Tan0000262.1 (mRNA) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGAAAAGGATGGATTGATTTTGAAATGGGGGAAGCACAAACACGGAATCATCATTAATCCCGGTTTGCAAGTGGCGGAAGAAAGTCCGGTAACGGCGGAAGAAATTCCGGTAACGGCGGCGGCGGAGTTGCCTAGGAATCTAAGGCCAAGAAATAGAACCGTTGCGCCGGAGACGAAAGAGAATAATAAGAAGGAAGTGTCGGTGGATGAAAAGAGGAATTTGATAAGACCGAAAATGGCGAAGAAGAATGAGCCATTGTTGAAACTGGCGGTGCCGCTGTCCAAGTCTGAGATTGCCCTCGATTTCTTCAACATGACTGGGAAGAAGCCGCCATCAAGGCCCAAGAGGAGGCCTAGACCCGTTCAGCGAGACGTTGAACTTGTAATTCCTCATTCTTCTATCCTTTATTATTCATCATCTCAATTTCATATCTTAGGGGCTTTTTCCGAAAACTTTTAATACCACCGTAGTACATACTCCTCTGAGTTTTAGGGATTTAATGTTGGTGGACCCCACATAATTTTTGAGTAGACCTATATAATTTTCAAAATGATGTCGACGTGGCAAATATTCAATGGAGGTATAGTACGTAAAGTACAATAAATTTTTCTTAAAAATAGAGTTGAAGAAGAAATTAATAAGTTTGTAGGGCCTACAAGATGAAGTTGAATGATGAGTAAATATGTTTGTGGAGTCCACAATAGGAGTTAGAAAATACTTTGGCCAAATAAGAAGTTTTTAACTCCTTCCCAACTTTATCCCAAATCCAAACACCTCTTAAAAGACTCTTTAGAACATTAGATGTGTTATAATAGTATGTAAATTATATAATCTATATTTAGGGTGCAAAATTATTAACTGACTATTATAACACAAGTTATTCGAACATGCACTCCCAACATATCTTTGGTGATAGATTGGAACACTTAATGAATTTTAATAGCCAATAAAATTATAGAACATGTGTTTAGGGGCAGAGTTGTTTAATCTAAATTATATATAATTCGTGTATAGTCTAAAATAATTTGAGACATTGATAAAAAATAGACCCTCTAGATTTATGAAGCCTTGGCAATCGCTTCATTTGTCTATAGACCTTCAAACGAGATTGAGTTTTAATTCCATTAAGGAGTCTGAAAATACACCATTATTTTATGTTGCAGACTACATATCTTGGATTGAGTTTGGCAGAGATTCCGAGAGATAGATACGAGGTTCCTGAATCACCACCTTACACAAACAAGGTAAGAGCTCATTCCAAATACTATATTTTCAATATTAAAGTAGGTTTTTAA ATGAGGGAAAAGGATGGATTGATTTTGAAATGGGGGAAGCACAAACACGGAATCATCATTAATCCCGGTTTGCAAGTGGCGGAAGAAAGTCCGGTAACGGCGGAAGAAATTCCGGTAACGGCGGCGGCGGAGTTGCCTAGGAATCTAAGGCCAAGAAATAGAACCGTTGCGCCGGAGACGAAAGAGAATAATAAGAAGGAAGTGTCGGTGGATGAAAAGAGGAATTTGATAAGACCGAAAATGGCGAAGAAGAATGAGCCATTGTTGAAACTGGCGGTGCCGCTGTCCAAGTCTGAGATTGCCCTCGATTTCTTCAACATGACTGGGAAGAAGCCGCCATCAAGGCCCAAGAGGAGGCCTAGACCCGTTCAGCGAGACACTACATATCTTGGATTGAGTTTGGCAGAGATTCCGAGAGATAGATACGAGGTTCCTGAATCACCACCTTACACAAACAAGGTAAGAGCTCATTCCAAATACTATATTTTCAATATTAAAGTAGGTTTTTAA ATGAGGGAAAAGGATGGATTGATTTTGAAATGGGGGAAGCACAAACACGGAATCATCATTAATCCCGGTTTGCAAGTGGCGGAAGAAAGTCCGGTAACGGCGGAAGAAATTCCGGTAACGGCGGCGGCGGAGTTGCCTAGGAATCTAAGGCCAAGAAATAGAACCGTTGCGCCGGAGACGAAAGAGAATAATAAGAAGGAAGTGTCGGTGGATGAAAAGAGGAATTTGATAAGACCGAAAATGGCGAAGAAGAATGAGCCATTGTTGAAACTGGCGGTGCCGCTGTCCAAGTCTGAGATTGCCCTCGATTTCTTCAACATGACTGGGAAGAAGCCGCCATCAAGGCCCAAGAGGAGGCCTAGACCCGTTCAGCGAGACACTACATATCTTGGATTGAGTTTGGCAGAGATTCCGAGAGATAGATACGAGGTTCCTGAATCACCACCTTACACAAACAAGGTAAGAGCTCATTCCAAATACTATATTTTCAATATTAAAGTAGGTTTTTAA MREKDGLILKWGKHKHGIIINPGLQVAEESPVTAEEIPVTAAAELPRNLRPRNRTVAPETKENNKKEVSVDEKRNLIRPKMAKKNEPLLKLAVPLSKSEIALDFFNMTGKKPPSRPKRRPRPVQRDTTYLGLSLAEIPRDRYEVPESPPYTNKVRAHSKYYIFNIKVGF Homology
BLAST of Tan0000262.1 vs. NCBI nr
Match: XP_038875002.1 (uncharacterized protein LOC120067524 [Benincasa hispida]) HSP 1 Score: 128.3 bits (321), Expect = 6.5e-26 Identity = 75/161 (46.58%), Postives = 97/161 (60.25%), Query Frame = 0
BLAST of Tan0000262.1 vs. NCBI nr
Match: XP_010096359.1 (uncharacterized protein LOC21403972 [Morus notabilis] >EXB63834.1 hypothetical protein L484_021107 [Morus notabilis]) HSP 1 Score: 74.7 bits (182), Expect = 8.5e-10 Identity = 52/125 (41.60%), Postives = 70/125 (56.00%), Query Frame = 0
BLAST of Tan0000262.1 vs. NCBI nr
Match: XP_019426758.1 (PREDICTED: uncharacterized protein LOC109335132 isoform X2 [Lupinus angustifolius]) HSP 1 Score: 72.4 bits (176), Expect = 4.2e-09 Identity = 63/168 (37.50%), Postives = 85/168 (50.60%), Query Frame = 0
BLAST of Tan0000262.1 vs. NCBI nr
Match: XP_022152263.1 (uncharacterized protein LOC111020030 [Momordica charantia]) HSP 1 Score: 72.0 bits (175), Expect = 5.5e-09 Identity = 55/144 (38.19%), Postives = 73/144 (50.69%), Query Frame = 0
BLAST of Tan0000262.1 vs. NCBI nr
Match: XP_028768246.1 (uncharacterized protein LOC114725842 [Prosopis alba] >XP_028777293.1 uncharacterized protein LOC114733984 [Prosopis alba] >XP_028777294.1 uncharacterized protein LOC114733985 [Prosopis alba]) HSP 1 Score: 70.1 bits (170), Expect = 2.1e-08 Identity = 52/139 (37.41%), Postives = 70/139 (50.36%), Query Frame = 0
BLAST of Tan0000262.1 vs. ExPASy TrEMBL
Match: W9RC34 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021107 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 4.1e-10 Identity = 52/125 (41.60%), Postives = 70/125 (56.00%), Query Frame = 0
BLAST of Tan0000262.1 vs. ExPASy TrEMBL
Match: A0A6J1DED9 (uncharacterized protein LOC111020030 OS=Momordica charantia OX=3673 GN=LOC111020030 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.7e-09 Identity = 55/144 (38.19%), Postives = 73/144 (50.69%), Query Frame = 0
BLAST of Tan0000262.1 vs. ExPASy TrEMBL
Match: G7IC98 (DUF1639 family protein OS=Medicago truncatula OX=3880 GN=11425406 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.0e-08 Identity = 52/127 (40.94%), Postives = 69/127 (54.33%), Query Frame = 0
BLAST of Tan0000262.1 vs. ExPASy TrEMBL
Match: A0A6A5NCA6 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00011789 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.7e-08 Identity = 65/197 (32.99%), Postives = 97/197 (49.24%), Query Frame = 0
BLAST of Tan0000262.1 vs. ExPASy TrEMBL
Match: A0A6A4QD80 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr06g0165981 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 2.3e-08 Identity = 63/180 (35.00%), Postives = 92/180 (51.11%), Query Frame = 0
BLAST of Tan0000262.1 vs. TAIR 10
Match: AT1G25370.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 51.2 bits (121), Expect = 9.3e-07 Identity = 39/113 (34.51%), Postives = 57/113 (50.44%), Query Frame = 0
BLAST of Tan0000262.1 vs. TAIR 10
Match: AT1G48770.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06 Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 0
BLAST of Tan0000262.1 vs. TAIR 10
Match: AT3G18295.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 50.4 bits (119), Expect = 1.6e-06 Identity = 45/121 (37.19%), Postives = 63/121 (52.07%), Query Frame = 0
BLAST of Tan0000262.1 vs. TAIR 10
Match: AT3G60410.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 47.4 bits (111), Expect = 1.4e-05 Identity = 32/93 (34.41%), Postives = 48/93 (51.61%), Query Frame = 0
BLAST of Tan0000262.1 vs. TAIR 10
Match: AT3G60410.2 (Protein of unknown function (DUF1639) ) HSP 1 Score: 47.4 bits (111), Expect = 1.4e-05 Identity = 32/93 (34.41%), Postives = 48/93 (51.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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