Tan0007651.1 (mRNA) Snake gourd v1

Overview


Name	Tan0007651.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Plant self-incompatibility protein S1 family
Location	LG06: 75323978 .. 75324439 (+)
Sequence length	462
RNA-Seq Expression	Tan0007651.1
Synteny	Tan0007651.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGTATACTCGTCTCTCTTTCTCTTTTATTTTGAAAATATGGGACGATTATTTTCAACCTTTATATTGTCTCTGTTAATTTCGATATTTTTTGCTAGCCTATTTACTACGGAAGGATTCTTTGATTCACCAACGGTTACAGTCAACATAACAAATGTTCTGGGAAGTCGCAGTCAACTCACAATCCATTGCAAATCCGGCGACGATGATTTGGGAATTCACCAGCTACCATATTTGACCAACTATGACTTCAATTTTCGACCAAACTTCTTTGGTACAACGTTGTTCTACTGCAGCTTTCAGTGGCCTGACTCATTTTATTACTTCGAGATTTACAATTTTAAAAGAGACAAAAGACTTTGCACAGAATGTTTCTGGATCGTGCGGGAAAAAAGTATCTGTTTGTTCAATGATGACACCAGCAAATATGATATTTGCTATACGTGGCCGCCTAAATAA

mRNA sequence

ATGTGGGTATACTCGTCTCTCTTTCTCTTTTATTTTGAAAATATGGGACGATTATTTTCAACCTTTATATTGTCTCTGTTAATTTCGATATTTTTTGCTAGCCTATTTACTACGGAAGGATTCTTTGATTCACCAACGGTTACAGTCAACATAACAAATGTTCTGGGAAGTCGCAGTCAACTCACAATCCATTGCAAATCCGGCGACGATGATTTGGGAATTCACCAGCTACCATATTTGACCAACTATGACTTCAATTTTCGACCAAACTTCTTTGGTACAACGTTGTTCTACTGCAGCTTTCAGTGGCCTGACTCATTTTATTACTTCGAGATTTACAATTTTAAAAGAGACAAAAGACTTTGCACAGAATGTTTCTGGATCGTGCGGGAAAAAAGTATCTGTTTGTTCAATGATGACACCAGCAAATATGATATTTGCTATACGTGGCCGCCTAAATAA

Coding sequence (CDS)

ATGTGGGTATACTCGTCTCTCTTTCTCTTTTATTTTGAAAATATGGGACGATTATTTTCAACCTTTATATTGTCTCTGTTAATTTCGATATTTTTTGCTAGCCTATTTACTACGGAAGGATTCTTTGATTCACCAACGGTTACAGTCAACATAACAAATGTTCTGGGAAGTCGCAGTCAACTCACAATCCATTGCAAATCCGGCGACGATGATTTGGGAATTCACCAGCTACCATATTTGACCAACTATGACTTCAATTTTCGACCAAACTTCTTTGGTACAACGTTGTTCTACTGCAGCTTTCAGTGGCCTGACTCATTTTATTACTTCGAGATTTACAATTTTAAAAGAGACAAAAGACTTTGCACAGAATGTTTCTGGATCGTGCGGGAAAAAAGTATCTGTTTGTTCAATGATGACACCAGCAAATATGATATTTGCTATACGTGGCCGCCTAAATAA

Protein sequence

MWVYSSLFLFYFENMGRLFSTFILSLLISIFFASLFTTEGFFDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPYLTNYDFNFRPNFFGTTLFYCSFQWPDSFYYFEIYNFKRDKRLCTECFWIVREKSICLFNDDTSKYDICYTWPPK

Homology

[Close]

BLAST of Tan0007651.1 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-20
Identity = 49/119 (41.18%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 37  TTEGFFDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPYLTNYDFNFRPNFFGTTL 96
           +T   F +   TV I N LG++  L  HCKS DDDLG   L    ++ F+F   FFG TL
Sbjct: 38  STNSVFPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTL 97

Query: 97  FYCSFQWPDSFYYFEIYNFKRD-----KRLCTECFWIVREKSICLFNDDTSKYDICYTW 151
           ++CSF WP+  + F+IY   RD     K     C W +R    C FND+T ++D+CY W
Sbjct: 98  YFCSFSWPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Tan0007651.1 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.2e-19
Identity = 50/127 (39.37%), Postives = 69/127 (54.33%), Query Frame = 0


Query: 28  ISIFFASLFTTEGFFDSP----TVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPYLTNY 87
           I  FF  L    G+   P       V +TN++G    LTIHCKS  DDLGIH +P+   Y
Sbjct: 6   IVCFFFFLLFGSGYGGLPPFWRATVVTMTNLIGG-PPLTIHCKSKQDDLGIHVVPFKQEY 65

Query: 88  DFNFRPNFFGTTLFYCSFQWPDSFYYFEIYNFKRDKRLCTECFWIVREKSICLFNDDTSK 147
            F F+PN + +TLF+CSFQW   F  F+IY+ +RD+ +C +C W ++    C       K
Sbjct: 66  HFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQGICDDCQWEIKPDGPCRL----GK 125

Query: 148 YDICYTW 151
              C+ W
Sbjct: 126 KAKCFPW 127

[Close]

BLAST of Tan0007651.1 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18
Identity = 51/132 (38.64%), Postives = 70/132 (53.03%), Query Frame = 0


Query: 23  ILSLLISIFFASLFTTEGFFDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPYLTN 82
           ++ LLI I F+ + T      S +  V ITN LG    L +HCKS DDDLG+  L    +
Sbjct: 13  VIYLLIKIAFSQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLGLKILAPNGS 72

Query: 83  YDFNFRPNFFGTTLFYCSFQWPDSFYYFEIYNFKRD----KRLCTECFWIVREKSICLFN 142
           + F FR +  GTTLFYC F WP     F+IY+  RD       C  C W +  +  C+F+
Sbjct: 73  WSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCMFS 132

Query: 143 DDTSKYDICYTW 151
           +    ++ICY W
Sbjct: 133 ESDHAFNICYDW 144

[Close]

BLAST of Tan0007651.1 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.0e-17
Identity = 46/131 (35.11%), Postives = 70/131 (53.44%), Query Frame = 0


Query: 20  STFILSLLISIFFASLFTTEGFFDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPY 79
           S+ I  +L  I F  + +  G+       V +TN +  ++ LTI C+S DDDLG H L +
Sbjct: 4   SSKIFVVLSIILFYVISSCHGYNPFAKTVVTVTNNISPQTTLTISCRSKDDDLGEHLLLH 63

Query: 80  LTNYDFNFRPNFFGTTLFYCSFQWPDSFYYFEIYNFKRDKRLCTECFWIVREKSICLFND 139
              + + FRP++F TTLF C F W ++  +F+ Y   RD+  C  C W +   S C+  +
Sbjct: 64  GQAFLWKFRPSWFRTTLFTCKFLWNNNVKWFDTYRSDRDQGHCYSCNWSINADSACISGN 123

Query: 140 DTSKYDICYTW 151
              K+D CY W
Sbjct: 124 FNKKFDRCYPW 134

[Close]

BLAST of Tan0007651.1 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.7e-15
Identity = 50/134 (37.31%), Postives = 71/134 (52.99%), Query Frame = 0


Query: 23  ILSLLISIFFASLFTTEGF-FDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPYLT 82
           ++ LLI I F+ +       + +    V ITN LG  S L +HCKS DDDLG+  L    
Sbjct: 13  VIYLLIQIAFSQVKPGSDLKWSTLKSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNG 72

Query: 83  NYDFNFRPNFF-GTTLFYCSFQWPDSFYYFEIYNFKRD-KRL---CTECFWIVREKSICL 142
           ++ F FRP+   G TLF+C F WP    +F IY+  RD  R+   C  C W + +   C 
Sbjct: 73  SWSFKFRPSIVPGVTLFFCHFTWPGQSKWFNIYDDDRDGVRMGIPCIYCIWDIGKYGPCR 132

Query: 143 FNDDTSKYDICYTW 151
           F++    ++ICY W
Sbjct: 133 FSEIDDAFNICYDW 146

[Close]

BLAST of Tan0007651.1 vs. NCBI nr
Match: KGN61530.1 (hypothetical protein Csa_006387 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 8.7e-38
Identity = 88/152 (57.89%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 3   VYSSLFLFYFENMGRLFSTFILSLLISIFFASLFTTEGF-FDSPTVTVNITNVLGS-RSQ 62
           VYS  F          FSTF LSL IS+ FA++FT EG  F SP VTVNITN L    +Q
Sbjct: 29  VYSLSFSLLISKKMSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQ 88

Query: 63  LTIHCKSGDDDLGIHQLPYLTNYDFNFRPNFFGTTLFYCSFQWPDSFYYFEIYNFKRDKR 122
           LTIHCKSGDDDLG+HQL +L +Y FNFRPNF+G+TLFYC+F W  S +YF IY   RD+ 
Sbjct: 89  LTIHCKSGDDDLGVHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSSHYFNIYQDLRDRA 148

Query: 123 LC--TECFWIVREKSICLFNDDTSKYDICYTW 151
            C  T C WIV E+ +C+F+  T+ YDICYTW
Sbjct: 149 KCNDTLCLWIVGEQGLCMFDYKTNAYDICYTW 180

[Close]

BLAST of Tan0007651.1 vs. NCBI nr
Match: XP_022138779.1 (S-protein homolog 5 [Momordica charantia])

HSP 1 Score: 166.8 bits (421), Expect = 1.5e-37
Identity = 81/132 (61.36%), Postives = 97/132 (73.48%), Query Frame = 0


Query: 25  SLLISIFFASLFTT-----EGFFDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPY 84
           SL++S+ F  LF+T     E    S   +VNITN+L S  QLT+HCKS DDDLG HQLP 
Sbjct: 8   SLVLSLSFLVLFSTICVNVEAL--SARASVNITNILESHQQLTVHCKSKDDDLGFHQLPP 67

Query: 85  LTNYDFNFRPNFFGTTLFYCSFQWPDSFYYFEIYNFKRDKRLCTECFWIVREKSICLFND 144
           L +Y F+FRPN + +TLF+CSFQWP SF+YFEIYN KRD+ LCT C WIV EK +CL+N 
Sbjct: 68  LISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCTLCLWIVGEKGLCLYNS 127

Query: 145 DTSKYDICYTWP 152
            T KYDICYTWP
Sbjct: 128 KTLKYDICYTWP 137

[Close]

BLAST of Tan0007651.1 vs. NCBI nr
Match: XP_008465559.1 (PREDICTED: pumilio homolog 15-like, partial [Cucumis melo])

HSP 1 Score: 152.1 bits (383), Expect = 3.8e-33
Identity = 73/121 (60.33%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 35  LFTTEGF-FDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPYLTNYDFNFRPNFFG 94
           LFT EG  F +P VTVNITN L  + QLT+HCKSGDDDLGIHQL  L  Y F FRPNF G
Sbjct: 1   LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIG 60

Query: 95  TTLFYCSFQWPDSFYYFEIYNFKRDKRLCTE-CFWIVREKSICLFNDDTSKYDICYTWPP 154
           TTLFYC+FQWP   + F+IY   RD+  C   C WIV E+ +C+F+  T KYD CYTW  
Sbjct: 61  TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD 120

[Close]

BLAST of Tan0007651.1 vs. NCBI nr
Match: XP_008460739.1 (PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo])

HSP 1 Score: 149.4 bits (376), Expect = 2.5e-32
Identity = 65/108 (60.19%), Postives = 79/108 (73.15%), Query Frame = 0


Query: 47  VTVNITN-VLGSRSQLTIHCKSGDDDLGIHQLPYLTNYDFNFRPNFFGTTLFYCSFQWPD 106
           +TVNITN + G  +QLT+HCKSGDDDLG+H+LP+L +Y F FRPNF+G+TLFYC FQW  
Sbjct: 1   MTVNITNEISGVNNQLTVHCKSGDDDLGVHKLPHLVSYTFTFRPNFWGSTLFYCKFQWSS 60

Query: 107 SFYYFEIYNFKRDKRLC--TECFWIVREKSICLFNDDTSKYDICYTWP 152
             +YF+IY   RD   C  T C WI+ EK IC+FN DT  YD CY WP
Sbjct: 61  WLHYFDIYKDSRDNLRCNQTLCLWIISEKGICMFNYDTKNYDYCYAWP 108

[Close]

BLAST of Tan0007651.1 vs. NCBI nr
Match: XP_022975612.1 (S-protein homolog 3-like, partial [Cucurbita maxima])

HSP 1 Score: 138.7 bits (348), Expect = 4.3e-29
Identity = 68/111 (61.26%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 28  ISIFFASLFTT--EGFFDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPYLTNYDF 87
           +S+FF +LFTT  E  F  P +TVNITNVL S +QLT+HCKSGDDDLGIHQLPYL  Y F
Sbjct: 1   MSLFFTTLFTTIDESIFKDPPITVNITNVLESHNQLTVHCKSGDDDLGIHQLPYLGGYAF 60

Query: 88  NFRPNFFGTTLFYCSFQWPDSFYYFEIYNFKRDKRLC--TECFWIVREKSI 135
            FRPNF+G+T FYC+FQWP    YF+IY   RD+  C  T C WIV ++ I
Sbjct: 61  TFRPNFWGSTQFYCTFQWPGFSQYFDIYKDYRDRIKCNKTLCLWIVGKQGI 111

[Close]

BLAST of Tan0007651.1 vs. ExPASy TrEMBL
Match: A0A0A0LI28 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 4.2e-38
Identity = 88/152 (57.89%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 3   VYSSLFLFYFENMGRLFSTFILSLLISIFFASLFTTEGF-FDSPTVTVNITNVLGS-RSQ 62
           VYS  F          FSTF LSL IS+ FA++FT EG  F SP VTVNITN L    +Q
Sbjct: 29  VYSLSFSLLISKKMSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQ 88

Query: 63  LTIHCKSGDDDLGIHQLPYLTNYDFNFRPNFFGTTLFYCSFQWPDSFYYFEIYNFKRDKR 122
           LTIHCKSGDDDLG+HQL +L +Y FNFRPNF+G+TLFYC+F W  S +YF IY   RD+ 
Sbjct: 89  LTIHCKSGDDDLGVHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSSHYFNIYQDLRDRA 148

Query: 123 LC--TECFWIVREKSICLFNDDTSKYDICYTW 151
            C  T C WIV E+ +C+F+  T+ YDICYTW
Sbjct: 149 KCNDTLCLWIVGEQGLCMFDYKTNAYDICYTW 180

[Close]

BLAST of Tan0007651.1 vs. ExPASy TrEMBL
Match: A0A6J1CB24 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111009858 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 7.2e-38
Identity = 81/132 (61.36%), Postives = 97/132 (73.48%), Query Frame = 0


Query: 25  SLLISIFFASLFTT-----EGFFDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPY 84
           SL++S+ F  LF+T     E    S   +VNITN+L S  QLT+HCKS DDDLG HQLP 
Sbjct: 8   SLVLSLSFLVLFSTICVNVEAL--SARASVNITNILESHQQLTVHCKSKDDDLGFHQLPP 67

Query: 85  LTNYDFNFRPNFFGTTLFYCSFQWPDSFYYFEIYNFKRDKRLCTECFWIVREKSICLFND 144
           L +Y F+FRPN + +TLF+CSFQWP SF+YFEIYN KRD+ LCT C WIV EK +CL+N 
Sbjct: 68  LISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCTLCLWIVGEKGLCLYNS 127

Query: 145 DTSKYDICYTWP 152
            T KYDICYTWP
Sbjct: 128 KTLKYDICYTWP 137

[Close]

BLAST of Tan0007651.1 vs. ExPASy TrEMBL
Match: A0A1S3CP53 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.8e-33
Identity = 73/121 (60.33%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 35  LFTTEGF-FDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPYLTNYDFNFRPNFFG 94
           LFT EG  F +P VTVNITN L  + QLT+HCKSGDDDLGIHQL  L  Y F FRPNF G
Sbjct: 1   LFTIEGKPFQNPLVTVNITNALTHKDQLTVHCKSGDDDLGIHQLQPLGGYAFTFRPNFIG 60

Query: 95  TTLFYCSFQWPDSFYYFEIYNFKRDKRLCTE-CFWIVREKSICLFNDDTSKYDICYTWPP 154
           TTLFYC+FQWP   + F+IY   RD+  C   C WIV E+ +C+F+  T KYD CYTW  
Sbjct: 61  TTLFYCTFQWPGWSHSFDIYKDSRDRDRCNGLCLWIVGEQGVCMFHYVTKKYDFCYTWVD 120

[Close]

BLAST of Tan0007651.1 vs. ExPASy TrEMBL
Match: A0A1S3CDK4 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499501 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 65/108 (60.19%), Postives = 79/108 (73.15%), Query Frame = 0


Query: 47  VTVNITN-VLGSRSQLTIHCKSGDDDLGIHQLPYLTNYDFNFRPNFFGTTLFYCSFQWPD 106
           +TVNITN + G  +QLT+HCKSGDDDLG+H+LP+L +Y F FRPNF+G+TLFYC FQW  
Sbjct: 1   MTVNITNEISGVNNQLTVHCKSGDDDLGVHKLPHLVSYTFTFRPNFWGSTLFYCKFQWSS 60

Query: 107 SFYYFEIYNFKRDKRLC--TECFWIVREKSICLFNDDTSKYDICYTWP 152
             +YF+IY   RD   C  T C WI+ EK IC+FN DT  YD CY WP
Sbjct: 61  WLHYFDIYKDSRDNLRCNQTLCLWIISEKGICMFNYDTKNYDYCYAWP 108

[Close]

BLAST of Tan0007651.1 vs. ExPASy TrEMBL
Match: A0A6J1IDI1 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111475257 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.1e-29
Identity = 68/111 (61.26%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 28  ISIFFASLFTT--EGFFDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPYLTNYDF 87
           +S+FF +LFTT  E  F  P +TVNITNVL S +QLT+HCKSGDDDLGIHQLPYL  Y F
Sbjct: 1   MSLFFTTLFTTIDESIFKDPPITVNITNVLESHNQLTVHCKSGDDDLGIHQLPYLGGYAF 60

Query: 88  NFRPNFFGTTLFYCSFQWPDSFYYFEIYNFKRDKRLC--TECFWIVREKSI 135
            FRPNF+G+T FYC+FQWP    YF+IY   RD+  C  T C WIV ++ I
Sbjct: 61  TFRPNFWGSTQFYCTFQWPGFSQYFDIYKDYRDRIKCNKTLCLWIVGKQGI 111

[Close]

BLAST of Tan0007651.1 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 101.3 bits (251), Expect = 7.1e-22
Identity = 49/119 (41.18%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 37  TTEGFFDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPYLTNYDFNFRPNFFGTTL 96
           +T   F +   TV I N LG++  L  HCKS DDDLG   L    ++ F+F   FFG TL
Sbjct: 38  STNSVFPTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTL 97

Query: 97  FYCSFQWPDSFYYFEIYNFKRD-----KRLCTECFWIVREKSICLFNDDTSKYDICYTW 151
           ++CSF WP+  + F+IY   RD     K     C W +R    C FND+T ++D+CY W
Sbjct: 98  YFCSFSWPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Tan0007651.1 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 96.7 bits (239), Expect = 1.8e-20
Identity = 44/113 (38.94%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 42  FDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPYLTNYDFNFRPNFFGTTLFYCSF 101
           FD+P  TV I N LG    L  HCKS +DDLG   +     + F FRP+ FG TLF+C F
Sbjct: 23  FDNPRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGF 82

Query: 102 QWPDSFYYFEIYNFKRDKRL----CTECFWIVREKSICLFNDDTSKYDICYTW 151
            W    ++F+IY   RD+      C  C W +R+   C  N +++ +D+C  W
Sbjct: 83  IWDKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLNKNSNMFDVCLPW 135

[Close]

BLAST of Tan0007651.1 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 95.1 bits (235), Expect = 5.1e-20
Identity = 50/127 (39.37%), Postives = 69/127 (54.33%), Query Frame = 0


Query: 28  ISIFFASLFTTEGFFDSP----TVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPYLTNY 87
           I  FF  L    G+   P       V +TN++G    LTIHCKS  DDLGIH +P+   Y
Sbjct: 6   IVCFFFFLLFGSGYGGLPPFWRATVVTMTNLIGG-PPLTIHCKSKQDDLGIHVVPFKQEY 65

Query: 88  DFNFRPNFFGTTLFYCSFQWPDSFYYFEIYNFKRDKRLCTECFWIVREKSICLFNDDTSK 147
            F F+PN + +TLF+CSFQW   F  F+IY+ +RD+ +C +C W ++    C       K
Sbjct: 66  HFKFQPNLWKSTLFFCSFQWDSQFKSFDIYDAQRDQGICDDCQWEIKPDGPCRL----GK 125

Query: 148 YDICYTW 151
              C+ W
Sbjct: 126 KAKCFPW 127

[Close]

BLAST of Tan0007651.1 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 94.4 bits (233), Expect = 8.7e-20
Identity = 51/132 (38.64%), Postives = 70/132 (53.03%), Query Frame = 0


Query: 23  ILSLLISIFFASLFTTEGFFDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPYLTN 82
           ++ LLI I F+ + T      S +  V ITN LG    L +HCKS DDDLG+  L    +
Sbjct: 13  VIYLLIKIAFSQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDLGLKILAPNGS 72

Query: 83  YDFNFRPNFFGTTLFYCSFQWPDSFYYFEIYNFKRD----KRLCTECFWIVREKSICLFN 142
           + F FR +  GTTLFYC F WP     F+IY+  RD       C  C W +  +  C+F+
Sbjct: 73  WSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCINCIWDISIQGPCMFS 132

Query: 143 DDTSKYDICYTW 151
           +    ++ICY W
Sbjct: 133 ESDHAFNICYDW 144

[Close]

BLAST of Tan0007651.1 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 90.9 bits (224), Expect = 9.6e-19
Identity = 46/125 (36.80%), Postives = 61/125 (48.80%), Query Frame = 0


Query: 30  IFFASLFTTEGFFDSPTVTVNITNVLGSRSQLTIHCKSGDDDLGIHQLPYLTNYDFNFRP 89
           +FF  +          + +V I N LG    L  HCKS +DDLG   L    ++ F F P
Sbjct: 9   LFFVMVMFMSAIMSRASTSVVIYNDLGGGLPLRHHCKSREDDLGYQSLAPGRSWSFGFTP 68

Query: 90  NFFGTTLFYCSFQWPDSFYYFEIYNFKRDKRL----CTECFWIVREKSICLFNDDTSKYD 149
           + FG TLFYC F W    + F+IY   RDK      C +C W +R+   C F   T  +D
Sbjct: 69  DIFGRTLFYCRFSWGAESHIFDIYKQSRDKEFQEFGCKKCEWKIRKNGPCKFYKKTGMFD 128

Query: 150 ICYTW 151
            CY+W
Sbjct: 129 HCYSW 133

The following BLAST results are available for this feature:

BLAST of Tan0007651.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLQ5	1.0e-20	41.18	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
O23020	7.2e-19	39.37	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
Q9FMQ4	1.2e-18	38.64	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
P0DN93	3.0e-17	35.11	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
F4JZG1	1.7e-15	37.31	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]

BLAST of Tan0007651.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61530.1	8.7e-38	57.89	hypothetical protein Csa_006387 [Cucumis sativus]	[more]
XP_022138779.1	1.5e-37	61.36	S-protein homolog 5 [Momordica charantia]	[more]
XP_008465559.1	3.8e-33	60.33	PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]	[more]
XP_008460739.1	2.5e-32	60.19	PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]	[more]
XP_022975612.1	4.3e-29	61.26	S-protein homolog 3-like, partial [Cucurbita maxima]	[more]

BLAST of Tan0007651.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI28	4.2e-38	57.89	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G162130 PE=3 SV=1	[more]
A0A6J1CB24	7.2e-38	61.36	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111009858 PE=3 SV=1	[more]
A0A1S3CP53	1.8e-33	60.33	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103503190 PE=3 SV=1	[more]
A0A1S3CDK4	1.2e-32	60.19	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499501 PE=3 SV=1	[more]
A0A6J1IDI1	2.1e-29	61.26	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111475257 PE=3 SV=1	[more]

BLAST of Tan0007651.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16195.1	7.1e-22	41.18	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	1.8e-20	38.94	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	5.1e-20	39.37	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	8.7e-20	38.64	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	9.6e-19	36.80	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 48..150 e-value: 9.3E-31 score: 106.5
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 24..150
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 24..150

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0007651	Tan0007651	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0007651.1-exon	Tan0007651.1-exon-LG06:75323978..75324439	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0007651.1-cds	Tan0007651.1-cds-LG06:75323978..75324439	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0007651.1	Tan0007651.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity