Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGACCGTCGCCTTCACCATTTCTCAAAAACCATGAGAATTTATTTATCACCTTCTTCTCTTTTACCAGTCTTCTTTCTGATCGTCCTCGCCGCCGGTATTATCAGGGACGCCGGATTCAATCTCTTCGCCGAAGGTGGACAACGGAGAATCCACATTACAGATGATCTCGACGACGTGGTTGACGATGAGGAGGACGAATCTTGGAAGGAATGGGGCAAGAAAAAGTCTGCCTCTAGCAATTTCGACCTCCCGCCGGCCGATTTATCGAAGATGGAGCTTCCGGAGATTCAGGCTGAGATGATGAAGCGGCAGTCTGGTCCAACTATGGGATTTGTGAAGCTTCGGCTCGGTGTTCGGCGGACTCCGGTAAGAAATGTCGCTAATCTCCCTTACTGAGATGTTTATTTCATTCCGGAAAGTGATGAACAATCTAATTGCTGCTGGTCAAATCGGTTTCGGTTTCTTTACTGTAATGGTTTCTGATTTCGAATGCAAGTCGAATCTAGATTTTACGACATGGAATTTGTGTAAACGGATGCTAAAGTTGAAACGAAAAACCTTGAAAATCTCGAGTAACCTGTGTGTTTTCTGTTAATTGTATGTGTATAGGGTTTCTGATTGAAAAATTCGTCGACTAACACGTCTTTAAATGACCACGTTTTACCAGCATTTATTGCTCTTGATTGATTTCAGGACATGGTGGCTGAGATTGCTATGCAATGGACGAGAGTTCTGAAAACTGGATCAGTCGAGGCAAAATTTATGGCGGTTGACCTTAATACACTCATGTTTACTATGGACAGAGGACAAGACTTGGATGAGGTACGCTTCAATTTCCAGAATCTGGAATGAAACTCCTCAATTGTTCTTCAATTTGCCAGAGAAATAGTTTTTACACCCAATTTTGATCTCTGGGATCCAATTCAAAATCCTATACCTAATTCCGATCCCGTAGTTCAAGTTGAACAGTCTTGGACCATTTTAATACTGTCACTGAAATTCGAACTTAAATTTTGTGAACTTCTGATACATTTTCTGTATTATCAAACTATCACAGTTAAGTAGATTCTGTATTATCAAACTGTCCATTTACTGGGTCTTTTTTAAAAATATTTTGTTGATATGATATCATATTTCATAAATAAGTAGAGTCTAGAAATTTATTTTTATCCCATAAGAAAAAAATCACATTAGAATATAAGTATAGCTTAATTTTGCCTCTATACCACAGCAAGCATTTATGTTCAACTATTTTTGGTGGGTTTTAGTAGGTTTATAATCCATTTTAATAAATAAGTTTAAAAATCGACCATATAAGGAAGCCAGAAAGAGCTCGATGGTGAAATTATGTTGTAATCAAAATTAAGTTGTTTGTAGAGGACTTACTTTATCTTTATTCATAAAACTTGTTGGATAGAACAATCTTTTTAACAAGTAAATTCTTTTTGGAAGTGTGGAAACGCCTCTTGTTTTTGTTCTTACATGTTCTTTCTCCCAAAATTATTCTTCATATGCAAAACTATAGTGTTTTTCGATGTTTATGACTCAAATTTATGGTACAACAAGCTAACAAAAATGAAAATGTTATACCAAGAACATCATTCCTCACACCTAGTTTTGATCAAATGGGCTGTTCCTCTGTTTTCACTTTCAGAAAGTAACCCATCAAACAAAACTCTCTGAGCAGAAAAAACAGTTCATTCTTTGAAAAAATAGGAGGAAGTTCCTTAACATAGCTTCAATCGCAGGAGAATAGCTTTTGAAATTCAGTACTTTTTTTTCAACTTTTTTGTTGTTAATGTTCTTTTGTTATACATTGTGAGAGCAGTTGAAGGAGTTTGTGTTGAGCCAACCAGAGTCATACGAGGTCAAAATTGGGGAGCAAGTATTTCGAAGACCTGGAGATCCTCCTGTTCAGGAAGTCATTGAGATGCTCCAAAAAGATAAGAACAAAGTTGATGACACCAATCCTTCAGAAAATGCCGAGCCATTGCATCAAGAATTGTAGAACTAATATGGTATCAATCTTCAACTTTGAAACTGGGATTTTTGGATTTGTTAATTTGTTTAGCTTTTGAATATTGTTGTAGCCGATGGAAATCATCTCTTGCCCCTTGGACTCTAGGAATTTGCTCTTTTTGGGTGGGGTACTTTGAATTTTTTTTAGCTAAGATATCATTCTCGTTGGTTTATTTTGAAAAGAGATATTGATTTCCACTTGTTTGGTATCTCTACAAATTTTAAAGCCCA
mRNA sequence
CGACCGTCGCCTTCACCATTTCTCAAAAACCATGAGAATTTATTTATCACCTTCTTCTCTTTTACCAGTCTTCTTTCTGATCGTCCTCGCCGCCGGTATTATCAGGGACGCCGGATTCAATCTCTTCGCCGAAGGTGGACAACGGAGAATCCACATTACAGATGATCTCGACGACGTGGTTGACGATGAGGAGGACGAATCTTGGAAGGAATGGGGCAAGAAAAAGTCTGCCTCTAGCAATTTCGACCTCCCGCCGGCCGATTTATCGAAGATGGAGCTTCCGGAGATTCAGGCTGAGATGATGAAGCGGCAGTCTGGTCCAACTATGGGATTTGTGAAGCTTCGGCTCGGTGTTCGGCGGACTCCGGACATGGTGGCTGAGATTGCTATGCAATGGACGAGAGTTCTGAAAACTGGATCAGTCGAGGCAAAATTTATGGCGGTTGACCTTAATACACTCATGTTTACTATGGACAGAGGACAAGACTTGGATGAGTTGAAGGAGTTTGTGTTGAGCCAACCAGAGTCATACGAGGTCAAAATTGGGGAGCAAGTATTTCGAAGACCTGGAGATCCTCCTGTTCAGGAAGTCATTGAGATGCTCCAAAAAGATAAGAACAAAGTTGATGACACCAATCCTTCAGAAAATGCCGAGCCATTGCATCAAGAATTGTAGAACTAATATGGTATCAATCTTCAACTTTGAAACTGGGATTTTTGGATTTGTTAATTTGTTTAGCTTTTGAATATTGTTGTAGCCGATGGAAATCATCTCTTGCCCCTTGGACTCTAGGAATTTGCTCTTTTTGGGTGGGGTACTTTGAATTTTTTTTAGCTAAGATATCATTCTCGTTGGTTTATTTTGAAAAGAGATATTGATTTCCACTTGTTTGGTATCTCTACAAATTTTAAAGCCCA
Coding sequence (CDS)
ATGAGAATTTATTTATCACCTTCTTCTCTTTTACCAGTCTTCTTTCTGATCGTCCTCGCCGCCGGTATTATCAGGGACGCCGGATTCAATCTCTTCGCCGAAGGTGGACAACGGAGAATCCACATTACAGATGATCTCGACGACGTGGTTGACGATGAGGAGGACGAATCTTGGAAGGAATGGGGCAAGAAAAAGTCTGCCTCTAGCAATTTCGACCTCCCGCCGGCCGATTTATCGAAGATGGAGCTTCCGGAGATTCAGGCTGAGATGATGAAGCGGCAGTCTGGTCCAACTATGGGATTTGTGAAGCTTCGGCTCGGTGTTCGGCGGACTCCGGACATGGTGGCTGAGATTGCTATGCAATGGACGAGAGTTCTGAAAACTGGATCAGTCGAGGCAAAATTTATGGCGGTTGACCTTAATACACTCATGTTTACTATGGACAGAGGACAAGACTTGGATGAGTTGAAGGAGTTTGTGTTGAGCCAACCAGAGTCATACGAGGTCAAAATTGGGGAGCAAGTATTTCGAAGACCTGGAGATCCTCCTGTTCAGGAAGTCATTGAGATGCTCCAAAAAGATAAGAACAAAGTTGATGACACCAATCCTTCAGAAAATGCCGAGCCATTGCATCAAGAATTGTAG
Protein sequence
MRIYLSPSSLLPVFFLIVLAAGIIRDAGFNLFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSNFDLPPADLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPDMVAEIAMQWTRVLKTGSVEAKFMAVDLNTLMFTMDRGQDLDELKEFVLSQPESYEVKIGEQVFRRPGDPPVQEVIEMLQKDKNKVDDTNPSENAEPLHQEL
Homology
BLAST of Tan0005343.2 vs. NCBI nr
Match:
XP_023540100.1 (uncharacterized protein LOC111800579 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 382.9 bits (982), Expect = 1.8e-102
Identity = 191/214 (89.25%), Postives = 201/214 (93.93%), Query Frame = 0
Query: 1 MRIYLSPSSLLPVFFLIVLAAGIIRDAGFNLFAEGGQRRIHITDDLDDVVDDEEDESWKE 60
MRI SPSSLLPVFFLIVL AGI +D GFN FAEGGQRRIHITDDLDDVVDDEEDESWKE
Sbjct: 1 MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKE 60
Query: 61 WGKKKSASSNFDLPPADLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPDMVAEIAM 120
WGKKKSASS+FDLPP DLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTP+MVA IAM
Sbjct: 61 WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVATIAM 120
Query: 121 QWTRVLKTGSVEAKFMAVDLNTLMFTMDRGQDLDELKEFVLSQPESYEVKIGEQVFRRPG 180
QWTR+LKTGS+EAKFMAVDL+TLMFT+DRGQDLDELKEFV S PESYE+KIGEQ FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180
Query: 181 DPPVQEVIEMLQKDKNKVDDTNPSENAEPLHQEL 215
DPPV+EVIEMLQKDKNK DDTNPSE+ EPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214
BLAST of Tan0005343.2 vs. NCBI nr
Match:
XP_022942170.1 (uncharacterized protein LOC111447309 [Cucurbita moschata])
HSP 1 Score: 382.9 bits (982), Expect = 1.8e-102
Identity = 191/214 (89.25%), Postives = 201/214 (93.93%), Query Frame = 0
Query: 1 MRIYLSPSSLLPVFFLIVLAAGIIRDAGFNLFAEGGQRRIHITDDLDDVVDDEEDESWKE 60
MRI SPSSLLPVFFLIVL AGI +DAGFN FAEGGQRRIHITDDLDDVVDDEEDESWKE
Sbjct: 1 MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKE 60
Query: 61 WGKKKSASSNFDLPPADLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPDMVAEIAM 120
WGKKKSASS+FDLPP DLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTP+MV IAM
Sbjct: 61 WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120
Query: 121 QWTRVLKTGSVEAKFMAVDLNTLMFTMDRGQDLDELKEFVLSQPESYEVKIGEQVFRRPG 180
QWTR+LKTGS+EAKFMAVDL+TLMFT+DRGQDLDELKEFV S PESYE+KIGEQ FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180
Query: 181 DPPVQEVIEMLQKDKNKVDDTNPSENAEPLHQEL 215
DPPV+EVIEMLQKDKNK DDTNPSE+ EPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214
BLAST of Tan0005343.2 vs. NCBI nr
Match:
KAG6597131.1 (hypothetical protein SDJN03_10311, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028598.1 hypothetical protein SDJN02_09779, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 381.3 bits (978), Expect = 5.4e-102
Identity = 190/214 (88.79%), Postives = 200/214 (93.46%), Query Frame = 0
Query: 1 MRIYLSPSSLLPVFFLIVLAAGIIRDAGFNLFAEGGQRRIHITDDLDDVVDDEEDESWKE 60
MRI SPSSLLPVFFLIVL AGI +D GFN FAEGGQRRIHITDDLDDVVDDEEDESWKE
Sbjct: 1 MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKE 60
Query: 61 WGKKKSASSNFDLPPADLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPDMVAEIAM 120
WGKKKSASS+FDLPP DLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTP+MV IAM
Sbjct: 61 WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120
Query: 121 QWTRVLKTGSVEAKFMAVDLNTLMFTMDRGQDLDELKEFVLSQPESYEVKIGEQVFRRPG 180
QWTR+LKTGS+EAKFMAVDL+TLMFT+DRGQDLDELKEFV S PESYE+KIGEQ FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180
Query: 181 DPPVQEVIEMLQKDKNKVDDTNPSENAEPLHQEL 215
DPPV+EVIEMLQKDKNK DDTNPSE+ EPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214
BLAST of Tan0005343.2 vs. NCBI nr
Match:
XP_022974607.1 (uncharacterized protein LOC111473291 [Cucurbita maxima])
HSP 1 Score: 378.6 bits (971), Expect = 3.5e-101
Identity = 189/214 (88.32%), Postives = 200/214 (93.46%), Query Frame = 0
Query: 1 MRIYLSPSSLLPVFFLIVLAAGIIRDAGFNLFAEGGQRRIHITDDLDDVVDDEEDESWKE 60
MRI SPSSLLPVFFLIVL AGI +D GFN FAEGGQRRI ITDDLDDVVDDEEDESWKE
Sbjct: 1 MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIQITDDLDDVVDDEEDESWKE 60
Query: 61 WGKKKSASSNFDLPPADLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPDMVAEIAM 120
WGKKKSASS+FDLPP DLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTP+MVA IAM
Sbjct: 61 WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVATIAM 120
Query: 121 QWTRVLKTGSVEAKFMAVDLNTLMFTMDRGQDLDELKEFVLSQPESYEVKIGEQVFRRPG 180
QWTR+LKTGS+EAKFMAVDL+TLMFT+DRGQDLDELKEFV + PESYE+KIGEQ FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFNHPESYEIKIGEQAFRRPG 180
Query: 181 DPPVQEVIEMLQKDKNKVDDTNPSENAEPLHQEL 215
DPPV+EVIEMLQKDKNK DDTNPSE+ EPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214
BLAST of Tan0005343.2 vs. NCBI nr
Match:
XP_008438032.1 (PREDICTED: uncharacterized protein LOC103483266 [Cucumis melo] >KAA0048962.1 Mesd domain-containing protein [Cucumis melo var. makuwa] >TYK17605.1 Mesd domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 362.5 bits (929), Expect = 2.6e-96
Identity = 180/214 (84.11%), Postives = 199/214 (92.99%), Query Frame = 0
Query: 1 MRIYLSPSSLLPVFFLIVLAAGIIRDAGFNLFAEGGQRRIHITDDLDDVVDDEEDESWKE 60
MRI S SS LPVF LIV+A GI++DAGFN FA+GGQRRIHITDDLDDVVDDEED+SWK+
Sbjct: 1 MRICFSRSSPLPVFILIVIATGILKDAGFNRFADGGQRRIHITDDLDDVVDDEEDDSWKD 60
Query: 61 WGKKKSASSNFDLPPADLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPDMVAEIAM 120
WGKKKS SS+FD+PPADLSKM+ PEIQAEMMKR SGPTMGFVKLRLGVRRTPDMVAEIAM
Sbjct: 61 WGKKKSVSSDFDIPPADLSKMDFPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDMVAEIAM 120
Query: 121 QWTRVLKTGSVEAKFMAVDLNTLMFTMDRGQDLDELKEFVLSQPESYEVKIGEQVFRRPG 180
QWT+VLKTGSV+AKFMAVDLNTLMFTMDRGQDL+ELKEFVLSQ ESYE+KIG+ VFRRPG
Sbjct: 121 QWTKVLKTGSVDAKFMAVDLNTLMFTMDRGQDLNELKEFVLSQAESYEIKIGDNVFRRPG 180
Query: 181 DPPVQEVIEMLQKDKNKVDDTNPSENAEPLHQEL 215
DPP++EVI++LQKDKNK D T PSENAEPLH+EL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVPSENAEPLHREL 214
BLAST of Tan0005343.2 vs. ExPASy TrEMBL
Match:
A0A6J1FVR6 (uncharacterized protein LOC111447309 OS=Cucurbita moschata OX=3662 GN=LOC111447309 PE=4 SV=1)
HSP 1 Score: 382.9 bits (982), Expect = 8.9e-103
Identity = 191/214 (89.25%), Postives = 201/214 (93.93%), Query Frame = 0
Query: 1 MRIYLSPSSLLPVFFLIVLAAGIIRDAGFNLFAEGGQRRIHITDDLDDVVDDEEDESWKE 60
MRI SPSSLLPVFFLIVL AGI +DAGFN FAEGGQRRIHITDDLDDVVDDEEDESWKE
Sbjct: 1 MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKE 60
Query: 61 WGKKKSASSNFDLPPADLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPDMVAEIAM 120
WGKKKSASS+FDLPP DLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTP+MV IAM
Sbjct: 61 WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120
Query: 121 QWTRVLKTGSVEAKFMAVDLNTLMFTMDRGQDLDELKEFVLSQPESYEVKIGEQVFRRPG 180
QWTR+LKTGS+EAKFMAVDL+TLMFT+DRGQDLDELKEFV S PESYE+KIGEQ FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180
Query: 181 DPPVQEVIEMLQKDKNKVDDTNPSENAEPLHQEL 215
DPPV+EVIEMLQKDKNK DDTNPSE+ EPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214
BLAST of Tan0005343.2 vs. ExPASy TrEMBL
Match:
A0A6J1IAQ9 (uncharacterized protein LOC111473291 OS=Cucurbita maxima OX=3661 GN=LOC111473291 PE=4 SV=1)
HSP 1 Score: 378.6 bits (971), Expect = 1.7e-101
Identity = 189/214 (88.32%), Postives = 200/214 (93.46%), Query Frame = 0
Query: 1 MRIYLSPSSLLPVFFLIVLAAGIIRDAGFNLFAEGGQRRIHITDDLDDVVDDEEDESWKE 60
MRI SPSSLLPVFFLIVL AGI +D GFN FAEGGQRRI ITDDLDDVVDDEEDESWKE
Sbjct: 1 MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIQITDDLDDVVDDEEDESWKE 60
Query: 61 WGKKKSASSNFDLPPADLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPDMVAEIAM 120
WGKKKSASS+FDLPP DLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTP+MVA IAM
Sbjct: 61 WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVATIAM 120
Query: 121 QWTRVLKTGSVEAKFMAVDLNTLMFTMDRGQDLDELKEFVLSQPESYEVKIGEQVFRRPG 180
QWTR+LKTGS+EAKFMAVDL+TLMFT+DRGQDLDELKEFV + PESYE+KIGEQ FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFNHPESYEIKIGEQAFRRPG 180
Query: 181 DPPVQEVIEMLQKDKNKVDDTNPSENAEPLHQEL 215
DPPV+EVIEMLQKDKNK DDTNPSE+ EPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214
BLAST of Tan0005343.2 vs. ExPASy TrEMBL
Match:
A0A5A7TZI6 (Mesd domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004750 PE=3 SV=1)
HSP 1 Score: 362.5 bits (929), Expect = 1.2e-96
Identity = 180/214 (84.11%), Postives = 199/214 (92.99%), Query Frame = 0
Query: 1 MRIYLSPSSLLPVFFLIVLAAGIIRDAGFNLFAEGGQRRIHITDDLDDVVDDEEDESWKE 60
MRI S SS LPVF LIV+A GI++DAGFN FA+GGQRRIHITDDLDDVVDDEED+SWK+
Sbjct: 1 MRICFSRSSPLPVFILIVIATGILKDAGFNRFADGGQRRIHITDDLDDVVDDEEDDSWKD 60
Query: 61 WGKKKSASSNFDLPPADLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPDMVAEIAM 120
WGKKKS SS+FD+PPADLSKM+ PEIQAEMMKR SGPTMGFVKLRLGVRRTPDMVAEIAM
Sbjct: 61 WGKKKSVSSDFDIPPADLSKMDFPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDMVAEIAM 120
Query: 121 QWTRVLKTGSVEAKFMAVDLNTLMFTMDRGQDLDELKEFVLSQPESYEVKIGEQVFRRPG 180
QWT+VLKTGSV+AKFMAVDLNTLMFTMDRGQDL+ELKEFVLSQ ESYE+KIG+ VFRRPG
Sbjct: 121 QWTKVLKTGSVDAKFMAVDLNTLMFTMDRGQDLNELKEFVLSQAESYEIKIGDNVFRRPG 180
Query: 181 DPPVQEVIEMLQKDKNKVDDTNPSENAEPLHQEL 215
DPP++EVI++LQKDKNK D T PSENAEPLH+EL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVPSENAEPLHREL 214
BLAST of Tan0005343.2 vs. ExPASy TrEMBL
Match:
A0A1S3AVD9 (uncharacterized protein LOC103483266 OS=Cucumis melo OX=3656 GN=LOC103483266 PE=3 SV=1)
HSP 1 Score: 362.5 bits (929), Expect = 1.2e-96
Identity = 180/214 (84.11%), Postives = 199/214 (92.99%), Query Frame = 0
Query: 1 MRIYLSPSSLLPVFFLIVLAAGIIRDAGFNLFAEGGQRRIHITDDLDDVVDDEEDESWKE 60
MRI S SS LPVF LIV+A GI++DAGFN FA+GGQRRIHITDDLDDVVDDEED+SWK+
Sbjct: 1 MRICFSRSSPLPVFILIVIATGILKDAGFNRFADGGQRRIHITDDLDDVVDDEEDDSWKD 60
Query: 61 WGKKKSASSNFDLPPADLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPDMVAEIAM 120
WGKKKS SS+FD+PPADLSKM+ PEIQAEMMKR SGPTMGFVKLRLGVRRTPDMVAEIAM
Sbjct: 61 WGKKKSVSSDFDIPPADLSKMDFPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDMVAEIAM 120
Query: 121 QWTRVLKTGSVEAKFMAVDLNTLMFTMDRGQDLDELKEFVLSQPESYEVKIGEQVFRRPG 180
QWT+VLKTGSV+AKFMAVDLNTLMFTMDRGQDL+ELKEFVLSQ ESYE+KIG+ VFRRPG
Sbjct: 121 QWTKVLKTGSVDAKFMAVDLNTLMFTMDRGQDLNELKEFVLSQAESYEIKIGDNVFRRPG 180
Query: 181 DPPVQEVIEMLQKDKNKVDDTNPSENAEPLHQEL 215
DPP++EVI++LQKDKNK D T PSENAEPLH+EL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVPSENAEPLHREL 214
BLAST of Tan0005343.2 vs. ExPASy TrEMBL
Match:
A0A0A0L7G1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122310 PE=3 SV=1)
HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94
Identity = 176/214 (82.24%), Postives = 197/214 (92.06%), Query Frame = 0
Query: 1 MRIYLSPSSLLPVFFLIVLAAGIIRDAGFNLFAEGGQRRIHITDDLDDVVDDEEDESWKE 60
MRI S SS LPVF LIV+AAGI+ D GFN FA+GGQRR+HITDDLDDVVDDEED+SWK+
Sbjct: 1 MRICFSRSSRLPVFILIVIAAGILNDVGFNRFADGGQRRVHITDDLDDVVDDEEDDSWKD 60
Query: 61 WGKKKSASSNFDLPPADLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPDMVAEIAM 120
WGKKKSAS++FD+PPADLSKM++PEIQAEMMKR SGPTMGFVKLRLGVRRTPD VAEIAM
Sbjct: 61 WGKKKSASNDFDIPPADLSKMDIPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDTVAEIAM 120
Query: 121 QWTRVLKTGSVEAKFMAVDLNTLMFTMDRGQDLDELKEFVLSQPESYEVKIGEQVFRRPG 180
QWT+VLKTGSVEAKFMAVDLNTLMFTMDRGQDL+EL EFVLSQ ESYE+KIG+ VFRRPG
Sbjct: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLNELNEFVLSQAESYEIKIGDNVFRRPG 180
Query: 181 DPPVQEVIEMLQKDKNKVDDTNPSENAEPLHQEL 215
DPP++EVI++LQKDKNK D T S+N+EPLHQEL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVSSKNSEPLHQEL 214
BLAST of Tan0005343.2 vs. TAIR 10
Match:
AT2G46000.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 193.4 bits (490), Expect = 1.9e-49
Identity = 99/170 (58.24%), Postives = 126/170 (74.12%), Query Frame = 0
Query: 28 GFNLFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSNFDLPPADLSKMELPEIQ 87
GF AE +RRI I+DDLDDV D+EEDESWKEWG KK+ + FD PP D + M +IQ
Sbjct: 24 GFVRIAEATKRRIEISDDLDDVEDNEEDESWKEWG-KKATTPEFD-PPPDFTNMGFDQIQ 83
Query: 88 AEMMKRQSGPTMGFVKLRLGVRRTPDMVAEIAMQWTRVLKTGSVEAKFMAVDLNTLMFTM 147
EM KR G +GFVKLRLGV RT D+V +IAM+WT+VL+TG + +FMAVD +T+MF M
Sbjct: 84 EEMAKRTFGTVVGFVKLRLGVPRTKDVVIDIAMKWTKVLRTGGIGVRFMAVDRSTVMFNM 143
Query: 148 DRGQDLDELKEFVLSQPESYEVKIGEQVFRRPGDPPVQEVIEMLQKDKNK 198
G+ + EL+EFVLSQ E+YEVKIG+Q FRRPGDPP ++V + Q ++ K
Sbjct: 144 QNGKLVTELREFVLSQEEAYEVKIGKQEFRRPGDPPFEDVFDKFQAEQRK 191
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023540100.1 | 1.8e-102 | 89.25 | uncharacterized protein LOC111800579 [Cucurbita pepo subsp. pepo] | [more] |
XP_022942170.1 | 1.8e-102 | 89.25 | uncharacterized protein LOC111447309 [Cucurbita moschata] | [more] |
KAG6597131.1 | 5.4e-102 | 88.79 | hypothetical protein SDJN03_10311, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022974607.1 | 3.5e-101 | 88.32 | uncharacterized protein LOC111473291 [Cucurbita maxima] | [more] |
XP_008438032.1 | 2.6e-96 | 84.11 | PREDICTED: uncharacterized protein LOC103483266 [Cucumis melo] >KAA0048962.1 Mes... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FVR6 | 8.9e-103 | 89.25 | uncharacterized protein LOC111447309 OS=Cucurbita moschata OX=3662 GN=LOC1114473... | [more] |
A0A6J1IAQ9 | 1.7e-101 | 88.32 | uncharacterized protein LOC111473291 OS=Cucurbita maxima OX=3661 GN=LOC111473291... | [more] |
A0A5A7TZI6 | 1.2e-96 | 84.11 | Mesd domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A1S3AVD9 | 1.2e-96 | 84.11 | uncharacterized protein LOC103483266 OS=Cucumis melo OX=3656 GN=LOC103483266 PE=... | [more] |
A0A0A0L7G1 | 1.5e-94 | 82.24 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122310 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT2G46000.1 | 1.9e-49 | 58.24 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Type |
Tan0005343 | Tan0005343 | gene |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Tan0005343.2-five_prime_utr | Tan0005343.2-five_prime_utr-LG10:1922219..1922249 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Tan0005343.2-exon | Tan0005343.2-exon-LG10:1922219..1922585 | exon |
Tan0005343.2-exon | Tan0005343.2-exon-LG10:1922913..1923041 | exon |
Tan0005343.2-exon | Tan0005343.2-exon-LG10:1924048..1924469 | exon |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Tan0005343.2-cds | Tan0005343.2-cds-LG10:1922250..1922585 | CDS |
Tan0005343.2-cds | Tan0005343.2-cds-LG10:1922913..1923041 | CDS |
Tan0005343.2-cds | Tan0005343.2-cds-LG10:1924048..1924227 | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
Tan0005343.2-three_prime_utr | Tan0005343.2-three_prime_utr-LG10:1924228..1924469 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
Tan0005343.2 | Tan0005343.2-protein | polypeptide |