Tan0002226.1 (mRNA) Snake gourd v1

Overview


Name	Tan0002226.1
Type	mRNA
Organism	Trichosanthes anguina (Snake gourd v1)
Description	PRA1 family protein
Location	LG08: 3841396 .. 3842685 (+)
Sequence length	1290
RNA-Seq Expression	Tan0002226.1
Synteny	Tan0002226.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAGTAAGACAATTCAGAAACAGAACAGAACTGGAGATGGGAGTCCATTCCCATCGCTCCATTCTACAGATTCAACCCCCAAAAATTTTCCCAGAAAACTAAAACCCATTTTCCCTTTCGCCAAACAAACAAATTCTCCCCGAAAAACCCCGTCAGATCCGTCCAAATCCCACTCCCAAACCCTCAATTTTCTTCCAATGTCATCGGTCAAATTCCCCGCCGGCTACGGCACCGTACCCTCTCCGCCCGCCGCCACAATCCCCACCACTTCCGACGGAGCTCCTCCATCGTCCCCCTCCACCTCCTCCTTCCTCGAACGCGCCAAAACCACCACGCAATCCCTAATCGCCACACAGCGGCCATGGCGAGAGCTCTTCGATTTCTCCGCCTTCTCTCTCCCTTTAAGCTACGACGACGCCATGGCCAGAATCCGCCAGAACGTGAACTACTTCCGCGTCAATTACGCCTTGGTGATGCTCATCATCGTCTTCTTCAGCCTGTTCTGGCATCCGATTTCGATCATCGTCTTCTTGCTCGTTTTCGTCGCTTGGTTGTTTTTCTACTTCCTTCGCGACCAGCCTCTCATTCTCTTCAACCAAACGTTTGATGATAAAACTGTTTTGGGGGTTTTGAGCATTTTTACCATCATCGCTCTTGTTTCCACTGATGTGGGATCGAATGTTTTGGGAGCCCTAATCACAGGGGTCATCGTCGTTGGGTTGCACGCGGCGTTTCGGATTACGGCGGATCATTTTCTCGACGAGGAGACCGCTGCAGGAGGGGGATTGCTGTCGTTTGTGGGAAATCAGCAACAACAACGAGGCTACACTCGGATTTGATTCTGAAATTCTTTCGAGAATTTTGGCCATTTTGATGGGTATGTCTCAATCTCTCCAACTACAGTGAAGGTTGGATTAAATTCCTTATTGCTCGCTTGCTTGGATTCATCTTGTCATTGGAATCTGGTTTTGTGTGAAGATGCATTATCCAATTCATTTGTAGGTTTATGTCACACTGTTGTTTTTCTGGCTTGGATTGTTGTGACATTAGAGATTCTTGAGTTTGGAACTGGAAGTGGATGATGCTGGTTTTGAAGCATCAAATTTTTTCTGGGGGTTTTAAACCCCATGGCTTGATTGCTTGATTGCATTGGTGTTTATTTTCTGGATTTGGTGGAAGGCTTTTTCTCTTGCTTTTGCCTGTTTTTTTTTTCTCTCCATATGTATATGTAAAATATTCAATGATCAACAATGACTTCAGTTCATTACTCGAACATTTAGCAGGAG

mRNA sequence

AAAAAAAGTAAGACAATTCAGAAACAGAACAGAACTGGAGATGGGAGTCCATTCCCATCGCTCCATTCTACAGATTCAACCCCCAAAAATTTTCCCAGAAAACTAAAACCCATTTTCCCTTTCGCCAAACAAACAAATTCTCCCCGAAAAACCCCGTCAGATCCGTCCAAATCCCACTCCCAAACCCTCAATTTTCTTCCAATGTCATCGGTCAAATTCCCCGCCGGCTACGGCACCGTACCCTCTCCGCCCGCCGCCACAATCCCCACCACTTCCGACGGAGCTCCTCCATCGTCCCCCTCCACCTCCTCCTTCCTCGAACGCGCCAAAACCACCACGCAATCCCTAATCGCCACACAGCGGCCATGGCGAGAGCTCTTCGATTTCTCCGCCTTCTCTCTCCCTTTAAGCTACGACGACGCCATGGCCAGAATCCGCCAGAACGTGAACTACTTCCGCGTCAATTACGCCTTGGTGATGCTCATCATCGTCTTCTTCAGCCTGTTCTGGCATCCGATTTCGATCATCGTCTTCTTGCTCGTTTTCGTCGCTTGGTTGTTTTTCTACTTCCTTCGCGACCAGCCTCTCATTCTCTTCAACCAAACGTTTGATGATAAAACTGTTTTGGGGGTTTTGAGCATTTTTACCATCATCGCTCTTGTTTCCACTGATGTGGGATCGAATGTTTTGGGAGCCCTAATCACAGGGGTCATCGTCGTTGGGTTGCACGCGGCGTTTCGGATTACGGCGGATCATTTTCTCGACGAGGAGACCGCTGCAGGAGGGGGATTGCTGTCGTTTGTGGGAAATCAGCAACAACAACGAGGCTACACTCGGATTTGATTCTGAAATTCTTTCGAGAATTTTGGCCATTTTGATGGGTATGTCTCAATCTCTCCAACTACAGTGAAGGTTGGATTAAATTCCTTATTGCTCGCTTGCTTGGATTCATCTTGTCATTGGAATCTGGTTTTGTGTGAAGATGCATTATCCAATTCATTTGTAGGTTTATGTCACACTGTTGTTTTTCTGGCTTGGATTGTTGTGACATTAGAGATTCTTGAGTTTGGAACTGGAAGTGGATGATGCTGGTTTTGAAGCATCAAATTTTTTCTGGGGGTTTTAAACCCCATGGCTTGATTGCTTGATTGCATTGGTGTTTATTTTCTGGATTTGGTGGAAGGCTTTTTCTCTTGCTTTTGCCTGTTTTTTTTTTCTCTCCATATGTATATGTAAAATATTCAATGATCAACAATGACTTCAGTTCATTACTCGAACATTTAGCAGGAG

Coding sequence (CDS)

ATGTCATCGGTCAAATTCCCCGCCGGCTACGGCACCGTACCCTCTCCGCCCGCCGCCACAATCCCCACCACTTCCGACGGAGCTCCTCCATCGTCCCCCTCCACCTCCTCCTTCCTCGAACGCGCCAAAACCACCACGCAATCCCTAATCGCCACACAGCGGCCATGGCGAGAGCTCTTCGATTTCTCCGCCTTCTCTCTCCCTTTAAGCTACGACGACGCCATGGCCAGAATCCGCCAGAACGTGAACTACTTCCGCGTCAATTACGCCTTGGTGATGCTCATCATCGTCTTCTTCAGCCTGTTCTGGCATCCGATTTCGATCATCGTCTTCTTGCTCGTTTTCGTCGCTTGGTTGTTTTTCTACTTCCTTCGCGACCAGCCTCTCATTCTCTTCAACCAAACGTTTGATGATAAAACTGTTTTGGGGGTTTTGAGCATTTTTACCATCATCGCTCTTGTTTCCACTGATGTGGGATCGAATGTTTTGGGAGCCCTAATCACAGGGGTCATCGTCGTTGGGTTGCACGCGGCGTTTCGGATTACGGCGGATCATTTTCTCGACGAGGAGACCGCTGCAGGAGGGGGATTGCTGTCGTTTGTGGGAAATCAGCAACAACAACGAGGCTACACTCGGATTTGA

Protein sequence

MSSVKFPAGYGTVPSPPAATIPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLFFYFLRDQPLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFRITADHFLDEETAAGGGLLSFVGNQQQQRGYTRI

Homology

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BLAST of Tan0002226.1 vs. ExPASy Swiss-Prot
Match: Q9FRR1 (PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 9.3e-41
Identity = 99/204 (48.53%), Postives = 132/204 (64.71%), Query Frame = 0


Query: 16  PPAATIPTTSDGAPPSSPSTSSFL----ERAKTTTQSLIATQRPWRELFDFSAFSLPLSY 75
           PP         G  PSS S ++ +     RAK TTQS+I T RPWRE+ D SA SLP  Y
Sbjct: 6   PPYGYGGAGGGGVGPSSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLPRGY 65

Query: 76  DDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLFFYFLRD--QPL 135
           D+AMA ++ N++YFR NYAL +L IVF  L +HP+S+I F++VF+ W+  YF RD    +
Sbjct: 66  DEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSI 125

Query: 136 ILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFRITADHFLDE 195
           ++  +  DDK VL +LS+ T++ALV TDVG NVL +LI G+++VG H AFR T D FLDE
Sbjct: 126 VISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDE 185

Query: 196 ETAAGGGLLSFVGNQQQQRGYTRI 214
           E+A  GGL+S     +    YT I
Sbjct: 186 ESARRGGLVSAGSGNRPPSSYTPI 209

[Close]

BLAST of Tan0002226.1 vs. ExPASy Swiss-Prot
Match: Q9LIC6 (PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.9e-36
Identity = 86/182 (47.25%), Postives = 122/182 (67.03%), Query Frame = 0


Query: 21  IPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLSYDDAMARIRQ 80
           IPT+S  +P     +   L RAK   ++ +AT+R WR +FDF +  LP    DA  RI+ 
Sbjct: 7   IPTSSHASPLVDVES---LSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKT 66

Query: 81  NVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLFFYFLRDQPLILFNQTFDDKT 140
           N+ YFR+NYA+V+LI++FFSL WHP S+IVF ++ V W+F YFLRD+P+ LF    DD+T
Sbjct: 67  NLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRT 126

Query: 141 VLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFRITADHFLDEE--TAAGGGLL 200
           VL VLS+ T++ L+ T+   N++GAL+TG ++V +H+  R T D FLDEE  T    GL 
Sbjct: 127 VLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAATTETSGLT 185

[Close]

BLAST of Tan0002226.1 vs. ExPASy Swiss-Prot
Match: Q9C889 (PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.2e-34
Identity = 83/183 (45.36%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 21  IPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLSYDDAMARIRQ 80
           IPT+S    PS      ++ RAK   +S +AT+RPW+ +FDF + +LP  + DA++RI+ 
Sbjct: 7   IPTSSH---PSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKT 66

Query: 81  NVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLFFYFLRDQPLILFNQTFDDKT 140
           N+ YFR NYA+ +L I+F SL +HP S+IV  ++ V W+F YFLRD+PL++F    DD+T
Sbjct: 67  NLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRT 126

Query: 141 VLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFRITADHFLDEETAA---GGGL 200
           VL  LS+ T++ L+ T   SN+LG+L+T  ++V +HAA R + + FLDEE AA     GL
Sbjct: 127 VLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGL 186

[Close]

BLAST of Tan0002226.1 vs. ExPASy Swiss-Prot
Match: Q9FLB6 (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.7e-31
Identity = 83/194 (42.78%), Postives = 119/194 (61.34%), Query Frame = 0


Query: 15  SPPAATIPTTSDGA-----PPSSPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPL 74
           +PP   I   S G      P S+P+  +FL R  ++ +  ++ +RPW EL D SA S P 
Sbjct: 4   NPPTLPISDHSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPE 63

Query: 75  SYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLFFYFLR--DQ 134
           S  DA +RIR+N+ YF+VNY  ++ +++  SL  HP S++V L +F AW+F Y  R  DQ
Sbjct: 64  SLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQ 123

Query: 135 PLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFRITADHFL 194
           PL++  +TF D+  LGVL I TI+ +  T VGS +  AL+ G  +V LH AFR+  D FL
Sbjct: 124 PLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFL 183

Query: 195 DEETAAGGGLLSFV 202
           D++  A  GLLSF+
Sbjct: 184 DDQEPANTGLLSFL 197

[Close]

BLAST of Tan0002226.1 vs. ExPASy Swiss-Prot
Match: Q9SIY7 (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.7e-30
Identity = 81/196 (41.33%), Postives = 119/196 (60.71%), Query Frame = 0


Query: 15  SPPAATIPTTSDGAPPSSPSTSS-----FLERAKTTTQSLIATQRPWRELFDFSAFSLPL 74
           S PA    T    A  S P  +S     FL R  ++ +  ++ +RPW EL D S+F+ P 
Sbjct: 3   SSPAILPVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPD 62

Query: 75  SYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLFFYFLR--DQ 134
           S  D+ +RIR+N+ YF+VNY+ ++ +++ FSL  HP S++V L +  +W+F Y  R  DQ
Sbjct: 63  SLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQ 122

Query: 135 PLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFRITADHFL 194
           PL+LF ++F D+  L  L + TI+ +  T VGS +  AL  G+ +V LH AFR+  D FL
Sbjct: 123 PLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFL 182

Query: 195 DEETAAGGGLLSFVGN 204
           DE+  A  GLLSF+GN
Sbjct: 183 DEQEPANAGLLSFIGN 198

[Close]

BLAST of Tan0002226.1 vs. NCBI nr
Match: KAA0063596.1 (PRA1 family protein E [Cucumis melo var. makuwa] >TYK18431.1 PRA1 family protein E [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 3.0e-97
Identity = 196/213 (92.02%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 1   MSSVKFPAGYGTVPSPPAATIPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKF +GYG VPSP AATIPTTS GAPP  PS+SSFLERAKTTTQSLIATQRPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP SYDDAMARIRQNVNYFRVNYALVMLIIVF SLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFR 180
           FYF RDQPL+LFNQTFDDK VLGVLSIFTIIALVSTDVGSNVLGALITGV VVGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEETAAGGGLLSFVGNQQQQRGYTRI 214
           ITADHFLDEETAA GGLLS VGNQQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Tan0002226.1 vs. NCBI nr
Match: XP_004139244.1 (PRA1 family protein E [Cucumis sativus] >KGN60794.1 hypothetical protein Csa_019504 [Cucumis sativus])

HSP 1 Score: 363.2 bits (931), Expect = 1.5e-96
Identity = 195/213 (91.55%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 1   MSSVKFPAGYGTVPSPPAATIPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKF +GYG VPS  AATIPTTS GAPPS PS+SSFLERAKTTTQSLIATQRPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSQAAATIPTTSSGAPPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP SYDDAMARIRQNVNYFRVNYALVMLIIVF SLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFR 180
           FYF RDQPL+LFNQTFDDK VLGVLSIFTIIALVSTDVGSNVLGALITGV VVGLH+AFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVTVVGLHSAFR 180

Query: 181 ITADHFLDEETAAGGGLLSFVGNQQQQRGYTRI 214
           ITADHFLDEETAA GGLLS VGNQQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Tan0002226.1 vs. NCBI nr
Match: XP_008456115.1 (PREDICTED: PRA1 family protein E [Cucumis melo] >XP_008456124.1 PREDICTED: PRA1 family protein E [Cucumis melo])

HSP 1 Score: 362.8 bits (930), Expect = 2.0e-96
Identity = 195/213 (91.55%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MSSVKFPAGYGTVPSPPAATIPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKF +GYG VPSP AATIPTTS GAPP  PS+SSFLERAKTTTQSLIAT RPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATLRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP SYDDAMARIRQNVNYFRVNYALVMLIIVF SLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFR 180
           FYF RDQPL+LFNQTFDDK VLGVLSIFTIIALVSTDVGSNVLGALITGV VVGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEETAAGGGLLSFVGNQQQQRGYTRI 214
           ITADHFLDEETAA GGLLS VGNQQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Tan0002226.1 vs. NCBI nr
Match: XP_038891239.1 (PRA1 family protein F3 [Benincasa hispida])

HSP 1 Score: 362.8 bits (930), Expect = 2.0e-96
Identity = 194/213 (91.08%), Postives = 198/213 (92.96%), Query Frame = 0


Query: 1   MSSVKFPAGYGTVPSPPAATIPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MSS KF  GYG VPSP AATIPTTS GAPPS PS+SSFLERAK TTQSLIATQRPWRELF
Sbjct: 1   MSSAKFSTGYGAVPSPAAATIPTTSSGAPPSLPSSSSFLERAKITTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLPL+YDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHP SIIVFLL+FVAW F
Sbjct: 61  DFSAFSLPLNYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPFSIIVFLLIFVAWFF 120

Query: 121 FYFLRDQPLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFR 180
           FYF RDQPL+LFNQTFDDK VLGVLSIFTIIALVSTDVGSNVLGALITGV VVGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEETAAGGGLLSFVGNQQQQRGYTRI 214
           ITADHFLDEETAA GGLLS VGNQQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Tan0002226.1 vs. NCBI nr
Match: XP_022142976.1 (PRA1 family protein E [Momordica charantia])

HSP 1 Score: 342.0 bits (876), Expect = 3.6e-90
Identity = 188/212 (88.68%), Postives = 192/212 (90.57%), Query Frame = 0


Query: 2   SSVKFPAGYGTVPSPPAATIPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELFD 61
           SSVKF  GY T+ SPPAATIP  S  APPS  S+SSFLERAK TTQSLIATQRPWREL D
Sbjct: 5   SSVKFSVGYSTLSSPPAATIPVISAEAPPSL-SSSSFLERAKNTTQSLIATQRPWRELLD 64

Query: 62  FSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLFF 121
           FSAFSLPL YDDAMARIRQNVNYFRVNYALVMLIIV FSLFWHPISIIVFLLVFV WLFF
Sbjct: 65  FSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFF 124

Query: 122 YFLRDQPLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFRI 181
           YFLRD PL+LFNQTFDDK VLGVLSI TIIALVSTDVGSNVLGALITGV+VVGLHAAFRI
Sbjct: 125 YFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRI 184

Query: 182 TADHFLDEETAAGGGLLSFVGNQQQQRGYTRI 214
           TADHFLDEETAAGGGLLS VGNQQ QRGYTRI
Sbjct: 185 TADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 215

[Close]

BLAST of Tan0002226.1 vs. ExPASy TrEMBL
Match: A0A5A7VAZ9 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001570 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.5e-97
Identity = 196/213 (92.02%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 1   MSSVKFPAGYGTVPSPPAATIPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKF +GYG VPSP AATIPTTS GAPP  PS+SSFLERAKTTTQSLIATQRPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP SYDDAMARIRQNVNYFRVNYALVMLIIVF SLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFR 180
           FYF RDQPL+LFNQTFDDK VLGVLSIFTIIALVSTDVGSNVLGALITGV VVGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEETAAGGGLLSFVGNQQQQRGYTRI 214
           ITADHFLDEETAA GGLLS VGNQQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Tan0002226.1 vs. ExPASy TrEMBL
Match: A0A0A0LIB9 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G010300 PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 7.3e-97
Identity = 195/213 (91.55%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 1   MSSVKFPAGYGTVPSPPAATIPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKF +GYG VPS  AATIPTTS GAPPS PS+SSFLERAKTTTQSLIATQRPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSQAAATIPTTSSGAPPSFPSSSSFLERAKTTTQSLIATQRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP SYDDAMARIRQNVNYFRVNYALVMLIIVF SLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFR 180
           FYF RDQPL+LFNQTFDDK VLGVLSIFTIIALVSTDVGSNVLGALITGV VVGLH+AFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVTVVGLHSAFR 180

Query: 181 ITADHFLDEETAAGGGLLSFVGNQQQQRGYTRI 214
           ITADHFLDEETAA GGLLS VGNQQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Tan0002226.1 vs. ExPASy TrEMBL
Match: A0A1S3C2L3 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103496149 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 9.5e-97
Identity = 195/213 (91.55%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MSSVKFPAGYGTVPSPPAATIPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MSSVKF +GYG VPSP AATIPTTS GAPP  PS+SSFLERAKTTTQSLIAT RPWRELF
Sbjct: 1   MSSVKFSSGYGAVPSPAAATIPTTSSGAPPPFPSSSSFLERAKTTTQSLIATLRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP SYDDAMARIRQNVNYFRVNYALVMLIIVF SLFWHPISIIVFLL+FVAWLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVNYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVAWLF 120

Query: 121 FYFLRDQPLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFR 180
           FYF RDQPL+LFNQTFDDK VLGVLSIFTIIALVSTDVGSNVLGALITGV VVGLHAAFR
Sbjct: 121 FYFFRDQPLVLFNQTFDDKVVLGVLSIFTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEETAAGGGLLSFVGNQQQQRGYTRI 214
           ITADHFLDEETAA GGLLS VGNQQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQRGYTRI 213

[Close]

BLAST of Tan0002226.1 vs. ExPASy TrEMBL
Match: A0A6J1CNT6 (PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111012974 PE=3 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.7e-90
Identity = 188/212 (88.68%), Postives = 192/212 (90.57%), Query Frame = 0


Query: 2   SSVKFPAGYGTVPSPPAATIPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELFD 61
           SSVKF  GY T+ SPPAATIP  S  APPS  S+SSFLERAK TTQSLIATQRPWREL D
Sbjct: 5   SSVKFSVGYSTLSSPPAATIPVISAEAPPSL-SSSSFLERAKNTTQSLIATQRPWRELLD 64

Query: 62  FSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLFF 121
           FSAFSLPL YDDAMARIRQNVNYFRVNYALVMLIIV FSLFWHPISIIVFLLVFV WLFF
Sbjct: 65  FSAFSLPLGYDDAMARIRQNVNYFRVNYALVMLIIVLFSLFWHPISIIVFLLVFVGWLFF 124

Query: 122 YFLRDQPLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFRI 181
           YFLRD PL+LFNQTFDDK VLGVLSI TIIALVSTDVGSNVLGALITGV+VVGLHAAFRI
Sbjct: 125 YFLRDDPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVVVVGLHAAFRI 184

Query: 182 TADHFLDEETAAGGGLLSFVGNQQQQRGYTRI 214
           TADHFLDEETAAGGGLLS VGNQQ QRGYTRI
Sbjct: 185 TADHFLDEETAAGGGLLSVVGNQQPQRGYTRI 215

[Close]

BLAST of Tan0002226.1 vs. ExPASy TrEMBL
Match: A0A6J1G2T7 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111450303 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 9.5e-89
Identity = 187/214 (87.38%), Postives = 194/214 (90.65%), Query Frame = 0


Query: 1   MSSVKFPAGYGTVPSPPAATIPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELF 60
           MS VKF AGYGTVPSP A    +TS G PPS PS+SSFLERAK+TTQSLIAT+RPWRELF
Sbjct: 1   MSPVKFSAGYGTVPSPAA----STSAGVPPSFPSSSSFLERAKSTTQSLIATRRPWRELF 60

Query: 61  DFSAFSLPLSYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLF 120
           DFSAFSLP SYDDAMARIRQNV+YFRVNYALVMLIIVF SLFWHPISIIVFLL+FV WLF
Sbjct: 61  DFSAFSLPFSYDDAMARIRQNVDYFRVNYALVMLIIVFLSLFWHPISIIVFLLIFVGWLF 120

Query: 121 FYFLRDQPLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFR 180
            YFLRDQPL+LFNQTFDDK VLGVLSI TIIALVSTDVGSNVLGALITGV VVGLHAAFR
Sbjct: 121 CYFLRDQPLVLFNQTFDDKIVLGVLSIVTIIALVSTDVGSNVLGALITGVAVVGLHAAFR 180

Query: 181 ITADHFLDEETAAGGGLLSFVGN-QQQQRGYTRI 214
           ITADHFLDEETAA GGLLS VGN QQQQRGYTRI
Sbjct: 181 ITADHFLDEETAAEGGLLSVVGNQQQQQRGYTRI 210

[Close]

BLAST of Tan0002226.1 vs. TAIR 10
Match: AT1G08770.1 (prenylated RAB acceptor 1.E )

HSP 1 Score: 168.3 bits (425), Expect = 6.6e-42
Identity = 99/204 (48.53%), Postives = 132/204 (64.71%), Query Frame = 0


Query: 16  PPAATIPTTSDGAPPSSPSTSSFL----ERAKTTTQSLIATQRPWRELFDFSAFSLPLSY 75
           PP         G  PSS S ++ +     RAK TTQS+I T RPWRE+ D SA SLP  Y
Sbjct: 6   PPYGYGGAGGGGVGPSSTSNTTIIGTLSARAKQTTQSMITTLRPWREILDLSALSLPRGY 65

Query: 76  DDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLFFYFLRD--QPL 135
           D+AMA ++ N++YFR NYAL +L IVF  L +HP+S+I F++VF+ W+  YF RD    +
Sbjct: 66  DEAMAHLKHNISYFRGNYALAVLAIVFLGLIYHPMSMIAFIVVFIGWILLYFSRDANDSI 125

Query: 136 ILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFRITADHFLDE 195
           ++  +  DDK VL +LS+ T++ALV TDVG NVL +LI G+++VG H AFR T D FLDE
Sbjct: 126 VISGKEVDDKIVLVLLSLVTVLALVYTDVGENVLVSLIIGLLIVGAHGAFRNTDDLFLDE 185

Query: 196 ETAAGGGLLSFVGNQQQQRGYTRI 214
           E+A  GGL+S     +    YT I
Sbjct: 186 ESARRGGLVSAGSGNRPPSSYTPI 209

[Close]

BLAST of Tan0002226.1 vs. TAIR 10
Match: AT3G13720.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 152.1 bits (383), Expect = 4.9e-37
Identity = 86/182 (47.25%), Postives = 122/182 (67.03%), Query Frame = 0


Query: 21  IPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLSYDDAMARIRQ 80
           IPT+S  +P     +   L RAK   ++ +AT+R WR +FDF +  LP    DA  RI+ 
Sbjct: 7   IPTSSHASPLVDVES---LSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKT 66

Query: 81  NVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLFFYFLRDQPLILFNQTFDDKT 140
           N+ YFR+NYA+V+LI++FFSL WHP S+IVF ++ V W+F YFLRD+P+ LF    DD+T
Sbjct: 67  NLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRT 126

Query: 141 VLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFRITADHFLDEE--TAAGGGLL 200
           VL VLS+ T++ L+ T+   N++GAL+TG ++V +H+  R T D FLDEE  T    GL 
Sbjct: 127 VLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAATTETSGLT 185

[Close]

BLAST of Tan0002226.1 vs. TAIR 10
Match: AT1G55190.1 (PRA1 (Prenylated rab acceptor) family protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-35
Identity = 83/183 (45.36%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 21  IPTTSDGAPPSSPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPLSYDDAMARIRQ 80
           IPT+S    PS      ++ RAK   +S +AT+RPW+ +FDF + +LP  + DA++RI+ 
Sbjct: 7   IPTSSH---PSPAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKT 66

Query: 81  NVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLFFYFLRDQPLILFNQTFDDKT 140
           N+ YFR NYA+ +L I+F SL +HP S+IV  ++ V W+F YFLRD+PL++F    DD+T
Sbjct: 67  NLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRT 126

Query: 141 VLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFRITADHFLDEETAA---GGGL 200
           VL  LS+ T++ L+ T   SN+LG+L+T  ++V +HAA R + + FLDEE AA     GL
Sbjct: 127 VLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGL 186

[Close]

BLAST of Tan0002226.1 vs. TAIR 10
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3 )

HSP 1 Score: 135.6 bits (340), Expect = 4.8e-32
Identity = 83/194 (42.78%), Postives = 119/194 (61.34%), Query Frame = 0


Query: 15  SPPAATIPTTSDGA-----PPSSPSTSSFLERAKTTTQSLIATQRPWRELFDFSAFSLPL 74
           +PP   I   S G      P S+P+  +FL R  ++ +  ++ +RPW EL D SA S P 
Sbjct: 4   NPPTLPISDHSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPE 63

Query: 75  SYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLFFYFLR--DQ 134
           S  DA +RIR+N+ YF+VNY  ++ +++  SL  HP S++V L +F AW+F Y  R  DQ
Sbjct: 64  SLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQ 123

Query: 135 PLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFRITADHFL 194
           PL++  +TF D+  LGVL I TI+ +  T VGS +  AL+ G  +V LH AFR+  D FL
Sbjct: 124 PLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFL 183

Query: 195 DEETAAGGGLLSFV 202
           D++  A  GLLSF+
Sbjct: 184 DDQEPANTGLLSFL 197

[Close]

BLAST of Tan0002226.1 vs. TAIR 10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2 )

HSP 1 Score: 131.7 bits (330), Expect = 6.9e-31
Identity = 81/196 (41.33%), Postives = 119/196 (60.71%), Query Frame = 0


Query: 15  SPPAATIPTTSDGAPPSSPSTSS-----FLERAKTTTQSLIATQRPWRELFDFSAFSLPL 74
           S PA    T    A  S P  +S     FL R  ++ +  ++ +RPW EL D S+F+ P 
Sbjct: 3   SSPAILPVTNQQAATQSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPD 62

Query: 75  SYDDAMARIRQNVNYFRVNYALVMLIIVFFSLFWHPISIIVFLLVFVAWLFFYFLR--DQ 134
           S  D+ +RIR+N+ YF+VNY+ ++ +++ FSL  HP S++V L +  +W+F Y  R  DQ
Sbjct: 63  SLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQ 122

Query: 135 PLILFNQTFDDKTVLGVLSIFTIIALVSTDVGSNVLGALITGVIVVGLHAAFRITADHFL 194
           PL+LF ++F D+  L  L + TI+ +  T VGS +  AL  G+ +V LH AFR+  D FL
Sbjct: 123 PLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFL 182

Query: 195 DEETAAGGGLLSFVGN 204
           DE+  A  GLLSF+GN
Sbjct: 183 DEQEPANAGLLSFIGN 198

The following BLAST results are available for this feature:

BLAST of Tan0002226.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FRR1	9.3e-41	48.53	PRA1 family protein E OS=Arabidopsis thaliana OX=3702 GN=PRA1E PE=1 SV=1	[more]
Q9LIC6	6.9e-36	47.25	PRA1 family protein F3 OS=Arabidopsis thaliana OX=3702 GN=PRA1F3 PE=1 SV=1	[more]
Q9C889	2.2e-34	45.36	PRA1 family protein F2 OS=Arabidopsis thaliana OX=3702 GN=PRA1F2 PE=1 SV=1	[more]
Q9FLB6	6.7e-31	42.78	PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1	[more]
Q9SIY7	9.7e-30	41.33	PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1	[more]

BLAST of Tan0002226.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063596.1	3.0e-97	92.02	PRA1 family protein E [Cucumis melo var. makuwa] >TYK18431.1 PRA1 family protein...	[more]
XP_004139244.1	1.5e-96	91.55	PRA1 family protein E [Cucumis sativus] >KGN60794.1 hypothetical protein Csa_019...	[more]
XP_008456115.1	2.0e-96	91.55	PREDICTED: PRA1 family protein E [Cucumis melo] >XP_008456124.1 PREDICTED: PRA1 ...	[more]
XP_038891239.1	2.0e-96	91.08	PRA1 family protein F3 [Benincasa hispida]	[more]
XP_022142976.1	3.6e-90	88.68	PRA1 family protein E [Momordica charantia]	[more]

BLAST of Tan0002226.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VAZ9	1.5e-97	92.02	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G...	[more]
A0A0A0LIB9	7.3e-97	91.55	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G010300 PE=3 SV=1	[more]
A0A1S3C2L3	9.5e-97	91.55	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103496149 PE=3 SV=1	[more]
A0A6J1CNT6	1.7e-90	88.68	PRA1 family protein OS=Momordica charantia OX=3673 GN=LOC111012974 PE=3 SV=1	[more]
A0A6J1G2T7	9.5e-89	87.38	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111450303 PE=3 SV=1	[more]

BLAST of Tan0002226.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08770.1	6.6e-42	48.53	prenylated RAB acceptor 1.E	[more]
AT3G13720.1	4.9e-37	47.25	PRA1 (Prenylated rab acceptor) family protein	[more]
AT1G55190.1	1.6e-35	45.36	PRA1 (Prenylated rab acceptor) family protein	[more]
AT5G05380.1	4.8e-32	42.78	prenylated RAB acceptor 1.B3	[more]
AT2G40380.1	6.9e-31	41.33	prenylated RAB acceptor 1.B2	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 50..190 e-value: 1.2E-46 score: 157.8
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 30..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..37
None	No IPR available	PANTHER	PTHR19317:SF13	PRA1 FAMILY PROTEIN	coord: 30..210

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Tan0002226	Tan0002226	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002226.1-five_prime_utr	Tan0002226.1-five_prime_utr-LG08:3841396..3841596	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002226.1-exon	Tan0002226.1-exon-LG08:3841396..3842685	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002226.1-cds	Tan0002226.1-cds-LG08:3841597..3842238	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Tan0002226.1-three_prime_utr	Tan0002226.1-three_prime_utr-LG08:3842239..3842685	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Tan0002226.1	Tan0002226.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane