Spg034612.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg034612.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold4: 16234499 .. 16239561 (-)
Sequence length	465
RNA-Seq Expression	Spg034612.1
Synteny	Spg034612.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAGGGGTCGAGTCACGGAGCAAGATCGCGAGTCGAGATGTTCGCGGGTTGCGTGGTCGCAATTTGGTCACAGGCGGCAAAAACAGAGGTCTCGTGACTGCGGGTCTTCTCGCAATCAGGTAACGACGGCGACGGTTGAGTAGGAGTCAGACGACGACACTTGGGTAAGAGTCAGACGACGGCACTTGGGTAAGAGTCAGACGACGACGACTTAGACGGCGGCAGCAGCGGCAACTATGATGGCTAGGGTTAGGTTAGATATTTTAGGGTTTTACCTTTTGGCTCTCATACAATGTGCAAAAGGTATTTCTTTATTCAATAATCTAATAATTTCTAGCTAGGAACAAAAGGCCTCACTTAAGGATTGAAACACCTAATTACAATAAAGGAAAAGATACATAAATAAATACAATATAATTATAGCAAATAACTCTAATTGAGGAGAAAATATAAAATACAGAAACTAACATTCTTTTGTCAGGTTGAGGGTGTTTATTTCGTTGTTTATCCAAAACTATTTGGTTGTGATACTTGAAAGTCAATAGCTATTGTTGGGCTATTGAGGGTTGTTTGTAGAATGATATCGAGGGCTTCTTGTAATCTCCCCATTATAGTAGAACCTTTAGTTGTAGAAGACTGGATGTAGTCCCCGAGCTTGGGGCGAACTAGTATAACTTTCCGTGTCATCTTTTTTGCTATCTCTTTTATTTTGTTCATGACTATTATTATTGACTTGTTTGGCTTAACTTGTGGAAGGGGGGATAACTATAAGGTGCTTCCTCCTCTTCCCTCCGCTTTGCGTAGCAAATTTGCATCTCTTATTGAAGCTTGTGATCTTGAGTTTCGTGAAATCCTTCCTATGATATCAAAAGATTCAGTGTAAAGGTTGTCTTAGGCTCTTCTTTAAAAGGTTGTGAAGCTCTGATTTTTCAAGTTTATTTGTCCTTTTTCTAGTTCTTTCAAGTTTCTAAGGTTATGGTTTTTGTTGTTTGCTCTGCTCTTTCAGTTGGTTGTTGTGCTTTTCTTTTGGTTAGATAAGTTTGCAGCATCTAGGATTTTTTTTTATTATTTTTTTTTATTTATTTTTTTTAAAAAAATTTCTGCTTTTAGCACAGAATCATTTGAGCATTTCTCATAGCTCTTTCTGAAGTTGGTTCCTTTTTTGGTTAGAGCTCCTTGCAGCTTATCTTCAGCTTGTTTCTTGGTTTTTTTTTTGGTTTTTTTGGGTCTTTCGTTTCAGAGTCTCCTTGGTGCATTGGTGTTTCTGTTTTCAGTCTTTTGTGAGGTCTCCAGTGGGCAGTTTTTTGTGTTTGAGTTTGACTTCTTTGGTTCTCTCTTTGCAAGTTCTTTCTTTGTTCTGCTTGTTCCAAGCTGGTTTGCTTTCTAGATTCTCTTTGTTGGTTTGCTTAAGTTCTTTTTATTCCGTTTGGTTCTTTTTTCACTCCCTTGCAGAGTCTGTATCCCTTGAGTATCCGTCTCTTTTCGTTCTTTTAATGAAAAGTTTCGTTTCTTGTTCAAGGAAAAAAAAAATCCTAGTTGATGGTTTTATACTATCAGGTTACTTTCATTCTCACAGCTGAGGTTAAGTTGAAAATGATCCAGTTGAATTGCTCTCAGCGATTTCTTTATGTTTCTTCTTTTTGATGTAAGTCTTCAAGGTGTTTGTCTTTATTAGGTGAAAGTTAAGGGACTCAAGTCTCAAATACAAGCTATTTATAGGCTGCCATAGGTGTCATGCATGGTAATTAACCCATAACCAACCCAAACCAGCCCAACTAACCAACTAAAATAGGTCAGTAACTAACTTCTCCAATTGGTTGGGACAAAAGAAAATACAAATAACTAGGTTTTAAACGGTCAGTAGGTCAAGAATAAGAAAAGACTAATAAGTCCCTACATCACTTTTCTTTTTGGAGCATTTGGAAAACGCCAGCATATGTTTACATTTGAAAATAAAATGGAAATTTTATTTTATTTACAGAGTGAGTTATGTTTTATCTTTTCAAGCTTATAATATTAAGAGCCTTTAATCACTCTTCAATGAAATGTTTGTTTCTTGTTTGAAATCATCTCTCTTTTCTATCTTTCGGTTTGCTGACTAGGTTTTTCCCCCCTGAAATCTTCCTTGCTTGGGCTTAGGCTGATTTTATTACCCTTCCCCTTGTGTTAGTGTCTGAATCAGAGTCGTTAGTTTCAAGTGTTGATTTCTTAAAAAGTAATTTATTAGATGCTACAGCAAACTGATAGTTGTTATGCGCTTATTGAAATATCTTATCTTCTCTCACATAGCTTATGAGATTAAGTCTTTTGTGTTAGGCTGCTGAGGGCTTTTGTCGCAGATACTCCATCTCACATGAATCGTTGTACAGGAAGATTGATGGTAAGTCTCCAGAGACGAGTATTAAAAGCACAAGTTTTCATTTGAAATTTATTTTTCTTCAAAAACTAAAAATTCCTTAGCTCTTAAAGGAAAAAAAAAAATACAAAAATATCCTTTGTAGTTAGACGGCTGCTTTATTAAATCCCCCATTTTTGAAAATCTCGTGTTTTGTCCGACCTCAACATGTATCAGATCAAAAAGTTGATCTATCTCTTTCAATTTTCATAAGCAAACGAAATTTCATTGTTTCCAAAGATCAGAGTTTGAGAATAAAATGTCGTCCATGTAAAGTGAATTAAACTTCAACGTTATAAAACATATAAATAGTCTCTATTACACTCCTACAAACATATTTTATCCATTGACAATCAGAATAGTGGTATTACAGTGGTCTTCTTTGTGACTTTTTTTTGTGCTGCTCTCTCTCTCGCTTGGTGGAGTATGGATTCTTCCTTTTGGTCTCCTTGTTTCAGTAGTTGTGGTGTTTGGTTTCGTTTTAGGGTTCCATGGTTTGATGAAGATTTTGACATTAATCATGGCTTTTTCAAAGGGTTTAAGTAGTTAACTTGATTGCTGTGGTTAGAGGTTTTGAAGCAGGAAAATAAACACTGATTTTAGCATTATAAAGGGTGCTGTCTCCTTTGGACTATCCCTTGCTTCAAGTTCTTGAACTGTTTCCTGGCTGTGGTGTTTCTATTTTGGTGAATAAGGTCTCTCTGGTTTTGGTGGTAGAGGCGTTCAAAGTCAGCAAGTTTTTTATGGTTTTCCTTTTGAAGTTTCTTAAATTTAGGAGAATAATTTTGTTTCTTATTCCAATATGTGCAACCTGTCTTCTTATATAGGAGAAAGACCCATTACAATATAAGGAAACAATAAAAACAATAATGACAATATTGACAAATAATATATACAATTGTAAATATTAGAAATTCCAACACTCCCCCTCAGGCTGGTTTAAAGATGTCGTCCATAGCCAGCTTGTCAATAAGTTTATCGAATTGCTTCTTTAGAAGTCCCTTGGTCAGTATATCAGCAAGTTGCTCTGTCGTCGGAAGATAAGGGATACATTTTGCACCAGTATCAATCTTTTCTTTAATAAAATGTTTGTCAACCTCAATATGTTTTGTTCTATCATGTAGAATTTGATTGTGAGCTATAGATATGACAACTTTATTGTCACAATAAATTCGAATAGGCTTAACCTGAGGAAACTTAAATTCTTCAAGTATTCTTTTGATCCATATGCCTTCACAAATTCCATGGGTTAAGGCTTTAAACTCTGCTTCAGCCTGTCCACTACATTTTGCTTTTTGCTTCGCCATGTAACTAGATTTCCTCCAACAAAGGAACAATAGCCCGAGGTAGATCTTCTATCAGTAGTACTTCCAGCTCAGTCTGCATCTGTATAAACTTCTACTTGGAAGTGATTATTTTTTTTGAATAAAATACCTTTACTAGGAGCTCTTTTTAAATATCTTAGATTCCTAAAATCCTATAGGCAGCTTCGAAATGAGTTGGTCCAGGTGCATGCATAAACTGACTTACCATGCTTACAACAAAAGTAATATCCGGATGTGTATGAGACAAATAAATTAGTCTCCCCACAAGTCTTTGGTATCTCTCCTTATCTTTTATTTCTTCTTCTTTTGCAAATAAATTAGTCTCCCCACAAGTCTTTGGTATCTCTCCTTATCTTTTATTTCTTCTTCTTTTGCTGCTTCTAATTTCAAATTGGGCTCAATAGGAGTTTCAGCAACTCTGCGTCCAAGTAATCCTGTTTCTTTAAGTATGTCAAAGACATATTTTCTTTGATTTATAAAGATACCCTTCCTTGATCTTGCAAATTTCATCCCAAGAAAATATTTTAACTGTTGGAATATTTGTGTGTAAATCTTTATTGTAAAATATTTGGTCTTTATTGCTTTTATTCCCTTCCATATTTGTAATAGGTCTTTCTCCTATATAAGAGGACCTACATTGCACATATTAGATATATGAGAATAATTTTAAACTCTCAAAATCAAGATGGTATCAGAGCAGGTTTAAATCCTAGCCGTCTCAAAAACCCTAAAAACCCTACCTTTGAAACCCCAGCCGCCGTCGCCGGAACCCTAGCCGCCATTCTTAATTGGTGCACCTTACTTCCAGCGTCGGGTGGTCCTTTTTTACCGCCACTGCTGTACTGGTGCTTCTTACGCCGTCGCGCCGCCTCCACACATCAGACAACACCGTTGATTATCTCAGCCCAGTCGTGCGATAAGTAGCATCTCAGACCCAGTCGATTATCTCACATCAGTCGTGCAAAAAAAAAACCCGGTTGCTTCGTTCGTGACCTAGAGACCCGCAACAACAGAGCACGACCCCGCACCTGCATTCGAACGCTCGCACCTCCAAGTCGTCATCGACCACTAGCTCGCCCCGTCCATGATTTGCAAGTCGTCGTCGACCCGTCACTTGCCTCATCTGCAAGTCTTGGTATCAAATTTGTTTTTTGGTGGGTTTGCAAGTCTTTGTCTTCGCAGGGTTGAATTTTTTGATTCGGGGGGTTGATTCTGAACAACTACAGTACACACGGGCAGAGCTGGATTTTGAAAATCCAGACGGTACACACAGAGAGGAGAAGACGCAACCTCCAGTCACGATTCGGTTGGGTCTCAGCAGAGTGTTCAGTGACTGTTAA

mRNA sequence

ATGCGAGGGGTCGAGTCACGGAGCAAGATCGCGAGTCGAGATGTTCGCGGGTTGCGTGGTCGCAATTTGGTCACAGGCGGCAAAAACAGAGGTCTCGTGACTGCGGGTCTTCTCGCAATCAGGGGGGATAACTATAAGGTGCTTCCTCCTCTTCCCTCCGCTTTGCGTAGCAAATTTGCATCTCTTATTGAAGCTTGTGATCTTGAGTTTCGTGAAATCCTTCCTATGATATCAAAAGATTCAGCTGCTGAGGGCTTTTGTCGCAGATACTCCATCTCACATGAATCGTTGTACAGGAAGATTGATGGGTTGAATTTTTTGATTCGGGGGGTTGATTCTGAACAACTACAGTACACACGGGCAGAGCTGGATTTTGAAAATCCAGACGGTACACACAGAGAGGAGAAGACGCAACCTCCAGTCACGATTCGGTTGGGTCTCAGCAGAGTGTTCAGTGACTGTTAA

Coding sequence (CDS)

ATGCGAGGGGTCGAGTCACGGAGCAAGATCGCGAGTCGAGATGTTCGCGGGTTGCGTGGTCGCAATTTGGTCACAGGCGGCAAAAACAGAGGTCTCGTGACTGCGGGTCTTCTCGCAATCAGGGGGGATAACTATAAGGTGCTTCCTCCTCTTCCCTCCGCTTTGCGTAGCAAATTTGCATCTCTTATTGAAGCTTGTGATCTTGAGTTTCGTGAAATCCTTCCTATGATATCAAAAGATTCAGCTGCTGAGGGCTTTTGTCGCAGATACTCCATCTCACATGAATCGTTGTACAGGAAGATTGATGGGTTGAATTTTTTGATTCGGGGGGTTGATTCTGAACAACTACAGTACACACGGGCAGAGCTGGATTTTGAAAATCCAGACGGTACACACAGAGAGGAGAAGACGCAACCTCCAGTCACGATTCGGTTGGGTCTCAGCAGAGTGTTCAGTGACTGTTAA

Protein sequence

MRGVESRSKIASRDVRGLRGRNLVTGGKNRGLVTAGLLAIRGDNYKVLPPLPSALRSKFASLIEACDLEFREILPMISKDSAAEGFCRRYSISHESLYRKIDGLNFLIRGVDSEQLQYTRAELDFENPDGTHREEKTQPPVTIRLGLSRVFSDC

Homology

The following BLAST results are available for this feature:

BLAST of Spg034612.1 vs.


Match Name	E-value	Identity	Description

BLAST of Spg034612.1 vs.


Match Name	E-value	Identity	Description

BLAST of Spg034612.1 vs.


Match Name	E-value	Identity	Description

BLAST of Spg034612.1 vs.


Match Name	E-value	Identity	Description

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg034612	Spg034612	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg034612.1-cds	Spg034612.1-cds-scaffold4:16234499..16234656	CDS
Spg034612.1-cds	Spg034612.1-cds-scaffold4:16237179..16237242	CDS
Spg034612.1-cds	Spg034612.1-cds-scaffold4:16238682..16238802	CDS
Spg034612.1-cds	Spg034612.1-cds-scaffold4:16239440..16239561	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg034612.1	Spg034612.1-protein	polypeptide