAGATAATATCTAAGCTAGGGAGGAGAAAAAAAGAGTTGAAATGGGAGTATGAGGCTGATATGCTTGCAGCTTTTGGTAAGGATCCTGAATTGTGTATGAAGGCTGTGTGCGCTCTTTATCGACAGCAAACATCCGAGGAAAAAGTTAGTAAAGAATCGTTATTTTCTAACAAGAGAGGATTCAGCAAGTTTGATGCTGTCAAGTATGATTTCCAACCCAATCGACATGATTGATTTCTCTCTGTTTAGTACATAATAGGCACCTTTTTTCTTTTTATCATTTTGATTTCGAGCCATTGGTACAGACTCATTGCACTCTTTCTTGGATAAACATAAAAATTAACCCAGAAGATCTATATCTAAGAAGTTGGACACTGCAAAAAATGTTGCATTCGTTGTTGTAAAGTCTGTACGCGAAGAGAAGTGAGTTGATACCAAAATAAGTTTCATGATGAATTTTGCTGACTCTCTTTAATGTCTTTTACAGGGGCACTAGGTTGGCTGAGTTCCTCACTGACGGCGATCCGCAAGGCGATCTCAACAAATCTGTTAGAGAGTTGGAGGAGTATGACCCGAAGGCCGTTGACCTCTGCAGAAAGTTAGCAACACATTACTCCAAGCAGTTATTCGAGATATATGGAAATAAAGAAGATCCCTTCTTTTTACCAGCATGACATGATCTCATCGATTCCACGGCCAAACAAATGCATATGTAAGACTCAGCACCCTATGCTTGAAGAAACTCCAAAAAATGGTATTTTGTTGGAAAATAGCATAGAGCATGGTTATGTTGTTGTTAAGAGGAAAGCTATATTGATAGACCATAGTTGGTTGACATGTAACCTGTGGATCTCATCGTAAATTTTGTGTATATAGGATAATCATATATTTCTAGTCTATCTTGGTCTATGTTGTATATTCTGTACCCTTTATCGTAATTTCTTACAGAGAAAAATGAGGGCCTGTTTTGGAG CGGGTGAATAAAAATTAGAAAAAAAAAGAAAAAATTGGAAACGGACAATTCCCCAAGCATGGCGACACGAGTATGTTCCCGATCGCTCTTCAACTCTTCAGCACTTGGAGCAATTCGACCTTTTCTTAAACCCTAAATATCCAATTTACAATTTGATCGATATCATTTGATTTGTACGTATACGCTTCTCTGTCTTCTCTGTGCATTTCATTTTGTTCTATCCTGTTTGGTTCCCGAGAAAACCAGGGGAAGAAAAAGAAACTGAAAATGAAAGTAAATAAGTCTTTTTGGAAACTGGGAACTTGTGAAAATACATCCAATTTTGTTGGAGAGATTGGCCTCATATGAGTTCATTGAAACCCTGAAACTCAAACTTGTATTAATTTTGGAGGTGGGGTTGTTTGGAACTATTGTTCGGTGCTGTCTTGCTGAGGAAACAGAGAAAATGCTGGCAGAAGATGATTTCAACTTCTAAACTTATGTATTTCATTATGGTTTTGATCCCATTGTTTTTTTTTTTTTTTTTATATTTCAACTCAGGTATGCAACTGGAGATGGTTCTGGTGACTTAAAAACTTGTGGTGTTATTTGTTTCAGAGTTGATTTGTTTCTGTGCTTATTTTGGATGTGAAGATGGATGTGGAGGAAGGTAGACATAAAGTAGAACTAAGTGATGTATGTAAGTGCTGTGATTTGAAATTGAGGTGTGAAAGAGCTGAAGAAAAATGTGAAGACTTAGAATTGAAGATTCAGATAAAGAAAATCGAGTGTGAATTACTTCAAAGCCAATTGAAGAAATTGGAGTCAGAAAAGTCAGCAATCGAAGAAGAGCTAAAAGTTTGGATGGAGAAGGGTCGTGAACCTGGACAGCAGGTTAGTTGTGCTGAAGATGGAAAGAAGCTTTGTTTTGAGGAGGGAAAGAAAGGAGTTGTGAATTTAATTGATAAGAATGATGTGGAAGATGAGGTTGTTCAGCTTCTGATTGAGAATAATGTTTTGGCTGTTGAGAAGAAGAAGGCTGAAACTGAGGCTAAGATGTGGAAAGATAAGTTCAAAAAATTGGAGATTCAGATCTCGAAGTTGGATGAAAGTTTCGTTGTGAAATCTGACGAGCCAGTGCTTTCTGGGAGGTTTGAAGGGGGAATTGGATCACCATTGAGTCCCGAAGCTCACCTTTCGGATGGTGTAGCCTCTAACCATCATTCCCTTAGTAAAGAAATTAGAGACTTGCAAACAGGAACACCTCCAAATGGTTCACCACACATTCAAACTGTTTCCCTCGGGCGAGGGAAGAAATTCCGTTGTCTAGAATCTTATTTCAAGCATGGAAATCAAGTTAGAAAACAGTTGAATTTTGAAGAAGAGAGCCCCAGCAAAAAGATAGCCCCATTAACTCCAGCTGTTTCTAGACCTTTACATGGCATCATTAACATTGATGATAGTGATGATGAACTGATTATTGCCAAATTGCCCTCTTCTCATAATCAGAAAAAGAGTGAGGTCCGTGTTTCAGCAGCTCTAGATTTAAGTGGATGTGGATCTATTTGTTCCGAGGATAAAATACGCAATGTGGAAAATATGGAAGCTTTTAGTGATGGTTTTATCTTTAATTCAACACCCAAAAGGAAACGGGCTTCTAATATTATAACTAGTGACACTGAAACTGATGATGACGATAATGTTCCAATCTGCAAACTGAAAAGAATGCCTCTTCAGAAAACAAATCGTACACAAGTAAGTTTAGAATTGAACGATAGCCCTGCTACTTCTGTATGTGACAAAGTTGTGGATAGTGCAACCCCTACAAGGAGGCGTTTAGTGTCATTAAGAAATTGCTACGAGAAAGGAAGTGGAAAGAAAAATTCTTCAAGTCAGATCATTGAGATCAAAGATGGAATGAAGGATGTTGGGTCAGAGTATGAGACCGAGAGTGAAAGCTTGGATCAATTTATTGTTGACAGCTCTGATGTTTCGAATGTTGGAAGCTCTTCTCAGTCTGAAGATTTATCAAATGACAGTGAAGGATATGAGGAGATAATATCTAAGCTAGGGAGGAGAAAAAAAGAGTTGAAATGGGAGTATGAGGCTGATATGCTTGCAGCTTTTGGTAAGGATCCTGAATTGTGTATGAAGGCTGTGTGCGCTCTTTATCGACAGCAAACATCCGAGGAAAAAGTTAGTAAAGAATCGTTATTTTCTAACAAGAGAGGATTCAGCAAGTTTGATGCTGTCAAGTATGATTTCCAACCCAATCGACATGATTGATTTCTCTCTGTTTAGTACATAATAGGCACCTTTTTTCTTTTTATCATTTTGATTTCGAGCCATTGGTACAGACTCATTGCACTCTTTCTTGGATAAACATAAAAATTAACCCAGAAGATCTATATCTAAGAAGTTGGACACTGCAAAAAATGTTGCATTCGTTGTTGTAAAGTCTGTACGCGAAGAGAAGTGAGTTGATACCAAAATAAGTTTCATGATGAATTTTGCTGACTCTCTTTAATGTCTTTTACAGGGGCACTAGGTTGGCTGAGTTCCTCACTGACGGCGATCCGCAAGGCGATCTCAACAAATCTGTTAGAGAGTTGGAGGAGTATGACCCGAAGGCCGTTGACCTCTGCAGAAAGTTAGCAACACATTACTCCAAGCAGTTATTCGAGATATATGGAAATAAAGAAGATCCCTTCTTTTTACCAGCATGACATGATCTCATCGATTCCACGGCCAAACAAATGCATATGTAAGACTCAGCACCCTATGCTTGAAGAAACTCCAAAAAATGGTATTTTGTTGGAAAATAGCATAGAGCATGGTTATGTTGTTGTTAAGAGGAAAGCTATATTGATAGACCATAGTTGGTTGACATGTAACCTGTGGATCTCATCGTAAATTTTGTGTATATAGGATAATCATATATTTCTAGTCTATCTTGGTCTATGTTGTATATTCTGTACCCTTTATCGTAATTTCTTACAGAGAAAAATGAGGGCCTGTTTTGGAG ATGGATGTGGAGGAAGGTAGACATAAAGTAGAACTAAGTGATGTATGTAAGTGCTGTGATTTGAAATTGAGGTGTGAAAGAGCTGAAGAAAAATGTGAAGACTTAGAATTGAAGATTCAGATAAAGAAAATCGAGTGTGAATTACTTCAAAGCCAATTGAAGAAATTGGAGTCAGAAAAGTCAGCAATCGAAGAAGAGCTAAAAGTTTGGATGGAGAAGGGTCGTGAACCTGGACAGCAGGTTAGTTGTGCTGAAGATGGAAAGAAGCTTTGTTTTGAGGAGGGAAAGAAAGGAGTTGTGAATTTAATTGATAAGAATGATGTGGAAGATGAGGTTGTTCAGCTTCTGATTGAGAATAATGTTTTGGCTGTTGAGAAGAAGAAGGCTGAAACTGAGGCTAAGATGTGGAAAGATAAGTTCAAAAAATTGGAGATTCAGATCTCGAAGTTGGATGAAAGTTTCGTTGTGAAATCTGACGAGCCAGTGCTTTCTGGGAGGTTTGAAGGGGGAATTGGATCACCATTGAGTCCCGAAGCTCACCTTTCGGATGGTGTAGCCTCTAACCATCATTCCCTTAGTAAAGAAATTAGAGACTTGCAAACAGGAACACCTCCAAATGGTTCACCACACATTCAAACTGTTTCCCTCGGGCGAGGGAAGAAATTCCGTTGTCTAGAATCTTATTTCAAGCATGGAAATCAAGTTAGAAAACAGTTGAATTTTGAAGAAGAGAGCCCCAGCAAAAAGATAGCCCCATTAACTCCAGCTGTTTCTAGACCTTTACATGGCATCATTAACATTGATGATAGTGATGATGAACTGATTATTGCCAAATTGCCCTCTTCTCATAATCAGAAAAAGAGTGAGGTCCGTGTTTCAGCAGCTCTAGATTTAAGTGGATGTGGATCTATTTGTTCCGAGGATAAAATACGCAATGTGGAAAATATGGAAGCTTTTAGTGATGGTTTTATCTTTAATTCAACACCCAAAAGGAAACGGGCTTCTAATATTATAACTAGTGACACTGAAACTGATGATGACGATAATGTTCCAATCTGCAAACTGAAAAGAATGCCTCTTCAGAAAACAAATCGTACACAAGTAAGTTTAGAATTGAACGATAGCCCTGCTACTTCTGTATGTGACAAAGTTGTGGATAGTGCAACCCCTACAAGGAGGCGTTTAGTGTCATTAAGAAATTGCTACGAGAAAGGAAGTGGAAAGAAAAATTCTTCAAGTCAGATCATTGAGATCAAAGATGGAATGAAGGATGTTGGGTCAGAGTATGAGACCGAGAGTGAAAGCTTGGATCAATTTATTGTTGACAGCTCTGATGTTTCGAATGTTGGAAGCTCTTCTCAGTCTGAAGATTTATCAAATGACAGTGAAGGATATGAGGAGATAATATCTAAGCTAGGGAGGAGAAAAAAAGAGTTGAAATGGGAGTATGAGGCTGATATGCTTGCAGCTTTTGGTAAGGATCCTGAATTGTGTATGAAGGCTGTGTGCGCTCTTTATCGACAGCAAACATCCGAGGAAAAAGTTAGTAAAGAATCGTTATTTTCTAACAAGAGAGGATTCAGCAAGTTTGATGCTGTCAAGTATGATTTCCAACCCAATCGACATGATTGA MDVEEGRHKVELSDVCKCCDLKLRCERAEEKCEDLELKIQIKKIECELLQSQLKKLESEKSAIEEELKVWMEKGREPGQQVSCAEDGKKLCFEEGKKGVVNLIDKNDVEDEVVQLLIENNVLAVEKKKAETEAKMWKDKFKKLEIQISKLDESFVVKSDEPVLSGRFEGGIGSPLSPEAHLSDGVASNHHSLSKEIRDLQTGTPPNGSPHIQTVSLGRGKKFRCLESYFKHGNQVRKQLNFEEESPSKKIAPLTPAVSRPLHGIINIDDSDDELIIAKLPSSHNQKKSEVRVSAALDLSGCGSICSEDKIRNVENMEAFSDGFIFNSTPKRKRASNIITSDTETDDDDNVPICKLKRMPLQKTNRTQVSLELNDSPATSVCDKVVDSATPTRRRLVSLRNCYEKGSGKKNSSSQIIEIKDGMKDVGSEYETESESLDQFIVDSSDVSNVGSSSQSEDLSNDSEGYEEIISKLGRRKKELKWEYEADMLAAFGKDPELCMKAVCALYRQQTSEEKVSKESLFSNKRGFSKFDAVKYDFQPNRHD Homology
BLAST of Tan0008147.5 vs. NCBI nr
Match: KAG7013293.1 (hypothetical protein SDJN02_26052 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 831.6 bits (2147), Expect = 3.8e-237 Identity = 450/552 (81.52%), Postives = 479/552 (86.78%), Query Frame = 0
BLAST of Tan0008147.5 vs. NCBI nr
Match: KAG6574225.1 (hypothetical protein SDJN03_28112, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 828.2 bits (2138), Expect = 4.2e-236 Identity = 448/552 (81.16%), Postives = 478/552 (86.59%), Query Frame = 0
BLAST of Tan0008147.5 vs. NCBI nr
Match: XP_023541890.1 (uncharacterized protein LOC111801900 [Cucurbita pepo subsp. pepo] >XP_023541891.1 uncharacterized protein LOC111801900 [Cucurbita pepo subsp. pepo] >XP_023541893.1 uncharacterized protein LOC111801900 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 825.1 bits (2130), Expect = 3.6e-235 Identity = 449/552 (81.34%), Postives = 479/552 (86.78%), Query Frame = 0
BLAST of Tan0008147.5 vs. NCBI nr
Match: XP_022968211.1 (uncharacterized protein LOC111467515 [Cucurbita maxima]) HSP 1 Score: 818.1 bits (2112), Expect = 4.4e-233 Identity = 442/556 (79.50%), Postives = 476/556 (85.61%), Query Frame = 0
BLAST of Tan0008147.5 vs. NCBI nr
Match: XP_022945182.1 (uncharacterized protein LOC111449502 [Cucurbita moschata]) HSP 1 Score: 793.9 bits (2049), Expect = 8.8e-226 Identity = 438/552 (79.35%), Postives = 466/552 (84.42%), Query Frame = 0
BLAST of Tan0008147.5 vs. ExPASy TrEMBL
Match: A0A6J1HU91 (uncharacterized protein LOC111467515 OS=Cucurbita maxima OX=3661 GN=LOC111467515 PE=4 SV=1) HSP 1 Score: 818.1 bits (2112), Expect = 2.1e-233 Identity = 442/556 (79.50%), Postives = 476/556 (85.61%), Query Frame = 0
BLAST of Tan0008147.5 vs. ExPASy TrEMBL
Match: A0A6J1G076 (uncharacterized protein LOC111449502 OS=Cucurbita moschata OX=3662 GN=LOC111449502 PE=4 SV=1) HSP 1 Score: 793.9 bits (2049), Expect = 4.3e-226 Identity = 438/552 (79.35%), Postives = 466/552 (84.42%), Query Frame = 0
BLAST of Tan0008147.5 vs. ExPASy TrEMBL
Match: A0A6J1CI11 (uncharacterized protein LOC111011687 OS=Momordica charantia OX=3673 GN=LOC111011687 PE=4 SV=1) HSP 1 Score: 765.8 bits (1976), Expect = 1.2e-217 Identity = 413/552 (74.82%), Postives = 466/552 (84.42%), Query Frame = 0
BLAST of Tan0008147.5 vs. ExPASy TrEMBL
Match: A0A1S3CNR9 (uncharacterized protein LOC103503017 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503017 PE=4 SV=1) HSP 1 Score: 689.9 bits (1779), Expect = 8.7e-195 Identity = 382/558 (68.46%), Postives = 443/558 (79.39%), Query Frame = 0
BLAST of Tan0008147.5 vs. ExPASy TrEMBL
Match: A0A5A7UA97 (Protein IWS1-like protein A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00740 PE=4 SV=1) HSP 1 Score: 681.8 bits (1758), Expect = 2.4e-192 Identity = 382/558 (68.46%), Postives = 440/558 (78.85%), Query Frame = 0
BLAST of Tan0008147.5 vs. TAIR 10
Match: AT5G53220.1 (unknown protein; Has 3099 Blast hits to 2528 proteins in 332 species: Archae - 2; Bacteria - 245; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink). ) HSP 1 Score: 118.6 bits (296), Expect = 1.5e-26 Identity = 104/295 (35.25%), Postives = 159/295 (53.90%), Query Frame = 0
BLAST of Tan0008147.5 vs. TAIR 10
Match: AT5G53220.2 (unknown protein; Has 3081 Blast hits to 2526 proteins in 331 species: Archae - 2; Bacteria - 227; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink). ) HSP 1 Score: 118.6 bits (296), Expect = 1.5e-26 Identity = 104/295 (35.25%), Postives = 159/295 (53.90%), Query Frame = 0
BLAST of Tan0008147.5 vs. TAIR 10
Match: AT5G53220.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 118.6 bits (296), Expect = 1.5e-26 Identity = 104/295 (35.25%), Postives = 159/295 (53.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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