Spg026075.1 (mRNA) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACAAAGTGAAACTCTTTCCTTTTTGTAAAGATAAACTTCCTAAGCTTTAAAAAAAAAAACCTTGGATTCGAACTAAATAACCTTAATTTCGGTTAATTTTTGGAGTGGCGAACTAAGGTTAAACATAACAGTAGCTACTTTAAAGGACTCATAATTCCAACTTCTTTTTATGGCAATTAAGCTTTTAATCAAAGTCCAATTTAATTACTCTCACAATCATGACTCATCAGTTGCTTTTGAATTACGCTAAAAAAAAAAAAAGTATTAACCCCAAAAAAACGGGTGTAGGGATCAAGTTCTGAATAAAGTTTCTAATAATTTAATCCCCTAATTTCTTCATTATCCCATTTGCCAGCCTGCTCTCTCTTTTGTGGAATCTCCTGAGAAATTCCAATATTTTTCATTTTTTTTCCTCTAATTATGCTCAAGAAGACATCGAAAATAAAGAATTAATTGAAATTAAAATGTCAAATTGAAGAAAACAGCTGGCTTTGGCGAAGAGGATCAATTGAAGCTGATGGGGACCTACTGTTTCATGACGAGCACGTTCGTTAATAAGCCCCCACAAAAAATAAATAATAAATTTAAAATAAAAAGGAAACCAAACCAACTGAAATGATTACAAAAGCAAACAAAAACAAAAAAAAACAAAAAAAAAAAAAAAAAGAAAAGAAAAAAGAAAAAGAAGAAACTCACAATCACAATATCTCTTTACCGACAAATAGAAATCTGTTCGATCAGAGTCGAATTCTAACGAAAACGAAAGCCTTTTCATCTTCTTCTTCTGTCTTCAGCAAATCCCATCTCCAGAAATGGGGAAAACCGGGGCGAAATTGCCGAGTTTCTGCCTGAACCGGATCCGGCCTCACGTTCGAGTGCCTATTCAGTCCAAACCGGACTCTGTTTCTGTGAAAACCGGCCAGAAGAAGGCTGATGATTTCGAAGCGAAGAAATGTGATGACAATAAAACGTTGGGAATTGGAAGGAAGATCATGATTGTGGTTGATTCCAGCTTTGAAGCTGAAGGAGCTCTGCAATGGGCGCTCTCACACACTGTTCAGAATCAAGACAAGATTCTTCTTCTCCATGTCACCAAACCTTCAAAAAGAGGTCCAAATCTTCCATCCACATTGATTCATTTACTTAGAATTTTAAGAATTGGGTTGATTTCATGAACTTTTGTTACAGGGGAAGGCCCCAGCAAGGAGACGGCTCCAAGAGCATTTGAAGTGGTTCACTCCATGAGAAATTTATGTCAACTGAAGAGACCCGAGGTAAATTAGATGGGATTTTGAGCAAATGGGGTGGATTAAAACAGGATTTTTAATGATGGGTTATGAAAATTTTGATTGTTTATTAGGTGGAAATCGAGGTTGCAGTGGTGGAAGGGAAAGAGAAAGGGCCAGTGATAGTGGAAGAAGCGAGGAAGCAAGGGGCGTCGTTGCTGGTTTTGGGGCAGAAGAAACGGTCGACGACGTGGCGGCTTCTGATGGTGTGGGCCGGCCACCGGTTTGGCGGCGGCGGCGGCGGTGGCGCGGTGGAGTATTGTATTCAGAATGCGAACTGCATGGCGATTGCAGTGAGGAGGAAGAGCAAGAAATTGGGTGGCTATTTGATTACAACGAAGCGTCAAAAGGATTTCTGGCTTTTGGCTTAATTAGAATTAGAATTAGAAACAAGAATTTGGTTTGAATCAAAATGTTTGTGGTTTGAGAGATGTAATGTAAATAATGTAATTGAGAATTGTGAATTGTAAGTGATTTAGATTTTTTTTTTGGGGGTTTGGAAAAAAGTGATGAATATGTGGGGCTTGAATGTTGGGTAGAGTGGCACTCATGAAGGCTCCAAAAGGTGTATGGGTGGGCAGGGCATGTGTCTGAAACTGTTGGAATGTGATCATTTGGGAATCCCTATATGGCTTGAGGCAACTTTGACTGTACAACAGTTTCCCTCTAATTTATAATTTCTTGACAGATTGATTTGG ATGGGGAAAACCGGGGCGAAATTGCCGAGTTTCTGCCTGAACCGGATCCGGCCTCACGTTCGAGTGCCTATTCAGTCCAAACCGGACTCTGTTTCTGTGAAAACCGGCCAGAAGAAGGCTGATGATTTCGAAGCGAAGAAATGTGATGACAATAAAACGTTGGGAATTGGAAGGAAGATCATGATTGTGGTTGATTCCAGCTTTGAAGCTGAAGGAGCTCTGCAATGGGCGCTCTCACACACTGTTCAGAATCAAGACAAGATTCTTCTTCTCCATGTCACCAAACCTTCAAAAAGAGGGGAAGGCCCCAGCAAGGAGACGGCTCCAAGAGCATTTGAAGTGGTTCACTCCATGAGAAATTTATGTCAACTGAAGAGACCCGAGGTGGAAATCGAGGTTGCAGTGGTGGAAGGGAAAGAGAAAGGGCCAGTGATAGTGGAAGAAGCGAGGAAGCAAGGGGCGTCGTTGCTGGTTTTGGGGCAGAAGAAACGGTCGACGACGTGGCGGCTTCTGATGGTGTGGGCCGGCCACCGGTTTGGCGGCGGCGGCGGCGGTGGCGCGGTGGAGTATTGTATTCAGAATGCGAACTGCATGGCGATTGCAGTGAGGAGGAAGAGCAAGAAATTGGGTGGCTATTTGATTACAACGAAGCGTCAAAAGGATTTCTGGCTTTTGGCTTAA ATGGGGAAAACCGGGGCGAAATTGCCGAGTTTCTGCCTGAACCGGATCCGGCCTCACGTTCGAGTGCCTATTCAGTCCAAACCGGACTCTGTTTCTGTGAAAACCGGCCAGAAGAAGGCTGATGATTTCGAAGCGAAGAAATGTGATGACAATAAAACGTTGGGAATTGGAAGGAAGATCATGATTGTGGTTGATTCCAGCTTTGAAGCTGAAGGAGCTCTGCAATGGGCGCTCTCACACACTGTTCAGAATCAAGACAAGATTCTTCTTCTCCATGTCACCAAACCTTCAAAAAGAGGGGAAGGCCCCAGCAAGGAGACGGCTCCAAGAGCATTTGAAGTGGTTCACTCCATGAGAAATTTATGTCAACTGAAGAGACCCGAGGTGGAAATCGAGGTTGCAGTGGTGGAAGGGAAAGAGAAAGGGCCAGTGATAGTGGAAGAAGCGAGGAAGCAAGGGGCGTCGTTGCTGGTTTTGGGGCAGAAGAAACGGTCGACGACGTGGCGGCTTCTGATGGTGTGGGCCGGCCACCGGTTTGGCGGCGGCGGCGGCGGTGGCGCGGTGGAGTATTGTATTCAGAATGCGAACTGCATGGCGATTGCAGTGAGGAGGAAGAGCAAGAAATTGGGTGGCTATTTGATTACAACGAAGCGTCAAAAGGATTTCTGGCTTTTGGCTTAA MGKTGAKLPSFCLNRIRPHVRVPIQSKPDSVSVKTGQKKADDFEAKKCDDNKTLGIGRKIMIVVDSSFEAEGALQWALSHTVQNQDKILLLHVTKPSKRGEGPSKETAPRAFEVVHSMRNLCQLKRPEVEIEVAVVEGKEKGPVIVEEARKQGASLLVLGQKKRSTTWRLLMVWAGHRFGGGGGGGAVEYCIQNANCMAIAVRRKSKKLGGYLITTKRQKDFWLLA Homology
BLAST of Spg026075.1 vs. NCBI nr
Match: XP_022945318.1 (uncharacterized protein LOC111449594 [Cucurbita moschata]) HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101 Identity = 193/228 (84.65%), Postives = 207/228 (90.79%), Query Frame = 0
BLAST of Spg026075.1 vs. NCBI nr
Match: XP_023542429.1 (uncharacterized protein LOC111802335 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101 Identity = 194/229 (84.72%), Postives = 207/229 (90.39%), Query Frame = 0
BLAST of Spg026075.1 vs. NCBI nr
Match: KAG6601483.1 (hypothetical protein SDJN03_06716, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 379.0 bits (972), Expect = 2.8e-101 Identity = 197/231 (85.28%), Postives = 208/231 (90.04%), Query Frame = 0
BLAST of Spg026075.1 vs. NCBI nr
Match: KAG7032262.1 (hypothetical protein SDJN02_06306 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 379.0 bits (972), Expect = 2.8e-101 Identity = 197/231 (85.28%), Postives = 208/231 (90.04%), Query Frame = 0
BLAST of Spg026075.1 vs. NCBI nr
Match: XP_022956495.1 (uncharacterized protein LOC111458216 [Cucurbita moschata]) HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100 Identity = 196/232 (84.48%), Postives = 207/232 (89.22%), Query Frame = 0
BLAST of Spg026075.1 vs. ExPASy Swiss-Prot
Match: Q8VYN9 (Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 3.9e-05 Identity = 45/189 (23.81%), Postives = 81/189 (42.86%), Query Frame = 0
BLAST of Spg026075.1 vs. ExPASy TrEMBL
Match: A0A6J1G0H0 (uncharacterized protein LOC111449594 OS=Cucurbita moschata OX=3662 GN=LOC111449594 PE=4 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 6.1e-102 Identity = 193/228 (84.65%), Postives = 207/228 (90.79%), Query Frame = 0
BLAST of Spg026075.1 vs. ExPASy TrEMBL
Match: A0A6J1GXX9 (uncharacterized protein LOC111458216 OS=Cucurbita moschata OX=3662 GN=LOC111458216 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 5.2e-101 Identity = 196/232 (84.48%), Postives = 207/232 (89.22%), Query Frame = 0
BLAST of Spg026075.1 vs. ExPASy TrEMBL
Match: A0A6J1IT49 (uncharacterized protein LOC111478423 OS=Cucurbita maxima OX=3661 GN=LOC111478423 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.2e-100 Identity = 195/231 (84.42%), Postives = 207/231 (89.61%), Query Frame = 0
BLAST of Spg026075.1 vs. ExPASy TrEMBL
Match: A0A6J1HXT3 (universal stress protein PHOS32-like OS=Cucurbita maxima OX=3661 GN=LOC111467624 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 1.7e-99 Identity = 193/230 (83.91%), Postives = 204/230 (88.70%), Query Frame = 0
BLAST of Spg026075.1 vs. ExPASy TrEMBL
Match: A0A5A7SU40 (Usp domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00200 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 4.1e-98 Identity = 192/235 (81.70%), Postives = 202/235 (85.96%), Query Frame = 0
BLAST of Spg026075.1 vs. TAIR 10
Match: AT1G69080.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 189.5 bits (480), Expect = 2.9e-48 Identity = 117/248 (47.18%), Postives = 149/248 (60.08%), Query Frame = 0
BLAST of Spg026075.1 vs. TAIR 10
Match: AT2G03720.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 185.7 bits (470), Expect = 4.2e-47 Identity = 95/169 (56.21%), Postives = 125/169 (73.96%), Query Frame = 0
BLAST of Spg026075.1 vs. TAIR 10
Match: AT5G17390.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 179.1 bits (453), Expect = 4.0e-45 Identity = 90/204 (44.12%), Postives = 138/204 (67.65%), Query Frame = 0
BLAST of Spg026075.1 vs. TAIR 10
Match: AT3G03290.1 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 174.9 bits (442), Expect = 7.5e-44 Identity = 82/172 (47.67%), Postives = 125/172 (72.67%), Query Frame = 0
BLAST of Spg026075.1 vs. TAIR 10
Match: AT1G69080.2 (Adenine nucleotide alpha hydrolases-like superfamily protein ) HSP 1 Score: 164.9 bits (416), Expect = 7.8e-41 Identity = 108/238 (45.38%), Postives = 136/238 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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