Spg025419.1 (mRNA) Sponge gourd (cylindrica) v1

Overview


Name	Spg025419.1
Type	mRNA
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold13: 40431885 .. 40434571 (+)
Sequence length	1113
RNA-Seq Expression	Spg025419.1
Synteny	Spg025419.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGTCGATTTTTGTGGTCTCTAGGATAATAGAAGTCGCAGAGGCTACTGGCGACGGTGAGCGAGGCAAAGAAAAAATGTTGCCTCTGAGCCAATCTCCGGCCGGAGTTTTACCGGCGAGAAGGTTCTCCCTCTCCACTCTCCCCTCTCTCAAATTCTCTAACCCTAATCCTTTTCGACGCTCTAAATTTATTCCCAGAAGAAATCCTGCGAAACCCCTTAACATCACTCTCTCTAAAGCCGAAGGAACCGTCGATTCGACCAAACAGGCTCTCCCCAACTCTCCAAGTCCGCCTCCTTTTCCCACTGACCAGACGGTTTTCGTCGGCGATGAGAATGTTCCATTTGAAGGTGTAATTCAGTTTGATAAGCCCGATAGGTCTTCTCGTTTGAGCAAATGGGGGTAATTTTGACGATCCATTCGATTGATAAATTTGTTGTGAATTTGGCTTATTCTTCTGTGGTTCTTTGTTTCTTCAGCCGTGTGGCTATGCTTGCTGGTGGAGACGTATTGGCCTTGCTTTTGTTCTCCTCAATTGGACGATTCAGCCATGGTTTCCCTGTTTTTGATTTCGAGACTTTGCGCACGGCTGACCCTTTTATTGCCGGTACGCTTTCTTCTCTGCCACAATTTGCAGTTGAATCTTTGGTGTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTGGCTCGGTGAATCATTGATAGTGGATTGTTATAGGTTGGTTTCTGAGTGCTTACTTTCTCGGAGGTTATGGAGAGGATGGACGTGGTATAAATGGTTATTCCAAGGCTGTTATTGCCGCTTCTAAATCATGGGCTTTGGGAATTCCAGTAAGTTTATTGGCCTTATTGTGTTTGTTCTTCAATGCATCTTAGTTCTGAATTCGAAATTTGAACTGGTTTTGGTTTTGTTACTAGACTGAAGTGGAATTCTTGTTGGATTAGTTAGCTTCAATCCTTATCTGAGTAAGGCTAGAGCTTTTTGGCTTTGCCAAATACTTTTATCACGGAAAAAATGGAATTCCCTTCAAAGTTTTCATGATCAGTAGTAGTACTGCATTGGAAAAAGTTGAAAGTACCTTGCAATATGCTCTGTGAGAAAACAATTGTAGGGTGTTTTAAAGTCAATATAATGTGCTTTAGAAAAATTAGAAGTACTTTAAAATGTTTAGCAAGAAAGTATTTGTAAAGTGTTTTTGACCCATGCAATTGATGGGAAACACTTAAGCCACTTTTCAGAATATAAAAACAAGCATCAATGTAATTTAACATTATACACTTTGTACTAAAATACTTGTGATTAAAGTACTTTTGTTAAAAGTTGCACTCCCAAACATACACTCTAATACTTAGACAAAGGCTTCAGTTGCTGAAAAGTAATGGTTTCCTTCCTCCATTTTGAAAACTAAAGGATGGTGTTGGATTGTTCACATGCAAATACCGTTGAACAAAGACCACTATCATAAAATGATTCTTGTTTATTAATCATGATATTCATTTGATCTTAGGTTGTGCATATGGAGATGGATCTTAACTCATTATAGATAATGATATCATGATGAATGTATCCTGATCATCTTATGGATTCCAAAGTCTGGACATTATAGATAGATCTTGGATCTTATCATCTGCATGAAAGATCACTTTTCTTTGTATGCATCCTGCAGCTGGGTCTGATAATACGGGCAGCAACGTCTGGCCATATTCCGCCATATAATTTCATAGGAGTAACAATGGGAAGCACGTCTGTCTTGCTCATTGGATGGAGAGCAATACTGTATAAAGTTTTTCCAGTCAATAACAGCAAGAAGAACGATGTATATCGGCGTGGCAACCCATTTGAACTATTTGAGGTGCAGAAGCTTCTTCTCTATCAACATCCAAAATTTTCAGTGACTATCAATGCCATTCCTTACCATGAATGCTTCTTTGCAAACTCGTTATTTTCTATCTTGAACTTGATATTAAACTGGTCTTATGTGATGAGTTGGGTCGTCACACTCACAGTCGAACTGCATTTCAGTAAAATGTTAGTTGGCTTAGGATTCAGTTAATGACAAATCTCCAAAAATATTTAACTGGATTAAGACAGTAAAACGTTCTTGGAGAAAAGGCCTCATTTTCATTCCCTTCTGCAATGTGCATTCTTATTTCACTTGTTTACTCTTGGTGTTTTCTCATCCATGGCAATTGCTTTTGGTTACTTAATCCTAACAGACAAATTATCTCTATAAATCTGGTGCAGTTGTTGACATCATTGGTGAGAAGATGGTGATGATGGACAAACATCCTCCATTTGCTTGTATCATATTTTTCTTTAAGGGGACCTTATAAACTAACTGGTAAGTGTCCTACTTAAAATCAAAATGTGTATTTCTCTAATCCAAGTTTTGTTGATTTATGTATCTTCTGAAGTTCGATAATCAATAGTGAGTTATGTTGGTTGTCTAACAAAATGTTTAGATTACTCATTTCTCTTAAGGCCGATAATTTGTCTGATTGTCTCATATTTAGTTCTAAAAATATAAATTCATGATTGGAAGATAATAAGGATGAAAAGTATAAATTATAAATAGATGTGAGGTAGAATGAAATAGGCAAGTGTCTGGATGAGCCCTTTAGTTGGATTACTGGTGAATATAATTTTGGAGTAGTTGTGAGAGTGACGGATGAATTTTAAGATGAATGGCC

mRNA sequence

CCGTCGATTTTTGTGGTCTCTAGGATAATAGAAGTCGCAGAGGCTACTGGCGACGGTGAGCGAGGCAAAGAAAAAATGTTGCCTCTGAGCCAATCTCCGGCCGGAGTTTTACCGGCGAGAAGGTTCTCCCTCTCCACTCTCCCCTCTCTCAAATTCTCTAACCCTAATCCTTTTCGACGCTCTAAATTTATTCCCAGAAGAAATCCTGCGAAACCCCTTAACATCACTCTCTCTAAAGCCGAAGGAACCGTCGATTCGACCAAACAGGCTCTCCCCAACTCTCCAAGTCCGCCTCCTTTTCCCACTGACCAGACGGTTTTCGTCGGCGATGAGAATGTTCCATTTGAAGGTGTAATTCAGTTTGATAAGCCCGATAGGTCTTCTCGTTTGAGCAAATGGGGCCGTGTGGCTATGCTTGCTGGTGGAGACGTATTGGCCTTGCTTTTGTTCTCCTCAATTGGACGATTCAGCCATGGTTTCCCTGTTTTTGATTTCGAGACTTTGCGCACGGCTGACCCTTTTATTGCCGGTTGGTTTCTGAGTGCTTACTTTCTCGGAGGTTATGGAGAGGATGGACGTGGTATAAATGGTTATTCCAAGGCTGTTATTGCCGCTTCTAAATCATGGGCTTTGGGAATTCCACTGGGTCTGATAATACGGGCAGCAACGTCTGGCCATATTCCGCCATATAATTTCATAGGAGTAACAATGGGAAGCACGTCTGTCTTGCTCATTGGATGGAGAGCAATACTGTATAAAGTTTTTCCAGTCAATAACAGCAAGAAGAACGATGTATATCGGCGTGGCAACCCATTTGAACTATTTGAGGTGCAGAAGCTTCTTCTCTATCAACATCCAAAATTTTCAGTGACTATCAATGCCATTCCTTACCATGAATGCTTCTTTGCAAACTCGTTATTTTCTATCTTGAACTTGATATTAAACTGGTCTTATGTGATGAGTTGGGTCGTCACACTCACAGTCGAACTGCATTTCAGTAAAATGTTAGTTGGCTTAGGATTCATTGTTGACATCATTGGTGAGAAGATGGTGATGATGGACAAACATCCTCCATTTGCTTGTATCATATTTTTCTTTAAGGGGACCTTATAA

Coding sequence (CDS)

CCGTCGATTTTTGTGGTCTCTAGGATAATAGAAGTCGCAGAGGCTACTGGCGACGGTGAGCGAGGCAAAGAAAAAATGTTGCCTCTGAGCCAATCTCCGGCCGGAGTTTTACCGGCGAGAAGGTTCTCCCTCTCCACTCTCCCCTCTCTCAAATTCTCTAACCCTAATCCTTTTCGACGCTCTAAATTTATTCCCAGAAGAAATCCTGCGAAACCCCTTAACATCACTCTCTCTAAAGCCGAAGGAACCGTCGATTCGACCAAACAGGCTCTCCCCAACTCTCCAAGTCCGCCTCCTTTTCCCACTGACCAGACGGTTTTCGTCGGCGATGAGAATGTTCCATTTGAAGGTGTAATTCAGTTTGATAAGCCCGATAGGTCTTCTCGTTTGAGCAAATGGGGCCGTGTGGCTATGCTTGCTGGTGGAGACGTATTGGCCTTGCTTTTGTTCTCCTCAATTGGACGATTCAGCCATGGTTTCCCTGTTTTTGATTTCGAGACTTTGCGCACGGCTGACCCTTTTATTGCCGGTTGGTTTCTGAGTGCTTACTTTCTCGGAGGTTATGGAGAGGATGGACGTGGTATAAATGGTTATTCCAAGGCTGTTATTGCCGCTTCTAAATCATGGGCTTTGGGAATTCCACTGGGTCTGATAATACGGGCAGCAACGTCTGGCCATATTCCGCCATATAATTTCATAGGAGTAACAATGGGAAGCACGTCTGTCTTGCTCATTGGATGGAGAGCAATACTGTATAAAGTTTTTCCAGTCAATAACAGCAAGAAGAACGATGTATATCGGCGTGGCAACCCATTTGAACTATTTGAGGTGCAGAAGCTTCTTCTCTATCAACATCCAAAATTTTCAGTGACTATCAATGCCATTCCTTACCATGAATGCTTCTTTGCAAACTCGTTATTTTCTATCTTGAACTTGATATTAAACTGGTCTTATGTGATGAGTTGGGTCGTCACACTCACAGTCGAACTGCATTTCAGTAAAATGTTAGTTGGCTTAGGATTCATTGTTGACATCATTGGTGAGAAGATGGTGATGATGGACAAACATCCTCCATTTGCTTGTATCATATTTTTCTTTAAGGGGACCTTATAA

Protein sequence

PSIFVVSRIIEVAEATGDGERGKEKMLPLSQSPAGVLPARRFSLSTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVDSTKQALPNSPSPPPFPTDQTVFVGDENVPFEGVIQFDKPDRSSRLSKWGRVAMLAGGDVLALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIAASKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTSVLLIGWRAILYKVFPVNNSKKNDVYRRGNPFELFEVQKLLLYQHPKFSVTINAIPYHECFFANSLFSILNLILNWSYVMSWVVTLTVELHFSKMLVGLGFIVDIIGEKMVMMDKHPPFACIIFFFKGTL

Homology

[Close]

BLAST of Spg025419.1 vs. NCBI nr
Match: KAA0060970.1 (uncharacterized protein E6C27_scaffold501G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 499.6 bits (1285), Expect = 2.3e-137
Identity = 259/338 (76.63%), Postives = 278/338 (82.25%), Query Frame = 0


Query: 26  MLPLSQSPAGVLPARRFSLSTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 85
           MLPL+Q+PAGVLPAR+FSLST+PSLKFSNPNPFRRSKFIPRRNP KPLNITLSKAEGTVD
Sbjct: 1   MLPLTQAPAGVLPARKFSLSTIPSLKFSNPNPFRRSKFIPRRNPTKPLNITLSKAEGTVD 60

Query: 86  STKQALPNSPSPPPFPTDQTVFVGDENVPFEGVIQFDKPDRSSRLSKWGRVAMLAGGDVL 145
           STKQAL NSP+PPPFPTDQTVFVGDENVP EGVIQFDKP+ SSRLSKWGRVA+LAGGDVL
Sbjct: 61  STKQALSNSPTPPPFPTDQTVFVGDENVPLEGVIQFDKPNTSSRLSKWGRVALLAGGDVL 120

Query: 146 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIAA 205
           ALLLFSSIGRFSHG PVFDFETLRTADPFIAGWFLSAYFLGGYG+DGRGINGYSKAVIAA
Sbjct: 121 ALLLFSSIGRFSHGLPVFDFETLRTADPFIAGWFLSAYFLGGYGDDGRGINGYSKAVIAA 180

Query: 206 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTSVLLIGWRAILYKVFPVNNSKKNDV 265
           SKSWALGIPLGL++RAATSG +PPYNFIGVTMGST+VLLIGWRAILYKVFPV+N KKNDV
Sbjct: 181 SKSWALGIPLGLLVRAATSGRLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVSNGKKNDV 240

Query: 266 YRRGNPFELFEVQKLLLYQHPKFSVTINAIPYHECFFANSLFSILNLILNWSYVMSWVVT 325
           YRRGNPFELFEV      + PK                                +  ++T
Sbjct: 241 YRRGNPFELFEV----TVECPK-------------------------------TLLCILT 299

Query: 326 LTVELHFSKMLVGLGFIVDIIGEKMVMMDKHPPFACII 364
            T    F  +L+     VDIIGEKMVMMDKHPPFACII
Sbjct: 301 RTWLRRFHYLLL----FVDIIGEKMVMMDKHPPFACII 299

[Close]

BLAST of Spg025419.1 vs. NCBI nr
Match: KAG7020620.1 (hypothetical protein SDJN02_17306 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 482.6 bits (1241), Expect = 3.0e-132
Identity = 251/337 (74.48%), Postives = 267/337 (79.23%), Query Frame = 0


Query: 26  MLPLSQSPAGVLPARRFSLSTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 85
           MLPL Q+PAGV PA +FSL+TLPSLKFSNPNPFRRSK IPRRN AKPL I LSKAEG VD
Sbjct: 1   MLPLRQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKLIPRRNAAKPLIIALSKAEGAVD 60

Query: 86  STKQALPNSPSPPPFPTDQTVFVGDENVPFEGVIQFDKPDRSSRLSKWGRVAMLAGGDVL 145
           STKQAL NSPS P  P+DQTVFVGDE+VP EGVIQFDKPDRSSR  KW  VA+LAGGDVL
Sbjct: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120

Query: 146 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIAA 205
           ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRG+NGYSKAV AA
Sbjct: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180

Query: 206 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTSVLLIGWRAILYKVFPVNNSKKNDV 265
           SKSWALGIPLGLIIRAATSGHIPPY+FIGVTMGST+VLL+GWRAI YKVFPV+N KKNDV
Sbjct: 181 SKSWALGIPLGLIIRAATSGHIPPYHFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240

Query: 266 YRRGNPFELFEVQKLLLYQHPKFSVTINAIPYHECFFANSLFSILNLILNWSYVMSWVVT 325
           YRRGNPFELFEVQKLL YQHPK ++         C F                       
Sbjct: 241 YRRGNPFELFEVQKLLHYQHPKCAI---------CLF----------------------- 300

Query: 326 LTVELHFSKMLVGLGFIVDIIGEKMVMMDKHPPFACI 363
               + F  M      +VDIIGEKMV MDKHPPFA +
Sbjct: 301 ----MPFLSMNASSQTVVDIIGEKMVTMDKHPPFAVL 301

[Close]

BLAST of Spg025419.1 vs. NCBI nr
Match: XP_022962620.1 (uncharacterized protein LOC111463015 [Cucurbita moschata] >KAG6598318.1 hypothetical protein SDJN03_08096, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029289.1 hypothetical protein SDJN02_07627 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 480.3 bits (1235), Expect = 1.5e-131
Identity = 232/252 (92.06%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 26  MLPLSQSPAGVLPARRFSLSTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 85
           MLPLSQ+PAGVLPAR+FSL+TLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD
Sbjct: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 60

Query: 86  STKQALPNSPSPPPFPTDQTVFVGDENVPFEGVIQFDKPDRSSRLSKWGRVAMLAGGDVL 145
           STKQA+ NSPSPPPFPTDQTVFVGDE+VP EGVIQFDKP+ SSRLSKWGRVA+LAGGDVL
Sbjct: 61  STKQAVSNSPSPPPFPTDQTVFVGDESVPLEGVIQFDKPNTSSRLSKWGRVALLAGGDVL 120

Query: 146 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIAA 205
           ALLLFSSIGRF+HGFPVFDFET+RTADPFIAGWFLSAYFLGGYGEDGRG+NGYSKAVIAA
Sbjct: 121 ALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIAA 180

Query: 206 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTSVLLIGWRAILYKVFPVNNSKKNDV 265
           SKSWALGIPLGL++R ATSGH+PPYNFIGVTMGST+VLLIGWRAILYKVFPVNNSKK+DV
Sbjct: 181 SKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVNNSKKSDV 240

Query: 266 YRRGNPFELFEV 278
           YRRGNPFELFE+
Sbjct: 241 YRRGNPFELFEL 252

[Close]

BLAST of Spg025419.1 vs. NCBI nr
Match: XP_023545360.1 (uncharacterized protein LOC111804800 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 478.4 bits (1230), Expect = 5.6e-131
Identity = 231/252 (91.67%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 26  MLPLSQSPAGVLPARRFSLSTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 85
           MLPLSQ+PAGVLPAR+FSL+TLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD
Sbjct: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 60

Query: 86  STKQALPNSPSPPPFPTDQTVFVGDENVPFEGVIQFDKPDRSSRLSKWGRVAMLAGGDVL 145
           STKQA+ NSPSPPPFPTDQTVFVGDE+VP EGVIQFDKP+ SSRLSKWGRVA+LAGGDVL
Sbjct: 61  STKQAVSNSPSPPPFPTDQTVFVGDESVPLEGVIQFDKPNTSSRLSKWGRVALLAGGDVL 120

Query: 146 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIAA 205
           ALLLFSSIGRF+HGFPVFDFET+RTADPFIAGWFLSAYFLGGYGEDGRG+NGYSKAVIAA
Sbjct: 121 ALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIAA 180

Query: 206 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTSVLLIGWRAILYKVFPVNNSKKNDV 265
           SKSWALGIPLGL++R ATSGH+PPYNFIGVTMGST+VLLIGWRAILYKVFPV+NSKK+DV
Sbjct: 181 SKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVDNSKKSDV 240

Query: 266 YRRGNPFELFEV 278
           YRRGNPFELFE+
Sbjct: 241 YRRGNPFELFEL 252

[Close]

BLAST of Spg025419.1 vs. NCBI nr
Match: XP_022132190.1 (uncharacterized protein LOC111005110 isoform X1 [Momordica charantia])

HSP 1 Score: 477.6 bits (1228), Expect = 9.5e-131
Identity = 234/252 (92.86%), Postives = 244/252 (96.83%), Query Frame = 0


Query: 26  MLPLSQSPAGVLPARRFSLSTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 85
           MLPLSQ+PAGVLPARRFSLST P+LKFSNPNPFRRSKFIPRRNPAKPLNI+LSKAEG+VD
Sbjct: 1   MLPLSQAPAGVLPARRFSLSTPPALKFSNPNPFRRSKFIPRRNPAKPLNISLSKAEGSVD 60

Query: 86  STKQALPNSPSPPPFPTDQTVFVGDENVPFEGVIQFDKPDRSSRLSKWGRVAMLAGGDVL 145
           STKQAL  SP+PPPFPTDQTVFVGDENVP EGVIQFDKPD SSRLSKWGRVA+LAGGDVL
Sbjct: 61  STKQALSTSPTPPPFPTDQTVFVGDENVPLEGVIQFDKPDTSSRLSKWGRVALLAGGDVL 120

Query: 146 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIAA 205
           ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIA 
Sbjct: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIAT 180

Query: 206 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTSVLLIGWRAILYKVFPVNNSKKNDV 265
           SKSWALGIPLGLIIRAATSGH+PPYNFIGVTMGST+VLLIGWRAILYKVFP N SKKNDV
Sbjct: 181 SKSWALGIPLGLIIRAATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPANASKKNDV 240

Query: 266 YRRGNPFELFEV 278
           Y+RGNPFELFE+
Sbjct: 241 YQRGNPFELFEL 252

[Close]

BLAST of Spg025419.1 vs. ExPASy TrEMBL
Match: A0A5A7V0W3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001050 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 1.1e-137
Identity = 259/338 (76.63%), Postives = 278/338 (82.25%), Query Frame = 0


Query: 26  MLPLSQSPAGVLPARRFSLSTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 85
           MLPL+Q+PAGVLPAR+FSLST+PSLKFSNPNPFRRSKFIPRRNP KPLNITLSKAEGTVD
Sbjct: 1   MLPLTQAPAGVLPARKFSLSTIPSLKFSNPNPFRRSKFIPRRNPTKPLNITLSKAEGTVD 60

Query: 86  STKQALPNSPSPPPFPTDQTVFVGDENVPFEGVIQFDKPDRSSRLSKWGRVAMLAGGDVL 145
           STKQAL NSP+PPPFPTDQTVFVGDENVP EGVIQFDKP+ SSRLSKWGRVA+LAGGDVL
Sbjct: 61  STKQALSNSPTPPPFPTDQTVFVGDENVPLEGVIQFDKPNTSSRLSKWGRVALLAGGDVL 120

Query: 146 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIAA 205
           ALLLFSSIGRFSHG PVFDFETLRTADPFIAGWFLSAYFLGGYG+DGRGINGYSKAVIAA
Sbjct: 121 ALLLFSSIGRFSHGLPVFDFETLRTADPFIAGWFLSAYFLGGYGDDGRGINGYSKAVIAA 180

Query: 206 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTSVLLIGWRAILYKVFPVNNSKKNDV 265
           SKSWALGIPLGL++RAATSG +PPYNFIGVTMGST+VLLIGWRAILYKVFPV+N KKNDV
Sbjct: 181 SKSWALGIPLGLLVRAATSGRLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVSNGKKNDV 240

Query: 266 YRRGNPFELFEVQKLLLYQHPKFSVTINAIPYHECFFANSLFSILNLILNWSYVMSWVVT 325
           YRRGNPFELFEV      + PK                                +  ++T
Sbjct: 241 YRRGNPFELFEV----TVECPK-------------------------------TLLCILT 299

Query: 326 LTVELHFSKMLVGLGFIVDIIGEKMVMMDKHPPFACII 364
            T    F  +L+     VDIIGEKMVMMDKHPPFACII
Sbjct: 301 RTWLRRFHYLLL----FVDIIGEKMVMMDKHPPFACII 299

[Close]

BLAST of Spg025419.1 vs. ExPASy TrEMBL
Match: A0A6J1HFL9 (uncharacterized protein LOC111463015 OS=Cucurbita moschata OX=3662 GN=LOC111463015 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 7.1e-132
Identity = 232/252 (92.06%), Postives = 248/252 (98.41%), Query Frame = 0


Query: 26  MLPLSQSPAGVLPARRFSLSTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 85
           MLPLSQ+PAGVLPAR+FSL+TLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD
Sbjct: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 60

Query: 86  STKQALPNSPSPPPFPTDQTVFVGDENVPFEGVIQFDKPDRSSRLSKWGRVAMLAGGDVL 145
           STKQA+ NSPSPPPFPTDQTVFVGDE+VP EGVIQFDKP+ SSRLSKWGRVA+LAGGDVL
Sbjct: 61  STKQAVSNSPSPPPFPTDQTVFVGDESVPLEGVIQFDKPNTSSRLSKWGRVALLAGGDVL 120

Query: 146 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIAA 205
           ALLLFSSIGRF+HGFPVFDFET+RTADPFIAGWFLSAYFLGGYGEDGRG+NGYSKAVIAA
Sbjct: 121 ALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIAA 180

Query: 206 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTSVLLIGWRAILYKVFPVNNSKKNDV 265
           SKSWALGIPLGL++R ATSGH+PPYNFIGVTMGST+VLLIGWRAILYKVFPVNNSKK+DV
Sbjct: 181 SKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVNNSKKSDV 240

Query: 266 YRRGNPFELFEV 278
           YRRGNPFELFE+
Sbjct: 241 YRRGNPFELFEL 252

[Close]

BLAST of Spg025419.1 vs. ExPASy TrEMBL
Match: A0A6J1BRR3 (uncharacterized protein LOC111005110 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005110 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 4.6e-131
Identity = 234/252 (92.86%), Postives = 244/252 (96.83%), Query Frame = 0


Query: 26  MLPLSQSPAGVLPARRFSLSTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 85
           MLPLSQ+PAGVLPARRFSLST P+LKFSNPNPFRRSKFIPRRNPAKPLNI+LSKAEG+VD
Sbjct: 1   MLPLSQAPAGVLPARRFSLSTPPALKFSNPNPFRRSKFIPRRNPAKPLNISLSKAEGSVD 60

Query: 86  STKQALPNSPSPPPFPTDQTVFVGDENVPFEGVIQFDKPDRSSRLSKWGRVAMLAGGDVL 145
           STKQAL  SP+PPPFPTDQTVFVGDENVP EGVIQFDKPD SSRLSKWGRVA+LAGGDVL
Sbjct: 61  STKQALSTSPTPPPFPTDQTVFVGDENVPLEGVIQFDKPDTSSRLSKWGRVALLAGGDVL 120

Query: 146 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIAA 205
           ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIA 
Sbjct: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIAT 180

Query: 206 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTSVLLIGWRAILYKVFPVNNSKKNDV 265
           SKSWALGIPLGLIIRAATSGH+PPYNFIGVTMGST+VLLIGWRAILYKVFP N SKKNDV
Sbjct: 181 SKSWALGIPLGLIIRAATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPANASKKNDV 240

Query: 266 YRRGNPFELFEV 278
           Y+RGNPFELFE+
Sbjct: 241 YQRGNPFELFEL 252

[Close]

BLAST of Spg025419.1 vs. ExPASy TrEMBL
Match: A0A1S3BB93 (uncharacterized protein LOC103487814 OS=Cucumis melo OX=3656 GN=LOC103487814 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.7e-130
Identity = 231/252 (91.67%), Postives = 244/252 (96.83%), Query Frame = 0


Query: 26  MLPLSQSPAGVLPARRFSLSTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 85
           MLPL+Q+PAGVLPARRFSLST+PSLKFSNPNPFRRSKFIPRRNP KPLNITLSKAEGTVD
Sbjct: 1   MLPLTQAPAGVLPARRFSLSTIPSLKFSNPNPFRRSKFIPRRNPTKPLNITLSKAEGTVD 60

Query: 86  STKQALPNSPSPPPFPTDQTVFVGDENVPFEGVIQFDKPDRSSRLSKWGRVAMLAGGDVL 145
           STKQAL NSP+PPPFPTDQTVFVGDENVP EGVIQFDKP+ SSRLSKWGRVA+LAGGDVL
Sbjct: 61  STKQALSNSPTPPPFPTDQTVFVGDENVPLEGVIQFDKPNTSSRLSKWGRVALLAGGDVL 120

Query: 146 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIAA 205
           ALLLFSSIGRFSHG PVFDFETLRTADPFIAGWFLSAYFLGGYG+DGRGINGYSKAVIAA
Sbjct: 121 ALLLFSSIGRFSHGLPVFDFETLRTADPFIAGWFLSAYFLGGYGDDGRGINGYSKAVIAA 180

Query: 206 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTSVLLIGWRAILYKVFPVNNSKKNDV 265
           SKSWALGIPLGL++RAATSG +PPY FIGVTMGST+VLLIGWRAILYKVFPV+N KKNDV
Sbjct: 181 SKSWALGIPLGLLVRAATSGRLPPYTFIGVTMGSTAVLLIGWRAILYKVFPVSNGKKNDV 240

Query: 266 YRRGNPFELFEV 278
           YRRGNPFELFE+
Sbjct: 241 YRRGNPFELFEL 252

[Close]

BLAST of Spg025419.1 vs. ExPASy TrEMBL
Match: A0A6J1K997 (uncharacterized protein LOC111492268 OS=Cucurbita maxima OX=3661 GN=LOC111492268 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 3.0e-130
Identity = 230/252 (91.27%), Postives = 247/252 (98.02%), Query Frame = 0


Query: 26  MLPLSQSPAGVLPARRFSLSTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 85
           MLPLSQ+PAGVLPAR+FSL+TLPSLKFSNPNPFRRSKFIPRRNP+KPLNITLSKAEGTVD
Sbjct: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNPFRRSKFIPRRNPSKPLNITLSKAEGTVD 60

Query: 86  STKQALPNSPSPPPFPTDQTVFVGDENVPFEGVIQFDKPDRSSRLSKWGRVAMLAGGDVL 145
           STKQA+ NSPSPPPFPTDQTVFVGDE+VP EGVI+FDKP+ SSRLSKWGRVA+LAGGDVL
Sbjct: 61  STKQAVSNSPSPPPFPTDQTVFVGDESVPLEGVIRFDKPNTSSRLSKWGRVALLAGGDVL 120

Query: 146 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKAVIAA 205
           ALLLFSSIGRF+HGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRG+NGYSKAVIAA
Sbjct: 121 ALLLFSSIGRFTHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIAA 180

Query: 206 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTSVLLIGWRAILYKVFPVNNSKKNDV 265
           SKSWALGIPLGL++R ATSGH+ PYNFIGVTMGST+VLLIGWRAILYKVFPVNNSKK+DV
Sbjct: 181 SKSWALGIPLGLLVRVATSGHLLPYNFIGVTMGSTAVLLIGWRAILYKVFPVNNSKKSDV 240

Query: 266 YRRGNPFELFEV 278
           YRRGNPFELFE+
Sbjct: 241 YRRGNPFELFEL 252

[Close]

BLAST of Spg025419.1 vs. TAIR 10
Match: AT1G44920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 282.7 bits (722), Expect = 4.2e-76
Identity = 151/261 (57.85%), Postives = 194/261 (74.33%), Query Frame = 0


Query: 25  KMLPLSQSPAGVLPARRFSLSTLPSLKFSNPNPFRRSKFIPRRNPAKP-LNITLSKAEGT 84
           +ML L ++P G + A RF   + PS  FS+P+ +      P  + ++P + + LS  +G+
Sbjct: 2   RMLVL-RTPTGPVSAVRFITKSKPS-PFSSPDSWLLP--APNTHRSRPRVVLALSNPDGS 61

Query: 85  VDSTKQALPNSPSPPPFPTDQTVFVGDENVPFEGVIQFDKPD--RSSRLSKWGRVAMLAG 144
           V+S       S S  P   D+TVFVG +NVP EGVIQFDKP    SS ++KWGRVA+LAG
Sbjct: 62  VNSKPS---TSASQIPSSGDETVFVGQDNVPLEGVIQFDKPSSTSSSNITKWGRVALLAG 121

Query: 145 GDVLALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGINGYSKA 204
           GDVLALL+FS+IGRFSHGFPVF  +TL TADPFIAGWFLSAYFLGGY E+GRG+ G SKA
Sbjct: 122 GDVLALLIFSAIGRFSHGFPVFSLDTLHTADPFIAGWFLSAYFLGGYAEEGRGMKGKSKA 181

Query: 205 VIAASKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTSVLLIGWRAILYKVFPVNNSK 264
           V+AA+KSW +G PLG+IIR+A+SGHIP Y+F+ VTMGST+VLLIGWRA+L+ V P  + K
Sbjct: 182 VVAAAKSWIVGTPLGIIIRSASSGHIPAYSFVLVTMGSTAVLLIGWRALLFSVLPTESKK 241

Query: 265 KNDVYRRGNPFELFEVQKLLL 283
           K+D YR+G+ FELFE+   L+
Sbjct: 242 KDDTYRKGSAFELFELLTSLI 255

The following BLAST results are available for this feature:

BLAST of Spg025419.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060970.1	2.3e-137	76.63	uncharacterized protein E6C27_scaffold501G001050 [Cucumis melo var. makuwa]	[more]
KAG7020620.1	3.0e-132	74.48	hypothetical protein SDJN02_17306 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022962620.1	1.5e-131	92.06	uncharacterized protein LOC111463015 [Cucurbita moschata] >KAG6598318.1 hypothet...	[more]
XP_023545360.1	5.6e-131	91.67	uncharacterized protein LOC111804800 [Cucurbita pepo subsp. pepo]	[more]
XP_022132190.1	9.5e-131	92.86	uncharacterized protein LOC111005110 isoform X1 [Momordica charantia]	[more]

BLAST of Spg025419.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg025419.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V0W3	1.1e-137	76.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1HFL9	7.1e-132	92.06	uncharacterized protein LOC111463015 OS=Cucurbita moschata OX=3662 GN=LOC1114630...	[more]
A0A6J1BRR3	4.6e-131	92.86	uncharacterized protein LOC111005110 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3BB93	1.7e-130	91.67	uncharacterized protein LOC103487814 OS=Cucumis melo OX=3656 GN=LOC103487814 PE=...	[more]
A0A6J1K997	3.0e-130	91.27	uncharacterized protein LOC111492268 OS=Cucurbita maxima OX=3661 GN=LOC111492268...	[more]

BLAST of Spg025419.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44920.1	4.2e-76	57.85	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021414	Protein of unknown function DUF3054	PFAM	PF11255	DUF3054	coord: 141..250 e-value: 7.1E-24 score: 84.5
None	No IPR available	PANTHER	PTHR35283	T12C22.21 PROTEIN	coord: 26..281

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spg025419	Spg025419	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg025419.1-cds	Spg025419.1-cds-scaffold13:40431885..40432285	CDS
Spg025419.1-cds	Spg025419.1-cds-scaffold13:40432363..40432490	CDS
Spg025419.1-cds	Spg025419.1-cds-scaffold13:40432599..40432711	CDS
Spg025419.1-cds	Spg025419.1-cds-scaffold13:40433548..40433929	CDS
Spg025419.1-cds	Spg025419.1-cds-scaffold13:40434126..40434214	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spg025419.1-three_prime_utr	Spg025419.1-three_prime_utr-scaffold13:40434215..40434571	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spg025419.1	Spg025419.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane