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Spg033941.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGACACACACAATAATTATAGGTCATAATCGTGGCCACTTTTCTTTGGTTTTTGAACTTTTTGATTGATAGTATTTGCTCGAATTCCCCTCTTCTCAAACTACTTAAATCCCCTCCTCTTCTTGACCCTTCTCCCCCACTCTCACGCCCCACACTTGGGAGTTCGCACCGCTCGTTTTCAACTCTCATTTCTCTTTCAGGCATTTTCACAAACACCTTTCGCTCACATTAAAAAAAAAAAAAACCCACCAATTCTCCAATGGCCAGACCTCAACAGCGTTATCGAGGCGTCCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAAATTCGTCACCCTTTATTGTAAGTCCCAACAGTTTTCAGTTTTGCACCTCGTTTTCAATACCCATTTTGGCTCTAAAATTTCTCCTCTGTTCGTTCTCAGGAAAACCAGAATTTGGCTGGGCACTTTCGAAACGGCGGAGGATGCTGCAAGAGCCTACGACGAAGCCGCTCGGTTAATGTGTGGCCCTAGAGCACGAACCAATTTCCCTTTCAACGCCAACGACTCCAATTCCTCTTCTTCTAAACTTCTCTCTGCCAATTTGACCGCCAAGCTCCACCGTTGCTACATGGCGTCTCTCCATTTGACCAACCCATCGCCGCAGAAACCCGCCGCGCCCGGGAATAAGCCCCTGACGGCGGAGAAGAAAAGGGCGGCGGCGGCGGCGACGACGGAGGCCCAAACGCAGACTGCCCATCAGCCGTTTGAGGCTCTGGAAGAGGATCACATCCAACAGATGATTGAGGAATTGATTCATTATGGGTCTGTTGAGCTCTGTTCTGTGGTGCCGCCGTCTCAGGCCTTTTGATATTTATTT ATGGCCAGACCTCAACAGCGTTATCGAGGCGTCCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAAATTCGTCACCCTTTATTGAAAACCAGAATTTGGCTGGGCACTTTCGAAACGGCGGAGGATGCTGCAAGAGCCTACGACGAAGCCGCTCGGTTAATGTGTGGCCCTAGAGCACGAACCAATTTCCCTTTCAACGCCAACGACTCCAATTCCTCTTCTTCTAAACTTCTCTCTGCCAATTTGACCGCCAAGCTCCACCGTTGCTACATGGCGTCTCTCCATTTGACCAACCCATCGCCGCAGAAACCCGCCGCGCCCGGGAATAAGCCCCTGACGGCGGAGAAGAAAAGGGCGGCGGCGGCGGCGACGACGGAGGCCCAAACGCAGACTGCCCATCAGCCGTTTGAGGCTCTGGAAGAGGATCACATCCAACAGATGATTGAGGAATTGATTCATTATGGGTCTGTTGAGCTCTGTTCTGTGGTGCCGCCGTCTCAGGCCTTTTGA ATGGCCAGACCTCAACAGCGTTATCGAGGCGTCCGTCAAAGGCATTGGGGCTCTTGGGTCTCTGAAATTCGTCACCCTTTATTGAAAACCAGAATTTGGCTGGGCACTTTCGAAACGGCGGAGGATGCTGCAAGAGCCTACGACGAAGCCGCTCGGTTAATGTGTGGCCCTAGAGCACGAACCAATTTCCCTTTCAACGCCAACGACTCCAATTCCTCTTCTTCTAAACTTCTCTCTGCCAATTTGACCGCCAAGCTCCACCGTTGCTACATGGCGTCTCTCCATTTGACCAACCCATCGCCGCAGAAACCCGCCGCGCCCGGGAATAAGCCCCTGACGGCGGAGAAGAAAAGGGCGGCGGCGGCGGCGACGACGGAGGCCCAAACGCAGACTGCCCATCAGCCGTTTGAGGCTCTGGAAGAGGATCACATCCAACAGATGATTGAGGAATTGATTCATTATGGGTCTGTTGAGCTCTGTTCTGTGGTGCCGCCGTCTCAGGCCTTTTGA MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPFNANDSNSSSSKLLSANLTAKLHRCYMASLHLTNPSPQKPAAPGNKPLTAEKKRAAAAATTEAQTQTAHQPFEALEEDHIQQMIEELIHYGSVELCSVVPPSQAF Homology
BLAST of Spg033941.1 vs. NCBI nr
Match: XP_022996843.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima]) HSP 1 Score: 287.3 bits (734), Expect = 8.3e-74 Identity = 149/167 (89.22%), Postives = 153/167 (91.62%), Query Frame = 0
BLAST of Spg033941.1 vs. NCBI nr
Match: XP_023546750.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 277.3 bits (708), Expect = 8.6e-71 Identity = 143/165 (86.67%), Postives = 146/165 (88.48%), Query Frame = 0
BLAST of Spg033941.1 vs. NCBI nr
Match: XP_022962279.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata]) HSP 1 Score: 276.2 bits (705), Expect = 1.9e-70 Identity = 143/165 (86.67%), Postives = 145/165 (87.88%), Query Frame = 0
BLAST of Spg033941.1 vs. NCBI nr
Match: KAG7029485.1 (Ethylene-responsive transcription factor [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 275.0 bits (702), Expect = 4.3e-70 Identity = 142/165 (86.06%), Postives = 145/165 (87.88%), Query Frame = 0
BLAST of Spg033941.1 vs. NCBI nr
Match: XP_038886181.1 (ethylene-responsive transcription factor ERF003-like [Benincasa hispida]) HSP 1 Score: 272.3 bits (695), Expect = 2.8e-69 Identity = 142/173 (82.08%), Postives = 146/173 (84.39%), Query Frame = 0
BLAST of Spg033941.1 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 4.0e-55 Identity = 115/177 (64.97%), Postives = 132/177 (74.58%), Query Frame = 0
BLAST of Spg033941.1 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 9.3e-44 Identity = 105/164 (64.02%), Postives = 114/164 (69.51%), Query Frame = 0
BLAST of Spg033941.1 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.2e-24 Identity = 81/193 (41.97%), Postives = 103/193 (53.37%), Query Frame = 0
BLAST of Spg033941.1 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.7e-21 Identity = 57/93 (61.29%), Postives = 65/93 (69.89%), Query Frame = 0
BLAST of Spg033941.1 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.7e-21 Identity = 79/174 (45.40%), Postives = 97/174 (55.75%), Query Frame = 0
BLAST of Spg033941.1 vs. ExPASy TrEMBL
Match: A0A6J1KC60 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111491967 PE=4 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 4.0e-74 Identity = 149/167 (89.22%), Postives = 153/167 (91.62%), Query Frame = 0
BLAST of Spg033941.1 vs. ExPASy TrEMBL
Match: A0A6J1HGM1 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111462773 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 9.3e-71 Identity = 143/165 (86.67%), Postives = 145/165 (87.88%), Query Frame = 0
BLAST of Spg033941.1 vs. ExPASy TrEMBL
Match: A0A6J1KP69 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111496339 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 2.5e-68 Identity = 142/175 (81.14%), Postives = 152/175 (86.86%), Query Frame = 0
BLAST of Spg033941.1 vs. ExPASy TrEMBL
Match: A0A1S3BBS3 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103488339 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 1.1e-66 Identity = 137/173 (79.19%), Postives = 142/173 (82.08%), Query Frame = 0
BLAST of Spg033941.1 vs. ExPASy TrEMBL
Match: A0A0A0LQD0 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382550 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.4e-66 Identity = 137/173 (79.19%), Postives = 142/173 (82.08%), Query Frame = 0
BLAST of Spg033941.1 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 215.7 bits (548), Expect = 2.9e-56 Identity = 115/177 (64.97%), Postives = 132/177 (74.58%), Query Frame = 0
BLAST of Spg033941.1 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 113.6 bits (283), Expect = 1.5e-25 Identity = 81/193 (41.97%), Postives = 103/193 (53.37%), Query Frame = 0
BLAST of Spg033941.1 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22 Identity = 57/93 (61.29%), Postives = 65/93 (69.89%), Query Frame = 0
BLAST of Spg033941.1 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22 Identity = 79/174 (45.40%), Postives = 97/174 (55.75%), Query Frame = 0
BLAST of Spg033941.1 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 95.1 bits (235), Expect = 5.6e-20 Identity = 77/174 (44.25%), Postives = 95/174 (54.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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