Spg030541.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg030541.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	heterogeneous nuclear ribonucleoprotein 1
Location	scaffold6: 32139420 .. 32143110 (-)
Sequence length	1458
RNA-Seq Expression	Spg030541.1
Synteny	Spg030541.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATATAAAGTGGATTGGGTAAAATGACCAAAATGCATAACTTAGATTTTTCAAATATAAATTGAAAATGAGGATGAGAAATGGAAAAACTTAGAAAAAATAGAAAGCTAAAATAATTGAACACCACCAGCATGTAGATTCTTAAGTTTTAATTTTTATTACAAGAATATACATAGTTGTCACAAAATAAAAAAACAAATTAAAAAAAAAAATAAAAAATCATCATCCTCTGTCATGTCTCTTGCCTCCTCCAAATATTCTTGCACCAGTGGATTTGTCAGTCTCTCTCTCTTTCTCTCTCTCACCTTCAACGTTTCATCTAAGAAATTCCATTTCTTTTGATTTATTTAAGGGAAGTGGCAATACCAAAGAAAAGATAGAAAAGAAAAGCAAAGGAAAGGAGAGAGAAGAGGGGATGGGCACATCCTCTGTTTTCCTTACTAACTATTATTCTTCCTCTTCCTCCTCCTCTTCCTTCTCCTTTTCTTAGATCTTAGTTTTCAATCGCTCATTCCCTTTTCATCTGGATCCTCCTCAATGGTGATTTCCCATCTCTGATTCTCTCTTTTTTCCTCGATCGTCTTTCTACTTTATCTGCCTTTCTTCTCCTGATTCTTCTTCGCATGTCCATTTTTTTTTTTTTGTTTGATTTTCGTTTTCGATGCTTGTAGGAGCTTGGGTCATCCTTTCGTTGATTACGAAGCATCGGATGTTTGAAGATTCAATCTGTTTTTGATTTTTTTTTTAGTCTGTCCGAAGCGCCAGTCGGATTCTGTCTGAATTTCCAGTTAAGAATCGTCCCCTTTTGTTACTGCTTAGCTGAATCCACATTTTCAATTGGATTGTTTTTTTTATTTCTGATTTCGGATTTGGGATCGGGTTGTATGGTCCAAATTCGAATCGAACGATTTTTTTATTTATTGAATTTTGATTTTGAATTGGGCGTTTTGCGATGTGTAATAAATCGAAATTGGTTGGGTGATTGATTGTTTGGTCGTAGAAAAGATGGAATCGGATCTTGGCAAGCTCTTCATTGGGGGAATTTCGTGGGATACTGATGAAGAGCGTCTTAGAGAATATTTTGGCAACTATGGCGAAGTGGTTGAGGCTGTGATCATGAGGGATCGCGCCACTGGCCGTGCTCGTGGCTTTGGATTTGTTGTCTTTGCAGATCCTGCTGTTGCCGAAAGAGTCATTTTGGAGAAGCACGTCATCGATGGCCGCACTGTGAGAATTTCTTTTCTTTTTTCTCTGATCATACATTTCAATATCTGATTTTTGTTCTTGGTGATTTTCCCGATATTGAATCTGATTCTGCATAAATTTAGATGTGATGCGTTTTGTGGATGTAATTTGTCCATTTTGAATCAGCTCAATTCTGTACTGGTTTGTGTGAAGATAAGATGGAATGAGATGGAGTTGTTTTCTTGTTAAATGTTGTCGCTCTCAATTTTCAGGTTGAAGCTAAGAAAGCTGTTCCAAAGGATGATCAGAACATGCTGAACAGAAACAGTGGTAGCATTCATGGTTCTCCTAGCTCGGGACGCACGAAGAAGATTTTTGTTGGAGGTTTAGCTTCGACAGTCACGGAGGCTGACTTTCAGAAGTATTTTGATCAGTTTGGCACAATTACTGATGTTGTAGTTATGTATGATCACAGCACCCAAAGGCCAAGGGGATTTGGGTTCATTACTTATGACTCAGAGGAGGCGGTCGATCGTGTGCTGCATAAAACCTTTCATGAGCTCAATGGAAAGATGGTTGAGGTGAAGAGAGCAATCCCGAAAGAACTAACCCCAGGGCCCAACCGGAGCCCTCTTGTAGGATATAACTATGGTATGAGTAGGGCTAGTGGTTTTCTTAACAGCTATACTCAAGGCTATAATATGAGTCCTTTGGGAGGTTATGGGGTCCGGGCAGATGGTAGGTTGAGTCCAATTATTAGCAGCCGAACCGGGGTTCCTCATTATGGTACTGCTAATTATGGAGTGGGTGTGAATTTGGAGCAAGGGCTGAGGCAAGGCTATGGCAGGACTTTGAACATTATGAATAGTCAAGCACAGGAACAAATGTTGAATTCCTATTATAATGGAAATTCAAATAGGTACATTACCCCGATTGGCTACAGCGGGGGCAATGGAAGAGGTGATTCTCCCTTGAGCTCGAGTACCTGGAATGTCTGGGGAAACGGAAGTATGAGCACTGCCATGAACTCTTCCGGCCCTGGTGCTTTCTCTGGCTCTGGAGCGGGGAACTTAAGAGTGGCATATGGAAATAATGATGATAATTGGAGTTCTGCTGCTGTTGCTAATCATGTTGGAGGGAATGCTCCTGGCTATACTTGTGGAAACAATAATGGTTATGCAGTTGGAGACAATGGCTTTGGGTTTAGAGGAGGCTATGGAAGAAATGGAGTAGTCTCGAGTGTGGCAACACGAAAAGCATTTGCTGAAACGACCGATGGTTATGAAAGGTCGTATAGGGACTTATATCGTGATGAAGCGGTGCATGACGAATCGACTTGGCAGCCTACCACTCCTGAACTGGATGGTTCTGTATCTTTTGGCTATGGTCTTGGTAACCTTGCTTCAGATGATCCAGCCAAAAGTTCTGAGAATTTTCTTGCCAGTTATGATGTTTCAAGCAGACAGTCAACTAGAGGTAACGCCCTTTTCTTCGTTTTGTACTCATGATTTCCAATAGGCCCTAACTTGGTAAAACAATTATACTGCAGCAGCATATGAGCCTTCATTAAAACACTCATGAACTAGCAGAACATTTGGTTTTAAACTAAATACTCGCATTTTCAGTTACAGAGATGATCTTTGCTGTGATTAACTACAAACAATAAGAAAGAGGTTTATGATTCTATAATCAGGACAAGAATTGAATTGCAATGCTATAGTCTCTGATACCGGAGTTTAAATTCAGAAGAGTATGCGACATCATAGAAATTGTCTCTGGCATTTTGCAGTGCATGTTAAGAGTGTACTTTCAAGTTCGTAGTTGTTTAAGAGCTGGCAATTGGTTATTCTGCATTTTCAAACTGATACACTTTAGCGAAGGAAAATATATATATGGTCATGAGAATTGCTGTCTTGAAGACCTAGAATTTACCTGAAATTTGAACCATTTGGTAACTGTCGTTGTTATTAACAGGAATTGCTGCGTAGAAGATTGTTGTTTGGATTTCCAACATGATTGGAGTTGAATATAATGCAATGAATCAAATATACGAAGAAGGATTCGTGATTCGTGATTTTTATACTGCTCGTTCAGTTGATGAGCTAAAACGGGAACACTGATCTCATAACTTTTGACTTGGTTCCTCGATCAGAAGGCAATACATATATATATGATATATTCGAAAGAAAGGTGACGACCGAAATCGAGCATTGTAATTTTTCTTTTGCATTTGCTTTTTCCGTTAACAAGACATAGGCTTGTTTCTTGGCATTTGATTGAGGTGTAAAACCAGATTGGCAGATAGATACTCCAGAAGAGTGATTTTCAATTATTTTTATCATGCATCCATATCCAGTGAGGCATGGCAGTAGTAATATCATTAAATGATAAAGCAGATGATTTATTTTTTTTATACATATATCTTTGTTATGCATTTGCTATTCATTTGTTACTCAGATTGTTTATGAATCAATGGAAGATTTGGTTAGTTATTTTTGGTTGACC

mRNA sequence

ATGGAATCGGATCTTGGCAAGCTCTTCATTGGGGGAATTTCGTGGGATACTGATGAAGAGCGTCTTAGAGAATATTTTGGCAACTATGGCGAAGTGGTTGAGGCTGTGATCATGAGGGATCGCGCCACTGGCCGTGCTCGTGGCTTTGGATTTGTTGTCTTTGCAGATCCTGCTGTTGCCGAAAGAGTCATTTTGGAGAAGCACGTCATCGATGGCCGCACTGTTGAAGCTAAGAAAGCTGTTCCAAAGGATGATCAGAACATGCTGAACAGAAACAGTGGTAGCATTCATGGTTCTCCTAGCTCGGGACGCACGAAGAAGATTTTTGTTGGAGGTTTAGCTTCGACAGTCACGGAGGCTGACTTTCAGAAGTATTTTGATCAGTTTGGCACAATTACTGATGTTGTAGTTATGTATGATCACAGCACCCAAAGGCCAAGGGGATTTGGGTTCATTACTTATGACTCAGAGGAGGCGGTCGATCGTGTGCTGCATAAAACCTTTCATGAGCTCAATGGAAAGATGGTTGAGGTGAAGAGAGCAATCCCGAAAGAACTAACCCCAGGGCCCAACCGGAGCCCTCTTGTAGGATATAACTATGGTATGAGTAGGGCTAGTGGTTTTCTTAACAGCTATACTCAAGGCTATAATATGAGTCCTTTGGGAGGTTATGGGGTCCGGGCAGATGGTAGGTTGAGTCCAATTATTAGCAGCCGAACCGGGGTTCCTCATTATGGTACTGCTAATTATGGAGTGGGTGTGAATTTGGAGCAAGGGCTGAGGCAAGGCTATGGCAGGACTTTGAACATTATGAATAGTCAAGCACAGGAACAAATGTTGAATTCCTATTATAATGGAAATTCAAATAGGTACATTACCCCGATTGGCTACAGCGGGGGCAATGGAAGAGGTGATTCTCCCTTGAGCTCGAGTACCTGGAATGTCTGGGGAAACGGAAGTATGAGCACTGCCATGAACTCTTCCGGCCCTGGTGCTTTCTCTGGCTCTGGAGCGGGGAACTTAAGAGTGGCATATGGAAATAATGATGATAATTGGAGTTCTGCTGCTGTTGCTAATCATGTTGGAGGGAATGCTCCTGGCTATACTTGTGGAAACAATAATGGTTATGCAGTTGGAGACAATGGCTTTGGGTTTAGAGGAGGCTATGGAAGAAATGGAGTAGTCTCGAGTGTGGCAACACGAAAAGCATTTGCTGAAACGACCGATGGTTATGAAAGGTCGTATAGGGACTTATATCGTGATGAAGCGGTGCATGACGAATCGACTTGGCAGCCTACCACTCCTGAACTGGATGGTTCTGTATCTTTTGGCTATGGTCTTGGTAACCTTGCTTCAGATGATCCAGCCAAAAGTTCTGAGAATTTTCTTGCCAGTTATGATGTTTCAAGCAGACAGTCAACTAGAGGTAACGCCCTTTTCTTCGTTTTGTACTCATGA

Coding sequence (CDS)

ATGGAATCGGATCTTGGCAAGCTCTTCATTGGGGGAATTTCGTGGGATACTGATGAAGAGCGTCTTAGAGAATATTTTGGCAACTATGGCGAAGTGGTTGAGGCTGTGATCATGAGGGATCGCGCCACTGGCCGTGCTCGTGGCTTTGGATTTGTTGTCTTTGCAGATCCTGCTGTTGCCGAAAGAGTCATTTTGGAGAAGCACGTCATCGATGGCCGCACTGTTGAAGCTAAGAAAGCTGTTCCAAAGGATGATCAGAACATGCTGAACAGAAACAGTGGTAGCATTCATGGTTCTCCTAGCTCGGGACGCACGAAGAAGATTTTTGTTGGAGGTTTAGCTTCGACAGTCACGGAGGCTGACTTTCAGAAGTATTTTGATCAGTTTGGCACAATTACTGATGTTGTAGTTATGTATGATCACAGCACCCAAAGGCCAAGGGGATTTGGGTTCATTACTTATGACTCAGAGGAGGCGGTCGATCGTGTGCTGCATAAAACCTTTCATGAGCTCAATGGAAAGATGGTTGAGGTGAAGAGAGCAATCCCGAAAGAACTAACCCCAGGGCCCAACCGGAGCCCTCTTGTAGGATATAACTATGGTATGAGTAGGGCTAGTGGTTTTCTTAACAGCTATACTCAAGGCTATAATATGAGTCCTTTGGGAGGTTATGGGGTCCGGGCAGATGGTAGGTTGAGTCCAATTATTAGCAGCCGAACCGGGGTTCCTCATTATGGTACTGCTAATTATGGAGTGGGTGTGAATTTGGAGCAAGGGCTGAGGCAAGGCTATGGCAGGACTTTGAACATTATGAATAGTCAAGCACAGGAACAAATGTTGAATTCCTATTATAATGGAAATTCAAATAGGTACATTACCCCGATTGGCTACAGCGGGGGCAATGGAAGAGGTGATTCTCCCTTGAGCTCGAGTACCTGGAATGTCTGGGGAAACGGAAGTATGAGCACTGCCATGAACTCTTCCGGCCCTGGTGCTTTCTCTGGCTCTGGAGCGGGGAACTTAAGAGTGGCATATGGAAATAATGATGATAATTGGAGTTCTGCTGCTGTTGCTAATCATGTTGGAGGGAATGCTCCTGGCTATACTTGTGGAAACAATAATGGTTATGCAGTTGGAGACAATGGCTTTGGGTTTAGAGGAGGCTATGGAAGAAATGGAGTAGTCTCGAGTGTGGCAACACGAAAAGCATTTGCTGAAACGACCGATGGTTATGAAAGGTCGTATAGGGACTTATATCGTGATGAAGCGGTGCATGACGAATCGACTTGGCAGCCTACCACTCCTGAACTGGATGGTTCTGTATCTTTTGGCTATGGTCTTGGTAACCTTGCTTCAGATGATCCAGCCAAAAGTTCTGAGAATTTTCTTGCCAGTTATGATGTTTCAAGCAGACAGTCAACTAGAGGTAACGCCCTTTTCTTCGTTTTGTACTCATGA

Protein sequence

MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVAERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSGRTKKIFVGGLASTVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKRAIPKELTPGPNRSPLVGYNYGMSRASGFLNSYTQGYNMSPLGGYGVRADGRLSPIISSRTGVPHYGTANYGVGVNLEQGLRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYITPIGYSGGNGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGAFSGSGAGNLRVAYGNNDDNWSSAAVANHVGGNAPGYTCGNNNGYAVGDNGFGFRGGYGRNGVVSSVATRKAFAETTDGYERSYRDLYRDEAVHDESTWQPTTPELDGSVSFGYGLGNLASDDPAKSSENFLASYDVSSRQSTRGNALFFVLYS

Homology

[Close]

BLAST of Spg030541.1 vs. NCBI nr
Match: XP_038904623.1 (heterogeneous nuclear ribonucleoprotein 1-like [Benincasa hispida] >XP_038904624.1 heterogeneous nuclear ribonucleoprotein 1-like [Benincasa hispida] >XP_038904625.1 heterogeneous nuclear ribonucleoprotein 1-like [Benincasa hispida] >XP_038904626.1 heterogeneous nuclear ribonucleoprotein 1-like [Benincasa hispida] >XP_038904627.1 heterogeneous nuclear ribonucleoprotein 1-like [Benincasa hispida])

HSP 1 Score: 916.8 bits (2368), Expect = 8.0e-263
Identity = 456/478 (95.40%), Postives = 464/478 (97.07%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDR TGRARGFGFVVFADPAVA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSGRTKKIFVGGLASTVTEA 120
           ERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSGRTKKIFVGGLASTVTEA
Sbjct: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSGRTKKIFVGGLASTVTEA 120

Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180
           DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSE++VDRVLHKTFHELNGKMVEVKR
Sbjct: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEDSVDRVLHKTFHELNGKMVEVKR 180

Query: 181 AIPKELTPGPNRSPLVGYNYGMSRASGFLNSYTQGYNMSPLGGYGVRADGRLSPIISSRT 240
           AIPKELTPGPNRSPLVGYNYGMSR SGFLNSYTQGYNMSPLGGYGVRADGRLSPIISSRT
Sbjct: 181 AIPKELTPGPNRSPLVGYNYGMSRPSGFLNSYTQGYNMSPLGGYGVRADGRLSPIISSRT 240

Query: 241 GVPHYGTANYGVGVNLEQGLRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYITPIGYSGG 300
           GVPH+GTANYGVGVNLEQG+RQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYI PIGYSGG
Sbjct: 241 GVPHFGTANYGVGVNLEQGMRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYIAPIGYSGG 300

Query: 301 NGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGAFSGSGAGNLRVAYGNNDDNWSSAAVANH 360
           NGRGDSPLSSSTWNVWGNGSMSTAMNSSGPG FSGSG GN RVAYGNNDDNWS  AVANH
Sbjct: 301 NGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGTFSGSGMGNFRVAYGNNDDNWSLPAVANH 360

Query: 361 VGGNAPGYTCGNNNGYAVGDNGFGFRGGYGRNGVVSSVATRKAFAETTDGYERSYRDLYR 420
           VGGN PGYTCGNNNGYA+GDNGFGFRGGYGRNGVVS+VATRKAF ETT+GYERSYRDLYR
Sbjct: 361 VGGNVPGYTCGNNNGYAIGDNGFGFRGGYGRNGVVSNVATRKAFVETTNGYERSYRDLYR 420

Query: 421 DEAVHDESTWQPTTPELDGSVSFGYGLGNLASDDPAKSSENFLASYDVSSRQSTRGNA 479
           DEAVHDESTWQ   PELDGSVSFGYGLGNLASDDPAKSSE+FLASYDVSSRQSTRG A
Sbjct: 421 DEAVHDESTWQSAAPELDGSVSFGYGLGNLASDDPAKSSESFLASYDVSSRQSTRGIA 478

[Close]

BLAST of Spg030541.1 vs. NCBI nr
Match: XP_004149577.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN56055.1 hypothetical protein Csa_009945 [Cucumis sativus])

HSP 1 Score: 892.9 bits (2306), Expect = 1.2e-255
Identity = 447/479 (93.32%), Postives = 458/479 (95.62%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           MESDLGKLFIGGISWDTDEERLREYFG+YGEVVEAVIMRDR TGRARGFGFVVFADP VA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVA 60

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSGRTKKIFVGGLASTVTEA 120
           ERVIL+KHVIDGRTVEAKKAVPKDDQNMLNR+SGSIHGSPSSGRTKKIFVGGLASTVTEA
Sbjct: 61  ERVILDKHVIDGRTVEAKKAVPKDDQNMLNRSSGSIHGSPSSGRTKKIFVGGLASTVTEA 120

Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180
           DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEE VDRVLHKTFHELNGKMVEVKR
Sbjct: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKR 180

Query: 181 AIPKELTPGPNRSPLVGYNYGMSRASGFLNSYTQGYNMSPLGGYGVRADGRLSPIISSRT 240
           AIPKELTPGPNRSPLVGYNYGMSR SGFLNSYTQGYNMSPLGGYGVR DGRLSPIISSRT
Sbjct: 181 AIPKELTPGPNRSPLVGYNYGMSRPSGFLNSYTQGYNMSPLGGYGVRPDGRLSPIISSRT 240

Query: 241 GVPHYGTANYGVGVNLEQGLRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYITPIGYSGG 300
           GVPH+GTANYGVGVNLEQG+RQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYI PIGYSGG
Sbjct: 241 GVPHFGTANYGVGVNLEQGMRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYIAPIGYSGG 300

Query: 301 NGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGAFSGSGAGNLRVAYGNNDDNWSSAAVANH 360
           NGRGDSPLSSSTWNVWGNGSMS AM+SSGPGAFSGSG GN RVAYGNNDDNWSS AVANH
Sbjct: 301 NGRGDSPLSSSTWNVWGNGSMSNAMSSSGPGAFSGSGTGNFRVAYGNNDDNWSSPAVANH 360

Query: 361 VGGNAPGYTCGNNNGYAVGD-NGFGFRGGYGRNGVVSSVATRKAFAETTDGYERSYRDLY 420
           VG N PGYT GNNNGYA+GD NGFGFRGGYGRNGVVS+VA RKAF E  +GYERSYRDLY
Sbjct: 361 VGANVPGYTFGNNNGYAIGDNNGFGFRGGYGRNGVVSNVAARKAFVEMNNGYERSYRDLY 420

Query: 421 RDEAVHDESTWQPTTPELDGSVSFGYGLGNLASDDPAKSSENFLASYDVSSRQSTRGNA 479
           RDEAVHD+STWQ T PELDGSVSFGYGLGNLASDDPAKSSE+FLASYDVSSRQSTRG A
Sbjct: 421 RDEAVHDDSTWQSTAPELDGSVSFGYGLGNLASDDPAKSSESFLASYDVSSRQSTRGIA 479

[Close]

BLAST of Spg030541.1 vs. NCBI nr
Match: XP_008449083.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo] >KAA0065786.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa] >TYJ96525.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 890.6 bits (2300), Expect = 6.2e-255
Identity = 444/479 (92.69%), Postives = 455/479 (94.99%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           MESDLGKLFIGGISWDTDEERLREYFG YGEVVEAVIMRDR TGRARGFGFVVFADP VA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLREYFGQYGEVVEAVIMRDRTTGRARGFGFVVFADPGVA 60

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSGRTKKIFVGGLASTVTEA 120
           ERVIL+KHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSP SGRTKKIFVGGLASTVTEA
Sbjct: 61  ERVILDKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPGSGRTKKIFVGGLASTVTEA 120

Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180
           DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEE VDRVLHKTFHELNGKMVEVKR
Sbjct: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKR 180

Query: 181 AIPKELTPGPNRSPLVGYNYGMSRASGFLNSYTQGYNMSPLGGYGVRADGRLSPIISSRT 240
           AIPKELTPGPNRSPLVGYNYGMSR SGFLNSYTQGYNMSPLGGYGVR DGRLSPIISSRT
Sbjct: 181 AIPKELTPGPNRSPLVGYNYGMSRPSGFLNSYTQGYNMSPLGGYGVRPDGRLSPIISSRT 240

Query: 241 GVPHYGTANYGVGVNLEQGLRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYITPIGYSGG 300
           GVPH+GTANYGVGVNLEQG+RQGYGRTLN+MNSQAQEQMLNSYYNGNSNRYI PIGYSGG
Sbjct: 241 GVPHFGTANYGVGVNLEQGMRQGYGRTLNVMNSQAQEQMLNSYYNGNSNRYIAPIGYSGG 300

Query: 301 NGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGAFSGSGAGNLRVAYGNNDDNWSSAAVANH 360
           NGRGDSPLSSSTWNVWGNGSMS AM+SSGPG FSGSG GN RVAYGNNDDNW+S AVANH
Sbjct: 301 NGRGDSPLSSSTWNVWGNGSMSNAMSSSGPGTFSGSGTGNFRVAYGNNDDNWNSPAVANH 360

Query: 361 VGGNAPGYTCGNNNGYAVGD-NGFGFRGGYGRNGVVSSVATRKAFAETTDGYERSYRDLY 420
           VG N PGYT GNNNGYA+GD NGFGFRGGYGRNGVVS+VA RKAF ET +GYERSYRDLY
Sbjct: 361 VGANVPGYTFGNNNGYAIGDNNGFGFRGGYGRNGVVSNVAARKAFVETNNGYERSYRDLY 420

Query: 421 RDEAVHDESTWQPTTPELDGSVSFGYGLGNLASDDPAKSSENFLASYDVSSRQSTRGNA 479
           RDE VHD+STWQ T PELDGSVSFGYGLGNLASDDPAKSSE+FLASYDVSSRQSTRG A
Sbjct: 421 RDEVVHDDSTWQSTAPELDGSVSFGYGLGNLASDDPAKSSESFLASYDVSSRQSTRGIA 479

[Close]

BLAST of Spg030541.1 vs. NCBI nr
Match: XP_022158863.1 (heterogeneous nuclear ribonucleoprotein 1-like [Momordica charantia] >XP_022158864.1 heterogeneous nuclear ribonucleoprotein 1-like [Momordica charantia])

HSP 1 Score: 882.9 bits (2280), Expect = 1.3e-252
Identity = 443/479 (92.48%), Postives = 462/479 (96.45%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSGRTKKIFVGGLASTVTEA 120
           ERVILEKHVIDGRTVEAKKAVPKDDQN+LNRN+GSIHGSPSSGRTKKIFVGGLASTVTEA
Sbjct: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNILNRNAGSIHGSPSSGRTKKIFVGGLASTVTEA 120

Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180
           DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR
Sbjct: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180

Query: 181 AIPKELTPGPNRSPLVGYNYGMSRASGFLNSYTQGYNMSPLGGYGVRADGRLSPIISSRT 240
           AIPKELTPGPNRSPLVGYNYGMSRASGFLN+YTQGYNMSPLGGYGVRADGRLSPIISSRT
Sbjct: 181 AIPKELTPGPNRSPLVGYNYGMSRASGFLNNYTQGYNMSPLGGYGVRADGRLSPIISSRT 240

Query: 241 GVPHYGTANYGVGVNLEQGLRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYITPIGYSGG 300
           GVPH+G ANYGVG+NLEQGLRQGYGRT+NIMN+QAQEQMLNSYYNGNSNRYITPIGYSGG
Sbjct: 241 GVPHFGAANYGVGMNLEQGLRQGYGRTVNIMNTQAQEQMLNSYYNGNSNRYITPIGYSGG 300

Query: 301 NGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGAFSGSGAGNLRVAYGNNDDNWSSAAVANH 360
           NGR DSPLSSSTWNVWGNGSM+T MN+ GPG+FSGSG+G+ RVAYGNNDDNW SAA ANH
Sbjct: 301 NGRDDSPLSSSTWNVWGNGSMTTPMNTPGPGSFSGSGSGSFRVAYGNNDDNWISAAAANH 360

Query: 361 VGGNAPGYTCGNNNGYAVGDNGFGFR-GGYGRNGVVSSVATRKAFAETTDGYERSYRDLY 420
           VGGNAPGYTC  +NGY +GDNGFGFR GGYGRNG V S ATRKAFAETT+GYERSYRDLY
Sbjct: 361 VGGNAPGYTCA-SNGYGIGDNGFGFRGGGYGRNG-VPSAATRKAFAETTEGYERSYRDLY 420

Query: 421 RDEAVHDESTWQPTTPELDGSVSFGYGLGNLASDDPAKSSENFLASYDVSSRQSTRGNA 479
           RDEAVHD+STWQ T PELDGSVSFGYGLGNLASDDPA+SSE+FLASYDVS+RQSTRG A
Sbjct: 421 RDEAVHDDSTWQSTAPELDGSVSFGYGLGNLASDDPARSSESFLASYDVSNRQSTRGIA 477

[Close]

BLAST of Spg030541.1 vs. NCBI nr
Match: KAG7028405.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 852.0 bits (2200), Expect = 2.4e-243
Identity = 431/480 (89.79%), Postives = 453/480 (94.38%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           MESDLGKLFIGGISWDTDEERLR+YFG+YGEVVEAVIMRDR+TGRARGFGFVVFADPAVA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIMRDRSTGRARGFGFVVFADPAVA 60

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSGRTKKIFVGGLASTVTEA 120
           ERVILEKH+IDGRTVEAKKAVPKDDQN LNRN+GSIHGSP SGRTKKIFVGGLASTVTEA
Sbjct: 61  ERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPISGRTKKIFVGGLASTVTEA 120

Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180
           DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR
Sbjct: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180

Query: 181 AIPKELTPGPNRSPLVGYNYGMSRASGFLNSYTQGYNMSPLGGYGVRADGRLSPIISSRT 240
           AIPKELTPG NRSP+VGYNYGMSRASGFLNSYTQ YNMSPLG YGVRADGRLSP+ISSRT
Sbjct: 181 AIPKELTPGSNRSPIVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVISSRT 240

Query: 241 GVPHYGTANYGVGVNLEQGLRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYITPIGYSGG 300
           G+PH+G+ NYGVGVNLEQGLRQGYGR+LNIMNSQAQEQMLNSYYNGNSNR+ITPIGYSGG
Sbjct: 241 GIPHFGSNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIGYSGG 300

Query: 301 NGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGAFSGSGAGNLRVAYGNNDDNWSSAAVANH 360
           NGRGDS LSSSTWNVWGNGSM+ AMNS  PGAFSGSG GN RVAYGN+DDNWSSAAV NH
Sbjct: 301 NGRGDSLLSSSTWNVWGNGSMNNAMNSPDPGAFSGSGMGNFRVAYGNSDDNWSSAAVGNH 360

Query: 361 VGGNA-PGYTCGNNNGYAVGDNGFGFRGG-YGRNGVVSSVATRKAFAETTDGYERSYRDL 420
           VG NA PGYT  NNNGY +G++ FG RGG YGRNGVVSSVATRKAFAETTDGYERSYR+L
Sbjct: 361 VGVNAPPGYT--NNNGYGIGESEFGIRGGNYGRNGVVSSVATRKAFAETTDGYERSYREL 420

Query: 421 YRDEAVHDESTWQPTTPELDGSVSFGYGLGNLASDDPAKSSENFLASYDVSSRQSTRGNA 479
           YRD  VHD+STW  TTPELDGSV+FGYGLG+L SDDPAKSSENFLASYDVSSRQS+RG A
Sbjct: 421 YRDGTVHDDSTWPSTTPELDGSVAFGYGLGSLPSDDPAKSSENFLASYDVSSRQSSRGIA 478

[Close]

BLAST of Spg030541.1 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-66
Identity = 172/409 (42.05%), Postives = 235/409 (57.46%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           M+SD GKLF+GGISW+TDE++LRE+F NYGEV +A++MRD+ TGR RGFGFV+F+DP+V 
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSG-----RTKKIFVGGLAS 120
           +RV+ EKH ID R V+ K+A+ +++Q +  R +G+++ S SSG     +TKKIFVGGL  
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGR-TGNLNTSRSSGGDAYNKTKKIFVGGLPP 120

Query: 121 TVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKM 180
           T+T+ +F++YF+ +G +TDV +MYD +T RPRGFGF+++DSE+AVD VLHKTFH+L+GK 
Sbjct: 121 TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQ 180

Query: 181 VEVKRAIPKELTPGPNRSPLVGYNYGMSRASGFLNSYTQGYNMSPLGGYGVRADGRLSPI 240
           VEVKRA+PK+  PG           G S   G    Y QGY  +     G     R    
Sbjct: 181 VEVKRALPKDANPGGG---------GRSMGGGGSGGY-QGYGGNESSYDGRMDSNRFLQH 240

Query: 241 ISSRTGVPHYGTANYGVGV-NLEQGLRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYITP 300
            S   G+P YG++ YG G  N   G   GYG       S        +   G +N  I  
Sbjct: 241 QSVGNGLPSYGSSGYGAGYGNGSNG--AGYGAYGGYTGSAGGYGAGATAGYGATN--IPG 300

Query: 301 IGYSGGNG-----RGDSPLSSSTWNV-WGNGSMSTAMNSSG--PGAFSGSGAGNLRVAYG 360
            GY    G       D+P SS   N  +G+G+  +     G  P   S SG  N    YG
Sbjct: 301 AGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYG 360

Query: 361 ---NNDDNWSSAAVANHVGGNAPGYTCGNNNGYAVGDNGFGFRGGYGRN 393
               +D  + + A    VGG   G   G+NN  + G  G G+  G  R+
Sbjct: 361 GYSGSDSGYGNQAAYGVVGGRPSG--GGSNNPGSGGYMGGGYGDGSWRS 392

[Close]

BLAST of Spg030541.1 vs. ExPASy Swiss-Prot
Match: Q9C652 (RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-46
Identity = 95/199 (47.74%), Postives = 134/199 (67.34%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           M+ D  KLF+GGI+ +T EE L++YF  YG V+EAV+ +++ TG+ RGFGFV FA+    
Sbjct: 1   MDYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDV 60

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDD-----------QNMLNRNSGSIHGSPSSG---RTK 120
            + + + H I G+ V+ +KA+ K +           +  + + +G +    S+G   RTK
Sbjct: 61  VKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQFLERKVQQMNGGLREMSSNGVTSRTK 120

Query: 121 KIFVGGLASTVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHK 180
           KIFVGGL+S  TE +F+ YF++FG  TDVVVM+D  T RPRGFGF+TYDSE++V+ V+  
Sbjct: 121 KIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQS 180

Query: 181 TFHELNGKMVEVKRAIPKE 186
            FHEL+ K VEVKRAIPKE
Sbjct: 181 NFHELSDKRVEVKRAIPKE 199

[Close]

BLAST of Spg030541.1 vs. ExPASy Swiss-Prot
Match: Q9JII5 (DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2)

HSP 1 Score: 186.0 bits (471), Expect = 9.8e-46
Identity = 108/280 (38.57%), Postives = 152/280 (54.29%), Query Frame = 0


Query: 4   DLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVAERV 63
           ++GKLF+GG+ W T +E LR YF  YGEVV+ VIM+D+ T ++RGFGFV F DP     V
Sbjct: 8   EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67

Query: 64  ILEK-HVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSP--SSGRTKKIFVGGLASTVTEA 123
           +  + H +DGR ++ K   P+  Q    R        P   S ++ KIFVGG+     E 
Sbjct: 68  LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGET 127

Query: 124 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 183
           + ++YF +FG +T+VV++YD   QRPRGFGFIT++ E++VD+ ++  FH++ GK VEVKR
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187

Query: 184 AIP---KELTPGPNRSPLVGYNYGMSRASGFLN----SYTQGYNM--------SPLGGYG 243
           A P   K   PG   +   G     S A+G+      ++ QGY            +GGYG
Sbjct: 188 AEPRDSKNQAPGQPGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYG 247

Query: 244 VRADGRLSPIISSRTGVPHYGTANYGVGVNLEQGLRQGYG 266
               GR +P          Y  +    G    QG  QGYG
Sbjct: 248 PPPAGRGAP--PPPPPFTSYIVSTPPGGFPPPQGFPQGYG 285

[Close]

BLAST of Spg030541.1 vs. ExPASy Swiss-Prot
Match: Q98SJ2 (DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.2e-45
Identity = 112/288 (38.89%), Postives = 157/288 (54.51%), Query Frame = 0


Query: 4   DLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVAERV 63
           ++GKLF+GG+ W T +E LR YF  YGEVV+ VIM+D+ T ++RGFGFV F DP     V
Sbjct: 8   EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67

Query: 64  ILEK-HVIDGRTVEAKKAVPKDDQNMLNR-NSGSIHGSP--SSGRTKKIFVGGLASTVTE 123
           +  + H +DGR ++ K   P+  Q   +R   G     P   + R+ KIFVGG+     E
Sbjct: 68  LASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGE 127

Query: 124 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVK 183
            + ++YF++FG +T+VV++YD   QRPRGFGFIT++ E++VD+ ++  FH++ GK VEVK
Sbjct: 128 TELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 187

Query: 184 RAIP---KELTPGPNRSPLVGYNYGMSRASGFLN---SYTQGYNM--------SPLGGYG 243
           RA P   K  TPGP  S   G     S A+G+        QGY+           +GGYG
Sbjct: 188 RAEPRDSKSQTPGPPGSNQWGSRAMQSTANGWTGQPPQTWQGYSPQGMWMPTGQTIGGYG 247

Query: 244 VRADGR--------LSPIISSRTGVPHYGTANYGVGVNLEQGLRQGYG 266
             A GR         +P + S T  P      +  G         GYG
Sbjct: 248 QPA-GRGGPPPPPSFAPFLVSTTPGPFPPPQGFPPGYATPPPFGYGYG 294

[Close]

BLAST of Spg030541.1 vs. ExPASy Swiss-Prot
Match: Q96EP5 (DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.7e-45
Identity = 108/280 (38.57%), Postives = 152/280 (54.29%), Query Frame = 0


Query: 4   DLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVAERV 63
           ++GKLF+GG+ W T +E LR YF  YGEVV+ VIM+D+ T ++RGFGFV F DP     V
Sbjct: 8   EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67

Query: 64  ILEK-HVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSGRTK--KIFVGGLASTVTEA 123
           +  + H +DGR ++ K   P+  Q    R        P S  +K  KIFVGG+     E 
Sbjct: 68  LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGET 127

Query: 124 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 183
           + ++YF +FG +T+VV++YD   QRPRGFGFIT++ E++VD+ ++  FH++ GK VEVKR
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187

Query: 184 AIP---KELTPGPNRSPLVGYNYGMSRASGFLN----SYTQGYNM--------SPLGGYG 243
           A P   K   PG   +   G     + A+G+      ++ QGY            +GGYG
Sbjct: 188 AEPRDSKSQAPGQPGASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYG 247

Query: 244 VRADGRLSPIISSRTGVPHYGTANYGVGVNLEQGLRQGYG 266
               GR +P          Y  +    G    QG  QGYG
Sbjct: 248 PPPAGRGAP--PPPPPFTSYIVSTPPGGFPPPQGFPQGYG 285

[Close]

BLAST of Spg030541.1 vs. ExPASy TrEMBL
Match: A0A0A0L293 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G062570 PE=4 SV=1)

HSP 1 Score: 892.9 bits (2306), Expect = 6.0e-256
Identity = 447/479 (93.32%), Postives = 458/479 (95.62%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           MESDLGKLFIGGISWDTDEERLREYFG+YGEVVEAVIMRDR TGRARGFGFVVFADP VA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVA 60

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSGRTKKIFVGGLASTVTEA 120
           ERVIL+KHVIDGRTVEAKKAVPKDDQNMLNR+SGSIHGSPSSGRTKKIFVGGLASTVTEA
Sbjct: 61  ERVILDKHVIDGRTVEAKKAVPKDDQNMLNRSSGSIHGSPSSGRTKKIFVGGLASTVTEA 120

Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180
           DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEE VDRVLHKTFHELNGKMVEVKR
Sbjct: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKR 180

Query: 181 AIPKELTPGPNRSPLVGYNYGMSRASGFLNSYTQGYNMSPLGGYGVRADGRLSPIISSRT 240
           AIPKELTPGPNRSPLVGYNYGMSR SGFLNSYTQGYNMSPLGGYGVR DGRLSPIISSRT
Sbjct: 181 AIPKELTPGPNRSPLVGYNYGMSRPSGFLNSYTQGYNMSPLGGYGVRPDGRLSPIISSRT 240

Query: 241 GVPHYGTANYGVGVNLEQGLRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYITPIGYSGG 300
           GVPH+GTANYGVGVNLEQG+RQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYI PIGYSGG
Sbjct: 241 GVPHFGTANYGVGVNLEQGMRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYIAPIGYSGG 300

Query: 301 NGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGAFSGSGAGNLRVAYGNNDDNWSSAAVANH 360
           NGRGDSPLSSSTWNVWGNGSMS AM+SSGPGAFSGSG GN RVAYGNNDDNWSS AVANH
Sbjct: 301 NGRGDSPLSSSTWNVWGNGSMSNAMSSSGPGAFSGSGTGNFRVAYGNNDDNWSSPAVANH 360

Query: 361 VGGNAPGYTCGNNNGYAVGD-NGFGFRGGYGRNGVVSSVATRKAFAETTDGYERSYRDLY 420
           VG N PGYT GNNNGYA+GD NGFGFRGGYGRNGVVS+VA RKAF E  +GYERSYRDLY
Sbjct: 361 VGANVPGYTFGNNNGYAIGDNNGFGFRGGYGRNGVVSNVAARKAFVEMNNGYERSYRDLY 420

Query: 421 RDEAVHDESTWQPTTPELDGSVSFGYGLGNLASDDPAKSSENFLASYDVSSRQSTRGNA 479
           RDEAVHD+STWQ T PELDGSVSFGYGLGNLASDDPAKSSE+FLASYDVSSRQSTRG A
Sbjct: 421 RDEAVHDDSTWQSTAPELDGSVSFGYGLGNLASDDPAKSSESFLASYDVSSRQSTRGIA 479

[Close]

BLAST of Spg030541.1 vs. ExPASy TrEMBL
Match: A0A5A7VHF8 (Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001770 PE=4 SV=1)

HSP 1 Score: 890.6 bits (2300), Expect = 3.0e-255
Identity = 444/479 (92.69%), Postives = 455/479 (94.99%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           MESDLGKLFIGGISWDTDEERLREYFG YGEVVEAVIMRDR TGRARGFGFVVFADP VA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLREYFGQYGEVVEAVIMRDRTTGRARGFGFVVFADPGVA 60

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSGRTKKIFVGGLASTVTEA 120
           ERVIL+KHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSP SGRTKKIFVGGLASTVTEA
Sbjct: 61  ERVILDKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPGSGRTKKIFVGGLASTVTEA 120

Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180
           DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEE VDRVLHKTFHELNGKMVEVKR
Sbjct: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKR 180

Query: 181 AIPKELTPGPNRSPLVGYNYGMSRASGFLNSYTQGYNMSPLGGYGVRADGRLSPIISSRT 240
           AIPKELTPGPNRSPLVGYNYGMSR SGFLNSYTQGYNMSPLGGYGVR DGRLSPIISSRT
Sbjct: 181 AIPKELTPGPNRSPLVGYNYGMSRPSGFLNSYTQGYNMSPLGGYGVRPDGRLSPIISSRT 240

Query: 241 GVPHYGTANYGVGVNLEQGLRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYITPIGYSGG 300
           GVPH+GTANYGVGVNLEQG+RQGYGRTLN+MNSQAQEQMLNSYYNGNSNRYI PIGYSGG
Sbjct: 241 GVPHFGTANYGVGVNLEQGMRQGYGRTLNVMNSQAQEQMLNSYYNGNSNRYIAPIGYSGG 300

Query: 301 NGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGAFSGSGAGNLRVAYGNNDDNWSSAAVANH 360
           NGRGDSPLSSSTWNVWGNGSMS AM+SSGPG FSGSG GN RVAYGNNDDNW+S AVANH
Sbjct: 301 NGRGDSPLSSSTWNVWGNGSMSNAMSSSGPGTFSGSGTGNFRVAYGNNDDNWNSPAVANH 360

Query: 361 VGGNAPGYTCGNNNGYAVGD-NGFGFRGGYGRNGVVSSVATRKAFAETTDGYERSYRDLY 420
           VG N PGYT GNNNGYA+GD NGFGFRGGYGRNGVVS+VA RKAF ET +GYERSYRDLY
Sbjct: 361 VGANVPGYTFGNNNGYAIGDNNGFGFRGGYGRNGVVSNVAARKAFVETNNGYERSYRDLY 420

Query: 421 RDEAVHDESTWQPTTPELDGSVSFGYGLGNLASDDPAKSSENFLASYDVSSRQSTRGNA 479
           RDE VHD+STWQ T PELDGSVSFGYGLGNLASDDPAKSSE+FLASYDVSSRQSTRG A
Sbjct: 421 RDEVVHDDSTWQSTAPELDGSVSFGYGLGNLASDDPAKSSESFLASYDVSSRQSTRGIA 479

[Close]

BLAST of Spg030541.1 vs. ExPASy TrEMBL
Match: A0A1S3BKM2 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103491055 PE=4 SV=1)

HSP 1 Score: 890.6 bits (2300), Expect = 3.0e-255
Identity = 444/479 (92.69%), Postives = 455/479 (94.99%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           MESDLGKLFIGGISWDTDEERLREYFG YGEVVEAVIMRDR TGRARGFGFVVFADP VA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLREYFGQYGEVVEAVIMRDRTTGRARGFGFVVFADPGVA 60

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSGRTKKIFVGGLASTVTEA 120
           ERVIL+KHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSP SGRTKKIFVGGLASTVTEA
Sbjct: 61  ERVILDKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPGSGRTKKIFVGGLASTVTEA 120

Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180
           DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEE VDRVLHKTFHELNGKMVEVKR
Sbjct: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKR 180

Query: 181 AIPKELTPGPNRSPLVGYNYGMSRASGFLNSYTQGYNMSPLGGYGVRADGRLSPIISSRT 240
           AIPKELTPGPNRSPLVGYNYGMSR SGFLNSYTQGYNMSPLGGYGVR DGRLSPIISSRT
Sbjct: 181 AIPKELTPGPNRSPLVGYNYGMSRPSGFLNSYTQGYNMSPLGGYGVRPDGRLSPIISSRT 240

Query: 241 GVPHYGTANYGVGVNLEQGLRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYITPIGYSGG 300
           GVPH+GTANYGVGVNLEQG+RQGYGRTLN+MNSQAQEQMLNSYYNGNSNRYI PIGYSGG
Sbjct: 241 GVPHFGTANYGVGVNLEQGMRQGYGRTLNVMNSQAQEQMLNSYYNGNSNRYIAPIGYSGG 300

Query: 301 NGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGAFSGSGAGNLRVAYGNNDDNWSSAAVANH 360
           NGRGDSPLSSSTWNVWGNGSMS AM+SSGPG FSGSG GN RVAYGNNDDNW+S AVANH
Sbjct: 301 NGRGDSPLSSSTWNVWGNGSMSNAMSSSGPGTFSGSGTGNFRVAYGNNDDNWNSPAVANH 360

Query: 361 VGGNAPGYTCGNNNGYAVGD-NGFGFRGGYGRNGVVSSVATRKAFAETTDGYERSYRDLY 420
           VG N PGYT GNNNGYA+GD NGFGFRGGYGRNGVVS+VA RKAF ET +GYERSYRDLY
Sbjct: 361 VGANVPGYTFGNNNGYAIGDNNGFGFRGGYGRNGVVSNVAARKAFVETNNGYERSYRDLY 420

Query: 421 RDEAVHDESTWQPTTPELDGSVSFGYGLGNLASDDPAKSSENFLASYDVSSRQSTRGNA 479
           RDE VHD+STWQ T PELDGSVSFGYGLGNLASDDPAKSSE+FLASYDVSSRQSTRG A
Sbjct: 421 RDEVVHDDSTWQSTAPELDGSVSFGYGLGNLASDDPAKSSESFLASYDVSSRQSTRGIA 479

[Close]

BLAST of Spg030541.1 vs. ExPASy TrEMBL
Match: A0A6J1DX93 (heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN=LOC111025325 PE=4 SV=1)

HSP 1 Score: 882.9 bits (2280), Expect = 6.2e-253
Identity = 443/479 (92.48%), Postives = 462/479 (96.45%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA
Sbjct: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSGRTKKIFVGGLASTVTEA 120
           ERVILEKHVIDGRTVEAKKAVPKDDQN+LNRN+GSIHGSPSSGRTKKIFVGGLASTVTEA
Sbjct: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNILNRNAGSIHGSPSSGRTKKIFVGGLASTVTEA 120

Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180
           DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR
Sbjct: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180

Query: 181 AIPKELTPGPNRSPLVGYNYGMSRASGFLNSYTQGYNMSPLGGYGVRADGRLSPIISSRT 240
           AIPKELTPGPNRSPLVGYNYGMSRASGFLN+YTQGYNMSPLGGYGVRADGRLSPIISSRT
Sbjct: 181 AIPKELTPGPNRSPLVGYNYGMSRASGFLNNYTQGYNMSPLGGYGVRADGRLSPIISSRT 240

Query: 241 GVPHYGTANYGVGVNLEQGLRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYITPIGYSGG 300
           GVPH+G ANYGVG+NLEQGLRQGYGRT+NIMN+QAQEQMLNSYYNGNSNRYITPIGYSGG
Sbjct: 241 GVPHFGAANYGVGMNLEQGLRQGYGRTVNIMNTQAQEQMLNSYYNGNSNRYITPIGYSGG 300

Query: 301 NGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGAFSGSGAGNLRVAYGNNDDNWSSAAVANH 360
           NGR DSPLSSSTWNVWGNGSM+T MN+ GPG+FSGSG+G+ RVAYGNNDDNW SAA ANH
Sbjct: 301 NGRDDSPLSSSTWNVWGNGSMTTPMNTPGPGSFSGSGSGSFRVAYGNNDDNWISAAAANH 360

Query: 361 VGGNAPGYTCGNNNGYAVGDNGFGFR-GGYGRNGVVSSVATRKAFAETTDGYERSYRDLY 420
           VGGNAPGYTC  +NGY +GDNGFGFR GGYGRNG V S ATRKAFAETT+GYERSYRDLY
Sbjct: 361 VGGNAPGYTCA-SNGYGIGDNGFGFRGGGYGRNG-VPSAATRKAFAETTEGYERSYRDLY 420

Query: 421 RDEAVHDESTWQPTTPELDGSVSFGYGLGNLASDDPAKSSENFLASYDVSSRQSTRGNA 479
           RDEAVHD+STWQ T PELDGSVSFGYGLGNLASDDPA+SSE+FLASYDVS+RQSTRG A
Sbjct: 421 RDEAVHDDSTWQSTAPELDGSVSFGYGLGNLASDDPARSSESFLASYDVSNRQSTRGIA 477

[Close]

BLAST of Spg030541.1 vs. ExPASy TrEMBL
Match: A0A6J1KSZ8 (heterogeneous nuclear ribonucleoprotein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498392 PE=4 SV=1)

HSP 1 Score: 847.4 bits (2188), Expect = 2.9e-242
Identity = 429/480 (89.38%), Postives = 450/480 (93.75%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           MESDLGKLFIGGISWDTDEERLR+YFG+YGEVVEAVI+RDR+TGRARGFGFVVFADPAVA
Sbjct: 10  MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 69

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPSSGRTKKIFVGGLASTVTEA 120
           ERVILEKH+IDGRTVEAKKAVPKDDQN LNRN+GSIHGSP SGRTKKIFVGGLASTVTEA
Sbjct: 70  ERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPISGRTKKIFVGGLASTVTEA 129

Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180
           DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVD VLHKTFHELNGKMVEVKR
Sbjct: 130 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEVKR 189

Query: 181 AIPKELTPGPNRSPLVGYNYGMSRASGFLNSYTQGYNMSPLGGYGVRADGRLSPIISSRT 240
           AIPKELTPG NRSP+VGYNYGMSRASGFLNSYTQ YNMSPLG YGVRADGRLSP+ SSRT
Sbjct: 190 AIPKELTPGSNRSPVVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVFSSRT 249

Query: 241 GVPHYGTANYGVGVNLEQGLRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYITPIGYSGG 300
           G+PH+GT NYGVGVNLEQGLRQGYGR+LNIMNSQAQEQMLNSYYNGNSNR+ITPIGYSGG
Sbjct: 250 GIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIGYSGG 309

Query: 301 NGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGAFSGSGAGNLRVAYGNNDDNWSSAAVANH 360
           NGRGDS LSSSTWNVWGNGSM+ AMNS  PGAFSGSG GN RVAYGNNDDNWSSAAV NH
Sbjct: 310 NGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRVAYGNNDDNWSSAAVGNH 369

Query: 361 VGGNA-PGYTCGNNNGYAVGDNGFGFR-GGYGRNGVVSSVATRKAFAETTDGYERSYRDL 420
           VG NA PGYT  NNNGY +G++ FG R GGYGRNGVVSSVAT+KAFAETTDGYERSYR+L
Sbjct: 370 VGVNAPPGYT--NNNGYGIGESEFGIRGGGYGRNGVVSSVATQKAFAETTDGYERSYREL 429

Query: 421 YRDEAVHDESTWQPTTPELDGSVSFGYGLGNLASDDPAKSSENFLASYDVSSRQSTRGNA 479
           YRD  VHD+STW  TTPELDGSV FGYGLG+LASDDPAKSSENFLASYDVSSRQ +RG A
Sbjct: 430 YRDGTVHDDSTWPSTTPELDGSVPFGYGLGSLASDDPAKSSENFLASYDVSSRQPSRGIA 487

[Close]

BLAST of Spg030541.1 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 464.9 bits (1195), Expect = 7.8e-131
Identity = 265/495 (53.54%), Postives = 338/495 (68.28%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           M+SD GKLFIGGISWDT+EERL+EYF ++GEV+EAVI++DR TGRARGFGFVVFADPAVA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNR-NSGSIHGSPSS-GRTKKIFVGGLASTVT 120
           E VI EKH IDGR VEAKKAVP+DDQNM+NR NS SI GSP   GRT+KIFVGGL S+VT
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVT 120

Query: 121 EADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEV 180
           E+DF+ YF+QFGT TDVVVMYDH+TQRPRGFGFITYDSEEAV++VL KTFHELNGKMVEV
Sbjct: 121 ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEV 180

Query: 181 KRAIPKELTPGPNRSPL-VGYNYGMSRASGFLNSYTQGYNMSPLGGYGVRADGRLSPIIS 240
           KRA+PKEL+PGP+RSPL  GY+YG++R +  LN Y QG+N + +GGYG+R DGR SP+ +
Sbjct: 181 KRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGA 240

Query: 241 SRTGVPHYGTANYGVGVNLEQGLRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYITPIGY 300
            R+G  +Y ++ YG+ VN +QGL  G+    N   +    + ++ YY GN+NR+   +GY
Sbjct: 241 GRSGFANY-SSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFGPAVGY 300

Query: 301 SGGNGRGDSP-LSSSTWNVWGN------GSMSTAMNSSGPGAFSGSGAGNLRVAYGNNDD 360
            GGNG G+S   SS T N+WGN       + +T  NS+     S SG   L   +GN+  
Sbjct: 301 EGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGV 360

Query: 361 NWSSAAVANHVGGNAP---GYTCGNNNGYAVGDNGFGFRGGYGRNGVVSSVATRKAFAET 420
           NW +    N+   N     GY     +G+ +G  G+  R   G N    S +   A A  
Sbjct: 361 NWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNP-GANKAAPSSSFSSASATN 420

Query: 421 TDGYERS-YRDLYRDEAVHDESTWQPTTPELDGSVSFGYGLGN--LASDDPAKSSE-NFL 479
             GY+ +   + Y + AV+ + TW+  TPE +G   F YG+G    +SD  A+SS   ++
Sbjct: 421 NTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSPGYV 480

[Close]

BLAST of Spg030541.1 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 464.5 bits (1194), Expect = 1.0e-130
Identity = 264/493 (53.55%), Postives = 337/493 (68.36%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           M+SD GKLFIGGISWDT+EERL+EYF ++GEV+EAVI++DR TGRARGFGFVVFADPAVA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNR-NSGSIHGSPSS-GRTKKIFVGGLASTVT 120
           E VI EKH IDGR VEAKKAVP+DDQNM+NR NS SI GSP   GRT+KIFVGGL S+VT
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVT 120

Query: 121 EADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEV 180
           E+DF+ YF+QFGT TDVVVMYDH+TQRPRGFGFITYDSEEAV++VL KTFHELNGKMVEV
Sbjct: 121 ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEV 180

Query: 181 KRAIPKELTPGPNRSPL-VGYNYGMSRASGFLNSYTQGYNMSPLGGYGVRADGRLSPIIS 240
           KRA+PKEL+PGP+RSPL  GY+YG++R +  LN Y QG+N + +GGYG+R DGR SP+ +
Sbjct: 181 KRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGA 240

Query: 241 SRTGVPHYGTANYGVGVNLEQGLRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYITPIGY 300
            R+G  +Y ++ YG+ VN +QGL  G+    N   +    + ++ YY GN+NR+   +GY
Sbjct: 241 GRSGFANY-SSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFGPAVGY 300

Query: 301 SGGNGRGDSP-LSSSTWNVWGN------GSMSTAMNSSGPGAFSGSGAGNLRVAYGNNDD 360
            GGNG G+S   SS T N+WGN       + +T  NS+     S SG   L   +GN+  
Sbjct: 301 EGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGV 360

Query: 361 NWSSAAVANHVGGNAP---GYTCGNNNGYAVGDNGFGFRGGYGRNGVVSSVATRKAFAET 420
           NW +    N+   N     GY     +G+ +G  G+  R   G N    S +   A A  
Sbjct: 361 NWGAPGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNP-GANKAAPSSSFSSASATN 420

Query: 421 TDGYERS-YRDLYRDEAVHDESTWQPTTPELDGSVSFGYGLGN--LASDDPAKSSE-NFL 477
             GY+ +   + Y + AV+ + TW+  TPE +G   F YG+G    +SD  A+SS   ++
Sbjct: 421 NTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSPGYV 480

[Close]

BLAST of Spg030541.1 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 431.4 bits (1108), Expect = 9.5e-121
Identity = 259/497 (52.11%), Postives = 329/497 (66.20%), Query Frame = 0


Query: 3   SDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVAER 62
           SDLGKLFIGGISWDTDEERL+EYFG YG++VEAVIMRDR TGRARGFGF+VFADP+VAER
Sbjct: 12  SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71

Query: 63  VILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIH-------GSPSSGRTKKIFVGGLAS 122
           VI++KH+IDGRTVEAKKAVP+DDQ +L R++  +H       G+    RTKKIFVGGL S
Sbjct: 72  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 131

Query: 123 TVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKM 182
           ++TEA+F+ YFDQFGTI DVVVMYDH+TQRPRGFGFIT+DSEE+VD VLHKTFHELNGKM
Sbjct: 132 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 191

Query: 183 VEVKRAIPKEL-TPGPNRSPLVGY--NYGM----SRASGFLNSYTQGYNMSPLGGYGVRA 242
           VEVKRA+PKEL +  PNRSPL+GY  NYG+    S A+ + NS+  GYN + LG     +
Sbjct: 192 VEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLG-----S 251

Query: 243 DGRLSPIISSRTGVPHYGTANYGVGVNLEQGLRQGY-GRTLNIMNSQAQEQMLNSYYNGN 302
            GR SPI S R        +++G+G+N E  L   + G TL            N Y+N  
Sbjct: 252 AGRFSPIGSGRNAF-----SSFGLGLNQELNLNSNFDGNTLGYSRIPG-----NQYFNSA 311

Query: 303 S-NRYITPIGYSGGNGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGAFSGSGAGNLRVAYG 362
           S NRY +PIGY+    RGDS  + S  ++WGN S     +SSGPG        NL V+ G
Sbjct: 312 SPNRYNSPIGYN----RGDSAYNPSNRDLWGNRS-----DSSGPG-------WNLGVSVG 371

Query: 363 NNDDNWSSAAVANHVGGNAPGYTCGNNNGYAVGDNGFGFRGGYGRNGVVSSVATRKAFAE 422
           NN  NW  ++V +            +NNGY     G  +  G G +G+        +FA 
Sbjct: 372 NNRGNWGLSSVVS------------DNNGY-----GRSYGAGSGLSGL--------SFAG 431

Query: 423 TTDGYERSYRDLYRDEAVHDESTWQPTTP------ELDG-SVSFGYGLGNLASDDPAKSS 477
            T+G++ S  +LYR  +V+ +STWQ + P      ELDG S S+G+G+ N+ SD  A +S
Sbjct: 432 NTNGFDGSIGELYRGSSVYSDSTWQQSMPHHQSSNELDGLSRSYGFGIDNVGSDPSANAS 452

[Close]

BLAST of Spg030541.1 vs. TAIR 10
Match: AT4G26650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 431.4 bits (1108), Expect = 9.5e-121
Identity = 259/497 (52.11%), Postives = 329/497 (66.20%), Query Frame = 0


Query: 3   SDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVAER 62
           SDLGKLFIGGISWDTDEERL+EYFG YG++VEAVIMRDR TGRARGFGF+VFADP+VAER
Sbjct: 9   SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 68

Query: 63  VILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIH-------GSPSSGRTKKIFVGGLAS 122
           VI++KH+IDGRTVEAKKAVP+DDQ +L R++  +H       G+    RTKKIFVGGL S
Sbjct: 69  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 128

Query: 123 TVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKM 182
           ++TEA+F+ YFDQFGTI DVVVMYDH+TQRPRGFGFIT+DSEE+VD VLHKTFHELNGKM
Sbjct: 129 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 188

Query: 183 VEVKRAIPKEL-TPGPNRSPLVGY--NYGM----SRASGFLNSYTQGYNMSPLGGYGVRA 242
           VEVKRA+PKEL +  PNRSPL+GY  NYG+    S A+ + NS+  GYN + LG     +
Sbjct: 189 VEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLG-----S 248

Query: 243 DGRLSPIISSRTGVPHYGTANYGVGVNLEQGLRQGY-GRTLNIMNSQAQEQMLNSYYNGN 302
            GR SPI S R        +++G+G+N E  L   + G TL            N Y+N  
Sbjct: 249 AGRFSPIGSGRNAF-----SSFGLGLNQELNLNSNFDGNTLGYSRIPG-----NQYFNSA 308

Query: 303 S-NRYITPIGYSGGNGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGAFSGSGAGNLRVAYG 362
           S NRY +PIGY+    RGDS  + S  ++WGN S     +SSGPG        NL V+ G
Sbjct: 309 SPNRYNSPIGYN----RGDSAYNPSNRDLWGNRS-----DSSGPG-------WNLGVSVG 368

Query: 363 NNDDNWSSAAVANHVGGNAPGYTCGNNNGYAVGDNGFGFRGGYGRNGVVSSVATRKAFAE 422
           NN  NW  ++V +            +NNGY     G  +  G G +G+        +FA 
Sbjct: 369 NNRGNWGLSSVVS------------DNNGY-----GRSYGAGSGLSGL--------SFAG 428

Query: 423 TTDGYERSYRDLYRDEAVHDESTWQPTTP------ELDG-SVSFGYGLGNLASDDPAKSS 477
            T+G++ S  +LYR  +V+ +STWQ + P      ELDG S S+G+G+ N+ SD  A +S
Sbjct: 429 NTNGFDGSIGELYRGSSVYSDSTWQQSMPHHQSSNELDGLSRSYGFGIDNVGSDPSANAS 449

[Close]

BLAST of Spg030541.1 vs. TAIR 10
Match: AT5G55550.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 399.8 bits (1026), Expect = 3.1e-111
Identity = 254/504 (50.40%), Postives = 324/504 (64.29%), Query Frame = 0


Query: 1   MESDLGKLFIGGISWDTDEERLREYFGNYGEVVEAVIMRDRATGRARGFGFVVFADPAVA 60
           MESDLGKLFIGGISWDTDEERLR+YF NYG+VVEAVIMRDRATGRARGFGF+VFADP V+
Sbjct: 1   MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60

Query: 61  ERVILEKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIH-GSP---SSGRTKKIFVGGLAST 120
           ERVI++KH+IDGRTVEAKKAVP+DDQ +L R++  IH  SP     GRTKKIFVGGL S+
Sbjct: 61  ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSS 120

Query: 121 VTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMV 180
           +TE +F+ YFDQFGTI DVVVMYDH+TQRPRGFGFIT+DS++AVDRVLHKTFHELNGK+V
Sbjct: 121 ITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLV 180

Query: 181 EVKRAIPKELTPGPN-RSPLV-GYNYG----MSRASGFLNSYTQG---YN-MSPLGGYGV 240
           EVKRA+PKE++P  N RSPL  G NYG       A+ + N++  G   YN + P+G    
Sbjct: 181 EVKRAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYNSLGPVG---- 240

Query: 241 RADGRLSPII-SSRTGVPHYGTA-NYGVGVNLEQGLRQGYGRTLNIMNSQAQEQMLNSYY 300
               R SP+I S R  V  +G   N+ + +NL      G   T       +     N Y+
Sbjct: 241 ---RRFSPVIGSGRNAVSAFGLGLNHDLSLNLNPSC-DGTSSTFGYNRIPS-----NPYF 300

Query: 301 NGNS-NRYITPIGYSGGNGRGDSPLSSSTWNVWGNGSMSTAMNSSGPGAFSGSGAGNLRV 360
           NG S NRY +PIG++    R +SP +S+  ++WGN +     +++GPG        NL V
Sbjct: 301 NGASPNRYTSPIGHN----RTESPYNSNNRDLWGNRT-----DTAGPG-------WNLNV 360

Query: 361 AYGNNDDNW---SSAAVANHVGGNAPGYTCGNNNGYAVGDNGFGFRGGYGRNGVVSSVAT 420
           + GNN  NW   SS+AV+N            +NN             G+GRN   SS  +
Sbjct: 361 SNGNNRGNWGLPSSSAVSN------------DNN-------------GFGRNYGTSSGLS 420

Query: 421 RKAFAETTDGYERSYRDLYRDEAVHDESTWQ------PTTPELDG-SVSFGYGLGNLASD 478
              F    +G+E S  +LYR  +V+ +STWQ       ++ ELD  S ++GY + N+ SD
Sbjct: 421 SSPF----NGFEGSIGELYRGGSVYSDSTWQQQQLPSQSSHELDNLSRAYGYDIDNVGSD 446

The following BLAST results are available for this feature:

BLAST of Spg030541.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904623.1	8.0e-263	95.40	heterogeneous nuclear ribonucleoprotein 1-like [Benincasa hispida] >XP_038904624...	[more]
XP_004149577.1	1.2e-255	93.32	heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN56055.1 hypothet...	[more]
XP_008449083.1	6.2e-255	92.69	PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo] >KAA0065786....	[more]
XP_022158863.1	1.3e-252	92.48	heterogeneous nuclear ribonucleoprotein 1-like [Momordica charantia] >XP_0221588...	[more]
KAG7028405.1	2.4e-243	89.79	Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Spg030541.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	2.2e-66	42.05	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
Q9C652	1.5e-46	47.74	RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1	[more]
Q9JII5	9.8e-46	38.57	DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2	[more]
Q98SJ2	2.2e-45	38.89	DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1	[more]
Q96EP5	3.7e-45	38.57	DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1	[more]

BLAST of Spg030541.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L293	6.0e-256	93.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G062570 PE=4 SV=1	[more]
A0A5A7VHF8	3.0e-255	92.69	Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BKM2	3.0e-255	92.69	heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC10349105...	[more]
A0A6J1DX93	6.2e-253	92.48	heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1KSZ8	2.9e-242	89.38	heterogeneous nuclear ribonucleoprotein 1-like isoform X1 OS=Cucurbita maxima OX...	[more]

BLAST of Spg030541.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07810.1	7.8e-131	53.54	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	1.0e-130	53.55	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	9.5e-121	52.11	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.2	9.5e-121	52.11	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G55550.3	3.1e-111	50.40	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 107..179 e-value: 4.7E-23 score: 92.6 coord: 7..78 e-value: 4.1E-24 score: 96.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 108..166 e-value: 4.0E-14 score: 52.2 coord: 8..74 e-value: 5.1E-16 score: 58.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..82 score: 18.052174
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 106..183 score: 17.421124
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 6..88 e-value: 2.4E-27 score: 97.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 103..189 e-value: 4.3E-26 score: 92.9
None	No IPR available	PANTHER	PTHR48032:SF2	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 1..478
None	No IPR available	PANTHER	PTHR48032	RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6	coord: 1..478
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 8..78 e-value: 1.64838E-39 score: 135.406
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 104..183 e-value: 1.36354E-49 score: 162.535
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..103
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 104..203

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg030541	Spg030541	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg030541.1-three_prime_utr	Spg030541.1-three_prime_utr-scaffold6:32139420..32140416	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg030541.1-cds	Spg030541.1-cds-scaffold6:32140417..32141652	CDS
Spg030541.1-cds	Spg030541.1-cds-scaffold6:32141883..32142104	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg030541.1-five_prime_utr	Spg030541.1-five_prime_utr-scaffold6:32142105..32142109	five_prime_UTR
Spg030541.1-five_prime_utr	Spg030541.1-five_prime_utr-scaffold6:32142323..32142438	five_prime_UTR
Spg030541.1-five_prime_utr	Spg030541.1-five_prime_utr-scaffold6:32142570..32143110	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg030541.1	Spg030541.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding