
Tan0003703.3 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCGAAATAAAAAAATTAAATCAAAATATGAAAAAGAAAATGATCGACTTTACGACCTCTTAACTAAAAATTACGAAAAAAGAAAAGTTAATAAATGAAAAAATAAAATAAAATTTATAAAAGAGAGAGAGAAATAGAAAAAATGGCAATTTCGTATATAAAGGAAGGAAGGGCAGCAAATGCTCCAACAAACTACTTCCCCATTGTTTTTTGCTCAGAGTTTTTACTCCACCACTTTACTGACAAAAACTTGTGGTCTCTGTTTCTTCAAGCTCCATTTTTAAGCCCTCTCGCCGCCGTCTCTTTCTCCGAGAAGCTTCCCCTTCTTCCACCGTCTTTTCACTTTCATCTCTCCCATGGCGGCCGGCCTCTCCGCCGCCTTAGGGCCCAAACCATTCCATCTCTTCCTTACTTCCTCCAATCTCTCCCCTAAATCCCGAACTCCGTTTCTGTTTCCACGTTCAGTCTTCCGGAACAGTAGAATCCAATGGAAGATGCGGAGAAGAACGCTGCTCACCGTCTGCGTGTTCGTTGAGGATCAGAATAGTTCCGGCGAGGTGGAGAATCTCGCCGACGAAGGATCGCCGATTATAGTCCCTCAGATCCCATCGCCTCATGTTGCAGAGAGATTGGCGAGGAAGAGATCGGAGCGCTTCACTTATCTTGTTGCTGCGGTTATGTCTAGTTTTGGAATTACCTCCATGGCTGTCATGGCGGTTTACTACCGATTTTACTGGCAAATGGAGGTCCTCTCTCTCTATCTCTCTATAGAAACTTGAATTGTTTTTGTTTTCATTGGCGCCGTATTATTCTGACTGAATATTGAATTCCGATTGTTTAATTTGGCGGTGTGTAGGGCGGAGAGATTCCTTTCTCTGAAATGTTTGGTACATTTTCTCTCTCCGTTGGTGCCGCTGTACGTTTTCAATTTCATTTCATCTCTGTATTCTCTTCTTTTCTCGAAGAATTCGATTTTCTGTAGGCTGATTTTCACAATCAATTTGGGAATATTCAGGTCGGAATGGAGTTTTGGGCAAGATGGGCGCATAGGGCTCTCTGGCACGCTTCCTTGTGGCATATGCACGAGGTATAGGTTTCTAATTCTTCTTCTCAATAGAATTTCGTTTCTGTGTTTGTCTGCTGAGAAAATTTCTATCAACAATAATCCACAATGAATCTTAATTTCATATCAAACAAACAATATTCAAAAGGGAAAAGAGAATCGTTGAGGCTTGGACTTGTTGATTGCAGCACAGTCCTTGCACTATTCCTAAACTAATCCTCCTCTCTGTAGAATTTTTCTTGTTTGGCTGCTGAGAAAATTCAATTAACAATGGACCTTTCTCTCATTTTCCTAGCAAACAAACAACATTGAATAAAAAAAGAAAAATCGTTGACGCTTGGACTTTTTTTTTTTTGGTTGATCTTTATTATTACAGTCTCACCATAAACCAAGAGAAGGACCGTTCGAATTGAACGATGTTTTCGCCATTATCAACGCCGTGCCCGCCATAGCTCTCCTTTCTTACGGCTTCTTCCATAAAGGCCTCGTCCCTGGTCTCTGCTTCGGCGCTGTAAATCTCCATATCTTTCTTCAATTTCTCTCTCATAATCTTTCAGAATCTCAGTTTGTTCATATTCTAACTATTTAATAGTTATTTAATCACTGGGGATTAGCGCTAATGACAGTGTTAAATGACGAAAATACCCCTAGAAAATGTGGTAATTGAGAAAGAGGTTTGACACGCTGGCGGGTTGTGTTGTGGCAGGGCCTTGGAATTACGGTCTTTGGGATGGCCTACATGTTCGTCCACGACGGTCTCGTTCACAAAAGATTCCTTGTGGGTCCCATTGCCAACGTGCCCTATTTTAGAAAGGTCGCTGCTGCTCACCAGGTAAATTCAATTTCTAAATTTTTATTTCTTTTTAATTTTTTTTAATGCTTAATCTTCATTCTTCCCTTAAAAAATTATCAAATTTGTTATAATTTTTATCTTATTTTGATCTCAAACTTTTGATACTGACTTTGTTTGTTCCCTTGTGTTGACTTTTCATTTAACAAAAACTCAATTATTTTTCCTAACTTTATATTTTATTTGGATCCCTAGACGTACATTTAAGATGATATTTTTTTTAAGTTGAAATCTTCATTCTCATATTTATTGTACAGGTAAATTCCATGTAGATTTCTATTAATGAAATATATGAATCTAAATATATATATATATGAAAAAACTTATTAAATAAAATTTTAAAATGTCAATTGTTTTAAAAAAAAATTAAGAATATTGAGAAATGTAGAGATAAGAAAGAACCTATAAACTTAGGGGGCGGGGGGGAATATGATTTTAAATCAACCGACTAATAAGAAATTAGCTATGGAGTATGAAAATATAATAATATTCTTAGAGTTTGGGCAATTTTTAATAATCTCGCATTAATTTATGTTTTTACGGCTGAAATTAAATACATGTGTTTTTTTTTTTTGGAGACAAAAAACATGTGTTATTAACCTGCACGTAGAAAAGTAATTACACGTATCTAAGTGTAAATCTAATTTTAAAAGATTATGTCCGATTTAAATATTGAAGCTTATGGTTTTTTTTTTCTGGCTGTAGCTTCACCATTCGGACAAGTTCAACGGTGTGCCCTACGGGCTGTTTTTGGGTCCGAAGGTCAGTTTCGGGTCTATTTATTTATCTTAAATTTTAAATTTATGGTCTTTTTTTTTTTTAATAAATGGTTTCCTAAAAAATGTTGTGGCGTTTTTTTTAATAAATGGTTTTCTCAAAAATGTTGTGGTGCAGGAACTAGAGGAAGTGGGAGGCCAAGAAGAATTGGAGAAGGAAATCAACAGAAGAATAAAATCAACGGCCACAAAATCAATCGACGGCTCTTGATTAAAGTCGATAGAGGGTTTCACTATTAATATTATGTAAAAATGAGAAGTAAAAGGGTAGAAGAATCAAGAATGAGATAGTAAATTTGGTAGAAAGGATTCGCTTTTACCGAGGAATTACCCTCTACTTTTTAGTTTTTACGGTCTAATGTGATTGTGAAGAAAAAAGAAGTCAGCCGAGAGTAAATAACACTCCATAATTTTGTGTAATTTTCGATATTTCATAATTTAATAAAATATGTAGTCATTTGAGTAGGTAAAATGGGAAAATTTCTAGTTCTACGTAGTAGGCACAATTTTTAATGTGTTTACCATTTTAAACTAATTTTTATTTGGGTCCCACCCATTTAAATAACATACACTTACACTCTCATCTCCCCAC CTCGAAATAAAAAAATTAAATCAAAATATGAAAAAGAAAATGATCGACTTTACGACCTCTTAACTAAAAATTACGAAAAAAGAAAAGTTAATAAATGAAAAAATAAAATAAAATTTATAAAAGAGAGAGAGAAATAGAAAAAATGGCAATTTCGTATATAAAGGAAGGAAGGGCAGCAAATGCTCCAACAAACTACTTCCCCATTGTTTTTTGCTCAGAGTTTTTACTCCACCACTTTACTGACAAAAACTTGTGGTCTCTGTTTCTTCAAGCTCCATTTTTAAGCCCTCTCGCCGCCGTCTCTTTCTCCGAGAAGCTTCCCCTTCTTCCACCGTCTTTTCACTTTCATCTCTCCCATGGCGGCCGGCCTCTCCGCCGCCTTAGGGCCCAAACCATTCCATCTCTTCCTTACTTCCTCCAATCTCTCCCCTAAATCCCGAACTCCGTTTCTGTTTCCACGTTCAGTCTTCCGGAACAGTAGAATCCAATGGAAGATGCGGAGAAGAACGCTGCTCACCGTCTGCGTGTTCGTTGAGGATCAGAATAGTTCCGGCGAGGTGGAGAATCTCGCCGACGAAGGATCGCCGATTATAGTCCCTCAGATCCCATCGCCTCATGTTGCAGAGAGATTGGCGAGGAAGAGATCGGAGCGCTTCACTTATCTTGTTGCTGCGGTTATGTCTAGTTTTGGAATTACCTCCATGGCTGTCATGGCGGTTTACTACCGATTTTACTGGCAAATGGAGGGCGGAGAGATTCCTTTCTCTGAAATGTTTGGTACATTTTCTCTCTCCGTTGGTGCCGCTGTCGGAATGGAGTTTTGGGCAAGATGGGCGCATAGGGCTCTCTGGCACGCTTCCTTGTGGCATATGCACGAGTCTCACCATAAACCAAGAGAAGGACCGTTCGAATTGAACGATGTTTTCGCCATTATCAACGCCGTGCCCGCCATAGCTCTCCTTTCTTACGGCTTCTTCCATAAAGGCCTCGTCCCTGGTCTCTGCTTCGGCGCTGGCCTTGGAATTACGGTCTTTGGGATGGCCTACATGTTCGTCCACGACGGTCTCGTTCACAAAAGATTCCTTGTGGGTCCCATTGCCAACGTGCCCTATTTTAGAAAGGTCGCTGCTGCTCACCAGCTTCACCATTCGGACAAGTTCAACGGTGTGCCCTACGGGCTGTTTTTGGGTCCGAAGGTCAGTTTCGGGTCTATTTATTTATCTTAAATTTTAAATTTATGGTCTTTTTTTTTTTTAATAAATGGTTTCCTAAAAAATGTTGTGGCGTTTTTTTTAATAAATGGTTTTCTCAAAAATGTTGTGGTGCAGGAACTAGAGGAAGTGGGAGGCCAAGAAGAATTGGAGAAGGAAATCAACAGAAGAATAAAATCAACGGCCACAAAATCAATCGACGGCTCTTGATTAAAGTCGATAGAGGGTTTCACTATTAATATTATGTAAAAATGAGAAGTAAAAGGGTAGAAGAATCAAGAATGAGATAGTAAATTTGGTAGAAAGGATTCGCTTTTACCGAGGAATTACCCTCTACTTTTTAGTTTTTACGGTCTAATGTGATTGTGAAGAAAAAAGAAGTCAGCCGAGAGTAAATAACACTCCATAATTTTGTGTAATTTTCGATATTTCATAATTTAATAAAATATGTAGTCATTTGAGTAGGTAAAATGGGAAAATTTCTAGTTCTACGTAGTAGGCACAATTTTTAATGTGTTTACCATTTTAAACTAATTTTTATTTGGGTCCCACCCATTTAAATAACATACACTTACACTCTCATCTCCCCAC ATGGCGGCCGGCCTCTCCGCCGCCTTAGGGCCCAAACCATTCCATCTCTTCCTTACTTCCTCCAATCTCTCCCCTAAATCCCGAACTCCGTTTCTGTTTCCACGTTCAGTCTTCCGGAACAGTAGAATCCAATGGAAGATGCGGAGAAGAACGCTGCTCACCGTCTGCGTGTTCGTTGAGGATCAGAATAGTTCCGGCGAGGTGGAGAATCTCGCCGACGAAGGATCGCCGATTATAGTCCCTCAGATCCCATCGCCTCATGTTGCAGAGAGATTGGCGAGGAAGAGATCGGAGCGCTTCACTTATCTTGTTGCTGCGGTTATGTCTAGTTTTGGAATTACCTCCATGGCTGTCATGGCGGTTTACTACCGATTTTACTGGCAAATGGAGGGCGGAGAGATTCCTTTCTCTGAAATGTTTGGTACATTTTCTCTCTCCGTTGGTGCCGCTGTCGGAATGGAGTTTTGGGCAAGATGGGCGCATAGGGCTCTCTGGCACGCTTCCTTGTGGCATATGCACGAGTCTCACCATAAACCAAGAGAAGGACCGTTCGAATTGAACGATGTTTTCGCCATTATCAACGCCGTGCCCGCCATAGCTCTCCTTTCTTACGGCTTCTTCCATAAAGGCCTCGTCCCTGGTCTCTGCTTCGGCGCTGGCCTTGGAATTACGGTCTTTGGGATGGCCTACATGTTCGTCCACGACGGTCTCGTTCACAAAAGATTCCTTGTGGGTCCCATTGCCAACGTGCCCTATTTTAGAAAGGTCGCTGCTGCTCACCAGCTTCACCATTCGGACAAGTTCAACGGTGTGCCCTACGGGCTGTTTTTGGGTCCGAAGGTCAGTTTCGGGTCTATTTATTTATCTTAA MAAGLSAALGPKPFHLFLTSSNLSPKSRTPFLFPRSVFRNSRIQWKMRRRTLLTVCVFVEDQNSSGEVENLADEGSPIIVPQIPSPHVAERLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFYWQMEGGEIPFSEMFGTFSLSVGAAVGMEFWARWAHRALWHASLWHMHESHHKPREGPFELNDVFAIINAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFLVGPIANVPYFRKVAAAHQLHHSDKFNGVPYGLFLGPKVSFGSIYLS Homology
BLAST of Tan0003703.3 vs. ExPASy Swiss-Prot
Match: O49814 (Beta-carotene hydroxylase 2, chloroplastic OS=Capsicum annuum OX=4072 GN=CA2 PE=1 SV=2) HSP 1 Score: 404.4 bits (1038), Expect = 1.0e-111 Identity = 198/257 (77.04%), Postives = 216/257 (84.05%), Query Frame = 0
BLAST of Tan0003703.3 vs. ExPASy Swiss-Prot
Match: B3SGL0 (Beta-carotene 3-hydroxylase, chloroplastic OS=Gentiana lutea OX=38851 GN=BHY PE=2 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 1.6e-107 Identity = 198/276 (71.74%), Postives = 225/276 (81.52%), Query Frame = 0
BLAST of Tan0003703.3 vs. ExPASy Swiss-Prot
Match: Q9SZZ8 (Beta-carotene 3-hydroxylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BETA-OHASE 1 PE=1 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 1.2e-102 Identity = 194/284 (68.31%), Postives = 222/284 (78.17%), Query Frame = 0
BLAST of Tan0003703.3 vs. ExPASy Swiss-Prot
Match: O49815 (Beta-carotene hydroxylase 1, chloroplastic OS=Capsicum annuum OX=4072 GN=CA1 PE=1 SV=2) HSP 1 Score: 367.9 bits (943), Expect = 1.1e-100 Identity = 183/259 (70.66%), Postives = 209/259 (80.69%), Query Frame = 0
BLAST of Tan0003703.3 vs. ExPASy Swiss-Prot
Match: Q9LTG0 (Beta-carotene 3-hydroxylase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BETA-OHASE 2 PE=2 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 2.0e-99 Identity = 192/285 (67.37%), Postives = 219/285 (76.84%), Query Frame = 0
BLAST of Tan0003703.3 vs. NCBI nr
Match: XP_022944865.1 (beta-carotene hydroxylase 2, chloroplastic-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 543.1 bits (1398), Expect = 1.4e-150 Identity = 263/280 (93.93%), Postives = 271/280 (96.79%), Query Frame = 0
BLAST of Tan0003703.3 vs. NCBI nr
Match: XP_038877448.1 (beta-carotene hydroxylase 2, chloroplastic [Benincasa hispida]) HSP 1 Score: 543.1 bits (1398), Expect = 1.4e-150 Identity = 265/280 (94.64%), Postives = 270/280 (96.43%), Query Frame = 0
BLAST of Tan0003703.3 vs. NCBI nr
Match: KAG7013258.1 (Beta-carotene 3-hydroxylase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 543.1 bits (1398), Expect = 1.4e-150 Identity = 263/280 (93.93%), Postives = 271/280 (96.79%), Query Frame = 0
BLAST of Tan0003703.3 vs. NCBI nr
Match: KAG6574199.1 (Beta-carotene 3-hydroxylase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 540.0 bits (1390), Expect = 1.2e-149 Identity = 262/280 (93.57%), Postives = 270/280 (96.43%), Query Frame = 0
BLAST of Tan0003703.3 vs. NCBI nr
Match: XP_023541483.1 (beta-carotene hydroxylase 2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 537.3 bits (1383), Expect = 7.9e-149 Identity = 259/280 (92.50%), Postives = 270/280 (96.43%), Query Frame = 0
BLAST of Tan0003703.3 vs. ExPASy TrEMBL
Match: A0A6J1FZ94 (beta-carotene hydroxylase 2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449265 PE=3 SV=1) HSP 1 Score: 543.1 bits (1398), Expect = 7.0e-151 Identity = 263/280 (93.93%), Postives = 271/280 (96.79%), Query Frame = 0
BLAST of Tan0003703.3 vs. ExPASy TrEMBL
Match: A0A0A0L606 (Fatty acid hydroxylase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G183920 PE=3 SV=1) HSP 1 Score: 535.4 bits (1378), Expect = 1.5e-148 Identity = 258/280 (92.14%), Postives = 270/280 (96.43%), Query Frame = 0
BLAST of Tan0003703.3 vs. ExPASy TrEMBL
Match: A0A6J1HX82 (beta-carotene hydroxylase 2, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467695 PE=3 SV=1) HSP 1 Score: 532.3 bits (1370), Expect = 1.2e-147 Identity = 259/280 (92.50%), Postives = 267/280 (95.36%), Query Frame = 0
BLAST of Tan0003703.3 vs. ExPASy TrEMBL
Match: G1FQR0 (Chloroplast beta-carotene hydroxylase OS=Cucurbita moschata OX=3662 GN=CHYB PE=2 SV=1) HSP 1 Score: 532.3 bits (1370), Expect = 1.2e-147 Identity = 259/280 (92.50%), Postives = 267/280 (95.36%), Query Frame = 0
BLAST of Tan0003703.3 vs. ExPASy TrEMBL
Match: A0A6J1J1S8 (beta-carotene hydroxylase 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482629 PE=3 SV=1) HSP 1 Score: 531.2 bits (1367), Expect = 2.7e-147 Identity = 259/280 (92.50%), Postives = 267/280 (95.36%), Query Frame = 0
BLAST of Tan0003703.3 vs. TAIR 10
Match: AT4G25700.1 (beta-hydroxylase 1 ) HSP 1 Score: 374.4 bits (960), Expect = 8.2e-104 Identity = 194/284 (68.31%), Postives = 222/284 (78.17%), Query Frame = 0
BLAST of Tan0003703.3 vs. TAIR 10
Match: AT5G52570.1 (beta-carotene hydroxylase 2 ) HSP 1 Score: 363.6 bits (932), Expect = 1.5e-100 Identity = 192/285 (67.37%), Postives = 219/285 (76.84%), Query Frame = 0
BLAST of Tan0003703.3 vs. TAIR 10
Match: AT4G25700.2 (beta-hydroxylase 1 ) HSP 1 Score: 255.8 bits (652), Expect = 4.3e-68 Identity = 138/223 (61.88%), Postives = 163/223 (73.09%), Query Frame = 0
BLAST of Tan0003703.3 vs. TAIR 10
Match: AT5G52570.2 (beta-carotene hydroxylase 2 ) HSP 1 Score: 202.6 bits (514), Expect = 4.3e-52 Identity = 131/285 (45.96%), Postives = 156/285 (54.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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