Spg039274.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg039274.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Heavy metal transport/detoxification superfamily protein
Location	scaffold10: 45690340 .. 45690752 (+)
Sequence length	234
RNA-Seq Expression	Spg039274.1
Synteny	Spg039274.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAACGTAAGTACTTTTTCTGGGAGAAATTCCTGGAATTTGATATCATGGTGTTAATGGGTCTTTGTTTTTTTGGCCATAGGTGGTGGAATTGAAGGTGTTTATGCATTGCGAGGAGTGCATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGGTTTGTGTTCAATGTCTTGATCAAATTCTCCTCTGGTTTAAGTTTAATAATGCTCGAAGCATTCAATCTTTTTTGGGGTTTCTTTTTCTTTCTCCATTTGCAGATATAGAGACGTATAATGTCGATACGCAGCTGAACAAGGTGACTGTTACAGGCAATGTCACTACAGAAGAAGTCATCAAAGTTCTTCAGAAAATTAGCAAAACTGCAATTCCATGGAAAGCTGATGAAGTCAACAACATGAATTACTAG

mRNA sequence

ATGGCTAACGTGGTGGAATTGAAGGTGTTTATGCATTGCGAGGAGTGCATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGATATAGAGACGTATAATGTCGATACGCAGCTGAACAAGGTGACTGTTACAGGCAATGTCACTACAGAAGAAGTCATCAAAGTTCTTCAGAAAATTAGCAAAACTGCAATTCCATGGAAAGCTGATGAAGTCAACAACATGAATTACTAG

Coding sequence (CDS)

ATGGCTAACGTGGTGGAATTGAAGGTGTTTATGCATTGCGAGGAGTGCATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGATATAGAGACGTATAATGTCGATACGCAGCTGAACAAGGTGACTGTTACAGGCAATGTCACTACAGAAGAAGTCATCAAAGTTCTTCAGAAAATTAGCAAAACTGCAATTCCATGGAAAGCTGATGAAGTCAACAACATGAATTACTAG

Protein sequence

MANVVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKISKTAIPWKADEVNNMNY

Homology

[Close]

BLAST of Spg039274.1 vs. NCBI nr
Match: XP_022133451.1 (copper transport protein ATX1 [Momordica charantia])

HSP 1 Score: 135.2 bits (339), Expect = 2.4e-28
Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 1   MANVVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKI 60
           MANVVELKV +HCE+CIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVL KI
Sbjct: 41  MANVVELKVGLHCEDCIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLHKI 100

Query: 61  SKTAIPWKADEVNN 75
           SKTAIPW+ADEVNN
Sbjct: 101 SKTAIPWQADEVNN 114

[Close]

BLAST of Spg039274.1 vs. NCBI nr
Match: XP_004138408.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 9.1e-28
Identity = 66/77 (85.71%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 1  MANVVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKI 60
          MANVVELKVF+HCEECIKKILKAIKKIQDIETYNVD ++NKV VTGNVT EEVIKVLQKI
Sbjct: 1  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60

Query: 61 SKTAIPWKADEVNNMNY 78
           KTAIPW+ DE+NN+NY
Sbjct: 61 RKTAIPWQDDELNNINY 77

[Close]

BLAST of Spg039274.1 vs. NCBI nr
Match: XP_038884077.1 (copper transport protein ATX1 [Benincasa hispida])

HSP 1 Score: 127.9 bits (320), Expect = 3.8e-26
Identity = 64/76 (84.21%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MANVVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKI 60
          MANVVELKVF+HCEECIKKILKAIKKIQDIETYNVD ++NKV VTGNVT EEVIKVLQKI
Sbjct: 1  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTKEEVIKVLQKI 60

Query: 61 SKTAIPWKADEVNNMN 77
           KTAIPW+AD +NN++
Sbjct: 61 RKTAIPWQADGLNNID 76

[Close]

BLAST of Spg039274.1 vs. NCBI nr
Match: KAE8646572.1 (hypothetical protein Csa_004951, partial [Cucumis sativus])

HSP 1 Score: 127.1 bits (318), Expect = 6.6e-26
Identity = 63/74 (85.14%), Postives = 69/74 (93.24%), Query Frame = 0


Query: 4  VVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKISKT 63
          VVELKVF+HCEECIKKILKAIKKIQDIETYNVD ++NKV VTGNVT EEVIKVLQKI KT
Sbjct: 1  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60

Query: 64 AIPWKADEVNNMNY 78
          AIPW+ DE+NN+NY
Sbjct: 61 AIPWQDDELNNINY 74

[Close]

BLAST of Spg039274.1 vs. NCBI nr
Match: XP_008456748.1 (PREDICTED: superoxide dismutase 1 copper chaperone [Cucumis melo])

HSP 1 Score: 126.7 bits (317), Expect = 8.6e-26
Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 1  MANVVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKI 60
          MANVVELKVF+HC+ECIKKILKAIKKIQDIETYNVD ++NKV VTGNVT EEVIKVLQKI
Sbjct: 1  MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60

Query: 61 SKTAIPWKADEVNNM 76
           KTA+PW+ DE+NN+
Sbjct: 61 RKTAVPWQDDELNNI 75

[Close]

BLAST of Spg039274.1 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-07
Identity = 28/65 (43.08%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 3  NVVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKISK 62
          ++VEL V M C+ C KK+ +AI K+  ++T  +D    KVTVTG V  EEV+K++++  +
Sbjct: 16 SIVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGR 75

Query: 63 TAIPW 68
          TA  W
Sbjct: 76 TAEYW 80

[Close]

BLAST of Spg039274.1 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-07
Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 7   LKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKISKTAIP 66
           L+V +HCE C +KI K + KI  + T N+D +  KVTV GNV  E +IK + K  + A  
Sbjct: 34  LRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAEL 93

Query: 67  WKADEVNNMN 77
           W     NN+N
Sbjct: 94  WPTSMENNIN 103

[Close]

BLAST of Spg039274.1 vs. ExPASy Swiss-Prot
Match: F4JZL7 (Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX=3702 GN=HIPP33 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.1e-06
Identity = 31/73 (42.47%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 7  LKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKISKTAIP 66
          LKV +HC+ C +K+ K ++KI+ + T  +D +L KVTV+GNV    +IK L K  K A  
Sbjct: 14 LKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGKHAEI 73

Query: 67 W---KADEVNNMN 77
          W   K    NN N
Sbjct: 74 WGAPKGGSNNNQN 86

[Close]

BLAST of Spg039274.1 vs. ExPASy Swiss-Prot
Match: Q9M8K5 (Heavy metal-associated isoprenylated plant protein 32 OS=Arabidopsis thaliana OX=3702 GN=HIPP32 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 4.6e-06
Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 7  LKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKISKTAIP 66
          LKV +HC+ C +K+ K ++KI+ + T  +D++  KVTV+G+V    +IK L K  K A  
Sbjct: 14 LKVNIHCDGCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAKSGKHAEI 73

Query: 67 WKADEVNN 75
          W A + NN
Sbjct: 74 WGAPKGNN 81

[Close]

BLAST of Spg039274.1 vs. ExPASy Swiss-Prot
Match: Q94BT9 (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 1.3e-05
Identity = 24/70 (34.29%), Postives = 43/70 (61.43%), Query Frame = 0


Query: 1  MANVVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKI 60
          M+  V L+V M CE C+  + + + K++ +E+++VD +  KVTV GNV  + V++ + K 
Sbjct: 1  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 60

Query: 61 SKTAIPWKAD 71
           K    W+A+
Sbjct: 61 GKKTAFWEAE 70

[Close]

BLAST of Spg039274.1 vs. ExPASy TrEMBL
Match: A0A6J1BV52 (copper transport protein ATX1 OS=Momordica charantia OX=3673 GN=LOC111006024 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-28
Identity = 69/74 (93.24%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 1   MANVVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKI 60
           MANVVELKV +HCE+CIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVL KI
Sbjct: 41  MANVVELKVGLHCEDCIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLHKI 100

Query: 61  SKTAIPWKADEVNN 75
           SKTAIPW+ADEVNN
Sbjct: 101 SKTAIPWQADEVNN 114

[Close]

BLAST of Spg039274.1 vs. ExPASy TrEMBL
Match: A0A0A0K8N1 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G013360 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.4e-28
Identity = 66/77 (85.71%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 1  MANVVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKI 60
          MANVVELKVF+HCEECIKKILKAIKKIQDIETYNVD ++NKV VTGNVT EEVIKVLQKI
Sbjct: 1  MANVVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60

Query: 61 SKTAIPWKADEVNNMNY 78
           KTAIPW+ DE+NN+NY
Sbjct: 61 RKTAIPWQDDELNNINY 77

[Close]

BLAST of Spg039274.1 vs. ExPASy TrEMBL
Match: A0A1S3C423 (superoxide dismutase 1 copper chaperone OS=Cucumis melo OX=3656 GN=LOC103496596 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.1e-26
Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 0


Query: 1  MANVVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKI 60
          MANVVELKVF+HC+ECIKKILKAIKKIQDIETYNVD ++NKV VTGNVT EEVIKVLQKI
Sbjct: 1  MANVVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKI 60

Query: 61 SKTAIPWKADEVNNM 76
           KTA+PW+ DE+NN+
Sbjct: 61 RKTAVPWQDDELNNI 75

[Close]

BLAST of Spg039274.1 vs. ExPASy TrEMBL
Match: A0A2P2IHW8 (HMA domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.0e-24
Identity = 62/73 (84.93%), Postives = 68/73 (93.15%), Query Frame = 0


Query: 1  MANVVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKI 60
          MANVVELKV +HCEECIKKILKAIKKIQDIETY+VDTQL+KVTVTGNVTTEEVI+V+QKI
Sbjct: 1  MANVVELKVGLHCEECIKKILKAIKKIQDIETYDVDTQLSKVTVTGNVTTEEVIRVIQKI 60

Query: 61 SKTAIPWKADEVN 74
           KTA  W ADE+N
Sbjct: 61 GKTATTWGADEIN 73

[Close]

BLAST of Spg039274.1 vs. ExPASy TrEMBL
Match: A0A5D3C2A2 (Superoxide dismutase 1 copper chaperone OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001360 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.0e-24
Identity = 59/72 (81.94%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 4  VVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKISKT 63
          VVELKVF+HC+ECIKKILKAIKKIQDIETYNVD ++NKV VTGNVT EEVIKVLQKI KT
Sbjct: 3  VVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 62

Query: 64 AIPWKADEVNNM 76
          A+PW+ DE+NN+
Sbjct: 63 AVPWQDDELNNI 74

[Close]

BLAST of Spg039274.1 vs. TAIR 10
Match: AT5G05365.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 107.8 bits (268), Expect = 3.8e-24
Identity = 53/70 (75.71%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 1  MANVVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKI 60
          MANVVELKV +HC+ECI+KILKAIKKI+DIE Y+VDTQLNKVTVTGNVT E+VI+VLQK+
Sbjct: 1  MANVVELKVNLHCDECIRKILKAIKKIEDIEAYDVDTQLNKVTVTGNVTEEQVIRVLQKV 60

Query: 61 SKTAIPWKAD 71
           K A+ W  D
Sbjct: 61 RKAAVKWDQD 70

[Close]

BLAST of Spg039274.1 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.0e-08
Identity = 28/65 (43.08%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 3  NVVELKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKISK 62
          ++VEL V M C+ C KK+ +AI K+  ++T  +D    KVTVTG V  EEV+K++++  +
Sbjct: 16 SIVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGR 75

Query: 63 TAIPW 68
          TA  W
Sbjct: 76 TAEYW 80

[Close]

BLAST of Spg039274.1 vs. TAIR 10
Match: AT5G27690.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-08
Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 7   LKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKISKTAIP 66
           L+V +HCE C +KI K + KI  + T N+D +  KVTV GNV  E +IK + K  + A  
Sbjct: 34  LRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAEL 93

Query: 67  WKADEVNNMN 77
           W     NN+N
Sbjct: 94  WPTSMENNIN 103

[Close]

BLAST of Spg039274.1 vs. TAIR 10
Match: AT5G19090.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 1.5e-07
Identity = 31/73 (42.47%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 7  LKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKISKTAIP 66
          LKV +HC+ C +K+ K ++KI+ + T  +D +L KVTV+GNV    +IK L K  K A  
Sbjct: 14 LKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGKHAEI 73

Query: 67 W---KADEVNNMN 77
          W   K    NN N
Sbjct: 74 WGAPKGGSNNNQN 86

[Close]

BLAST of Spg039274.1 vs. TAIR 10
Match: AT5G19090.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 1.5e-07
Identity = 31/73 (42.47%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 7  LKVFMHCEECIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLQKISKTAIP 66
          LKV +HC+ C +K+ K ++KI+ + T  +D +L KVTV+GNV    +IK L K  K A  
Sbjct: 14 LKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGKHAEI 73

Query: 67 W---KADEVNNMN 77
          W   K    NN N
Sbjct: 74 WGAPKGGSNNNQN 86

The following BLAST results are available for this feature:

BLAST of Spg039274.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133451.1	2.4e-28	93.24	copper transport protein ATX1 [Momordica charantia]	[more]
XP_004138408.1	9.1e-28	85.71	protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucumis sativus]	[more]
XP_038884077.1	3.8e-26	84.21	copper transport protein ATX1 [Benincasa hispida]	[more]
KAE8646572.1	6.6e-26	85.14	hypothetical protein Csa_004951, partial [Cucumis sativus]	[more]
XP_008456748.1	8.6e-26	82.67	PREDICTED: superoxide dismutase 1 copper chaperone [Cucumis melo]	[more]

BLAST of Spg039274.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3H6D0	1.4e-07	43.08	Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX...	[more]
Q84J88	1.9e-07	42.86	Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX...	[more]
F4JZL7	2.1e-06	42.47	Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX...	[more]
Q9M8K5	4.6e-06	41.18	Heavy metal-associated isoprenylated plant protein 32 OS=Arabidopsis thaliana OX...	[more]
Q94BT9	1.3e-05	34.29	Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2	[more]

BLAST of Spg039274.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BV52	1.2e-28	93.24	copper transport protein ATX1 OS=Momordica charantia OX=3673 GN=LOC111006024 PE=...	[more]
A0A0A0K8N1	4.4e-28	85.71	HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G013360 PE=4 SV...	[more]
A0A1S3C423	4.1e-26	82.67	superoxide dismutase 1 copper chaperone OS=Cucumis melo OX=3656 GN=LOC103496596 ...	[more]
A0A2P2IHW8	1.0e-24	84.93	HMA domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
A0A5D3C2A2	3.0e-24	81.94	Superoxide dismutase 1 copper chaperone OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Spg039274.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05365.1	3.8e-24	75.71	Heavy metal transport/detoxification superfamily protein	[more]
AT3G56891.1	1.0e-08	43.08	Heavy metal transport/detoxification superfamily protein	[more]
AT5G27690.1	1.3e-08	42.86	Heavy metal transport/detoxification superfamily protein	[more]
AT5G19090.1	1.5e-07	42.47	Heavy metal transport/detoxification superfamily protein	[more]
AT5G19090.2	1.5e-07	42.47	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 8..62 e-value: 9.3E-13 score: 48.4
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 11..66 score: 9.64562
None	No IPR available	GENE3D	3.30.70.100		coord: 2..65 e-value: 1.0E-15 score: 59.7
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 2..72
None	No IPR available	PANTHER	PTHR22814:SF304	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 2..72
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 4..67

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg039274	Spg039274	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg039274.1-cds	Spg039274.1-cds-scaffold10:45690340..45690348	CDS
Spg039274.1-cds	Spg039274.1-cds-scaffold10:45690425..45690500	CDS
Spg039274.1-cds	Spg039274.1-cds-scaffold10:45690604..45690752	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg039274.1	Spg039274.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding