Spg030471.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg030471.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Eukaryotic translation initiation factor 3 subunit I
Location	scaffold6: 32409820 .. 32411000 (-)
Sequence length	990
RNA-Seq Expression	Spg030471.1
Synteny	Spg030471.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGCCTCTCCTGTAGTTCCTCCTACCATCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTGCATCTCCCAAAAATCCATCTCCTGAGGTATTTAAAGATGTCAATTTTCAGGAACGGATGGAGATCATGAAGAAAAGAGATTTCCTCAATGAGAAGGGATTCTCTAATAAAGCAGGAGCACTGCCAGAGTTCGTGAGTAGGATCATTTCGCAGTACAAATGGCAGGACTTCTGTGCTCACCCTCAGGAGGCTATTGTGTCTCTAGTTCTTGAATTTTATGCCAGCCTGAGGGAAGATGGTCAGTTTCTCCTCAGTCGACATTAATAGGGTGTACAGGATCAAGGCACCCCTGAATCCAAGAGGGAACGACGTTATTAGGAACTCTTCGGCCAAACAGATGAAAGATGCATTGAAGCTTGTGGCCAACAAGGGGGTTCAGTGGAAAGAATCACAGACGAAAGTGAAGTCTTTGGTGCCAAGCGATCTAAAGCCAGAATCGGCAGTTTGGCTTCACTTCATCAAAAACCGTTTGATGCCAACCACCCACGACAACACGATTTCAGTGGATAGAGTGATGCTACTCTATTGCATTATGAAGGGGTTGGAGATCAACGTAGGGAGCATAATAAGGGATGAAATTCTAGCCTGTGGGAGAAAAAGAGTAGGTAAGCTTTTCTTTGGATCACTCATCACCCAGCTCTGCCAAAGGGTGAAGATCGTTCCAGGCAAGGACGAGAAGCGTCACTTCTTCAAGACCGACCATTGACCTGTCCTTGATTGGAAAGCTCCAACAAAACAGTATCCAGAGAAAAGACAAAGCCTCTACATCTCAGGCTACTCCTCAATCAGGGCCGAATGTAGCTTCTCCATCCCAACACACTCCTTTCACAGGGCCTTCACCATCATCGGAAGCCCTAGCCATTGCCTACCGCCATGTAGATCAAATCAGGGAGAACATGAAAACATATTGGGCATATGCAAAAGAGAGGGATGAAGCCATTAGAGAGTTCTATCTCTCTACCGCCCCAAGTATTGCTCTGGTCTTTCCCAATTTCCCTCAGTCGCTGCTGCCTCAGGAAGACAAGGATTCTGATGAAGAGGACGATGAAGAGGATAATGAGAATGATGAAGAAGAGAATGAAGAGAAAGAGAGTTCCTCAGATGAGGACTAG

mRNA sequence

ATGGACGCCTCTCCTGTAGTTCCTCCTACCATCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTGCATCTCCCAAAAATCCATCTCCTGAGGTATTTAAAGATGTCAATTTTCAGGAACGGATGGAGATCATGAAGAAAAGAGATTTCCTCAATGAGAAGGGATTCTCTAATAAAGCAGGAGCACTGCCAGAGTTCGTGAGTAGGATCATTTCGCAGTACAAATGGCAGGACTTCTGTGCTCACCCTCAGGAGGCTATTGTGTCTCTAGTTCTTGAATTTTATGCCAGCCTGAGGGAAGATGGTCAGAACTCTTCGGCCAAACAGATGAAAGATGCATTGAAGCTTGTGGCCAACAAGGGGGTTCAGTGGAAAGAATCACAGACGAAAGTGAAGTCTTTGGTGCCAAGCGATCTAAAGCCAGAATCGGCAGTTTGGCTTCACTTCATCAAAAACCGTTTGATGCCAACCACCCACGACAACACGATTTCAGTGGATAGAGTGATGCTACTCTATTGCATTATGAAGGGATCGTTCCAGGCAAGGACGAGAAGCGTCACTTCTTCAAGACCGACCATTGACCTGTCCTTGATTGGAAAGCTCCAACAAAACAGTATCCAGAGAAAAGACAAAGCCTCTACATCTCAGGCTACTCCTCAATCAGGGCCGAATGTAGCTTCTCCATCCCAACACACTCCTTTCACAGGGCCTTCACCATCATCGGAAGCCCTAGCCATTGCCTACCGCCATGTAGATCAAATCAGGGAGAACATGAAAACATATTGGGCATATGCAAAAGAGAGGGATGAAGCCATTAGAGAGTTCTATCTCTCTACCGCCCCAAGTATTGCTCTGGTCTTTCCCAATTTCCCTCAGTCGCTGCTGCCTCAGGAAGACAAGGATTCTGATGAAGAGGACGATGAAGAGGATAATGAGAATGATGAAGAAGAGAATGAAGAGAAAGAGAGTTCCTCAGATGAGGACTAG

Coding sequence (CDS)

ATGGACGCCTCTCCTGTAGTTCCTCCTACCATCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTGCATCTCCCAAAAATCCATCTCCTGAGGTATTTAAAGATGTCAATTTTCAGGAACGGATGGAGATCATGAAGAAAAGAGATTTCCTCAATGAGAAGGGATTCTCTAATAAAGCAGGAGCACTGCCAGAGTTCGTGAGTAGGATCATTTCGCAGTACAAATGGCAGGACTTCTGTGCTCACCCTCAGGAGGCTATTGTGTCTCTAGTTCTTGAATTTTATGCCAGCCTGAGGGAAGATGGTCAGAACTCTTCGGCCAAACAGATGAAAGATGCATTGAAGCTTGTGGCCAACAAGGGGGTTCAGTGGAAAGAATCACAGACGAAAGTGAAGTCTTTGGTGCCAAGCGATCTAAAGCCAGAATCGGCAGTTTGGCTTCACTTCATCAAAAACCGTTTGATGCCAACCACCCACGACAACACGATTTCAGTGGATAGAGTGATGCTACTCTATTGCATTATGAAGGGATCGTTCCAGGCAAGGACGAGAAGCGTCACTTCTTCAAGACCGACCATTGACCTGTCCTTGATTGGAAAGCTCCAACAAAACAGTATCCAGAGAAAAGACAAAGCCTCTACATCTCAGGCTACTCCTCAATCAGGGCCGAATGTAGCTTCTCCATCCCAACACACTCCTTTCACAGGGCCTTCACCATCATCGGAAGCCCTAGCCATTGCCTACCGCCATGTAGATCAAATCAGGGAGAACATGAAAACATATTGGGCATATGCAAAAGAGAGGGATGAAGCCATTAGAGAGTTCTATCTCTCTACCGCCCCAAGTATTGCTCTGGTCTTTCCCAATTTCCCTCAGTCGCTGCTGCCTCAGGAAGACAAGGATTCTGATGAAGAGGACGATGAAGAGGATAATGAGAATGATGAAGAAGAGAATGAAGAGAAAGAGAGTTCCTCAGATGAGGACTAG

Protein sequence

MDASPVVPPTISPAKPKGKSPKAASPKNPSPEVFKDVNFQERMEIMKKRDFLNEKGFSNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQNSSAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGSFQARTRSVTSSRPTIDLSLIGKLQQNSIQRKDKASTSQATPQSGPNVASPSQHTPFTGPSPSSEALAIAYRHVDQIRENMKTYWAYAKERDEAIREFYLSTAPSIALVFPNFPQSLLPQEDKDSDEEDDEEDNENDEEENEEKESSSDED

Homology

[Close]

BLAST of Spg030471.1 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 95.1 bits (235), Expect = 1.2e-15
Identity = 96/354 (27.12%), Postives = 151/354 (42.66%), Query Frame = 0


Query: 46  MKKRDFLNEKGF----SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLRE 105
           ++ R    EKGF    S   G LP F++++I+Q+ W+ FCAHP++ IV LV EFYA+L +
Sbjct: 38  IQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTD 97

Query: 106 DG-----------------------------------QNSSAKQMKDALKLVANKGVQWK 165
                                                QN + + +   L+ VA  G +W 
Sbjct: 98  PEENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIQNITQQDLITVLETVAAAGAEWN 157

Query: 166 ESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGSFQARTRS 225
            S     + + S L P + VW HF+K+RL+PTTH  T+S DR++LL+ ++ G      R 
Sbjct: 158 VSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRM 217

Query: 226 VTS------SRPTIDL---SLIGKLQQNS-----IQRKDKASTSQATPQSGPNVASPSQH 285
           + S      +R T  L   SLI +L +N+     +  +   +T +    +   +A     
Sbjct: 218 IHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPT 277

Query: 286 TPFTGPSPSSEALAIAYRHVDQIRENMKT----------------------------YWA 319
                PS S  A A + R    I + +K                             +WA
Sbjct: 278 ESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWA 337

[Close]

BLAST of Spg030471.1 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 92.4 bits (228), Expect = 7.6e-15
Identity = 54/172 (31.40%), Postives = 85/172 (49.42%), Query Frame = 0


Query: 46  MKKRDFLNEKGF----SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLRE 105
           ++ R    EKGF    S   G LP F++++I+Q+ W+ FCAHP++ IV LV EFYA+L +
Sbjct: 29  IQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTD 88

Query: 106 DGQNS-----------------------------------SAKQMKDALKLVANKGVQWK 165
             +N+                                   +   +   L+ VA  G +W 
Sbjct: 89  PVENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEHDLITVLETVAVAGAEWN 148

Query: 166 ESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG 179
            S     + + S L P + VW HF+K+ L+PTTH  T+S DR++LL+ ++ G
Sbjct: 149 VSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIG 199

[Close]

BLAST of Spg030471.1 vs. NCBI nr
Match: EXB49850.1 (hypothetical protein L484_000844 [Morus notabilis])

HSP 1 Score: 86.3 bits (212), Expect = 5.5e-13
Identity = 60/200 (30.00%), Postives = 91/200 (45.50%), Query Frame = 0


Query: 23  AASPKNPSPEVFKDVNFQERM------EIMKKRDFLNEKGF---SNKAGALPEFVSRIIS 82
           AA P + + +V  +  F +        E +  R+ + EKGF    +     P F+S +I 
Sbjct: 25  AADPSSSTRQVSANRKFVDNAAEKRYEENIWARNLVKEKGFLLHDSPTLGQPGFISDVII 84

Query: 83  QYKWQDFCAHPQEAIVSLVLEFYASLREDGQN---------------------------- 142
              WQ FC HP + IV LV EFYA+L+  GQN                            
Sbjct: 85  SRGWQIFCRHPIDPIVPLVKEFYANLQNQGQNTVFVWEIDITFTSNYINGVLGIPNQDDE 144

Query: 143 -------SSAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPT 179
                  +  +Q+K+ LK +A  G QW  S     +    +L+P + VW HF+ +RL+ +
Sbjct: 145 FVELITDAIEEQLKEVLKTIAILGAQWLLSAKGSYTCNRHELQPAAKVWYHFLASRLLLS 204

[Close]

BLAST of Spg030471.1 vs. NCBI nr
Match: EXB53755.1 (hypothetical protein L484_022412 [Morus notabilis])

HSP 1 Score: 84.7 bits (208), Expect = 1.6e-12
Identity = 46/149 (30.87%), Postives = 71/149 (47.65%), Query Frame = 0


Query: 65  PEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQNS------------------ 124
           P F++R+I Q+ W+ FC HP   IV LV EFYA+L +  Q +                  
Sbjct: 4   PAFITRVIHQHGWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSI 63

Query: 125 -----------------SAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLH 179
                            + +Q++  L  VA +G  W+ S     + +  +LK  + +W H
Sbjct: 64  FGLEEVVDEYVDFASEVTDEQLEVVLAEVAIEGATWQISPQGAYTCIRKELKRHAQIWYH 123

[Close]

BLAST of Spg030471.1 vs. NCBI nr
Match: PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii])

HSP 1 Score: 84.0 bits (206), Expect = 2.7e-12
Identity = 54/192 (28.12%), Postives = 92/192 (47.92%), Query Frame = 0


Query: 22  KAASPKNPSPEVFKDVNFQERMEIMKKRDFLNEKGFSNKAGALPEFVSRIISQYKWQDFC 81
           KA   ++ + E+  + N Q R  +  +++F+ +   ++K    P F++ +I Q+ WQ FC
Sbjct: 42  KAVKFESKAAEIRYEENIQNR-PLSVEKEFVWD---NSKPLEQPPFIADVIIQHNWQLFC 101

Query: 82  AHPQEAIVSLVLEFYASL-----------------------------------REDGQNS 141
           AHP++ IV LV EFY ++                                    E  ++ 
Sbjct: 102 AHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTIFSLGDPIDEHSEFVEDI 161

Query: 142 SAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISV 179
           +  ++   L+ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH  T+S 
Sbjct: 162 TKPELVIVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSK 221

[Close]

BLAST of Spg030471.1 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.7e-16
Identity = 96/354 (27.12%), Postives = 151/354 (42.66%), Query Frame = 0


Query: 46  MKKRDFLNEKGF----SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLRE 105
           ++ R    EKGF    S   G LP F++++I+Q+ W+ FCAHP++ IV LV EFYA+L +
Sbjct: 38  IQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTD 97

Query: 106 DG-----------------------------------QNSSAKQMKDALKLVANKGVQWK 165
                                                QN + + +   L+ VA  G +W 
Sbjct: 98  PEENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIQNITQQDLITVLETVAAAGAEWN 157

Query: 166 ESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGSFQARTRS 225
            S     + + S L P + VW HF+K+RL+PTTH  T+S DR++LL+ ++ G      R 
Sbjct: 158 VSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRM 217

Query: 226 VTS------SRPTIDL---SLIGKLQQNS-----IQRKDKASTSQATPQSGPNVASPSQH 285
           + S      +R T  L   SLI +L +N+     +  +   +T +    +   +A     
Sbjct: 218 IHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPT 277

Query: 286 TPFTGPSPSSEALAIAYRHVDQIRENMKT----------------------------YWA 319
                PS S  A A + R    I + +K                             +WA
Sbjct: 278 ESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFWA 337

[Close]

BLAST of Spg030471.1 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.7e-15
Identity = 54/172 (31.40%), Postives = 85/172 (49.42%), Query Frame = 0


Query: 46  MKKRDFLNEKGF----SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLRE 105
           ++ R    EKGF    S   G LP F++++I+Q+ W+ FCAHP++ IV LV EFYA+L +
Sbjct: 29  IQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTD 88

Query: 106 DGQNS-----------------------------------SAKQMKDALKLVANKGVQWK 165
             +N+                                   +   +   L+ VA  G +W 
Sbjct: 89  PVENTVYVRGVQVSWSEEAINAVFGLGDPVDEHSEFIENITEHDLITVLETVAVAGAEWN 148

Query: 166 ESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG 179
            S     + + S L P + VW HF+K+ L+PTTH  T+S DR++LL+ ++ G
Sbjct: 149 VSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIG 199

[Close]

BLAST of Spg030471.1 vs. ExPASy TrEMBL
Match: W9RBS1 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000844 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.7e-13
Identity = 60/200 (30.00%), Postives = 91/200 (45.50%), Query Frame = 0


Query: 23  AASPKNPSPEVFKDVNFQERM------EIMKKRDFLNEKGF---SNKAGALPEFVSRIIS 82
           AA P + + +V  +  F +        E +  R+ + EKGF    +     P F+S +I 
Sbjct: 25  AADPSSSTRQVSANRKFVDNAAEKRYEENIWARNLVKEKGFLLHDSPTLGQPGFISDVII 84

Query: 83  QYKWQDFCAHPQEAIVSLVLEFYASLREDGQN---------------------------- 142
              WQ FC HP + IV LV EFYA+L+  GQN                            
Sbjct: 85  SRGWQIFCRHPIDPIVPLVKEFYANLQNQGQNTVFVWEIDITFTSNYINGVLGIPNQDDE 144

Query: 143 -------SSAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPT 179
                  +  +Q+K+ LK +A  G QW  S     +    +L+P + VW HF+ +RL+ +
Sbjct: 145 FVELITDAIEEQLKEVLKTIAILGAQWLLSAKGSYTCNRHELQPAAKVWYHFLASRLLLS 204

[Close]

BLAST of Spg030471.1 vs. ExPASy TrEMBL
Match: W9QTD9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 7.7e-13
Identity = 46/149 (30.87%), Postives = 71/149 (47.65%), Query Frame = 0


Query: 65  PEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQNS------------------ 124
           P F++R+I Q+ W+ FC HP   IV LV EFYA+L +  Q +                  
Sbjct: 4   PAFITRVIHQHGWRQFCQHPSNPIVPLVREFYANLLDFNQETVFVQNVKVPFTARAINSI 63

Query: 125 -----------------SAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLH 179
                            + +Q++  L  VA +G  W+ S     + +  +LK  + +W H
Sbjct: 64  FGLEEVVDEYVDFASEVTDEQLEVVLAEVAIEGATWQISPQGAYTCIRKELKRHAQIWYH 123

[Close]

BLAST of Spg030471.1 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-12
Identity = 54/192 (28.12%), Postives = 92/192 (47.92%), Query Frame = 0


Query: 22  KAASPKNPSPEVFKDVNFQERMEIMKKRDFLNEKGFSNKAGALPEFVSRIISQYKWQDFC 81
           KA   ++ + E+  + N Q R  +  +++F+ +   ++K    P F++ +I Q+ WQ FC
Sbjct: 42  KAVKFESKAAEIRYEENIQNR-PLSVEKEFVWD---NSKPLEQPPFIADVIIQHNWQLFC 101

Query: 82  AHPQEAIVSLVLEFYASL-----------------------------------REDGQNS 141
           AHP++ IV LV EFY ++                                    E  ++ 
Sbjct: 102 AHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTIFSLGDPIDEHSEFVEDI 161

Query: 142 SAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISV 179
           +  ++   L+ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH  T+S 
Sbjct: 162 TKPELVIVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSK 221

The following BLAST results are available for this feature:

BLAST of Spg030471.1 vs. NCBI nr


Match Name	E-value	Identity	Description
PON46472.1	1.2e-15	27.12	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
PON35554.1	7.6e-15	31.40	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
EXB49850.1	5.5e-13	30.00	hypothetical protein L484_000844 [Morus notabilis]	[more]
EXB53755.1	1.6e-12	30.87	hypothetical protein L484_022412 [Morus notabilis]	[more]
PON70375.1	2.7e-12	28.13	hypothetical protein PanWU01x14_080440 [Parasponia andersonii]	[more]

BLAST of Spg030471.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg030471.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5BCG4	5.7e-16	27.12	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5AGA5	3.7e-15	31.40	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
W9RBS1	2.7e-13	30.00	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000844 PE=4 SV=1	[more]
W9QTD9	7.7e-13	30.87	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1	[more]
A0A2P5DAQ2	1.3e-12	28.13	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE...	[more]

BLAST of Spg030471.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 303..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 291..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..329

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg030471	Spg030471	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg030471.1-cds	Spg030471.1-cds-scaffold6:32409820..32410276	CDS
Spg030471.1-cds	Spg030471.1-cds-scaffold6:32410392..32410613	CDS
Spg030471.1-cds	Spg030471.1-cds-scaffold6:32410690..32411000	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg030471.1	Spg030471.1-protein	polypeptide