Tan0005413.1 (mRNA) Snake gourd v1

Overview


Name	Tan0005413.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	indole-3-acetic acid-induced protein ARG2-like
Location	LG06: 6616933 .. 6618094 (-)
Sequence length	1045
RNA-Seq Expression	Tan0005413.1
Synteny	Tan0005413.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCATCTCCATTTCCAAAAGAAAATAACAACTGCTTCACTCATACAGAAAAAGCTCGAGCCAGTCCTCTGAGAATTTTCTCTTCGCTGCGGTGGAAGATTTTCTCGAGAAACAAACAGCGAGAAACAATCTTCTTCCGAAGGAAATCTTTCTCCACCGGCAGCAGCGTTTTTGAGTTTGATTGATTGCTTTTGTATTCGTTTCCAATGGCTCGCTCTTTCTCCAACGTTAAGGTCCTTTCCGCTCTCGTTGCCGATGGATTCTCTTCCGCTCTCAGCAGGTACTTCCTCTCCTTCCTCTTATTTTTCGTTTTTCTTGGATCTCTGTCTCGATTTAAGTGTTTTTTTGTTTTGATGTTAATGTTTGTTCTGATTGTTGTTGCTGTTTGTTTGTTTAGGCGTGGTTATGCGGCGGCTTCGCAAGGAGTTGCGTCTAGTGCGGTTAAAGCAGGAAGCGTCGCAGCGGCGAGGAACAGTCATCTGTTGAAGAAATCGGGAGAGGAGAAGGTTGTTGGATCATCTGAGAAGGTTTCTTGGGTGCCGGATCCTGTTACGGGATATTACCGACCGGAGAATCGCGCCGATGAGATCGATGTTGCCGAACTTCGATCGATTCTTCTTAAGAACAAGAACTGAACGTATTTTCTCAAAAATGAATTGAAAAAAAAGTTAAATAAAAAAATCTAAAGCGAAAAGAGGCCTTCGGGCTTCGGATCGAAATTGAAAGAGGATTGGATCGGGCGAGAGCGTTGAATTTGTGAAGCAGTTTGGGGATTTGGAAACAAGCTCTAGGGCTTGATCGGCGATTTCCGTTTAGATGTTAAGTTTCTTCCTATTATACTCTGTATTTAGGATTTGATTGTTTTCTGTGAACTGTAATAGTAAAATACACAATGAATGATGAATCCAATAGGCATTTCTTGCCTTTGGTTTCTGTTCTTCGTTCTTCAAATTCCTCTTTTTTTTTTTTTTCTTTCTATTTTTCTTTTTCAGCGATAAAATTTAAGGCAAATGAAAAGTTGGAATCAAATCAAGCGTTTTGGAATTTGTGGTGATGAGATGAAACTGTTCAATATCGAAACATTTCGTATCGTAATGATGTTTATTGATTTTTTTTAAAAACTGAATTCACGCGCAACCTATTTTCGAGAAGAGTGGAAATT

mRNA sequence

CCTCATCTCCATTTCCAAAAGAAAATAACAACTGCTTCACTCATACAGAAAAAGCTCGAGCCAGTCCTCTGAGAATTTTCTCTTCGCTGCGGTGGAAGATTTTCTCGAGAAACAAACAGCGAGAAACAATCTTCTTCCGAAGGAAATCTTTCTCCACCGGCAGCAGCGTTTTTGAGTTTGATTGATTGCTTTTGTATTCGTTTCCAATGGCTCGCTCTTTCTCCAACGTTAAGGTCCTTTCCGCTCTCGTTGCCGATGGATTCTCTTCCGCTCTCAGCAGGCGTGGTTATGCGGCGGCTTCGCAAGGAGTTGCGTCTAGTGCGGTTAAAGCAGGAAGCGTCGCAGCGGCGAGGAACAGTCATCTGTTGAAGAAATCGGGAGAGGAGAAGGTTGTTGGATCATCTGAGAAGGTTTCTTGGGTGCCGGATCCTGTTACGGGATATTACCGACCGGAGAATCGCGCCGATGAGATCGATGTTGCCGAACTTCGATCGATTCTTCTTAAGAACAAGAACTGAACGTATTTTCTCAAAAATGAATTGAAAAAAAAGTTAAATAAAAAAATCTAAAGCGAAAAGAGGCCTTCGGGCTTCGGATCGAAATTGAAAGAGGATTGGATCGGGCGAGAGCGTTGAATTTGTGAAGCAGTTTGGGGATTTGGAAACAAGCTCTAGGGCTTGATCGGCGATTTCCGTTTAGATGTTAAGTTTCTTCCTATTATACTCTGTATTTAGGATTTGATTGTTTTCTGTGAACTGTAATAGTAAAATACACAATGAATGATGAATCCAATAGGCATTTCTTGCCTTTGGTTTCTGTTCTTCGTTCTTCAAATTCCTCTTTTTTTTTTTTTTCTTTCTATTTTTCTTTTTCAGCGATAAAATTTAAGGCAAATGAAAAGTTGGAATCAAATCAAGCGTTTTGGAATTTGTGGTGATGAGATGAAACTGTTCAATATCGAAACATTTCGTATCGTAATGATGTTTATTGATTTTTTTTAAAAACTGAATTCACGCGCAACCTATTTTCGAGAAGAGTGGAAATT

Coding sequence (CDS)

ATGGCTCGCTCTTTCTCCAACGTTAAGGTCCTTTCCGCTCTCGTTGCCGATGGATTCTCTTCCGCTCTCAGCAGGCGTGGTTATGCGGCGGCTTCGCAAGGAGTTGCGTCTAGTGCGGTTAAAGCAGGAAGCGTCGCAGCGGCGAGGAACAGTCATCTGTTGAAGAAATCGGGAGAGGAGAAGGTTGTTGGATCATCTGAGAAGGTTTCTTGGGTGCCGGATCCTGTTACGGGATATTACCGACCGGAGAATCGCGCCGATGAGATCGATGTTGCCGAACTTCGATCGATTCTTCTTAAGAACAAGAACTGA

Protein sequence

MARSFSNVKVLSALVADGFSSALSRRGYAAASQGVASSAVKAGSVAAARNSHLLKKSGEEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNKN

Homology

[Close]

BLAST of Tan0005413.1 vs. ExPASy Swiss-Prot
Match: P32292 (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata OX=3916 GN=ARG2 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.2e-21
Identity = 62/102 (60.78%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAASQGVASSAVKAGSVAAARNSHLLKKSGEE 60
           MARSF+NVKVLSALVADGFS+  +R G+AAA+     SA + G   A+   +++ KSGEE
Sbjct: 1   MARSFTNVKVLSALVADGFSNTTTRHGFAAAA-AATQSATRGG---ASIGGNMVPKSGEE 60

Query: 61  KVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNK 103
           KV G  EKVSWVPDPVTGYYRPEN  +EIDVA++R+ +L  K
Sbjct: 61  KVRG-GEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVLGKK 96

[Close]

BLAST of Tan0005413.1 vs. ExPASy Swiss-Prot
Match: Q93WF6 (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SAG21 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-19
Identity = 58/103 (56.31%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAA-ASQGVASSAVKAGSVAAARNSHLLKKSGE 60
           MARS SNVK++SA V+   S+A+ RRGYAA A+QG  SS  ++G+VA+A    ++KK G 
Sbjct: 1   MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASA----VMKKKGV 60

Query: 61  EKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNK 103
           E+   S++K+SWVPDP TGYYRPE  ++EID AELR+ LL NK
Sbjct: 61  EE---STQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96

[Close]

BLAST of Tan0005413.1 vs. ExPASy Swiss-Prot
Match: Q9SRX6 (Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.8e-14
Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAASQGVASSAVKAGSVAAARNSHLLKKSGEE 60
           MARS +N K+ S   ++  S+A+ RRG+AAA++         GSV+ A    + K++GE 
Sbjct: 1   MARSLANAKIQSVFGSEKLSNAVFRRGFAAAAKTALD-----GSVSTA---EMKKRAGE- 60

Query: 61  KVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNK 103
               SSEK  WVPDP TGYYRPE  ++EID AELR+ILL NK
Sbjct: 61  ---ASSEKAPWVPDPKTGYYRPETVSEEIDPAELRAILLNNK 90

[Close]

BLAST of Tan0005413.1 vs. ExPASy Swiss-Prot
Match: Q39644 (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis OX=2711 GN=LEA5 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 6.8e-13
Identity = 47/104 (45.19%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAASQGVASSAVKAGSVAAARNSHLLKKSGEE 60
           MARS    K+L A VADG S ++SRRGYAAA+            +     + +++K+   
Sbjct: 1   MARSLFKAKLLLAPVADGISLSISRRGYAAAA-----------PLGTISRTGIMEKNDLR 60

Query: 61  KVV--GSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNK 103
             V   S    +W PDP+TGYYRPENRA EID AELR +LL +K
Sbjct: 61  PAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHK 93

[Close]

BLAST of Tan0005413.1 vs. ExPASy Swiss-Prot
Match: P46522 (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum OX=3635 GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.7e-12
Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAA-SQGVASSAVKAGSVAAARNSHLLKKSGE 60
           MARS S+ K+L A + DG   ++SRRGY+ A    V +S  + G++        +K+S  
Sbjct: 1   MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSS 60

Query: 61  EKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNK 103
            +    S   +W PDPVTGYYRPEN   EID AELR +LL ++
Sbjct: 61  SETRAYSS--AWAPDPVTGYYRPENCGAEIDAAELREMLLNHR 101

[Close]

BLAST of Tan0005413.1 vs. NCBI nr
Match: XP_023548996.1 (indole-3-acetic acid-induced protein ARG2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.8 bits (447), Expect = 9.7e-41
Identity = 98/105 (93.33%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAA--ASQGVASSAVKAGSVAAARNSHLLKKSG 60
           MARSFSNVKVLSALVADGFSSALSRRGYAA  ASQGVASSAVK GSVAAARNS+LLKKSG
Sbjct: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAARNSNLLKKSG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNKN 104
           EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRS+LL N+N
Sbjct: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNRN 105

[Close]

BLAST of Tan0005413.1 vs. NCBI nr
Match: XP_022991270.1 (indole-3-acetic acid-induced protein ARG2-like [Cucurbita maxima])

HSP 1 Score: 176.0 bits (445), Expect = 1.6e-40
Identity = 97/105 (92.38%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAA--ASQGVASSAVKAGSVAAARNSHLLKKSG 60
           MARSFSNVKVLSA+VADGFSSALSRRGYAA  ASQGVASSAVK GSVAAARNS+LLKKSG
Sbjct: 1   MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNKN 104
           EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRS+LL N+N
Sbjct: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNRN 105

[Close]

BLAST of Tan0005413.1 vs. NCBI nr
Match: XP_022960392.1 (indole-3-acetic acid-induced protein ARG2-like [Cucurbita moschata] >XP_023004707.1 indole-3-acetic acid-induced protein ARG2-like [Cucurbita maxima] >KAG6593206.1 Indole-3-acetic acid-induced protein ARG2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030213.1 Indole-3-acetic acid-induced protein ARG2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 174.1 bits (440), Expect = 6.3e-40
Identity = 93/103 (90.29%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAASQGVASSAVKAGSVAAARNSHLLKKSGEE 60
           MARSFSNVKVLSALV+DGFSSALSRRGYAAASQGVASSAVK GSVA AR+ ++LKKSGEE
Sbjct: 1   MARSFSNVKVLSALVSDGFSSALSRRGYAAASQGVASSAVKGGSVAVARSGNMLKKSGEE 60

Query: 61  KVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNKN 104
           KVVGSSEKV+WVPDP TGYYRPENR DEIDVAELRSILLKNKN
Sbjct: 61  KVVGSSEKVAWVPDPATGYYRPENRGDEIDVAELRSILLKNKN 103

[Close]

BLAST of Tan0005413.1 vs. NCBI nr
Match: KAG6575820.1 (Indole-3-acetic acid-induced protein ARG2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014358.1 Indole-3-acetic acid-induced protein ARG2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172.9 bits (437), Expect = 1.4e-39
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAA--ASQGVASSAVKAGSVAAARNSHLLKKSG 60
           MARSFSNVKVLSALVADGFSSALSRRGYAA  ASQGVASSAVK GSVAAA NS+LLKKSG
Sbjct: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAAMNSNLLKKSG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNKN 104
           EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRS LL N+N
Sbjct: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSALLNNRN 105

[Close]

BLAST of Tan0005413.1 vs. NCBI nr
Match: XP_023513499.1 (indole-3-acetic acid-induced protein ARG2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.9 bits (437), Expect = 1.4e-39
Identity = 92/103 (89.32%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAASQGVASSAVKAGSVAAARNSHLLKKSGEE 60
           MARSFSNVKVLSALV+DGFSSALSRRGYAAASQGVASSAVK GSV+ AR+ ++LKKSGEE
Sbjct: 1   MARSFSNVKVLSALVSDGFSSALSRRGYAAASQGVASSAVKGGSVSVARSGNMLKKSGEE 60

Query: 61  KVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNKN 104
           KVVGSSEKV+WVPDP TGYYRPENR DEIDVAELRSILLKNKN
Sbjct: 61  KVVGSSEKVAWVPDPATGYYRPENRGDEIDVAELRSILLKNKN 103

[Close]

BLAST of Tan0005413.1 vs. ExPASy TrEMBL
Match: A0A6J1JSE9 (indole-3-acetic acid-induced protein ARG2-like OS=Cucurbita maxima OX=3661 GN=LOC111487971 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 8.0e-41
Identity = 97/105 (92.38%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAA--ASQGVASSAVKAGSVAAARNSHLLKKSG 60
           MARSFSNVKVLSA+VADGFSSALSRRGYAA  ASQGVASSAVK GSVAAARNS+LLKKSG
Sbjct: 1   MARSFSNVKVLSAIVADGFSSALSRRGYAAAPASQGVASSAVKGGSVAAARNSNLLKKSG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNKN 104
           EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRS+LL N+N
Sbjct: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSVLLNNRN 105

[Close]

BLAST of Tan0005413.1 vs. ExPASy TrEMBL
Match: A0A6J1KR71 (indole-3-acetic acid-induced protein ARG2-like OS=Cucurbita maxima OX=3661 GN=LOC111497923 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.0e-40
Identity = 93/103 (90.29%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAASQGVASSAVKAGSVAAARNSHLLKKSGEE 60
           MARSFSNVKVLSALV+DGFSSALSRRGYAAASQGVASSAVK GSVA AR+ ++LKKSGEE
Sbjct: 1   MARSFSNVKVLSALVSDGFSSALSRRGYAAASQGVASSAVKGGSVAVARSGNMLKKSGEE 60

Query: 61  KVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNKN 104
           KVVGSSEKV+WVPDP TGYYRPENR DEIDVAELRSILLKNKN
Sbjct: 61  KVVGSSEKVAWVPDPATGYYRPENRGDEIDVAELRSILLKNKN 103

[Close]

BLAST of Tan0005413.1 vs. ExPASy TrEMBL
Match: A0A6J1H796 (indole-3-acetic acid-induced protein ARG2-like OS=Cucurbita moschata OX=3662 GN=LOC111461128 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.0e-40
Identity = 93/103 (90.29%), Postives = 98/103 (95.15%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAASQGVASSAVKAGSVAAARNSHLLKKSGEE 60
           MARSFSNVKVLSALV+DGFSSALSRRGYAAASQGVASSAVK GSVA AR+ ++LKKSGEE
Sbjct: 1   MARSFSNVKVLSALVSDGFSSALSRRGYAAASQGVASSAVKGGSVAVARSGNMLKKSGEE 60

Query: 61  KVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNKN 104
           KVVGSSEKV+WVPDP TGYYRPENR DEIDVAELRSILLKNKN
Sbjct: 61  KVVGSSEKVAWVPDPATGYYRPENRGDEIDVAELRSILLKNKN 103

[Close]

BLAST of Tan0005413.1 vs. ExPASy TrEMBL
Match: A0A6J1GQH1 (protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111456175 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.2e-39
Identity = 96/105 (91.43%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAA--ASQGVASSAVKAGSVAAARNSHLLKKSG 60
           MARSFSNVKV+SALVADGFSSALSRRGYAA  ASQGVASSAVK GSVAAA NS+LLKKSG
Sbjct: 1   MARSFSNVKVISALVADGFSSALSRRGYAAATASQGVASSAVKGGSVAAAMNSNLLKKSG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNKN 104
           EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRS LL N+N
Sbjct: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSALLNNRN 105

[Close]

BLAST of Tan0005413.1 vs. ExPASy TrEMBL
Match: A0A5D3D3A4 (Indole-3-acetic acid-induced protein ARG2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00680 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.1e-37
Identity = 90/105 (85.71%), Postives = 97/105 (92.38%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAA--SQGVASSAVKAGSVAAARNSHLLKKSG 60
           MARSFSNVK+LSA+V+DGFSS L+ RGYAAA  SQGVASSAVK   VAAAR+S+LLKKSG
Sbjct: 1   MARSFSNVKILSAVVSDGFSSLLTSRGYAAAAGSQGVASSAVKGAGVAAARSSNLLKKSG 60

Query: 61  EEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNKN 104
           EEKVVGS+EKVSWVPDPVTGYYRPENR DEIDVAELRSILLKNKN
Sbjct: 61  EEKVVGSTEKVSWVPDPVTGYYRPENRCDEIDVAELRSILLKNKN 105

[Close]

BLAST of Tan0005413.1 vs. TAIR 10
Match: AT4G02380.1 (senescence-associated gene 21 )

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-20
Identity = 58/103 (56.31%), Postives = 77/103 (74.76%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAA-ASQGVASSAVKAGSVAAARNSHLLKKSGE 60
           MARS SNVK++SA V+   S+A+ RRGYAA A+QG  SS  ++G+VA+A    ++KK G 
Sbjct: 1   MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASA----VMKKKGV 60

Query: 61  EKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNK 103
           E+   S++K+SWVPDP TGYYRPE  ++EID AELR+ LL NK
Sbjct: 61  EE---STQKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96

[Close]

BLAST of Tan0005413.1 vs. TAIR 10
Match: AT1G02820.1 (Late embryogenesis abundant 3 (LEA3) family protein )

HSP 1 Score: 79.3 bits (194), Expect = 2.0e-15
Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 0


Query: 1   MARSFSNVKVLSALVADGFSSALSRRGYAAASQGVASSAVKAGSVAAARNSHLLKKSGEE 60
           MARS +N K+ S   ++  S+A+ RRG+AAA++         GSV+ A    + K++GE 
Sbjct: 1   MARSLANAKIQSVFGSEKLSNAVFRRGFAAAAKTALD-----GSVSTA---EMKKRAGE- 60

Query: 61  KVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNK 103
               SSEK  WVPDP TGYYRPE  ++EID AELR+ILL NK
Sbjct: 61  ---ASSEKAPWVPDPKTGYYRPETVSEEIDPAELRAILLNNK 90

[Close]

BLAST of Tan0005413.1 vs. TAIR 10
Match: AT4G02380.2 (senescence-associated gene 21 )

HSP 1 Score: 75.5 bits (184), Expect = 2.8e-14
Identity = 44/79 (55.70%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 25  RRGYAA-ASQGVASSAVKAGSVAAARNSHLLKKSGEEKVVGSSEKVSWVPDPVTGYYRPE 84
           +RGYAA A+QG  SS  ++G+VA+A    ++KK G E+   S++K+SWVPDP TGYYRPE
Sbjct: 6   KRGYAATAAQGSVSSGGRSGAVASA----VMKKKGVEE---STQKISWVPDPKTGYYRPE 65

Query: 85  NRADEIDVAELRSILLKNK 103
             ++EID AELR+ LL NK
Sbjct: 66  TGSNEIDAAELRAALLNNK 77

[Close]

BLAST of Tan0005413.1 vs. TAIR 10
Match: AT4G15910.1 (drought-induced 21 )

HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11
Identity = 44/103 (42.72%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 2   ARSFSN-VKVLSALVADGFS-SALSRRGYAAASQGVASSAVKAGSVAAARNSHLLKKSGE 61
           ARS S  VK L +  +   S S + RR Y A SQ V ++ +  G      ++ ++    E
Sbjct: 3   ARSLSGAVKSLCSAASGSLSCSIVLRRSYVATSQNVTAAGLSKGG-----STRVMVGKME 62

Query: 62  EKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNK 103
           ++ +    + +W PDPVTGYYRP NRA EID AELR +LLKNK
Sbjct: 63  QRGLDQEAESAWGPDPVTGYYRPSNRAAEIDPAELRELLLKNK 100

[Close]

BLAST of Tan0005413.1 vs. TAIR 10
Match: AT3G53770.1 (late embryogenesis abundant 3 (LEA3) family protein )

HSP 1 Score: 47.8 bits (112), Expect = 6.3e-06
Identity = 25/60 (41.67%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 44  SVAAARNSHLLKKSGEEKVVGSSEKVSWVPDPVTGYYRPENRADEIDVAELRSILLKNKN 103
           + A   + ++ K S  +  +   E++ W+PDP TGYYRP+N A E+D  ELRS+   NKN
Sbjct: 59  TAAKELDPYIAKTSQVQGKMMRGEELWWMPDPQTGYYRPDNFARELDAVELRSLHF-NKN 117

The following BLAST results are available for this feature:

BLAST of Tan0005413.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32292	5.2e-21	60.78	Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata OX=3916 ...	[more]
Q93WF6	1.7e-19	56.31	Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
Q9SRX6	2.8e-14	49.02	Late embryogenis abundant protein 2 OS=Arabidopsis thaliana OX=3702 GN=LEA2 PE=2...	[more]
Q39644	6.8e-13	45.19	Late embryogenesis abundant protein Lea5 OS=Citrus sinensis OX=2711 GN=LEA5 PE=2...	[more]
P46522	5.7e-12	42.72	Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum OX=3635 GN=LEA5...	[more]

BLAST of Tan0005413.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548996.1	9.7e-41	93.33	indole-3-acetic acid-induced protein ARG2 [Cucurbita pepo subsp. pepo]	[more]
XP_022991270.1	1.6e-40	92.38	indole-3-acetic acid-induced protein ARG2-like [Cucurbita maxima]	[more]
XP_022960392.1	6.3e-40	90.29	indole-3-acetic acid-induced protein ARG2-like [Cucurbita moschata] >XP_02300470...	[more]
KAG6575820.1	1.4e-39	92.38	Indole-3-acetic acid-induced protein ARG2, partial [Cucurbita argyrosperma subsp...	[more]
XP_023513499.1	1.4e-39	89.32	indole-3-acetic acid-induced protein ARG2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0005413.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JSE9	8.0e-41	92.38	indole-3-acetic acid-induced protein ARG2-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1KR71	3.0e-40	90.29	indole-3-acetic acid-induced protein ARG2-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1H796	3.0e-40	90.29	indole-3-acetic acid-induced protein ARG2-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1GQH1	1.2e-39	91.43	protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Cucurbita moschata OX=36...	[more]
A0A5D3D3A4	4.1e-37	85.71	Indole-3-acetic acid-induced protein ARG2-like OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Tan0005413.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02380.1	1.2e-20	56.31	senescence-associated gene 21	[more]
AT1G02820.1	2.0e-15	49.02	Late embryogenesis abundant 3 (LEA3) family protein	[more]
AT4G02380.2	2.8e-14	55.70	senescence-associated gene 21	[more]
AT4G15910.1	2.2e-11	42.72	drought-induced 21	[more]
AT3G53770.1	6.3e-06	41.67	late embryogenesis abundant 3 (LEA3) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004926	Late embryogenesis abundant protein, LEA_3 subgroup	PFAM	PF03242	LEA_3	coord: 1..99 e-value: 2.6E-32 score: 111.4
IPR004926	Late embryogenesis abundant protein, LEA_3 subgroup	PANTHER	PTHR33509	LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED	coord: 1..102
None	No IPR available	PANTHER	PTHR33509:SF5	LATE EMBRYOGENIS ABUNDANT PROTEIN 2	coord: 1..102

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0005413	Tan0005413	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0005413.1-three_prime_utr	Tan0005413.1-three_prime_utr-LG06:6616933..6617459	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0005413.1-exon	Tan0005413.1-exon-LG06:6616933..6617697	exon
Tan0005413.1-exon	Tan0005413.1-exon-LG06:6617815..6618094	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0005413.1-cds	Tan0005413.1-cds-LG06:6617460..6617697	CDS
Tan0005413.1-cds	Tan0005413.1-cds-LG06:6617815..6617888	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0005413.1-five_prime_utr	Tan0005413.1-five_prime_utr-LG06:6617889..6618094	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0005413.1	Tan0005413.1-protein	polypeptide